BLASTP2 Result
of
back to BLAST2
BLASTP 2.0MP-WashU [16-Dec-1999] [irix6-r10k-L64 23:35:48 16-Dec-1999]
Copyright (C) 1996-1999 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-1999) http://blast.wustl.edu
Query= query_sequence
(132 letters)
Database: nrdb Release 15.Sep.2002
970,006 sequences; 307,325,055 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Query sequence and locally-aligned HSPs from database sequences
0 30 60 90 120
| | | | | |132
query_sequence | __________________________________________________
^ v sptrembl|Q9VZ71|Q9 | __________________________________________________
^ v sptrembl|Q9CZR4|Q9 | __________________________________________________
^ v sptrembl|Q9R1Q7|Q9 | ________________________________________________
^ v swissnew|P47987|PL | _________________________________________________
^ v trembl|U13617|RN13 | _________________________________________________
^ v swissnew|Q9DCU2|PL | _________________________________________________
^ v sptrembl|Q95MN6|Q9 | ________________________________________________
^ v trembl|X76679|HSMA | ____________________________________
^ v sptremblnew|AAH288 | _________________________________
^ v swissnew|Q9Y342|PL | _________________________________________________
^ v sptrembl|Q99LJ5|Q9 | _______________________________________________
^ v swiss|O09198|MAL_M | _________________________________________________
^ v sptrembl|Q9VYX8|Q9 | __________________________________________________
^ v sptrembl|Q96MX0|Q9 | _____________________________________
^ v swiss|Q04941|A4P_H | ________________________________________________
^ v swiss|Q28296|MAL_C | _________________________________________________
^ v sptrembl|Q9D165|Q9 | __________________________________________
^ v swissnew|P21145|MA | _________________________________________________
^ v swiss|Q64349|MAL_R | _________________________________________________
^ v sptrembl|Q9ESD6|Q9 | ___________________________________________
^ v sptrembl|O01539|O0 | __________________________________________________
^ v sptrembl|Q95302|Q9 | _______________________________
^ v sptrembl|Q95ZR6|Q9 | ________________________________________
^ v sptrembl|Q9XVL1|Q9 | ________________________________________
^ v sptrembl|Q96FZ5|Q9 | ______________________________________________
^ v sptrembl|O81707|O8 | __________ ______
^ v sptrembl|Q946W9|Q9 | __________ ______
^ v swissnew|Q969L2|MA | ___________________________________
^ v sptrembl|Q8ZXJ6|Q8 | _____________________
^ v sptremblnew|AAM702 | ______________
^ v sptrembl|Q9W4B6|Q9 | ____________________________________________
^ v swiss|O43760|SNG2_ | __________________________________
^ v sptrembl|Q9V6U3|Q9 | _________________________________
^ v sptremblnew|AAN005 | __________________________________
^ v swissnew|Q16625|OC | ________ _____________________________________
^ v trembl|AJ002310|HS | _____________________________
^ v swissnew|O54701|NK | __________________________________
^ v sptrembl|Q9GYN1|Q9 | _________________________________
^ v sptremblnew|AAH298 | ________ ___________________________________
^ v sptrembl|O44798|O4 | _____________________________________
^ v sptrembl|P90471|P9 | ___________________________
^ v sptrembl|O34610|O3 | _____________________________
^ v sptrembl|Q9K7Z4|Q9 | ______________________________
^ v sptremblnew|BAC042 | _________________________________
^ v sptrembl|Q973H6|Q9 | ___________________________________
^ v swissnew|P34959|QO | ____________________________________
^ v swissnew|Q96S97|MY | _________________________________
^ v trembl|X73124|BSGE | ____________________________________
^ v sptrembl|Q8W9T8|Q8 | ____________________
^ v swiss|O54980|SNG2_ | __________________________________
Alignments:
WARNING: Descriptions of 43 database sequences were not reported due to the
limiting value of parameter V = 50.
^ = sptrembl|Q9VZ71|Q9VZ71 CG15211 protein
(RE01453p).//:trembl|AE003484|AE003484_1 gene: "CG15211";
Drosophila melanogaster genomic scaffold 142000013386053 section 1
of 30, complete sequence. //:trembl|AY069765|AY069765_1 gene:
"CG15211"; product: "RE01453p"; Drosophila melanogaster RE01453
full length cDNA. //:gp|AY069765|17862866 RE01453p [Drosophila
melanogaster]//:gp|AE003484|7292555 CG15211 gene product
[Drosophila melanogaster]//:gpnew|AE003484|7292555 CG15211-PA
[Drosophila melanogaster]
Length = 177
0 40 80 120 160
| | | | | |177
sptrembl|Q9VZ71|Q9VZ7 | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 659 (237.0 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA
Sbjct: 43 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 102
Query: 61 LNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAA 120
LNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAA
Sbjct: 103 LNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAA 162
Query: 121 GTYFLFLAHRSG 132
GTYFLFLAHRSG
Sbjct: 163 GTYFLFLAHRSG 174
^ = sptrembl|Q9CZR4|Q9CZR4 2700018N07Rik
protein.//:sptremblnew|AAH27554|AAH27554 RIKEN cDNA 2700018N07
gene.//:tremblnew|BC027554|BC027554_1 product: "RIKEN cDNA
2700018N07 gene"; Mus musculus, RIKEN cDNA 2700018N07 gene, clone
MGC:41386 IMAGE:1382818, mRNA, complete cds.
//:trembl|AK012262|AK012262_1 Mus musculus 11 days embryo whole
body cDNA, RIKEN full-length enriched library,
clone:2700018N07:homolog to PLASMOLIPIN, full insert sequence.
//:trembl|BC027554|BC027554_1 product: "RIKEN cDNA 2700018N07
gene"; Mus musculus, RIKEN cDNA 2700018N07 gene, clone MGC:41386
IMAGE:1382818, mRNA, complete cds. //:gp|BC027554|20380453 RIKEN
cDNA 2700018N07 gene [Mus musculus]//:gp|AK012262|12848892 data
source:SPTR, source key:P47987, evidence:ISS~homolog to
PLASMOLIPIN~putative [Mus musculus]
Length = 173
0 40 80 120 160
| | | | | |173
sptrembl|Q9CZR4|Q9CZR | __________________________________________________
Local hits (HSPs) | ______________________________________
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/135 (28%), Positives = 58/135 (42%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPP---LASATSFFMFVIVISFIINILLIAAYFLGI 57
+ RT PG++ + E VLG++ L A A + MFV V +++ + + Y + +
Sbjct: 36 FLRTPPGLLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIVY-ITL 94
Query: 58 REALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWS-DATGKGSGSNTAAGVFGLFNFL 116
V W L +LYF IV + S + G S A+ F +
Sbjct: 95 TYTRIPQVPWTTVGLCFNGSAFVLYFSAAIVDASSVSPEKEGHNFNSWAASSFFAFLVTI 154
Query: 117 AYAAGTYFLFLAHRS 131
YA TYF F+A RS
Sbjct: 155 CYAGNTYFSFIAWRS 169
^ = sptrembl|Q9R1Q7|Q9R1Q7 Proteolipid protein
2.//:tremblnew|AK011282|AK011282_1 gene: "Plp2"; Mus musculus 10
days embryo whole body cDNA, RIKEN full-length enriched library,
clone:2610002D24:proteolipid protein 2, full insert sequence.
//:trembl|AK003522|AK003522_1 gene: "Plp2"; Mus musculus 18 days
embryo whole body cDNA, RIKEN full-length enriched library,
clone:1110007B11:proteolipid protein 2, full insert sequence.
//:trembl|AK011282|AK011282_1 gene: "Plp2"; Mus musculus 10 days
embryo whole body cDNA, RIKEN full-length enriched library,
clone:2610002D24:proteolipid protein 2, full insert sequence.
//:trembl|AB031292|AB031292_1 gene: "Plp2"; product: "proteolipid
protein 2"; Mus musculus Plp2 mRNA for proteolipid protein 2,
complete cds. //:gp|AB031292|5771451 proteolipid protein 2 [Mus
musculus]//:gp|AK011282|12847302 data source:MGD, source
key:MGI:1298382, evidence:ISS~proteolipid protein 2~putative [Mus
musculus]//:gp|AK003522|12834239 data source:MGD, source
key:MGI:1298382, evidence:ISS~proteolipid protein 2~putative [Mus
musculus]
Length = 152
0 30 60 90 120 150
| | | | | |152
sptrembl|Q9R1Q7|Q9R1Q | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 122 (48.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/126 (28%), Positives = 58/126 (46%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
+ RT GI+ E +L C+ + AS TS + + VI I +L+ Y +
Sbjct: 19 FSRTKKGILLFAEIIL---CLVILICFSASTTSAYSSLSVIEMICAAVLLVFYTCDLHSK 75
Query: 61 LNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAA 120
++ +NW +++ + + T+LY I IV L G+GS S AG+ GL L +
Sbjct: 76 ISF-INWPWTDFFRSLIATILYLITSIVVLVE-----GRGS-SRVVAGILGLLATLLFGY 128
Query: 121 GTYFLF 126
Y F
Sbjct: 129 DAYITF 134
^ = swissnew|P47987|PLLP_RAT Plasmolipin.//:swiss|P47987|PLLP_RAT
Plasmolipin.//:trembl|Z49858|RNPLLIPIN_1 product: "plasmolipin";
Rattus norvegicus mRNA for plasmolipin //:gp|Z49858|1143540
plasmolipin [Rattus norvegicus]
Length = 182
0 40 80 120 160
| | | | | |182
swissnew|P47987|PLLP_ | __________________________________________________
Local hits (HSPs) | ____________________________________
Score = 118 (46.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAP-P--LASATSFFMFVIVISFIINILLIAAYFLGI 57
+ R+ G++ +++ VLG++ AL A P L A + MFV V +++ I+ Y +
Sbjct: 32 FVRSALGVLALLQLVLGLLVWALIADTPYHLYPAYGWVMFVAVFLWLVTIVFFIIYLFQL 91
Query: 58 REALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGS---GSNTAAGVFGLFN 114
L + V W L+ T+LY F+ A + +GS +AA F
Sbjct: 92 HMKLYM-VPWPLVLLVFFVAATVLYITAFVACAAAVDLTSLRGSRPYNQRSAASFFACLV 150
Query: 115 FLAYAAGTYFLFLAHR 130
+AY +F F A R
Sbjct: 151 MIAYGLSAFFSFQAWR 166
^ = trembl|U13617|RN13617_1 product: "plasmolipin"; Rattus norvegicus
Sprague-Dawley plasmolipin mRNA, complete cds.
