From baldig@genome.ICS.UCI.EDU Sun Jul 21 11:47:33 2002 Date: Wed, 29 May 2002 20:51:14 -0700 From: Baldis Research Group To: eva_casp@maple.bioc.columbia.edu Subject: CMapPro, CMap23Dpro response to T0130 Query_name: T0130 Query_length: 114 Prediction: MTSFAQLDIKSEELAIVKTILQQLVPDYTVWAFGSRVKGKAKKYSDLDLAIISEEPLDFL CCCHHEECCCHHHHHHHHHHHHHHCCCEEEEEECCCECCCCCECCCCCEEEECCCHHHHH ARDRLKEAFSESDLPWRVDLLDWATTSEDFREIIRKVYVVIQEKEKTVEKPTAL HHHHHHHHHCCCCCCCCECHHCHCCCCHHHHHHHHHEEEEEEECCCCCCCCCCC 1 2 0 8 0.959 1 3 0 8 0.950 1 4 0 8 0.271 2 3 0 8 0.992 2 4 0 8 0.988 2 5 0 8 0.350 3 4 0 8 0.996 3 5 0 8 0.991 3 6 0 8 0.761 4 5 0 8 0.993 4 6 0 8 0.978 4 7 0 8 0.531 5 6 0 8 0.991 5 7 0 8 0.986 6 7 0 8 0.996 6 8 0 8 0.955 7 8 0 8 0.993 7 9 0 8 0.995 7 10 0 8 0.266 7 49 0 8 0.259 7 50 0 8 0.303 7 51 0 8 0.256 8 9 0 8 0.996 8 10 0 8 0.996 9 10 0 8 0.995 9 11 0 8 0.993 9 12 0 8 0.501 9 13 0 8 0.659 9 14 0 8 0.776 10 11 0 8 0.994 10 12 0 8 0.996 10 13 0 8 0.987 10 14 0 8 0.959 11 12 0 8 0.992 11 13 0 8 0.992 11 14 0 8 0.995 11 15 0 8 0.957 12 13 0 8 0.993 12 14 0 8 0.993 12 15 0 8 0.992 12 16 0 8 0.988 13 14 0 8 0.994 13 15 0 8 0.991 13 16 0 8 0.992 13 17 0 8 0.993 14 15 0 8 0.996 14 16 0 8 0.998 14 17 0 8 0.998 14 18 0 8 0.994 15 16 0 8 0.996 15 17 0 8 0.996 15 18 0 8 0.992 15 19 0 8 0.988 16 17 0 8 0.998 16 18 0 8 0.994 16 19 0 8 0.995 16 20 0 8 0.997 17 18 0 8 0.995 17 19 0 8 0.993 17 20 0 8 0.998 17 21 0 8 0.998 18 19 0 8 0.991 18 20 0 8 0.995 18 21 0 8 0.993 18 22 0 8 0.982 19 20 0 8 0.994 19 21 0 8 0.993 19 22 0 8 0.985 19 23 0 8 0.943 20 21 0 8 0.998 20 22 0 8 0.994 20 23 0 8 0.993 20 24 0 8 0.988 20 25 0 8 0.286 21 22 0 8 0.996 21 23 0 8 0.995 21 24 0 8 0.997 21 25 0 8 0.987 21 26 0 8 0.321 22 23 0 8 0.996 22 24 0 8 0.996 22 25 0 8 0.978 22 26 0 8 0.565 23 24 0 8 0.992 23 25 0 8 0.994 23 26 0 8 0.523 24 25 0 8 0.998 24 26 0 8 0.995 24 27 0 8 0.293 24 28 0 8 0.351 25 26 0 8 0.994 25 27 0 8 0.984 25 28 0 8 0.545 26 27 0 8 0.991 26 28 0 8 0.985 27 28 0 8 0.983 27 29 0 8 0.978 28 29 0 8 0.993 28 30 0 8 0.989 28 52 0 8 0.297 28 101 0 8 0.275 29 30 0 8 0.997 29 31 0 8 0.982 29 51 0 8 0.270 29 52 0 8 0.275 29 100 0 8 0.260 29 101 0 8 0.320 30 31 0 8 0.996 30 32 0 8 0.995 30 50 0 