From baldig@genome.ICS.UCI.EDU Sun Jul 21 11:50:54 2002 Date: Thu, 13 Jun 2002 10:48:11 -0700 From: Baldis Research Group To: eva_casp@maple.bioc.columbia.edu Subject: CMapPro, CMap23Dpro response to T0135 Query_name: T0135 Query_length: 108 Prediction: MATRTPKLVKHTLLTRFKDEITREQIDNYINDYTNLLDLIPSMKSFNWGTDLGMESAELN CCCCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHH RGYTHAFESTFESKSGLQEYLDSAALAAFAEGFLPTLSQRLVIDYFLY CCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEEECC 1 2 0 8 0.984 1 3 0 8 0.957 2 3 0 8 0.990 2 4 0 8 0.990 3 4 0 8 0.993 3 5 0 8 0.996 3 6 0 8 0.256 4 5 0 8 0.993 4 6 0 8 0.984 5 6 0 8 0.993 5 7 0 8 0.992 5 8 0 8 0.250 5 9 0 8 0.321 6 7 0 8 0.991 6 8 0 8 0.990 6 9 0 8 0.755 7 8 0 8 0.985 7 9 0 8 0.985 7 10 0 8 0.331 8 9 0 8 0.989 8 10 0 8 0.988 9 10 0 8 0.994 9 11 0 8 0.988 9 17 0 8 0.356 9 69 0 8 0.343 9 105 0 8 0.286 9 106 0 8 0.384 10 11 0 8 0.992 10 12 0 8 0.993 10 15 0 8 0.251 10 16 0 8 0.276 10 104 0 8 0.269 10 105 0 8 0.372 10 106 0 8 0.323 11 12 0 8 0.995 11 13 0 8 0.992 11 14 0 8 0.302 11 103 0 8 0.268 11 104 0 8 0.411 11 105 0 8 0.322 12 13 0 8 0.997 12 14 0 8 0.997 12 15 0 8 0.259 12 67 0 8 0.296 12 102 0 8 0.330 12 103 0 8 0.361 12 104 0 8 0.424 12 105 0 8 0.295 13 14 0 8 0.998 13 15 0 8 0.996 13 65 0 8 0.255 13 66 0 8 0.376 13 67 0 8 0.367 13 101 0 8 0.412 13 102 0 8 0.487 13 103 0 8 0.499 13 104 0 8 0.429 13 105 0 8 0.282 13 106 0 8 0.251 14 15 0 8 0.997 14 16 0 8 0.994 14 65 0 8 0.299 14 66 0 8 0.384 14 67 0 8 0.370 14 101 0 8 0.480 14 102 0 8 0.506 14 103 0 8 0.475 14 104 0 8 0.296 15 16 0 8 0.993 15 17 0 8 0.986 15 66 0 8 0.260 15 101 0 8 0.379 15 102 0 8 0.390 15 103 0 8 0.315 16 17 0 8 0.988 16 18 0 8 0.978 16 101 0 8 0.329 16 102 0 8 0.293 17 18 0 8 0.988 17 19 0 8 0.987 17 20 0 8 0.423 17 21 0 8 0.620 17 63 0 8 0.282 17 100 0 8 0.354 17 101 0 8 0.350 18 19 0 8 0.993 18 20 0 8 0.993 18 21 0 8 0.715 19 20 0 8 0.994 19 21 0 8 0.995 19 22 0 8 0.340 20 21 0 8 0.996 20 22 0 8 0.992 21 22 0 8 0.995 21 23 0 8 0.995 21 24 0 8 0.363 21 25 0 8 0.859 21 26 0 8 0.753 22 23 0 8 0.994 22 24 0 8 0.996 22 25 0 8 0.986 22 26 0 8 0.976 23 24 0 8 0.988 23 25 0 8 0.991 23 26 0 8 0.989 23 27 0 8 0.991 24 25 0 8 0.991 24 26 0 8 0.993 24 27 0 8 0.987 24 28 0 8 0.989 25 26 