//:pironly|A55046|A55046 plasmolipin - rat//:gp|U13617|532800
plasmolipin [Rattus norvegicus]
Length = 157
0 40 80 120
| | | | |157
trembl|U13617|RN13617 | __________________________________________________
Local hits (HSPs) | __________________________________________
Score = 118 (46.6 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAP-P--LASATSFFMFVIVISFIINILLIAAYFLGI 57
+ R+ G++ +++ VLG++ AL A P L A + MFV V +++ I+ Y +
Sbjct: 7 FVRSALGVLALLQLVLGLLVWALIADTPYHLYPAYGWVMFVAVFLWLVTIVFFIIYLFQL 66
Query: 58 REALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGS---GSNTAAGVFGLFN 114
L + V W L+ T+LY F+ A + +GS +AA F
Sbjct: 67 HMKLYM-VPWPLVLLVFFVAATVLYITAFVACAAAVDLTSLRGSRPYNQRSAASFFACLV 125
Query: 115 FLAYAAGTYFLFLAHR 130
+AY +F F A R
Sbjct: 126 MIAYGLSAFFSFQAWR 141
^ = swissnew|Q9DCU2|PLLP_MOUSE Plasmolipin.//:tremblnew|BC024534|BC024534_1
product: "RIKEN cDNA 0610010I06 gene"; Mus musculus, RIKEN cDNA
0610010I06 gene, clone MGC:37565 IMAGE:4987882, mRNA, complete cds.
//:trembl|AK002477|AK002477_1 Mus musculus adult male kidney cDNA,
RIKEN full-length enriched library, clone:0610010I06:homolog to
PLASMOLIPIN, full insert sequence. //:trembl|BC024534|BC024534_1
product: "RIKEN cDNA 0610010I06 gene"; Mus musculus, RIKEN cDNA
0610010I06 gene, clone MGC:37565 IMAGE:4987882, mRNA, complete cds.
//:trembl|AJ298129|MMU298129_1 gene: "Plapi"; product:
"plasmolipin"; Mus musculus partial Plapi gene for plasmolipin,
exon 1 and joined CDS //:gp|AJ298129|17066781 plasmolipin [Mus
musculus]//:gp|BC024534|19353611 RIKEN cDNA 0610010I06 gene [Mus
musculus]//:gp|AK002477|12832490 data source:SPTR, source
key:Q9Y342, evidence:ISS~homolog to PLASMOLIPIN~putative [Mus
musculus]
Length = 182
0 40 80 120 160
| | | | | |182
swissnew|Q9DCU2|PLLP_ | __________________________________________________
Local hits (HSPs) | ____________________________________
Score = 117 (46.2 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAP-P--LASATSFFMFVIVISFIINILLIAAYFLGI 57
+ R+ G++ +++ LG++ AL A P L A + MFV V +++ I+ Y +
Sbjct: 32 FVRSALGVLALLQLALGLLVWALIADTPYHLYPAYGWVMFVAVFLWLVTIVFFIIYLFQL 91
Query: 58 REALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGS---GSNTAAGVFGLFN 114
L + V W LI T+LY FI A + +GS +AA F
Sbjct: 92 HMKLYM-VPWPLVLLIFFVAATVLYITAFIACAAAVDLTSLRGSRPYNQRSAASFFACLV 150
Query: 115 FLAYAAGTYFLFLAHR 130
+AY +F F A R
Sbjct: 151 MIAYGVSAFFSFQAWR 166
^ = sptrembl|Q95MN6|Q95MN6 Proteolipid protein 2.//:trembl|AF314164|AF314164_1
gene: "plp2"; product: "proteolipid protein 2"; Oryctolagus
cuniculus proteolipid protein 2 (plp2) mRNA, complete cds.
//:gp|AF314164|14701788 proteolipid protein 2 [Oryctolagus
cuniculus]
Length = 152
0 30 60 90 120 150
| | | | | |152
sptrembl|Q95MN6|Q95MN | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 108 (43.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
+ RT GI+ + E +L ++ + ++ TS + + V+ ++ I+ Y +
Sbjct: 19 FSRTRKGILLLAEIILCLVILIC----FSAGTSGYSSLSVVEMVLAIVFFVIYMCDLHTR 74
Query: 61 LNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAA 120
+NW +S+ T + +LY I I L +G+ S AAGV GL +
Sbjct: 75 APF-INWPWSDFFRTLIAAILYLITSIFVLVE------RGNHSKIAAGVLGLLATCLFGY 127
Query: 121 GTYFLF 126
YF F
Sbjct: 128 DAYFTF 133
^ = trembl|X76679|HSMALB_1 gene: "MAL-b"; H.sapiens MAL-b mRNA
//:gp|X76679|435480 MAL-b [Homo sapiens]
Length = 111
0 30 60 90
| | | | |111
trembl|X76679|HSMALB_ | __________________________________________________
Local hits (HSPs) | _________________________________________
Score = 108 (43.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 2 FRTIPGIIKIVEFVLGIICMALAAPPLAS---ATSFFMFVIVISFIINILLIAAYFLGIR 58
F T+P ++ I EF+ G + L A L + MFV V F+ LI Y +G
Sbjct: 19 FTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIG-- 76
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDA 96
A +W+ L+ + + TLLY + + L RW +
Sbjct: 77 -AHGGETSWV--TLVFSYIATLLYVVHAVFSLIRWKSS 111
^ = sptremblnew|AAH28852|AAH28852 Similar to RIKEN cDNA 2810051A14
gene.//:tremblnew|BC028852|BC028852_1 product: "similar to RIKEN
cDNA 2810051A14 gene"; Mus musculus, similar to RIKEN cDNA
2810051A14 gene, clone MGC:30490 IMAGE:4206772, mRNA, complete cds.
//:gp|BC028852|22137373 similar to RIKEN cDNA 2810051A14 gene [Mus
musculus]
Length = 133
0 30 60 90 120
| | | | | |133
sptremblnew|AAH28852| | __________________________________________________
Local hits (HSPs) | _______________________________
Score = 107 (42.7 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 34 FFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQLARW 93
FF FV +F++ +L+ + L + + +NW ++L+ T + T +FI IV LA
Sbjct: 11 FFEFVSCSAFVVTGVLLILFSLNLHMRIP-QINWNLTDLVNTGLSTFFFFIASIV-LAAL 68
Query: 94 SDATGKGSGSNTAAGVFGLFNFLAYAAGTY 123
+ TG + AA +FG AYA T+
Sbjct: 69 NHKTG----AEIAAVIFGFLATAAYAVSTF 94
^ = swissnew|Q9Y342|PLLP_HUMAN Plasmolipin.//:swiss|Q9Y342|PLLP_HUMAN
Plasmolipin.//:trembl|AF137386|AF137386_1 product: "plasmolipin";
Homo sapiens plasmolipin mRNA, complete cds.
//:trembl|BC002760|BC002760_1 product: "plasmolipin"; Homo
sapiens, plasmolipin, clone MGC:3357 IMAGE:3633345, mRNA, complete
cds. //:gp|AF137386|4927226 plasmolipin [Homo
sapiens]//:gp|BC002760|12803839 plasmolipin [Homo sapiens]
Length = 182
0 40 80 120 160
| | | | | |182
swissnew|Q9Y342|PLLP_ | __________________________________________________
Local hits (HSPs) | ____________________________________
Score = 107 (42.7 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 37/136 (27%), Positives = 60/136 (44%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAP-P--LASATSFFMFVIVISFIINILLIAAYFLGI 57
+ R+ G + +++ VLG++ AL A P L A + MFV V +++ I+L Y +
Sbjct: 32 FVRSRLGALMLLQLVLGLLVWALIADTPYHLYPAYGWVMFVAVFLWLVTIVLFNLYLFQL 91
Query: 58 REALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGS---GSNTAAGVFGLFN 114
L + V W +I T+LY FI A + +G+ AA F
Sbjct: 92 HMKLYM-VPWPLVLMIFNISATVLYITAFIACSAAVDLTSLRGTRPYNQRAAASFFACLV 150
Query: 115 FLAYAAGTYFLFLAHR 130
+AY +F + A R
Sbjct: 151 MIAYGVSAFFSYQAWR 166
^ = sptrembl|Q99LJ5|Q99LJ5 RIKEN cDNA 9430096L06
gene.//:tremblnew|BC003230|BC003230_1 product: "RIKEN cDNA
9430096L06 gene"; Mus musculus, RIKEN cDNA 9430096L06 gene, clone
MGC:7225 IMAGE:3483351, mRNA, complete cds.
