From baldig@genome.ICS.UCI.EDU Sun Jul 21 11:48:20 2002 Date: Wed, 05 Jun 2002 14:04:06 -0700 From: Baldis Research Group To: eva_casp@maple.bioc.columbia.edu Subject: CMapPro, CMap23Dpro response to T0131 Query_name: T0131 Query_length: 100 Prediction: MSLKLVEILVLGQVLRLNVPIEQEELLRQAARNLDILVSEMKEKTGLIQLDRVLSIVALN CCCCCEEEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LSFELSQEKNKTAKIEEVLRTGIQQLDHSLENIRVTKEPH HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC 1 2 0 8 0.974 1 3 0 8 0.984 1 4 0 8 0.416 1 5 0 8 0.437 2 3 0 8 0.992 2 4 0 8 0.991 2 5 0 8 0.479 3 4 0 8 0.994 3 5 0 8 0.995 4 5 0 8 0.995 4 6 0 8 0.981 5 6 0 8 0.995 5 7 0 8 0.966 6 7 0 8 0.992 6 8 0 8 0.994 6 17 0 8 0.342 7 8 0 8 0.994 7 9 0 8 0.974 7 15 0 8 0.256 7 16 0 8 0.282 7 17 0 8 0.257 8 9 0 8 0.997 8 10 0 8 0.994 8 14 0 8 0.300 8 15 0 8 0.411 8 16 0 8 0.274 8 17 0 8 0.254 9 10 0 8 0.997 9 11 0 8 0.997 9 13 0 8 0.338 9 14 0 8 0.460 9 15 0 8 0.553 9 16 0 8 0.270 10 11 0 8 0.997 10 12 0 8 0.992 10 13 0 8 0.419 10 14 0 8 0.499 10 15 0 8 0.363 11 12 0 8 0.995 11 13 0 8 0.991 11 14 0 8 0.505 12 13 0 8 0.995 12 14 0 8 0.958 13 14 0 8 0.992 13 15 0 8 0.960 14 15 0 8 0.997 14 16 0 8 0.972 15 16 0 8 0.997 15 17 0 8 0.995 16 17 0 8 0.993 16 18 0 8 0.966 17 18 0 8 0.984 17 19 0 8 0.995 17 21 0 8 0.271 18 19 0 8 0.994 18 20 0 8 0.986 19 20 0 8 0.991 19 21 0 8 0.994 19 22 0 8 0.458 19 23 0 8 0.713 19 24 0 8 0.440 20 21 0 8 0.996 20 22 0 8 0.995 20 23 0 8 0.941 20 24 0 8 0.964 21 22 0 8 0.994 21 23 0 8 0.994 21 24 0 8 0.995 21 25 0 8 0.991 22 23 0 8 0.992 22 24 0 8 0.991 22 25 0 8 0.986 22 26 0 8 0.995 23 24 0 8 0.990 23 25 0 8 0.991 23 26 0 8 0.994 23 27 0 8 0.995 24 25 0 8 0.990 24 26 0 8 0.995 24 27 0 8 0.992 24 28 0 8 0.975 25 26 0 8 0.995 25 27 0 8 0.995 25 28 0 8 0.991 25 29 0 8 0.976 26 27 0 8 0.998 26 28 0 8 0.995 26 29 0 8 0.995 26 30 0 8 0.997 27 28 0 8 0.997 27 29 0 8 0.994 27 30 0 8 0.997 27 31 0 8 0.998 28 29 0 8 0.992 28 30 0 8 0.995 28 31 0 8 0.996 28 32 0 8 0.989 29 30 0 8 0.994 29 31 0 8 0.995 29 32 0 8 0.990 29 33 0 8 0.965 30 31 0 8 0.998 30 32 0 8 0.995 30 33 0 8 0.994 30 34 0 8 0.997 31 32 0 8 0.995 31 33 0 8 0.995 31 34 0 8 0.998 31 35 0 8 0.988 32 33 0 8 0.991 32 34 0 8 0.993 32 35 0 8 0.993 32 36 0 8 0.987 33 34 0 8 0.993 33 35 0 8 0.986 33 36 0 8 0.994 33 37 0 8 0.993 34 35 0 8 0.995 34 36 0 8 