8 0.389 30 51 0 8 0.372 30 52 0 8 0.281 30 98 0 8 0.256 30 99 0 8 0.328 30 100 0 8 0.379 30 101 0 8 0.400 31 32 0 8 0.996 31 33 0 8 0.940 31 49 0 8 0.331 31 50 0 8 0.446 31 51 0 8 0.382 31 97 0 8 0.293 31 98 0 8 0.338 31 99 0 8 0.413 31 100 0 8 0.398 31 101 0 8 0.323 32 33 0 8 0.992 32 34 0 8 0.991 32 37 0 8 0.323 32 49 0 8 0.464 32 50 0 8 0.443 32 51 0 8 0.279 32 97 0 8 0.324 32 98 0 8 0.378 32 99 0 8 0.395 32 100 0 8 0.321 33 34 0 8 0.993 33 35 0 8 0.980 33 36 0 8 0.424 33 37 0 8 0.507 33 49 0 8 0.420 33 50 0 8 0.269 33 97 0 8 0.304 33 98 0 8 0.336 33 99 0 8 0.283 34 35 0 8 0.996 34 36 0 8 0.989 34 37 0 8 0.535 35 36 0 8 0.993 35 37 0 8 0.979 36 37 0 8 0.994 36 38 0 8 0.946 37 38 0 8 0.996 37 39 0 8 0.943 37 40 0 8 0.394 37 41 0 8 0.594 37 43 0 8 0.315 37 44 0 8 0.341 38 39 0 8 0.994 38 40 0 8 0.990 38 41 0 8 0.714 39 40 0 8 0.994 39 41 0 8 0.993 39 42 0 8 0.441 40 41 0 8 0.996 40 42 0 8 0.988 41 42 0 8 0.995 41 43 0 8 0.989 42 43 0 8 0.996 42 44 0 8 0.980 43 44 0 8 0.992 43 45 0 8 0.989 43 46 0 8 0.254 43 47 0 8 0.260 44 45 0 8 0.992 44 46 0 8 0.993 44 47 0 8 0.760 44 48 0 8 0.347 44 49 0 8 0.306 45 46 0 8 0.995 45 47 0 8 0.996 45 48 0 8 0.421 46 47 0 8 0.996 46 48 0 8 0.952 46 49 0 8 0.375 47 48 0 8 0.995 47 49 0 8 0.995 48 49 0 8 0.992 48 50 0 8 0.983 49 50 0 8 0.995 49 51 0 8 0.991 49 52 0 8 0.286 49 101 0 8 0.300 49 102 0 8 0.264 50 51 0 8 0.997 50 52 0 8 0.988 50 99 0 8 0.280 50 100 0 8 0.321 50 101 0 8 0.346 51 52 0 8 0.998 51 53 0 8 0.991 51 98 0 8 0.282 51 99 0 8 0.298 51 100 0 8 0.285 52 53 0 8 0.991 52 54 0 8 0.980 52 55 0 8 0.335 52 57 0 8 0.425 52 97 0 8 0.304 52 98 0 8 0.301 52 99 0 8 0.288 53 54 0 8 0.996 53 55 0 8 0.995 53 56 0 8 0.577 53 57 0 8 0.469 53 58 0 8 0.304 53 59 0 8 0.334 54 55 0 8 0.997 54 56 0 8 0.994 54 57 0 8 0.529 54 58 0 8 0.564 54 59 0 8 0.326 55 56 0 8 0.994 55 57 0 8 0.993 55 58 0 8 0.948 55 59 0 8 0.927 56 57 0 8 0.994 56 58 0 8 0.987 56 59 0 8 0.991 56 60 0 8 0.951 57 58 0 8 0.995 57 59 0 8 0.997 57 60 0 8 0.997 57 61 0 8 0.995 58 59 0 8 0.996 58 60 0 8 0.994 58 61 0 8 0.994 58 62 0 8 0.987 59 60 0 8 0.997 59 61 0 8 0.997 59 62 0 8 0.987 59 63 0 8 0.986 60 61 0 8 0.998 60 62 0 8 0.995 60 63 0 8 0.994 60 64 0 8 0.994 