//:trembl|BC003230|BC003230_1 product: "RIKEN cDNA 9430096L06
gene"; Mus musculus, RIKEN cDNA 9430096L06 gene, clone MGC:7225
IMAGE:3483351, mRNA, complete cds. //:gp|BC003230|13096862 RIKEN
cDNA 9430096L06 gene [Mus musculus]
Length = 184
0 40 80 120 160
| | | | | |184
sptrembl|Q99LJ5|Q99LJ | __________________________________________________
Local hits (HSPs) | ___________________________________
Score = 106 (42.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 3 RTIPGIIKIVEFVLGIICMALAAPPLA-SATSFFMFVI-VIS----FI-INIL--LIAAY 53
RT+PG+ ++ +C LA S SF F+ V+S F+ + +L L+A Y
Sbjct: 22 RTVPGLRALLP-ARAFLCSLKGRLLLAESGLSFITFICYVVSSASAFLTVPLLEFLLAVY 80
Query: 54 FLGIREALNV-----AVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAG 108
FL +A+ + + W + + L+YF+ I +A++SD G+ AAG
Sbjct: 81 FL-FADAMQLNDKWQGLCWPMMDFLRCVTAALIYFVISITAVAKYSD------GAYKAAG 133
Query: 109 VFGLFNFLAYAAGTYFLF 126
VFG F + +A Y +F
Sbjct: 134 VFGFFATIVFAIDFYLIF 151
^ = swiss|O09198|MAL_MOUSE Myelin and lymphocyte protein (T-lymphocyte
maturation-associated protein).//:sptremblnew|BAB23430|BAB23430 Mal
protein.//:tremblnew|BC006826|BC006826_1 product: "myelin and
lymphocyte protein; T-cell differentiation protein"; Mus musculus,
myelin and lymphocyte protein; T-cell differentiation protein,
clone MGC:11470 IMAGE:3597561, mRNA, complete cds.
//:trembl|AK004639|AK004639_1 gene: "Mal"; Mus musculus adult male
lung cDNA, RIKEN full-length enriched library,
clone:1200007K21:myelin and lymphocyte protein; T-cell
differentiation protein, full insert sequence.
//:trembl|BC006826|BC006826_1 product: "myelin and lymphocyte
protein; T-cell differentiation protein"; Mus musculus, myelin and
lymphocyte protein; T-cell differentiation protein, clone MGC:11470
IMAGE:3597561, mRNA, complete cds. //:trembl|Y07627|MMMALCDS_1
gene: "MAL"; M.musculus MAL gene, exon 1 & joined CDS
//:trembl|Y07626|MMMALMRNA_1 gene: "MAL"; M.musculus mRNA for MAL
protein //:trembl|Y07812|MMMALPROT_1 gene: "MAL"; product: "MAL
protein"; M.musculus mRNA for MAL protein //:gp|Y07626|1771299 MAL
[Mus musculus]//:gp|Y07812|1771301 MAL protein [Mus
musculus]//:gp|Y07627|1771294 MAL [Mus
musculus]//:gp|BC006826|13905082 myelin and lymphocyte protein;
T-cell differentiation protein [Mus
musculus]//:gp|AK004639|12835949 data source:MGD, source
key:MGI:892970, evidence:ISS~myelin and lymphocyte protein; T-cell
differentiation protein~putative [Mus musculus]
Length = 153
0 30 60 90 120 150
| | | | | |153
swiss|O09198|MAL_MOUS | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 101 (40.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/137 (28%), Positives = 58/137 (42%)
Query: 2 FRTIPGIIKIVEFVLG-IICMALAAP--PLASATSFFMFVIVISFIINILLIAAYFLGIR 58
F T P ++ + EFV G ++ + +A+ PL A + MFV V F+ L+ Y +G
Sbjct: 19 FTTFPDLLFVCEFVFGGLVWILIASSLVPLPLAQGWVMFVSVFCFVATTSLMILYIIGTH 78
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGFIVQ-LARWS--DA-TGKGSGSNTAAGVFGLFN 114
+WI + V L Y +++ LA S D T K N AA VF
Sbjct: 79 GG---ETSWITLDAAYHCVAALFYLSASVLEALATISMFDGFTYKHYHENIAAVVFAYVV 135
Query: 115 FLAYAAGTYFLFLAHRS 131
L Y F + +S
Sbjct: 136 TLIYVVHAVFSLIRWKS 152
^ = sptrembl|Q9VYX8|Q9VYX8 CG1572 protein.//:sptremblnew|AAM50229|AAM50229
LD04844p.//:tremblnew|AY119575|AY119575_1 gene: "CG1572"; product:
"LD04844p"; Drosophila melanogaster LD04844 full insert cDNA.
//:trembl|AE003486|AE003486_18 gene: "CG1572"; Drosophila
melanogaster genomic scaffold 142000013386053 section 3 of 30,
complete sequence. //:gp|AY119575|21429020 LD04844p [Drosophila
melanogaster]//:gp|AE003486|7292657 CG1572 gene product [Drosophila
melanogaster]//:gpnew|AE003486|7292657 CG1572-PA [Drosophila
melanogaster]//:gpnew|AE003486|22833095 CG1572-PB [Drosophila
melanogaster]
Length = 160
0 40 80 120 160
| | | | |160
sptrembl|Q9VYX8|Q9VYX | __________________________________________________
Local hits (HSPs) | ________________________________________
Score = 99 (39.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 35/138 (25%), Positives = 59/138 (42%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFM-------FVIVISFIINILLIAAY 53
Y +T PGI+K+ E ++G + + A +F +++ ++F+I +
Sbjct: 26 YLKTFPGILKLFELIIGASIVGILAFNYQDYHRYFYGQQDLFHYLMAVTFMIGTFCLLLA 85
Query: 54 FLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLF 113
L + I+ ELI +V +L + + L + D + AAGV GL
Sbjct: 86 CLTSLSTGGIIAKTIY-ELIYHSVAAILILVSSTILLLKLRDVK---HDAYMAAGVLGLV 141
Query: 114 NFLAYAAGTYFLFLAHRS 131
N + Y FLAHRS
Sbjct: 142 NAVLYFISA---FLAHRS 156
^ = sptrembl|Q96MX0|Q96MX0 CDNA FLJ31762 fis, clone NT2RI2007754, weakly similar
to intestinal membrane A4 protein.//:tremblnew|AK056324|AK056324_1
unnamed ORF; Homo sapiens cDNA FLJ31762 fis, clone NT2RI2007754,
weakly similar to INTESTINAL MEMBRANE A4 PROTEIN.
//:trembl|AK056324|AK056324_1 unnamed ORF; Homo sapiens cDNA
FLJ31762 fis, clone NT2RI2007754, weakly similar to INTESTINAL
MEMBRANE A4 PROTEIN. //:gp|AK056324|16551694 unnamed protein
product [Homo sapiens]
Length = 182
0 40 80 120 160
| | | | | |182
sptrembl|Q96MX0|Q96MX | __________________________________________________
Local hits (HSPs) | _________________________
Score = 100 (40.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 28 LASATSFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFI 87
+AS+ S F+ ++ F++ + + A + + + + W + + L+YF I
Sbjct: 60 VASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQ-GLCWPMMDFLRCVTAALIYFAISI 118
Query: 88 VQLARWSDATGKGSGSNTAAGVFGLFNFLAYAAGTYFLF 126
+A++SD G++ AAGVFG F + +A Y +F
Sbjct: 119 TAIAKYSD------GASKAAGVFGFFATIVFATDFYLIF 151
^ = swiss|Q04941|A4P_HUMAN Intestinal membrane A4 protein
(Differentiation-dependent protein A4) (Proteolipid protein
2).//:trembl|AF196779|AF196779_7 gene: "A4"; Homo sapiens
transcription factor IGHM enhancer 3, JM11 protein, JM4 protein,
JM5 protein, T54 protein, JM10 protein, A4
differentiation-dependent protein, triple LIM domain protein 6, and
synaptophysin genes, complete cds; and L-type calcium channel
alpha-1 subunit gene, partial cds, complete sequence.
//:trembl|L09604|HSA4_1 product: "A4 protein"; Homo sapiens
differentiation-dependent A4 protein mRNA, complete cds.
//:trembl|U93305|U93305_1 gene: "A4"; product: "A4
differentiation-dependent protein"; Homo sapiens A4
differentiation-dependent protein (A4), triple LIM domain protein
(LMO6), and synaptophysin (SYP) genes, complete cds; and calcium
channel alpha-1 subunit (CACNA1F) gene, partial cds.
//:gp|L09604|177900 A4 protein [Homo sapiens]//:gp|AF196779|6180174
A4 differentiation-dependent protein [Homo
sapiens]//:gp|U93305|2707599 A4 differentiation-dependent protein
[Homo sapiens]
Length = 152
0 30 60 90 120 150
| | | | | |152
swiss|Q04941|A4P_HUMA | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 98 (39.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 30/126 (23%), Positives = 53/126 (42%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
+ RT GI+ E +L ++ + +++T + + VI I+ + Y +
Sbjct: 19 FSRTRKGILLFAEIILCLVILIC----FSASTPGYSSLSVIEMILAAIFFVVYMCDLHTK 74
Query: 61 LNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAA 120
+ +NW +S+ T + +LY I IV L +G+ S AGV GL +
Sbjct: 75 IPF-INWPWSDFFRTLIAAILYLITSIVVLVE------RGNHSKIVAGVLGLIATCLFGY 127
Query: 121 GTYFLF 126
Y F
Sbjct: 128 DAYVTF 133
^ = swiss|Q28296|MAL_CANFA Myelin and lymphocyte protein (T-lymphocyte
maturation-associated protein) (VIP17
proteolipid).//:trembl|X92505|CFMAL_1 product: "VIP17/MAL
proteolipid"; C.familiaris mRNA for VIP17/MAL proteolipid
//:pironly|S68406|S68406 vesicular integral membrane protein VIP17
- dog//:gp|X92505|1054713 VIP17/MAL proteolipid [Canis familiaris]
Length = 153
0 30 60 90 120 150
| | | | | |153
swiss|Q28296|MAL_CANF | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 92 (37.4 bits), Expect = 0.0020, P = 0.0020
Identities = 33/137 (24%), Positives = 56/137 (40%)
Query: 2 FRTIPGIIKIVEFVLG-IICMALAAP--PLASATSFFMFVIVISFIINILLIAAYFLGIR 58
F T P ++ I EF+ G ++ + +A+ P+ + MFV V F+ L+ Y +G
Sbjct: 19 FTTFPDLLFIFEFIFGGLVWILIASSLVPIPLVQGWVMFVSVFCFMATTALLVLYIIGAH 78
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGFIVQ-LARWSDATG---KGSGSNTAAGVFGLFN 114
N +W+ + + L Y +++ LA G K N +A VF
Sbjct: 79 GGEN---SWVTLDAAYHCIAALFYLSASVLEALATIGMQEGYTYKQYHENISAVVFSYVA 135
Query: 115 FLAYAAGTYFLFLAHRS 131
L Y F + +S
Sbjct: 136 TLLYVVHAVFSLIRWKS 152
^ = sptrembl|Q9D165|Q9D165 9430096L06Rik
protein.//:tremblnew|AK003882|AK003882_1 Mus musculus 18 days
embryo whole body cDNA, RIKEN full-length enriched library,
clone:1110021A20:hypothetical protein, full insert sequence.