0.997 34 37 0 8 0.998 34 38 0 8 0.996 35 36 0 8 0.995 35 37 0 8 0.996 35 38 0 8 0.995 35 39 0 8 0.976 36 37 0 8 0.998 36 38 0 8 0.997 36 39 0 8 0.993 36 40 0 8 0.990 37 38 0 8 0.998 37 39 0 8 0.995 37 40 0 8 0.993 37 41 0 8 0.996 38 39 0 8 0.995 38 40 0 8 0.995 38 41 0 8 0.997 38 42 0 8 0.996 39 40 0 8 0.992 39 41 0 8 0.995 39 42 0 8 0.992 39 43 0 8 0.992 40 41 0 8 0.995 40 42 0 8 0.992 40 43 0 8 0.984 40 44 0 8 0.990 41 42 0 8 0.996 41 43 0 8 0.994 41 44 0 8 0.994 41 45 0 8 0.963 41 46 0 8 0.350 41 47 0 8 0.401 41 48 0 8 0.253 42 43 0 8 0.994 42 44 0 8 0.989 42 45 0 8 0.991 42 46 0 8 0.888 42 47 0 8 0.583 43 44 0 8 0.993 43 45 0 8 0.991 43 46 0 8 0.903 43 47 0 8 0.585 44 45 0 8 0.994 44 46 0 8 0.993 44 47 0 8 0.587 45 46 0 8 0.994 45 47 0 8 0.995 45 48 0 8 0.340 46 47 0 8 0.995 46 48 0 8 0.993 47 48 0 8 0.998 47 49 0 8 0.993 47 50 0 8 0.580 47 52 0 8 0.306 47 53 0 8 0.312 48 49 0 8 0.996 48 50 0 8 0.998 48 51 0 8 0.558 48 52 0 8 0.801 48 53 0 8 0.659 49 50 0 8 0.997 49 51 0 8 0.995 49 52 0 8 0.983 49 53 0 8 0.975 50 51 0 8 0.995 50 52 0 8 0.994 50 53 0 8 0.997 50 54 0 8 0.996 51 52 0 8 0.991 51 53 0 8 0.994 51 54 0 8 0.993 51 55 0 8 0.990 52 53 0 8 0.995 52 54 0 8 0.995 52 55 0 8 0.993 52 56 0 8 0.975 53 54 0 8 0.998 53 55 0 8 0.997 53 56 0 8 0.998 53 57 0 8 0.997 54 55 0 8 0.998 54 56 0 8 0.998 54 57 0 8 0.997 54 58 0 8 0.997 55 56 0 8 0.997 55 57 0 8 0.997 55 58 0 8 0.997 55 59 0 8 0.995 56 57 0 8 0.998 56 58 0 8 0.998 56 59 0 8 0.998 56 60 0 8 0.978 57 58 0 8 0.998 57 59 0 8 0.998 57 60 0 8 0.994 57 61 0 8 0.997 58 59 0 8 0.998 58 60 0 8 0.994 58 61 0 8 0.998 58 62 0 8 0.997 59 60 0 8 0.996 59 61 0 8 0.998 59 62 0 8 0.996 59 63 0 8 0.998 60 61 0 8 0.994 60 62 0 8 0.996 60 63 0 8 0.993 60 64 0 8 0.987 61 62 0 8 0.997 61 63 0 8 0.997 61 64 0 8 0.992 61 65 0 8 0.998 62 63 0 8 0.998 62 64 0 8 0.996 62 65 0 8 0.997 62 66 0 8 0.993 63 64 0 8 0.995 63 65 0 8 0.998 63 66 0 8 0.992 63 67 0 8 0.984 64 65 0 8 0.995 64 66 0 8 0.994 64 67 0 8 0.991 64 68 0 8 0.994 65 66 0 8 0.995 65 67 0 8 0.995 65 68 0 8 0.993 65 69 0 8 0.996 66 67 0 8 0.991 66 68 0 8 0.992 66 69 0 8 0.992 66 70 0 8 0.993 67 68 0 8 0.991 67 69 0 8 0.989 67 70 0 8 0.991 67 71 0 8 0.924 68 69 0 8 0.989 68 70 0 8 0.991 68 71 0 8 0.994 68 72 0 8 0.744 69 70 0 8 0.994 69 71 0 8 0.993 69 72 0 8 0.938 69 73 0 8 0.535 70 71 0 8 