61 62 0 8 0.996 61 63 0 8 0.994 61 64 0 8 0.993 61 65 0 8 0.997 62 63 0 8 0.993 62 64 0 8 0.988 62 65 0 8 0.996 62 66 0 8 0.991 63 64 0 8 0.991 63 65 0 8 0.993 63 66 0 8 0.993 63 67 0 8 0.985 64 65 0 8 0.995 64 66 0 8 0.989 64 67 0 8 0.991 64 68 0 8 0.994 65 66 0 8 0.996 65 67 0 8 0.994 65 68 0 8 0.997 65 69 0 8 0.996 66 67 0 8 0.992 66 68 0 8 0.996 66 69 0 8 0.992 66 70 0 8 0.925 67 68 0 8 0.995 67 69 0 8 0.992 67 70 0 8 0.994 67 71 0 8 0.604 68 69 0 8 0.998 68 70 0 8 0.995 68 71 0 8 0.923 68 72 0 8 0.592 68 73 0 8 0.338 68 74 0 8 0.378 69 70 0 8 0.996 69 71 0 8 0.996 69 72 0 8 0.700 69 73 0 8 0.590 69 74 0 8 0.711 69 76 0 8 0.302 70 71 0 8 0.996 70 72 0 8 0.997 70 73 0 8 0.602 70 74 0 8 0.362 71 72 0 8 0.995 71 73 0 8 0.995 71 74 0 8 0.387 72 73 0 8 0.995 72 74 0 8 0.994 73 74 0 8 0.996 73 75 0 8 0.987 74 75 0 8 0.994 74 76 0 8 0.994 74 77 0 8 0.415 74 78 0 8 0.354 75 76 0 8 0.967 75 77 0 8 0.986 76 77 0 8 0.991 76 78 0 8 0.986 77 78 0 8 0.995 77 79 0 8 0.977 78 79 0 8 0.988 78 80 0 8 0.996 78 81 0 8 0.740 78 82 0 8 0.400 78 83 0 8 0.519 79 80 0 8 0.997 79 81 0 8 0.994 79 82 0 8 0.896 79 83 0 8 0.674 80 81 0 8 0.998 80 82 0 8 0.997 80 83 0 8 0.922 80 84 0 8 0.716 81 82 0 8 0.996 81 83 0 8 0.997 81 84 0 8 0.902 81 85 0 8 0.400 82 83 0 8 0.980 82 84 0 8 0.997 82 85 0 8 0.684 83 84 0 8 0.996 83 85 0 8 0.990 83 86 0 8 0.446 84 85 0 8 0.996 84 86 0 8 0.996 84 87 0 8 0.526 84 88 0 8 0.252 84 90 0 8 0.314 85 86 0 8 0.997 85 87 0 8 0.990 85 88 0 8 0.330 85 89 0 8 0.252 85 90 0 8 0.334 86 87 0 8 0.993 86 88 0 8 0.994 86 89 0 8 0.495 86 90 0 8 0.750 87 88 0 8 0.994 87 89 0 8 0.991 87 90 0 8 0.988 87 91 0 8 0.956 88 89 0 8 0.988 88 90 0 8 0.993 88 91 0 8 0.994 88 92 0 8 0.975 89 90 0 8 0.993 89 91 0 8 0.993 89 92 0 8 0.988 89 93 0 8 0.989 90 91 0 8 0.990 90 92 0 8 0.993 90 93 0 8 0.996 90 94 0 8 0.986 91 92 0 8 0.992 91 93 0 8 0.993 91 94 0 8 0.992 91 95 0 8 0.975 92 93 0 8 0.993 92 94 0 8 0.995 92 95 0 8 0.993 92 96 0 8 0.923 93 94 0 8 0.998 93 95 0 8 0.995 93 96 0 8 0.993 93 97 0 8 0.927 94 95 0 8 0.994 94 96 0 8 0.993 94 97 0 8 0.954 94 98 0 8 0.472 95 96 0 8 0.986 95 97 0 8 0.994 96 97 0 8 0.995 96 98 0 8 0.929 97 98 0 8 0.997 97 99 0 8 0.996 97 100 0 8 0.282 