//:trembl|AK003882|AK003882_1 Mus musculus 18 days embryo whole
body cDNA, RIKEN full-length enriched library,
clone:1110021A20:hypothetical protein, full insert sequence.
//:gp|AK003882|12834820 evidence:NAS~hypothetical protein~putative
[Mus musculus]
Length = 145
0 30 60 90 120
| | | | | |145
sptrembl|Q9D165|Q9D16 | __________________________________________________
Local hits (HSPs) | ________________________________________
Score = 90 (36.7 bits), Expect = 0.0039, P = 0.0039
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 3 RTIPGIIKIVEFVLGIICMALAAPPLA-SATSFFMFVI-VIS----FI-INIL--LIAAY 53
RT+PG+ ++ +C LA S SF F+ V+S F+ + +L L+A Y
Sbjct: 22 RTVPGLRALLP-ARAFLCSLKGRLLLAESGLSFITFICYVVSSASAFLTVPLLEFLLAVY 80
Query: 54 FLGIREALNV-----AVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAG 108
FL +A+ + + W + + L+YF+ I +A++SD G+ AAG
Sbjct: 81 FL-FADAMQLNDKWQGLCWPMMDFLRCVTAALIYFVISITAVAKYSD------GAYKAAG 133
Query: 109 VFGLF 113
VFG F
Sbjct: 134 VFGFF 138
^ = swissnew|P21145|MAL_HUMAN Myelin and lymphocyte protein (T-lymphocyte
maturation-associated protein).//:swiss|P21145|MAL_HUMAN Myelin and
lymphocyte protein (T-lymphocyte maturation-associated
protein).//:trembl|BC000458|BC000458_1 product: "mal, T-cell
differentiation protein"; Homo sapiens, mal, T-cell
differentiation protein, clone MGC:8492 IMAGE:2822079, mRNA,
complete cds. //:trembl|BC003006|BC003006_1 product: "mal, T-cell
differentiation protein"; Homo sapiens, mal, T-cell
differentiation protein, clone MGC:4006 IMAGE:2822079, mRNA,
complete cds. //:trembl|M15800|HSMAL_1 Human MAL protein gene mRNA,
complete cds. //:trembl|X76220|HSMAL1_1 gene: "MAL"; H.sapiens MAL
gene exon 1 (and joined CDS) //:trembl|X76678|HSMALA_1 gene:
"MAL-a"; H.sapiens MAL-a mRNA //:gp|M15800|307157 MAL protein
[Homo sapiens]//:gp|BC000458|12653377 mal, T-cell differentiation
protein [Homo sapiens]//:gp|BC003006|12804295 mal, T-cell
differentiation protein [Homo sapiens]//:gp|X76220|2654296 MAL
[Homo sapiens]//:gp|X76678|435478 MAL-a [Homo sapiens]
Length = 153
0 30 60 90 120 150
| | | | | |153
swissnew|P21145|MAL_H | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 90 (36.7 bits), Expect = 0.0052, P = 0.0052
Identities = 36/137 (26%), Positives = 53/137 (38%)
Query: 2 FRTIPGIIKIVEFVLGIICMALAAPPLAS---ATSFFMFVIVISFIINILLIAAYFLGIR 58
F T+P ++ I EF+ G + L A L + MFV V F+ LI Y +G
Sbjct: 19 FTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFCFVATTTLIILYIIG-- 76
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGFIVQ-LAR--WSDA-TGKGSGSNTAAGVFGLFN 114
A +W+ + L Y +++ LA D T + N AA VF
Sbjct: 77 -AHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIA 135
Query: 115 FLAYAAGTYFLFLAHRS 131
L Y F + +S
Sbjct: 136 TLLYVVHAVFSLIRWKS 152
^ = swiss|Q64349|MAL_RAT Myelin and lymphocyte protein (T-lymphocyte
maturation-associated protein) (17 kDa myelin vesicular protein)
(MVP17) (NS 3).//:trembl|U31367|RN31367_1 product: "myelin protein
MVP17"; Rattus norvegicus myelin protein MVP17 mRNA, complete cds.
//:trembl|X82557|RNMALGENE_1 gene: "MAL"; product: "myelin and
lymphocyte protein"; R.norvegicus MAL protein gene and mRNA
//:gp|X82557|854417 myelin and lymphocyte protein [Rattus
norvegicus]//:gp|U31367|914968 myelin protein MVP17 [Rattus
norvegicus]
Length = 153
0 30 60 90 120 150
| | | | | |153
swiss|Q64349|MAL_RAT | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 89 (36.4 bits), Expect = 0.0076, P = 0.0076
Identities = 32/137 (23%), Positives = 55/137 (40%)
Query: 2 FRTIPGIIKIVEFVLG-IICMALAAP--PLASATSFFMFVIVISFIINILLIAAYFLGIR 58
F T P ++ I EF+ G ++ + +A+ P+ + MFV V F+ L+ Y +G
Sbjct: 19 FVTFPDLLFIFEFIFGGLVWILIASSLVPMPLVQGWVMFVSVFCFLATTSLMVMYIIGTH 78
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGFIVQ----LARWSDATGKGSGSNTAAGVFGLFN 114
+WI + V L Y +++ + + T + N AA VF
Sbjct: 79 GG---ETSWITLDAAYHCVAALFYLSASVLEALATITMFDGFTYRHYHENIAAVVFAYVA 135
Query: 115 FLAYAAGTYFLFLAHRS 131
L Y F + +S
Sbjct: 136 TLLYVIHAVFSLIRWKS 152
^ = sptrembl|Q9ESD6|Q9ESD6 LNV.//:trembl|AF188504|AF188504_1 gene: "Lnv";
product: "LNV"; Mus musculus LNV (Lnv) mRNA, complete cds.
//:gp|AF188504|10257397 LNV [Mus musculus]
Length = 167
0 40 80 120 160
| | | | | |167
sptrembl|Q9ESD6|Q9ESD | __________________________________________________
Local hits (HSPs) | ________________________________
Score = 88 (36.0 bits), Expect = 0.016, P = 0.015
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 8 IIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREALNVAVNW 67
+ ++V ++ IC+ + P A SFF V + I+ ++ + L ++W
Sbjct: 42 VAQMVTLLIAFICVRSSVPIDYGAHSFFEVVTMCDLIMILIFYLVHLFRFYRVLT-CISW 100
Query: 68 IFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFG-LFNFLAYAA 120
SEL+ + TLL I IV ++ + +G +G+ +FG L +FL A+
Sbjct: 101 PLSELLHYLIGTLLLLIASIVIASKSYNQSGLVAGA-----IFGFLASFLCLAS 149
^ = sptrembl|O01539|O01539 SIMILARITY to RAT plasmolipin (F47B3.3
protein).//:trembl|U97013|CEUF28H1_1 gene: "F28H1.4"; product:
"Hypothetical protein F28H1.4"; Caenorhabditis elegans cosmid
F28H1, complete sequence. //:pironly|T29464|T29464 hypothetical
protein F28H1.4 - Caenorhabditis elegans//:gp|U97013|1938532
Hypothetical protein F28H1.4 [Caenorhabditis
elegans]//:worm|CE09769|F28H1.4 status:Predicted TR:P83386
protein_id:AAB52340.1
Length = 281
0 60 120 180 240
| | | | | |281
sptrembl|O01539|O0153 | __________________________________________________
Local hits (HSPs) | ________________________
Score = 91 (37.1 bits), Expect = 0.017, P = 0.016
Identities = 35/144 (24%), Positives = 58/144 (40%)
Query: 1 YFRTIPGIIKIVEFVLGIICM--ALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIR 58
Y RT+ GI+KIV VL ++ + P + + FV + + L+ Y +
Sbjct: 118 YIRTLGGIMKIVCIVLCLLTFIFVMMGPAYYTGVGWATFVSSVGIFVTTSLLTLYLFRVV 177
Query: 59 EALNVAVNWI-----------FSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAA 107
+ L ++NWI F E++ T+ +FI V S G + + A
Sbjct: 178 DTLP-SINWIVCLSTRTEIIIFQEMVYCFAWTVFFFIAACVLAVASSQFRGTFAWAIAAF 236
Query: 108 GVFGLFNFLAYAAGTYFLFLAHRS 131
FG AY Y FL+ ++
Sbjct: 237 FAFGAM--CAYGFDCYLKFLSWKN 258
^ = sptrembl|Q95302|Q95302 Intestinal A4 membrane protein (Fragment).