0.995 70 72 0 8 0.995 70 73 0 8 0.644 71 72 0 8 0.995 71 73 0 8 0.993 71 74 0 8 0.369 71 75 0 8 0.272 72 73 0 8 0.995 72 74 0 8 0.993 72 75 0 8 0.481 73 74 0 8 0.995 73 75 0 8 0.996 73 76 0 8 0.472 73 77 0 8 0.547 73 78 0 8 0.360 74 75 0 8 0.996 74 76 0 8 0.996 74 77 0 8 0.983 74 78 0 8 0.940 75 76 0 8 0.995 75 77 0 8 0.993 75 78 0 8 0.997 75 79 0 8 0.996 76 77 0 8 0.991 76 78 0 8 0.995 76 79 0 8 0.994 76 80 0 8 0.988 77 78 0 8 0.995 77 79 0 8 0.994 77 80 0 8 0.992 77 81 0 8 0.978 78 79 0 8 0.998 78 80 0 8 0.994 78 81 0 8 0.993 78 82 0 8 0.996 79 80 0 8 0.995 79 81 0 8 0.994 79 82 0 8 0.997 79 83 0 8 0.998 80 81 0 8 0.991 80 82 0 8 0.995 80 83 0 8 0.994 80 84 0 8 0.989 81 82 0 8 0.994 81 83 0 8 0.994 81 84 0 8 0.990 81 85 0 8 0.981 82 83 0 8 0.997 82 84 0 8 0.995 82 85 0 8 0.994 82 86 0 8 0.996 83 84 0 8 0.996 83 85 0 8 0.995 83 86 0 8 0.997 83 87 0 8 0.994 84 85 0 8 0.989 84 86 0 8 0.995 84 87 0 8 0.992 84 88 0 8 0.988 85 86 0 8 0.994 85 87 0 8 0.990 85 88 0 8 0.982 85 89 0 8 0.986 86 87 0 8 0.995 86 88 0 8 0.993 86 89 0 8 0.995 86 90 0 8 0.998 87 88 0 8 0.990 87 89 0 8 0.992 87 90 0 8 0.995 87 91 0 8 0.992 88 89 0 8 0.990 88 90 0 8 0.995 88 91 0 8 0.992 88 92 0 8 0.961 89 90 0 8 0.994 89 91 0 8 0.989 89 92 0 8 0.993 89 93 0 8 0.898 90 91 0 8 0.994 90 92 0 8 0.996 90 93 0 8 0.974 90 94 0 8 0.571 90 95 0 8 0.314 91 92 0 8 0.995 91 93 0 8 0.996 91 94 0 8 0.445 92 93 0 8 0.993 92 94 0 8 0.988 93 94 0 8 0.995 93 95 0 8 0.995 94 95 0 8 0.996 94 96 0 8 0.992 95 96 0 8 0.995 95 97 0 8 0.996 95 98 0 8 0.452 96 97 0 8 0.993 96 98 0 8 0.992 96 99 0 8 0.281 97 98 0 8 0.993 97 99 0 8 0.988 98 99 0 8 0.992 98 100 0 8 0.971 99 100 0 8 0.936 REMARK 6 RANDOM_SEED = 804782079 REMARK 6 FIRST_SEED = 1023310929 REMARK 6 TRIAL = 4 REMARK 6 OPTIONS = see current file's name REMARK 6 Reconstruction phase = Adaptation_3[500] REMARK 6 Missed Contacts = 61 REMARK 6 Spurious Contacts = 331 REMARK 6 Correct Contacts = 959 REMARK 6 Total non-self Contacts in reconstructed map = 1290 REMARK 6 Total non-self Contacts in original map = 1020 REMARK 6 Cindex0 = 331 REMARK 6 Cindex1 = 3.92 REMARK 6 Cindex2 = 10.54 REMARK 6 Cprecision = 0.743411 REMARK 6 Crecall = 0.940196 REMARK 6 Cf1 = 0.830303 REMARK 6 structure chosen = reconstructed REMARK 6 rms (reconstructed, native) = 0 REMARK 6 rms (mirrored_reconstructed, native) = 