98 99 0 8 0.997 98 100 0 8 0.997 99 100 0 8 0.998 99 101 0 8 0.998 100 101 0 8 0.998 100 102 0 8 0.985 101 102 0 8 0.993 101 103 0 8 0.969 102 103 0 8 0.975 102 104 0 8 0.971 103 104 0 8 0.977 103 105 0 8 0.944 103 106 0 8 0.525 104 105 0 8 0.979 104 106 0 8 0.981 104 107 0 8 0.391 105 106 0 8 0.995 105 107 0 8 0.995 105 108 0 8 0.417 106 107 0 8 0.993 106 108 0 8 0.995 106 109 0 8 0.469 107 108 0 8 0.991 107 109 0 8 0.995 107 110 0 8 0.372 108 109 0 8 0.993 108 110 0 8 0.994 108 111 0 8 0.259 109 110 0 8 0.994 109 111 0 8 0.990 110 111 0 8 0.993 110 112 0 8 0.993 111 112 0 8 0.992 111 113 0 8 0.986 111 114 0 8 0.294 112 113 0 8 0.990 112 114 0 8 0.986 113 114 0 8 0.993 REMARK 6 RANDOM_SEED = 1022730538 REMARK 6 FIRST_SEED = 1022730538 REMARK 6 TRIAL = 1 REMARK 6 OPTIONS = see current file's name REMARK 6 Reconstruction phase = Adaptation_3[500] REMARK 6 Missed Contacts = 231 REMARK 6 Spurious Contacts = 554 REMARK 6 Correct Contacts = 1150 REMARK 6 Total non-self Contacts in reconstructed map = 1704 REMARK 6 Total non-self Contacts in original map = 1381 REMARK 6 Cindex0 = 554 REMARK 6 Cindex1 = 6.88596 REMARK 6 Cindex2 = 14.8149 REMARK 6 Cprecision = 0.674883 REMARK 6 Crecall = 0.83273 REMARK 6 Cf1 = 0.745543 REMARK 6 structure chosen = reconstructed REMARK 6 rms (reconstructed, native) = 0 REMARK 6 rms (mirrored_reconstructed, native) = 0 ATOM 1 CA MET 16.209 -3.996 -11.686 1.00 0.00 ATOM 2 CA THR 16.362 -0.247 -11.149 1.00 0.00 ATOM 3 CA SER 12.752 0.722 -10.661 1.00 0.00 ATOM 4 CA PHE 9.246 2.061 -11.362 1.00 0.00 ATOM 5 CA ALA 11.338 -0.796 -10.020 1.00 0.00 ATOM 6 CA GLN 8.896 -1.488 -12.839 1.00 0.00 ATOM 7 CA LEU 5.592 -0.515 -14.450 1.00 0.00 ATOM 8 CA ASP 9.005 -1.289 -15.819 1.00 0.00 ATOM 9 CA ILE 5.389 -0.312 -16.674 1.00 0.00 ATOM 10 CA LYS 7.660 0.523 -19.564 1.00 0.00 ATOM 11 CA SER 9.619 2.317 -22.169 1.00 0.00 ATOM 12 CA GLU 11.369 5.607 -22.840 1.00 0.00 ATOM 13 CA GLU 10.964 6.969 -19.333 1.00 0.00 ATOM 14 CA LEU 9.554 7.017 -15.838 1.00 0.00 ATOM 15 CA ALA 9.476 9.837 -18.402 1.00 0.00 ATOM 16 CA ILE 5.935 9.713 -16.919 1.00 0.00 ATOM 17 CA VAL 6.059 8.941 -20.613 1.00 0.00 ATOM 18 CA LYS 5.477 11.879 -22.909 1.00 0.00 ATOM 19 CA THR 