Length = 94
0 20 40 60 80
| | | | | |94
sptrembl|Q95302|Q9530 | __________________________________________________
Local hits (HSPs) | _______________________________________
Score = 76 (31.8 bits), Expect = 0.017, P = 0.017
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
+ RT G + + E V +C+ + ++ATS F F+ VI I + Y +
Sbjct: 19 FSRTRKGFVLLAEIV---VCLVILIC-FSAATSGFSFLSVIEMIFAAVFFVIYMCDLHTK 74
Query: 61 LNVAVNWIFSELITTAVLTLL 81
+ + +NW +S+ + +L
Sbjct: 75 IQI-INWPWSDFFRXLIAAIL 94
^ = sptrembl|Q95ZR6|Q95ZR6 K09G1.1b protein.//:tremblnew|Z81101|CEK09G1_4 gene:
"K09G1.1b"; Caenorhabditis elegans cosmid K09G1
//:trembl|Z81101|CEK09G1_5 gene: "K09G1.1b"; Caenorhabditis
elegans cosmid K09G1 //:gp|Z81101|14530509 cDNA EST EMBL:AU112133
comes from this gene~cDNA EST EMBL:AU115982 comes from this gene
[Caenorhabditis elegans]//:worm|CE27428|K09G1.1b
status:Partially_confirmed TR:Q95ZR6 protein_id:CAC42330.1
Length = 199
0 40 80 120 160
| | | | | |199
sptrembl|Q95ZR6|Q95ZR | __________________________________________________
Local hits (HSPs) | ____________________________
Score = 86 (35.3 bits), Expect = 0.055, P = 0.054
Identities = 38/116 (32%), Positives = 53/116 (45%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
Y T+ G++KI E VL I LA T+ + ISF +L+++A LG
Sbjct: 49 YLATLAGVLKIAEIVLSFIAFILAICADRRTTTA-AWTEHISFE-TLLIVSALLLGYVVF 106
Query: 61 LNVAVN-------WIFSELITTAVLTLLYFIGF--IVQL-ARWSDATGKGSGSNTA 106
++ + I ELI V TLLYFI +V L A W G+G+ TA
Sbjct: 107 PHLTIKDEATREGLIVVELIFYGVNTLLYFISIWLMVHLSASWG-TDGRGAAIMTA 161
^ = sptrembl|Q9XVL1|Q9XVL1 K09G1.1a protein.//:tremblnew|Z81101|CEK09G1_2 gene:
"K09G1.1a"; Caenorhabditis elegans cosmid K09G1
//:trembl|Z81101|CEK09G1_2 gene: "K09G1.1a"; Caenorhabditis
elegans cosmid K09G1 //:pironly|T23549|T23549 hypothetical protein
K09G1.1 - Caenorhabditis elegans//:gp|Z81101|3878497 predicted
using Genefinder~cDNA EST EMBL:T00664 comes from this gene~cDNA EST
yk125d10.5 comes from this gene~cDNA EST yk125d10.3 comes from this
gene~cDNA EST yk256c5.3 comes from this gene~cDNA EST yk256c5.5
comes from this gene~cDNA EST yk558f7.3 comes from this gene~cDNA
EST yk558f7.5 comes from this gene [Caenorhabditis
elegans]//:worm|CE12040|K09G1.1a status:Partially_confirmed
TR:Q9XVL1 protein_id:CAB03197.1
Length = 210
0 50 100 150 200
| | | | | |210
sptrembl|Q9XVL1|Q9XVL | __________________________________________________
Local hits (HSPs) | __________________________
Score = 86 (35.3 bits), Expect = 0.063, P = 0.061
Identities = 38/116 (32%), Positives = 53/116 (45%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
Y T+ G++KI E VL I LA T+ + ISF +L+++A LG
Sbjct: 60 YLATLAGVLKIAEIVLSFIAFILAICADRRTTTA-AWTEHISFE-TLLIVSALLLGYVVF 117
Query: 61 LNVAVN-------WIFSELITTAVLTLLYFIGF--IVQL-ARWSDATGKGSGSNTA 106
++ + I ELI V TLLYFI +V L A W G+G+ TA
Sbjct: 118 PHLTIKDEATREGLIVVELIFYGVNTLLYFISIWLMVHLSASWG-TDGRGAAIMTA 172
^ = sptrembl|Q96FZ5|Q96FZ5 Unknown (protein for
MGC:19762).//:trembl|BC010116|BC010116_1 product: "Unknown (protein
for MGC:19762)"; Homo sapiens, clone MGC:19762 IMAGE:3636045,
mRNA, complete cds. //:gp|BC010116|14603318 Unknown (protein for
MGC:19762) [Homo sapiens]
Length = 175
0 40 80 120 160
| | | | | |175
sptrembl|Q96FZ5|Q96FZ | __________________________________________________
Local hits (HSPs) | _________________________________
Score = 84 (34.6 bits), Expect = 0.080, P = 0.077
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 1 YFRTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREA 60
Y RT ++K+ + V +I L + S + + V++ I+++A Y + +
Sbjct: 40 YPRTHAALLKVAQMVTLLIAFICVRSSLWTNYSAYSYFEVVTICDLIMILAFYLVHLFRF 99
Query: 61 LNV--AVNWIFSELITTAVLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLF-NFLA 117
V ++W SEL+ + TLL I IV ++ + +G +G+ +FG FL
Sbjct: 100 YRVLTCISWPLSELLHYLIGTLLLLIASIVAASKSYNQSGLVAGA-----IFGFMATFLC 154
Query: 118 YAA 120
A+
Sbjct: 155 MAS 157
^ = sptrembl|O81707|O81707 STP10 protein
(Fragment).//:trembl|AJ001663|ATAJ1663_1 gene: "STP10";
Arabidopsis thaliana STP10 gene, partial //:gp|AJ001663|3378570
STP10 [Arabidopsis thaliana]
Length = 68
0 20 40 60
| | | | |68
sptrembl|O81707|O8170 | __________________________________________________
Local hits (HSPs) | _________________________________
Score = 51 (23.0 bits), Expect = 0.084, Sum P(2) = 0.081
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGF 86
+A+NV+VN F+ LI LT+L + F
Sbjct: 20 QAINVSVNMFFTFLIGQFFLTMLCHMKF 47
Score = 33 (16.7 bits), Expect = 0.084, Sum P(2) = 0.081
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 110 FGLFNFLA--YAAGTYFLF 126
FGLF F A A T F++
Sbjct: 47 FGLFYFFASMVAIMTVFIY 65
^ = sptrembl|Q946W9|Q946W9 Hexose transporter
(Fragment).//:tremblnew|AF367454|AF367454_1 product: "hexose
transporter"; Prunus persica clone Stp1 hexose transporter mRNA,
partial cds. //:trembl|AF367454|AF367454_1 product: "hexose
transporter"; Prunus persica clone Stp1 hexose transporter mRNA,
partial cds. //:gp|AF367454|16305095 hexose transporter [Prunus
persica]
Length = 76
0 20 40 60
| | | | |76
sptrembl|Q946W9|Q946W | __________________________________________________
Local hits (HSPs) | ____________________________
Score = 54 (24.1 bits), Expect = 0.11, Sum P(2) = 0.10
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGF 86
+++NV+VN IF+ L+ LT+L + F
Sbjct: 22 QSVNVSVNMIFTFLVAQIFLTMLCHLKF 49
Score = 34 (17.0 bits), Expect = 0.11, Sum P(2) = 0.10
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 110 FGLFNFLAYAAGTYFLFL 127
FGLF F A+ +F+
Sbjct: 49 FGLFLFFAFFVFVMSIFI 66
^ = swissnew|Q969L2|MAL2_HUMAN MAL2 protein.//:trembl|AY007723|AY007723_1 gene:
"MAL2"; product: "MAL2 proteolipid"; Homo sapiens MAL2 proteolipid
(MAL2) mRNA, complete cds. //:trembl|BC012367|BC012367_1 product:
"Unknown (protein for MGC:17366)"; Homo sapiens, clone MGC:17366
IMAGE:3860009, mRNA, complete cds. //:gp|AY007723|15431042 MAL2
proteolipid [Homo sapiens]//:gp|BC012367|15706437 Unknown (protein
for MGC:17366) [Homo sapiens]
Length = 176
0 40 80 120 160
| | | | | |176
swissnew|Q969L2|MAL2_ | __________________________________________________
Local hits (HSPs) | __________________________
Score = 83 (34.3 bits), Expect = 0.11, P = 0.11
Identities = 24/95 (25%), Positives = 41/95 (43%)
Query: 3 RTIPGIIKIVEFVLGIICMALAAP---PLASATSFFMFVIVISFIINILLIAAYFLGIRE 59
RT G +E + G + L A PL + MFV V +F ++L + + G+
Sbjct: 33 RTYSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMFVSVTAFFFSLLFLGMFLSGM-- 90
Query: 60 ALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWS 94
+ NW F + + + YF F+++ A S
Sbjct: 91 VAQIDANWNFLDFAYHFTVFVFYFGAFLLEAAATS 125
^ = sptrembl|Q8ZXJ6|Q8ZXJ6 Manganese transport permease
protein.//:trembl|AE009811|AE009811_2 gene: "PAE1247"; product:
"manganese transport permease protein"; Pyrobaculum aerophilum
strain IM2 section 66 of 201 of the complete genome.
//:gp|AE009811|18159964 manganese transport permease protein
[Pyrobaculum aerophilum]
Length = 291
0 60 120 180 240
| | | | | |291
sptrembl|Q8ZXJ6|Q8ZXJ | __________________________________________________
Local hits (HSPs) | _________
Score = 85 (35.0 bits), Expect = 0.16, P = 0.15
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 32 TSFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIV 88
TSF++FV+ + ++N+ ++AA LG RE +VA + S L TA + LL+ + ++
Sbjct: 82 TSFYLFVLFFAILLNLSVLAAGRLGYRE--DVATGVVMS-LQITATIALLFVVRMVL 135
^ = sptremblnew|AAM70210|AAM70210 Occlusion derived virus envelope protein
18.//:tremblnew|AF499596|AF499596_12 gene: "PhopGV012"; product:
"occlusion derived virus envelope protein 18"; Phthorimaea
operculella granulovirus, complete genome. //:gp|AF499596|21636993
occlusion derived virus envelope protein 18 [Phthorimaea
operculella granulovirus]
Length = 83
0 20 40 60 80
| | | | | |83
sptremblnew|AAM70210| | __________________________________________________
Local hits (HSPs) | ______________________
Score = 63 (27.2 bits), Expect = 0.56, P = 0.43
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 77 VLTLLYFIGFIVQLARWSDATGKGSGSNTAAGVFGLFN 114
VL ++ + + ++ SD++G G +NT AG F N
Sbjct: 28 VLVIIILLVLLFNMSSGSDSSGSGPATNTRAGFFNPLN 65
^ = sptrembl|Q9W4B6|Q9W4B6 CG12730 protein
(RE01432p).//:trembl|AE003434|AE003434_18 gene: "CG12730";
Drosophila melanogaster genomic scaffold 142000013386054 section 18
of 35, complete sequence. //:trembl|AY069764|AY069764_1 product:
"RE01432p"; Drosophila melanogaster RE01432 full length cDNA.