0 ATOM 1 CA MET 18.962 21.073 0.903 1.00 0.00 ATOM 2 CA SER 19.513 24.722 0.040 1.00 0.00 ATOM 3 CA LEU 22.079 22.226 1.201 1.00 0.00 ATOM 4 CA LYS 22.934 20.664 -2.189 1.00 0.00 ATOM 5 CA LEU 23.240 19.453 -5.769 1.00 0.00 ATOM 6 CA VAL 24.386 19.199 -9.398 1.00 0.00 ATOM 7 CA GLU 26.436 16.670 -7.502 1.00 0.00 ATOM 8 CA ILE 27.707 17.301 -11.084 1.00 0.00 ATOM 9 CA LEU 25.266 14.338 -11.459 1.00 0.00 ATOM 10 CA VAL 24.908 10.725 -12.635 1.00 0.00 ATOM 11 CA LEU 23.359 12.194 -15.790 1.00 0.00 ATOM 12 CA GLY 24.895 9.964 -18.363 1.00 0.00 ATOM 13 CA GLN 27.906 7.678 -18.237 1.00 0.00 ATOM 14 CA VAL 27.914 11.526 -17.791 1.00 0.00 ATOM 15 CA LEU 29.016 12.948 -14.481 1.00 0.00 ATOM 16 CA ARG 30.016 10.266 -12.102 1.00 0.00 ATOM 17 CA LEU 29.025 12.094 -8.947 1.00 0.00 ATOM 18 CA ASN 29.986 9.925 -6.011 1.00 0.00 ATOM 19 CA VAL 33.564 10.052 -4.689 1.00 0.00 ATOM 20 CA PRO 33.131 11.278 -1.170 1.00 0.00 ATOM 21 CA ILE 34.210 14.485 -2.794 1.00 0.00 ATOM 22 CA GLU 35.065 18.051 -1.633 1.00 0.00 ATOM 23 CA GLN 37.380 15.953 -3.618 1.00 0.00 ATOM 24 CA GLU 36.287 19.533 -4.323 1.00 0.00 ATOM 25 CA GLU 35.223 17.847 -7.455 1.00 0.00 ATOM 26 CA LEU 31.503 18.253 -7.454 1.00 0.00 ATOM 27 CA LEU 29.046 20.845 -6.401 1.00 0.00 ATOM 28 CA ARG 32.205 22.466 -7.564 1.00 0.00 ATOM 29 CA GLN 33.522 23.076 -11.109 1.00 0.00 ATOM 30 CA ALA 31.078 20.667 -12.636 1.00 0.00 ATOM 31 CA ALA 27.917 22.265 -11.310 1.00 0.00 ATOM 32 CA ARG 29.151 25.818 -11.817 1.00 0.00 ATOM 33 CA ASN 31.045 27.662 -14.449 1.00 0.00 ATOM 34 CA LEU 28.620 24.898 -15.424 1.00 0.00 ATOM 35 CA ASP 31.892 24.381 -17.201 1.00 0.00 ATOM 36 CA ILE 29.829 21.298 -18.126 1.00 0.00 ATOM 37 CA LEU 26.677 22.833 -19.658 1.00 0.00 ATOM 38 CA VAL 29.882 20.765 -19.942 1.00 0.00 ATOM 39 CA SER 30.808 22.570 -23.080 1.00 0.00 ATOM 40 CA GLU 29.897 25.190 -25.684 1.00 0.00 ATOM 41 CA MET 28.229 21.840 -25.407 1.00 0.00 ATOM 42 CA LYS 28.380 24.570 -28.042 1.00 0.00 ATOM 43 CA GLU 30.765 22.307 -29.893 1.00 0.00 ATOM 44 CA LYS 33.445 24.874 -29.351 1.00 0.00 ATOM 45 CA THR 35.004 21.451 -29.352 1.00 0.00 ATOM 46 CA GLY 37.649 18.867 -28.377 1.00 0.00 ATOM 47 CA LEU 34.027 18.325 -27.457 1.00 0.00 ATOM 48 CA ILE 30.350 17.596 -28.119 1.00 0.00 ATOM 49 CA GLN 32.448 14.437 -27.813 1.00 0.00 ATOM 50 CA LEU 30.401 14.261 -24.692 