1.703 12.131 -22.556 1.00 0.00 ATOM 20 CA ILE -0.002 9.748 -20.133 1.00 0.00 ATOM 21 CA LEU 0.647 11.608 -16.887 1.00 0.00 ATOM 22 CA GLN -0.944 14.367 -18.882 1.00 0.00 ATOM 23 CA GLN -3.173 11.964 -17.030 1.00 0.00 ATOM 24 CA LEU -3.103 8.313 -16.067 1.00 0.00 ATOM 25 CA VAL -1.738 5.474 -18.176 1.00 0.00 ATOM 26 CA PRO 1.753 5.000 -19.418 1.00 0.00 ATOM 27 CA ASP 4.594 4.870 -16.870 1.00 0.00 ATOM 28 CA TYR 1.871 7.266 -15.668 1.00 0.00 ATOM 29 CA THR 4.875 5.006 -15.454 1.00 0.00 ATOM 30 CA VAL 3.898 3.623 -12.089 1.00 0.00 ATOM 31 CA TRP 4.893 2.454 -8.647 1.00 0.00 ATOM 32 CA ALA 3.529 1.401 -5.255 1.00 0.00 ATOM 33 CA PHE 0.126 0.268 -3.895 1.00 0.00 ATOM 34 CA GLY 0.902 2.933 -1.297 1.00 0.00 ATOM 35 CA SER -0.061 4.373 2.082 1.00 0.00 ATOM 36 CA ARG -3.135 3.874 -0.206 1.00 0.00 ATOM 37 CA VAL -4.653 2.292 -3.305 1.00 0.00 ATOM 38 CA LYS -4.878 2.043 0.584 1.00 0.00 ATOM 39 CA GLY -2.659 -0.467 2.386 1.00 0.00 ATOM 40 CA LYS 0.780 -1.624 1.411 1.00 0.00 ATOM 41 CA ALA 4.022 -2.334 -0.556 1.00 0.00 ATOM 42 CA LYS 0.564 -3.688 0.221 1.00 0.00 ATOM 43 CA LYS 3.181 -3.509 -2.468 1.00 0.00 ATOM 44 CA TYR 0.296 -4.640 -4.709 1.00 0.00 ATOM 45 CA SER 1.036 -8.113 -6.171 1.00 0.00 ATOM 46 CA ASP 0.207 -6.739 -9.631 1.00 0.00 ATOM 47 CA LEU 0.009 -2.988 -9.722 1.00 0.00 ATOM 48 CA ASP 3.495 -4.486 -9.275 1.00 0.00 ATOM 49 CA LEU 1.660 -1.178 -8.961 1.00 0.00 ATOM 50 CA ALA 0.539 2.425 -8.365 1.00 0.00 ATOM 51 CA ILE 1.715 5.650 -6.967 1.00 0.00 ATOM 52 CA ILE 4.598 8.068 -6.204 1.00 0.00 ATOM 53 CA SER 4.507 11.839 -6.157 1.00 0.00 ATOM 54 CA GLU 2.536 13.999 -8.588 1.00 0.00 ATOM 55 CA GLU -0.184 16.561 -9.160 1.00 0.00 ATOM 56 CA PRO -2.743 13.769 -9.559 1.00 0.00 ATOM 57 CA LEU -3.490 10.087 -9.640 1.00 0.00 ATOM 58 CA ASP -3.097 12.985 -7.158 1.00 0.00 ATOM 59 CA PHE -3.294 9.271 -7.880 1.00 0.00 ATOM 60 CA LEU -3.281 5.559 -7.302 1.00 0.00 ATOM 61 CA ALA -3.255 8.456 -4.903 1.00 0.00 ATOM 62 CA ARG -4.660 11.288 -2.725 1.00 0.00 ATOM 63 CA ASP -7.063 14.124 -3.731 1.00 0.00 ATOM 64 CA ARG -9.398 14.892 -6.610 1.00 0.00 ATOM 65 CA LEU -8.689 12.710 -9.603 1.00 0.00 ATOM 66 CA LYS -11.327 12.544 -6.851 1.00 0.00 ATOM 67 CA GLU -8.914 10.354 -8.827 1.00 