//:gp|AY069764|17862864 RE01432p [Drosophila
melanogaster]//:gp|AE003434|7290590 CG12730 gene product
[Drosophila melanogaster]//:gpnew|AE003434|7290590 CG12730-PA
[Drosophila melanogaster]
Length = 148
0 30 60 90 120
| | | | | |148
sptrembl|Q9W4B6|Q9W4B | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 76 (31.8 bits), Expect = 0.63, P = 0.47
Identities = 35/123 (28%), Positives = 55/123 (44%)
Query: 1 YFRTIPGIIKIV----EFVLGIICMALAAPPLAS--ATSFFMFVIVISFIINILLIAAYF 54
Y ++PG+ K+ FV GI+C+ + P S SF++ V+ I F+ L+ A +
Sbjct: 13 YLLSMPGLCKLACLLCSFV-GILCI-ICGPVRVSNFRGSFYLAVVTIGFVATGCLLLARY 70
Query: 55 LGIREALNVAVNWIFSELITTAVLTLLYFI--GFIVQLARWSDATGKGSGSNTAAGVFGL 112
L + + + L + L L YF G ++ L D G+ TAA FGL
Sbjct: 71 LRLWQRQFCRCDPTLWSLAVHSSLALAYFTASGLVLSL----DI-----GAYTAAAFFGL 121
Query: 113 FNF 115
F
Sbjct: 122 TAF 124
^ = swiss|O43760|SNG2_HUMAN Synaptogyrin 2
(Cellugyrin).//:sptremblnew|AAH29755|AAH29755 Synaptogyrin
2.//:trembl|BC000407|BC000407_1 product: "synaptogyrin 2"; Homo
sapiens, synaptogyrin 2, clone MGC:8571 IMAGE:2823026, mRNA,
complete cds. //:trembl|BC029755|BC029755_1 product: "synaptogyrin
2"; Homo sapiens, synaptogyrin 2, clone MGC:21859 IMAGE:4341106,
mRNA, complete cds. //:trembl|AJ002308|HSAJ2308_1 gene: "SYNGR2";
product: "synaptogyrin 2"; Homo sapiens mRNA for synaptogyrin 2
//:gp|AJ002308|2959872 synaptogyrin 2 [Homo
sapiens]//:gp|BC029755|20987257 synaptogyrin 2 [Homo
sapiens]//:gp|BC000407|12653277 synaptogyrin 2 [Homo sapiens]
Length = 224
0 50 100 150 200
| | | | | |224
swiss|O43760|SNG2_HUM | __________________________________________________
Local hits (HSPs) | _____________________
Score = 79 (32.9 bits), Expect = 0.69, P = 0.50
Identities = 24/99 (24%), Positives = 48/99 (48%)
Query: 40 VISFIIN--ILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDAT 97
V++F+ + L++ AYF I A + + +L+ +A+ T L+F+GF +W+
Sbjct: 76 VLAFLASAFFLVVDAYFPQISNATDRKY-LVIGDLLFSALWTFLWFVGFCFLTNQWAVTN 134
Query: 98 GK----GSGSNTAAGVFGLFNFLAYAAGTYFLFLAHRSG 132
K G+ S AA F F+ ++ + +++G
Sbjct: 135 PKDVLVGADSVRAAITFSFFSIFSWGVLASLAYQRYKAG 173
^ = sptrembl|Q9V6U3|Q9V6U3 CG10808 protein
(RH60941p).//:tremblnew|AE003817|AE003817_21 gene: "synaptogyrin";
product: "CG10808-PA"; Drosophila melanogaster 2R section 33 of
74 of the complete arm, complete sequence.
//:trembl|AE003817|AE003817_21 gene: "CG10808"; Drosophila
melanogaster genomic scaffold 142000013386047 section 26 of 52,
complete sequence. //:trembl|AY071753|AY071753_1 gene:
"synaptogyrin"; product: "RH60941p"; Drosophila melanogaster
RH60941 full length cDNA. //:gp|AY071753|17946690 RH60941p
[Drosophila melanogaster]//:gp|AE003817|7303268 CG10808-PA
[Drosophila melanogaster]
Length = 241
0 50 100 150 200
| | | | | |241
sptrembl|Q9V6U3|Q9V6U | __________________________________________________
Local hits (HSPs) | ___________________
Score = 79 (32.9 bits), Expect = 0.79, P = 0.55
Identities = 23/94 (24%), Positives = 48/94 (51%)
Query: 31 ATSFFMFVIVISFIINILLIAAYFLGIR-EALNVAVNWIFSELITTAVLTLLYFIGFIVQ 89
A + V V F+ ++ + FL R ++ ++ +++ +A+ T +YF+ F+
Sbjct: 75 ACKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALWTFMYFVAFLYL 134
Query: 90 LARWSDAT----GKGSGSNTAAGVFGLFNFLAYA 119
++WS + G G+GS A F LF+ +++A
Sbjct: 135 WSQWSSSAPPPLGIGAGSMKTAIWFCLFSIVSWA 168
^ = sptremblnew|AAN00588|AAN00588 Conserved hypothetical
protein.//:tremblnew|AE014270|AE014270_6 gene: "SAG1725"; product:
"conserved hypothetical protein"; Streptococcus agalactiae
serotype V section 80 of 100 of the complete genome.
//:gpnew|AE014270|22534760 conserved hypothetical protein
[Streptococcus agalactiae]
Length = 160
0 40 80 120 160
| | | | |160
sptremblnew|AAN00588| | __________________________________________________
Local hits (HSPs) | __________________________
Score = 76 (31.8 bits), Expect = 0.81, P = 0.55
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 28 LASATSFFMFVIVISFIINILLIAAYFLGIREAL-NVAVNWIFSELITTAVLTLLYFIGF 86
L++ T F +FV + ++NI ++ +R N VN++ + A+ L +GF
Sbjct: 60 LSATTPFMLFVTALIVLVNIAIVIFCIKNLRAIKRNQTVNYL-PYYLGFAITVGLVILGF 118
Query: 87 IVQLARWSDATGKGSGSNTAAGVFGLFNFLAY 118
+ A W+ A + +FGL F AY
Sbjct: 119 LTTKAPWAIAI-----NIVFQAIFGLLYFHAY 145
^ = swissnew|Q16625|OCLN_HUMAN Occludin.//:swiss|Q16625|OCLN_HUMAN
Occludin.//:trembl|AF400630|AF400630_1 gene: "OCLN"; product:
"occludin"; Homo sapiens occludin (OCLN) gene, exon 9 and complete
cds. //:trembl|U49184|HS491841_1 product: "occludin"; Human
occludin mRNA, complete cds. //:trembl|U53823|HS5382310_1 product:
"occludin"; Human tight junction protein occludin mRNA, complete
cds. //:pironly|G02533|G02533 occludin -
human//:gp|AF400630|17864891 occludin [Homo
sapiens]//:gp|U53823|1322282 occludin [Homo
sapiens]//:gp|U49184|1276979 occludin [Homo sapiens]
Length = 522
0 110 220 330 440
| | | | | |522
swissnew|Q16625|OCLN_ | __________________________________________________
Local hits (HSPs) | _ _________
Score = 70 (29.7 bits), Expect = 1.2, Sum P(2) = 0.69
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 30 SATSFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQ 89
+A F + + FI +++ IR ++ + S +I +A+L ++ FI IV
Sbjct: 136 AAKGFMLAMAAFCFIAALVIFVTSV--IRSEMSRTRRYYLSVIIVSAILGIMVFIATIVY 193
Query: 90 LARWSDATGKGSGSNTAAGVFGLFN--FLAYAAGTYF-LFLAH 129
+ + T + SGS + ++ L N + A G Y +L H
Sbjct: 194 IMG-VNPTAQSSGSLYGSQIYALCNQFYTPAATGLYVDQYLYH 235
Score = 48 (22.0 bits), Expect = 1.2, Sum P(2) = 0.69
Identities = 7/20 (35%), Positives = 16/20 (80%)
Query: 6 PGIIKIVEFVLGIICMALAA 25
PG+I+I+ ++ ++C+A+ A
Sbjct: 62 PGVIRILSMLIIVMCIAIFA 81
^ = trembl|AJ002310|HSAJ2310_1 gene: "SYNGR2"; product: "synaptogyrin 2"; Homo
sapiens gene encoding synaptogyrin 2, exon 1 (and joined CDS)
//:gp|AJ002310|2959876 synaptogyrin 2 [Homo sapiens]
Length = 162
0 40 80 120 160
| | | | |162
trembl|AJ002310|HSAJ2 | __________________________________________________
Local hits (HSPs) | _________________________
Score = 75 (31.5 bits), Expect = 1.2, P = 0.69
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 40 VISFIIN--ILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWSDAT 97
V++F+ + L++ AYF I A + + +L+ +A+ T L+F+GF +W+
Sbjct: 76 VLAFLASAFFLVVDAYFPQISNATDRKY-LVIGDLLFSALWTFLWFVGFCFLTNQWAVTN 134
Query: 98 GK----GSGSNTAAGVFGLFNFLAY 118
K G+ S AA F F+ ++
Sbjct: 135 PKDVLVGADSVRAAITFSFFSIFSW 159
^ = swissnew|O54701|NKX2_RAT Sodium/potassium/calcium exchanger 2 precursor
(Na(+)/K(+)/Ca(2+)- exchange protein 2) (Retinal cone Na-Ca+K
exchanger).//:trembl|AF021923|AF021923_1 gene: "NCKX2"; product:
"potassium-dependent sodium-calcium exchanger"; Rattus norvegicus
potassium-dependent sodium-calcium exchanger (NCKX2) mRNA, complete
cds. //:gp|AF021923|2662461 potassium-dependent sodium-calcium
exchanger [Rattus norvegicus]
Length = 670
0 140 280 420 560
| | | | | |670
swissnew|O54701|NKX2_ | __________________________________________________
Local hits (HSPs) | ______
Score = 82 (33.9 bits), Expect = 1.3, P = 0.74
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 4 TIPG--IIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREAL 61
TI G + I+ FV+G+ C AL + + + T + +F V +I++++++ +FL
Sbjct: 208 TIVGSAVFNIL-FVIGM-C-ALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLD----- 259
Query: 62 NVAVNWIFSELITTAVLTLLYFIGFIVQLARW 93