1.00 0.00 ATOM 51 CA ASP 31.868 10.763 -25.059 1.00 0.00 ATOM 52 CA ARG 31.606 11.659 -21.355 1.00 0.00 ATOM 53 CA VAL 31.863 14.481 -18.843 1.00 0.00 ATOM 54 CA LEU 32.337 17.349 -16.332 1.00 0.00 ATOM 55 CA SER 30.355 15.887 -19.174 1.00 0.00 ATOM 56 CA ILE 27.125 16.666 -17.351 1.00 0.00 ATOM 57 CA VAL 23.836 17.085 -19.218 1.00 0.00 ATOM 58 CA ALA 26.252 16.729 -16.370 1.00 0.00 ATOM 59 CA LEU 22.583 17.350 -15.860 1.00 0.00 ATOM 60 CA ASN 19.154 17.720 -17.448 1.00 0.00 ATOM 61 CA LEU 21.500 18.914 -14.727 1.00 0.00 ATOM 62 CA SER 23.605 22.017 -14.249 1.00 0.00 ATOM 63 CA PHE 20.866 21.962 -11.570 1.00 0.00 ATOM 64 CA GLU 21.417 25.771 -11.855 1.00 0.00 ATOM 65 CA LEU 19.376 22.530 -11.802 1.00 0.00 ATOM 66 CA SER 17.816 25.841 -12.817 1.00 0.00 ATOM 67 CA GLN 17.384 29.200 -14.474 1.00 0.00 ATOM 68 CA GLU 15.048 27.759 -17.208 1.00 0.00 ATOM 69 CA LYS 13.442 25.137 -19.422 1.00 0.00 ATOM 70 CA ASN 13.087 27.365 -16.307 1.00 0.00 ATOM 71 CA LYS 11.676 27.489 -12.756 1.00 0.00 ATOM 72 CA THR 14.261 28.460 -10.173 1.00 0.00 ATOM 73 CA ALA 11.542 25.918 -11.001 1.00 0.00 ATOM 74 CA LYS 9.714 23.124 -9.171 1.00 0.00 ATOM 75 CA ILE 13.001 22.914 -11.054 1.00 0.00 ATOM 76 CA GLU 10.559 20.426 -12.452 1.00 0.00 ATOM 77 CA GLU 12.410 17.678 -14.223 1.00 0.00 ATOM 78 CA VAL 16.045 18.722 -13.604 1.00 0.00 ATOM 79 CA LEU 18.525 17.512 -11.007 1.00 0.00 ATOM 80 CA ARG 15.320 15.513 -10.548 1.00 0.00 ATOM 81 CA THR 12.241 13.322 -10.617 1.00 0.00 ATOM 82 CA GLY 14.181 12.981 -13.879 1.00 0.00 ATOM 83 CA ILE 17.667 12.740 -15.341 1.00 0.00 ATOM 84 CA GLN 14.732 10.429 -14.559 1.00 0.00 ATOM 85 CA GLN 17.311 9.177 -12.075 1.00 0.00 ATOM 86 CA LEU 19.013 12.097 -10.379 1.00 0.00 ATOM 87 CA ASP 16.808 9.365 -8.874 1.00 0.00 ATOM 88 CA HIS 15.603 5.863 -8.310 1.00 0.00 ATOM 89 CA SER 19.190 6.911 -7.559 1.00 0.00 ATOM 90 CA LEU 22.290 8.691 -8.579 1.00 0.00 ATOM 91 CA GLU 21.249 5.307 -7.053 1.00 0.00 ATOM 92 CA ASN 19.579 2.114 -5.680 1.00 0.00 ATOM 93 CA ILE 18.265 4.140 -2.727 1.00 0.00 ATOM 94 CA ARG 19.471 6.897 -0.481 1.00 0.00 ATOM 95 CA VAL 16.526 8.778 0.787 1.00 0.00 ATOM 96 CA THR 19.751 9.232 2.822 1.00 0.00 ATOM 97 CA LYS 18.787 6.149 4.888 1.00 0.00 ATOM 98 CA GLU 19.753 5.820 8.530 1.00 0.00 ATOM 99 CA PRO 18.549 9.238 9.580 1.00 0.00 ATOM 100 CA HIS 21.954 9.733 7.838 1.00 0.00