0.00 ATOM 68 CA ALA -7.364 6.956 -9.638 1.00 0.00 ATOM 69 CA PHE -7.690 8.907 -12.889 1.00 0.00 ATOM 70 CA SER -11.149 10.018 -13.850 1.00 0.00 ATOM 71 CA GLU -13.548 12.665 -15.143 1.00 0.00 ATOM 72 CA SER -16.282 11.880 -12.686 1.00 0.00 ATOM 73 CA ASP -18.792 9.290 -11.595 1.00 0.00 ATOM 74 CA LEU -16.500 8.066 -14.382 1.00 0.00 ATOM 75 CA PRO -17.184 10.061 -17.526 1.00 0.00 ATOM 76 CA TRP -15.239 7.474 -15.592 1.00 0.00 ATOM 77 CA ARG -12.651 8.205 -18.303 1.00 0.00 ATOM 78 CA VAL -9.112 6.950 -17.690 1.00 0.00 ATOM 79 CA ASP -8.791 5.581 -21.226 1.00 0.00 ATOM 80 CA LEU -6.784 4.765 -18.163 1.00 0.00 ATOM 81 CA LEU -5.482 3.380 -14.950 1.00 0.00 ATOM 82 CA ASP -8.247 1.935 -12.747 1.00 0.00 ATOM 83 CA TRP -4.922 3.439 -11.798 1.00 0.00 ATOM 84 CA ALA -6.493 0.038 -11.146 1.00 0.00 ATOM 85 CA THR -9.433 -1.943 -9.806 1.00 0.00 ATOM 86 CA THR -11.740 -3.718 -12.243 1.00 0.00 ATOM 87 CA SER -12.967 -4.454 -15.811 1.00 0.00 ATOM 88 CA GLU -9.913 -6.591 -16.086 1.00 0.00 ATOM 89 CA ASP -11.078 -3.781 -18.466 1.00 0.00 ATOM 90 CA PHE -9.390 -0.450 -19.458 1.00 0.00 ATOM 91 CA ARG -8.958 -4.135 -20.183 1.00 0.00 ATOM 92 CA GLU -6.085 -3.939 -17.721 1.00 0.00 ATOM 93 CA ILE -4.297 -0.587 -17.543 1.00 0.00 ATOM 94 CA ILE -3.032 1.214 -20.656 1.00 0.00 ATOM 95 CA ARG -1.437 -2.191 -20.619 1.00 0.00 ATOM 96 CA LYS 0.293 -2.625 -17.270 1.00 0.00 ATOM 97 CA VAL 0.435 1.076 -16.332 1.00 0.00 ATOM 98 CA TYR -0.881 0.718 -12.852 1.00 0.00 ATOM 99 CA VAL -0.703 4.551 -13.079 1.00 0.00 ATOM 100 CA VAL 0.388 7.649 -11.134 1.00 0.00 ATOM 101 CA ILE 4.000 8.917 -11.224 1.00 0.00 ATOM 102 CA GLN 7.276 10.504 -10.287 1.00 0.00 ATOM 103 CA GLU 9.981 9.790 -7.656 1.00 0.00 ATOM 104 CA LYS 12.722 12.149 -6.718 1.00 0.00 ATOM 105 CA GLU 16.554 12.159 -7.083 1.00 0.00 ATOM 106 CA LYS 17.232 15.866 -7.067 1.00 0.00 ATOM 107 CA THR 20.335 13.630 -7.369 1.00 0.00 ATOM 108 CA VAL 19.782 15.211 -3.984 1.00 0.00 ATOM 109 CA GLU 23.319 16.324 -3.237 1.00 0.00 ATOM 110 CA LYS 25.155 13.089 -2.398 1.00 0.00 ATOM 111 CA PRO 26.931 11.072 0.402 1.00 0.00 ATOM 112 CA THR 24.873 9.946 3.389 1.00 0.00 ATOM 113 CA ALA 26.516 11.729 6.244 1.00 0.00 ATOM 114 CA LEU 24.020 13.370 8.591 1.00 0.00