NV + W S L+ TA + F+ F VQ+ RW
Sbjct: 260 NV-IMWWESLLLLTAYFAYVVFMKFNVQVERW 290
^ = sptrembl|Q9GYN1|Q9GYN1 Hypothetical 15.7 kDa
protein.//:trembl|U39995|CEM60_1 gene: "M60.3"; product:
"Hypothetical protein M60.3"; Caenorhabditis elegans cosmid M60,
complete sequence. //:pironly|T28849|T28849 hypothetical protein
M60.3 - Caenorhabditis elegans
Length = 139
0 30 60 90 120
| | | | | |139
sptrembl|Q9GYN1|Q9GYN | __________________________________________________
Local hits (HSPs) | _______________________________
Score = 73 (30.8 bits), Expect = 1.4, P = 0.76
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 1 YFRTIPGIIKIVEFVLG-IICMALAAPPLASATSFFMFVIVISFIIN-ILLIAAYFLGIR 58
Y T GIIKI++ + G IIC L + + F + S +N + +I L I
Sbjct: 10 YLSTNRGIIKILQIIAGFIICSLLCSQWYGGRSCFGEGRLGFSSGLNFVCVIVNIVLFIL 69
Query: 59 EALNVAVNWIFSELITTAVLTLLYFIGFIV 88
LN+ W E I T + T+L+ I I+
Sbjct: 70 NFLNIRA-WGL-ERIYTVICTILFLIASIL 97
^ = sptremblnew|AAH29886|AAH29886 Occludin.//:trembl|BC029886|BC029886_1
product: "occludin"; Homo sapiens, occludin, clone MGC:34277
IMAGE:5179203, mRNA, complete cds. //:gp|BC029886|20987418 occludin
[Homo sapiens]
Length = 522
0 110 220 330 440
| | | | | |522
sptremblnew|AAH29886| | __________________________________________________
Local hits (HSPs) | _ ________
Score = 69 (29.3 bits), Expect = 1.6, Sum P(2) = 0.79
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 30 SATSFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQ 89
+A F + + FI +++ IR ++ + S +I +A+L ++ FI IV
Sbjct: 136 AAKGFMLAMAAFCFIAALVIFVTSV--IRSEMSRTRRYYLSVIIVSAILGIMVFIATIVY 193
Query: 90 LARWSDATGKGSGSNTAAGVFGLFN--FLAYAAGTY 123
+ + T + SGS + ++ L N + A G Y
Sbjct: 194 IMG-VNPTAQSSGSLYGSQIYALCNQFYTPAATGLY 228
Score = 48 (22.0 bits), Expect = 1.6, Sum P(2) = 0.79
Identities = 7/20 (35%), Positives = 16/20 (80%)
Query: 6 PGIIKIVEFVLGIICMALAA 25
PG+I+I+ ++ ++C+A+ A
Sbjct: 62 PGVIRILSMLIIVMCIAIFA 81
^ = sptrembl|O44798|O44798 Hypothetical 63.5 kDa
protein.//:trembl|AF040642|AF040642_7 gene: "C50D2.2"; product:
"Hypothetical protein C50D2.2"; Caenorhabditis elegans cosmid
C50D2, complete sequence. //:pironly|T32785|T32785 hypothetical
protein C50D2.2 - Caenorhabditis elegans//:gp|AF040642|2746784
Hypothetical protein C50D2.2 [Caenorhabditis
elegans]//:worm|CE08887|C50D2.2 amino acid permease
status:Partially_confirmed TR:O44798 protein_id:AAB94950.1
Length = 589
0 120 240 360 480
| | | | | |589
sptrembl|O44798|O4479 | __________________________________________________
Local hits (HSPs) | ________
Score = 81 (33.6 bits), Expect = 1.6, P = 0.80
Identities = 25/102 (24%), Positives = 51/102 (50%)
Query: 28 LASATSFFM-FVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGF 86
L A+SFF + +++F++ +L+ A+F+ + ++ N F ++ ++ ++ F G
Sbjct: 152 LHEASSFFGDYPDLLAFLLIVLV--AFFVALGSKVSTNFN-SFLTILNIGIVVIVVFYGI 208
Query: 87 -IVQLARWSDATGKGSGSNTAAGVFGLFNFLAYAAGTYFLFL 127
+ WS KG+ GV G+F A AA +F ++
Sbjct: 209 TFADFSLWSGVDEKGNSRFFPYGVSGMF---AGAASCFFAYI 247
^ = sptrembl|P90471|P90471 ORF YBR109W-A (Hypothetical 8.6 kDa
protein).//:trembl|J05416|SCALG1_1 gene: "ALG1"; product: "unknown
protein"; Saccharomyces cerevisiae beta-mannosyltransferase (alg1)
gene, complete cds. //:trembl|Z35978|SCYBR109C_2 S.cerevisiae
chromosome II reading frame ORF YBR109c
//:trembl|Z35979|SCYBR110W_2 S.cerevisiae chromosome II reading
frame ORF YBR110w //:pironly|B35762|B35762 hypothetical protein
YBR109w-a - yeast (Saccharomyces cerevisiae)//:gp|J05416|806322
unknown protein [Saccharomyces cerevisiae]//:gp|Z35978|1870108 ORF
YBR109w-a [Saccharomyces cerevisiae]//:gp|Z35979|1870109 ORF
YBR109w-a [Saccharomyces cerevisiae]
Length = 74
0 20 40 60
| | | | |74
sptrembl|P90471|P9047 | __________________________________________________
Local hits (HSPs) | ________________________________________________
Score = 59 (25.8 bits), Expect = 1.7, P = 0.82
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 8 IIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREAL-NVAVN 66
++ ++ F L ++C L A + + F++++ + I ++I + I A N VN
Sbjct: 1 MVDVLRFYLCLLCRFLHALTVTFLSDIFVWLVAKTRSIQAVIIL-HVASIERAYSNHQVN 59
Query: 67 W--IFSELITTAV 77
W IF I+ A+
Sbjct: 60 WSYIFQSAISKAI 72
^ = sptrembl|O34610|O34610 YCEA.//:trembl|AB000617|AB000617_22 gene: "yceA";
product: "YceA"; Bacillus subtilis genomic DNA, 22 to 25 degree
region, complete cds. //:trembl|Z99105|BSUB0002_116 gene: "yceA";
Bacillus subtilis complete genome (section 2 of 21): from 194651 to
415810. //:pironly|C69756|C69756 conserved hypothetical protein
yceA - Bacillus subtilis//:gp|AB000617|2415738 YceA [Bacillus
subtilis]//:gp|Z99105|2632573 similar to hypothetical proteins
[Bacillus subtilis]
Length = 280
0 60 120 180 240
| | | | | |280
sptrembl|O34610|O3461 | __________________________________________________
Local hits (HSPs) | _____________
Score = 77 (32.2 bits), Expect = 1.9, P = 0.85
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 28 LASATSFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFI 87
+A+ SF MF+I +S + I Y G +N +I S +IT +L LLYFI
Sbjct: 94 MAAGLSFAMFLISLSKGTANMSIDQYLFGSLVTVNQQQVYIIS-IIT--LLILLYFIVLR 150
Query: 88 --VQLARWSDATGKGSGSNT 105
+ L + +AT K SG NT
Sbjct: 151 RPLYLLTFDEATAKTSGINT 170
^ = sptrembl|Q9K7Z4|Q9K7Z4 Hypothetical protein
BH3213.//:trembl|AP001518|AP001518_44 gene: "BH3213"; Bacillus
halodurans genomic DNA, section 12/14. //:pironly|E84051|E84051
hypothetical protein BH3213 [imported] - Bacillus halodurans
(strain C-125)//:gp|AP001518|10175836 BH3213~unknown conserved
protein in others [Bacillus halodurans]
Length = 345
0 70 140 210 280
| | | | | |345
sptrembl|Q9K7Z4|Q9K7Z | __________________________________________________
Local hits (HSPs) | ___________
Score = 78 (32.5 bits), Expect = 2.0, P = 0.86
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 9 IKIVEFV-LGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREALNVAVNW 67
I IV F+ LG++ MA L S F+ VISF+ IL+ A+++ + +V
Sbjct: 157 INIVLFIALGMLVMAFGILILGIPPSIDEFLRVISFLFLILIYIAFWINLAILFSV---- 212
Query: 68 IFSELITTAVLTLLYFIGFIV 88
IF + T+A+ ++ ++ F+V
Sbjct: 213 IFRQQATSALSSMALWLFFLV 233
^ = sptremblnew|BAC04265|BAC04265 CDNA FLJ36680 fis, clone UTERU2006412,
moderately similar to MYELOID UPREGULATED
PROTEIN.//:tremblnew|AK093999|AK093999_1 unnamed ORF; Homo sapiens
cDNA FLJ36680 fis, clone UTERU2006412, moderately similar to
MYELOID UPREGULATED PROTEIN. //:gp|AK093999|21752971 unnamed
protein product [Homo sapiens]
Length = 304
0 60 120 180 240 300
| | | | | |304
sptremblnew|BAC04265| | __________________________________________________
Local hits (HSPs) | ______________
Score = 77 (32.2 bits), Expect = 2.2, P = 0.89
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 1 YFRTIPGIIKIVE-FVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIRE 59
Y T+PG++K++E FV II ++ P L + + + I IL A L + E
Sbjct: 150 YMATVPGLLKVLETFVACIIFAFISDPNLYQHQPALEWCVAVYAICFILAAIAILLNLGE 209
Query: 60 ALNVAVNWIFSELITTAVLTLLYFIGFIV 88
NV S L A+L++L + +V
Sbjct: 210 CTNVLPIPFPSFLSGLALLSVLLYATALV 238
^ = sptrembl|Q973H6|Q973H6 Hypothetical protein
ST0925.//:tremblnew|AP000984|AP000984_79 gene: "ST0925"; product:
"189aa long hypothetical protein"; Sulfolobus tokodaii genomic
DNA, complete sequence, section:4/10.
//:trembl|AP000984|AP000984_79 gene: "ST0925"; product: "189aa long
hypothetical protein"; Sulfolobus tokodaii genomic DNA, complete
sequence, section:4/10. //:gp|AP000984|15621944 189aa long
hypothetical protein [Sulfolobus
tokodaii]//:gpnew|AP000984|15621944 189aa long hypothetical protein
[Sulfolobus tokodaii]
Length = 189
0 40 80 120 160
| | | | | |189
sptrembl|Q973H6|Q973H | __________________________________________________
Local hits (HSPs) | ______________________
Score = 74 (31.1 bits), Expect = 2.3, P = 0.90
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 3 RTIPGIIKIVEFVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIREALN 62
R IP I+ +V +V+G++ + +FMF +++ +IIN L+I L + +++
Sbjct: 69 RIIPMILALVSYVIGLLFLM---------HDYFMFNVLLIYIINTLIILMVTLKFKISVH 119
Query: 63 VAVNWIFSELITTAVL----TLLYFIGFIVQLARW 93
V+ + S + VL LY G ++ R+
Sbjct: 120 VSTT-VGSISLLVFVLGFPFIFLYLFGILISYVRY 153
^ = swissnew|P34959|QOX4_BACSU Quinol oxidase polypeptide IV (EC 1.9.3.-)
(Quinol oxidase aa3-600, subunit qoxD).//:swiss|P34959|QOX4_BACSU
Quinol oxidase polypeptide IV (EC 1.9.3.-) (Quinol oxidase AA3-600,
subunit QOXD).
Length = 123
0 30 60 90 120
| | | | | |123
swissnew|P34959|QOX4_ | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 70 (29.7 bits), Expect = 2.3, P = 0.90
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 33 SFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFI---VQ 89
S F + ++ FI++I+L AL VAV +++L ++A L +++ FI +Q
Sbjct: 8 SHFPWKHIVGFILSIVLTLL-------ALWVAV---YTDLSSSAKLWIIFGFAFIQAALQ 57
Query: 90 LARWSDATGKGSGSNTAAG-VFGLFNFLAYAAGTYFLFLAH 129
L + T +G+ +FG F + G+ ++F AH
Sbjct: 58 LLMFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAH 98
^ = swissnew|Q96S97|MYDM_HUMAN Myeloid-associated differentiation marker
(SB135).//:sptremblnew|BAC11513|BAC11513 CDNA FLJ90795 fis, clone
THYRO1001702, moderately similar to Mus musculus myeloid associated
differentiation protein.//:tremblnew|AK075276|AK075276_1 unnamed
ORF; Homo sapiens cDNA FLJ90795 fis, clone THYRO1001702,
moderately similar to Mus musculus mRNA for myeloid associated
differentiation protein. //:trembl|AY037147|AY037147_1 product:
"hypothetical protein SB135"; Homo sapiens hypothetical protein
SB135 mRNA, complete cds. //:trembl|BC013995|BC013995_1 product:
"Unknown (protein for MGC:20205)"; Homo sapiens, clone MGC:20205
IMAGE:3627858, mRNA, complete cds. //:gp|BC013995|15559274 Unknown
(protein for MGC:20205) [Homo sapiens]//:gp|AY037147|17942140
hypothetical protein SB135 [Homo sapiens]//:gpnew|AK075276|22761257
unnamed protein product [Homo sapiens]
Length = 322
0 70 140 210 280
| | | | | |322
swissnew|Q96S97|MYDM_ | __________________________________________________
Local hits (HSPs) | _____________
Score = 77 (32.2 bits), Expect = 2.4, P = 0.91
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 1 YFRTIPGIIKIVE-FVLGIICMALAAPPLASATSFFMFVIVISFIINILLIAAYFLGIRE 59
Y T+PG++K++E FV II ++ P L + + + I IL A L + E
Sbjct: 168 YMATVPGLLKVLETFVACIIFAFISDPNLYQHQPALEWCVAVYAICFILAAIAILLNLGE 227
Query: 60 ALNVAVNWIFSELITTAVLTLLYFIGFIV 88
NV S L A+L++L + +V
Sbjct: 228 CTNVLPIPFPSFLSGLALLSVLLYATALV 256
^ = trembl|X73124|BSGENR_41 gene: "ipa-40d qoxD"; B.subtilis genomic region
(325 to 333) //:trembl|M86548|BSQOXA_4 gene: "QOXD"; product:
"quinol oxidase"; Bacillus subtilis AA3-600 quinol oxidase (QOXA,
QOXB, QOXC, QOXD) genes, complete cds.
//:trembl|Z99123|BSUB0020_109 gene: "qoxD"; product: "cytochrome
aa3 quinol oxidase (subunit IV)"; Bacillus subtilis complete
genome (section 20 of 21): from 3798401 to 4010550.
//:gp|M86548|143399 quinol oxidase [Bacillus
subtilis]//:gp|X73124|413964 ipa-40d qoxD [Bacillus
subtilis]//:gp|Z99123|2636349 cytochrome aa3 quinol oxidase
(subunit IV) [Bacillus subtilis]
Length = 124
0 30 60 90 120
| | | | | |124
trembl|X73124|BSGENR_ | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 70 (29.7 bits), Expect = 2.4, P = 0.91
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 33 SFFMFVIVISFIINILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFI---VQ 89
S F + ++ FI++I+L AL VAV +++L ++A L +++ FI +Q
Sbjct: 9 SHFPWKHIVGFILSIVLTLL-------ALWVAV---YTDLSSSAKLWIIFGFAFIQAALQ 58
Query: 90 LARWSDATGKGSGSNTAAG-VFGLFNFLAYAAGTYFLFLAH 129
L + T +G+ +FG F + G+ ++F AH
Sbjct: 59 LLMFMHMTESENGTIQVGNTLFGFFGAIVIVLGSIWIFAAH 99
^ = sptrembl|Q8W9T8|Q8W9T8 NADH dehydrogenase subunit 4L
(Fragment).//:trembl|AF162100|AF162100_2 gene: "ND4L"; product:
"NADH dehydrogenase subunit 4L"; Leptasterias aequalis haplotype L
cytochrome oxidase subunit I (COI) gene, partial cds; tRNA-Arg
gene, complete sequence; and NADH dehydrogenase subunit 4L (ND4L)
gene, partial cds; mitochondrial genes for mitochondrial products.
//:gp|AF162100|18152848 NADH dehydrogenase subunit 4L [Leptasterias
aequalis]
Length = 84
0 20 40 60 80
| | | | | |84
sptrembl|Q8W9T8|Q8W9T | __________________________________________________
Local hits (HSPs) | _____________________________
Score = 60 (26.2 bits), Expect = 2.6, P = 0.92
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 42 SFIINILLIAAYFLGIREALNVAVN--WIFSELITTAVLTLLYFIGFIVQLARWSD 95
S+II I+ I ++LGI L + +N + S L+ +L + FIGF++ SD
Sbjct: 3 SYIIGIISI--FYLGI---LGILLNRLHLLSVLLCLELLLISLFIGFVILSLNLSD 53
^ = swiss|O54980|SNG2_RAT Synaptogyrin 2
(Cellugyrin).//:trembl|AF039085|AF039085_1 product: "cellugyrin";
Rattus norvegicus cellugyrin mRNA, complete cds.
//:gp|AF039085|2773064 cellugyrin [Rattus norvegicus]
Length = 234
0 50 100 150 200
| | | | | |234
swiss|O54980|SNG2_RAT | __________________________________________________
Local hits (HSPs) | ____________________
Score = 75 (31.5 bits), Expect = 2.6, P = 0.93
Identities = 23/99 (23%), Positives = 48/99 (48%)
Query: 40 VISFIIN--ILLIAAYFLGIREALNVAVNWIFSELITTAVLTLLYFIGFIVQLARWS--- 94
V++F+ + L++ A+F I A + + +L+ +A+ T L+F+GF +W+
Sbjct: 86 VLAFLASAFFLVVDAFFSQISNATDRKY-LVIGDLLFSALWTFLWFVGFCFLTNQWAATK 144
Query: 95 -DATGKGSGSNTAAGVFGLFNFLAYAAGTYFLFLAHRSG 132
D G+ S AA F F+ ++ + +++G
Sbjct: 145 PDDVLVGADSARAAITFSFFSIFSWGVLASLAYQRYKAG 183
WARNING: HSPs involving 43 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
matrix=BLOSUM62
E=10
V=50
B=50
hspmax=10
filter=none
echofilter
stats
qtype
qres
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.334 0.147 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 132 132 10. 74 3 11 21 0.20 30
30 0.21 33
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 65 (31.3 bits) 659 (317.7 bits) 100 54
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 2408 71382191 13641563 57387345 353283 4148
Database: /dove2/data/db/nrdb
Title: nrdb Release 15.Sep.2002
Release date: 15.Sep.2002
Posted date: 11:15:58 PM MDT Sep 15, 2002
Last modified: unknown
First created: unknown
Format: BLAST-1.4
# of letters in database: 307,325,055
# of sequences in database: 970,006
# of database sequences satisfying E: 93
No. of states in DFA: 491 (96 KB)
Total size of DFA: 150 KB (192 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 122.23u 6.02s 128.25t Elapsed: 00:00:47
Total cpu time: 122.31u 6.10s 128.41t Elapsed: 00:00:48
Start: Tue Sep 17 19:16:03 2002 End: Tue Sep 17 19:16:51 2002
WARNINGS ISSUED: 2