0 8 0.994 25 27 0 8 0.991 25 28 0 8 0.992 25 29 0 8 0.995 26 27 0 8 0.994 26 28 0 8 0.993 26 29 0 8 0.997 26 30 0 8 0.997 27 28 0 8 0.991 27 29 0 8 0.995 27 30 0 8 0.995 27 31 0 8 0.993 28 29 0 8 0.995 28 30 0 8 0.994 28 31 0 8 0.989 28 32 0 8 0.986 29 30 0 8 0.998 29 31 0 8 0.995 29 32 0 8 0.995 29 33 0 8 0.997 30 31 0 8 0.994 30 32 0 8 0.995 30 33 0 8 0.997 30 34 0 8 0.997 31 32 0 8 0.991 31 33 0 8 0.995 31 34 0 8 0.996 31 35 0 8 0.991 32 33 0 8 0.993 32 34 0 8 0.994 32 35 0 8 0.992 32 36 0 8 0.991 33 34 0 8 0.997 33 35 0 8 0.994 33 36 0 8 0.996 33 37 0 8 0.988 34 35 0 8 0.995 34 36 0 8 0.998 34 37 0 8 0.995 34 38 0 8 0.972 34 39 0 8 0.458 35 36 0 8 0.993 35 37 0 8 0.993 35 38 0 8 0.981 35 39 0 8 0.825 36 37 0 8 0.998 36 38 0 8 0.996 36 39 0 8 0.983 36 40 0 8 0.628 37 38 0 8 0.997 37 39 0 8 0.998 37 40 0 8 0.793 38 39 0 8 0.996 38 40 0 8 0.996 39 40 0 8 0.998 39 41 0 8 0.994 39 42 0 8 0.424 39 43 0 8 0.313 40 41 0 8 0.994 40 42 0 8 0.996 40 43 0 8 0.693 41 42 0 8 0.996 41 43 0 8 0.995 41 44 0 8 0.324 42 43 0 8 0.997 42 44 0 8 0.994 43 44 0 8 0.996 43 45 0 8 0.984 44 45 0 8 0.993 44 46 0 8 0.988 45 46 0 8 0.993 45 47 0 8 0.988 46 47 0 8 0.994 46 48 0 8 0.989 46 49 0 8 0.399 46 52 0 8 0.335 47 48 0 8 0.990 47 49 0 8 0.996 47 50 0 8 0.461 48 49 0 8 0.990 48 50 0 8 0.993 48 51 0 8 0.536 48 52 0 8 0.587 49 50 0 8 0.996 49 51 0 8 0.996 49 52 0 8 0.708 50 51 0 8 0.994 50 52 0 8 0.995 50 53 0 8 0.313 51 52 0 8 0.995 51 53 0 8 0.994 51 54 0 8 0.330 52 53 0 8 0.996 52 54 0 8 0.997 52 55 0 8 0.342 52 56 0 8 0.324 53 54 0 8 0.995 53 55 0 8 0.994 53 56 0 8 0.351 54 55 0 8 0.996 54 56 0 8 0.996 54 57 0 8 0.501 54 58 0 8 0.310 54 59 0 8 0.565 55 56 0 8 0.997 55 57 0 8 0.995 55 58 0 8 0.441 55 59 0 8 0.659 56 57 0 8 0.994 56 58 0 8 0.997 56 59 0 8 0.989 56 60 0 8 0.945 57 58 0 8 0.993 57 59 0 8 0.996 57 60 0 8 0.990 57 61 0 8 0.933 58 59 0 8 0.993 58 60 0 8 0.989 58 61 0 8 0.991 58 62 0 8 0.832 58 63 0 8 0.503 59 60 0 8 0.995 59 61 0 8 0.996 59 62 0 8 0.905 59 63 0 8 0.862 59 64 0 8 0.459 60 61 0 8 0.991 60 62 0 8 0.993 60 63 0 8 0.724 61 62 0 8 0.991 61 63 0 8 0.991 62 63 0 8 0.987 62 64 0 8 0.972 63 64 0 8 0.977 63 65 0 8 0.974 64 65 0 8 0.987 64 66 0 8 0.991 64 104 0 8 0.262 64 105 0 8 0.358 64 106 0 8 0.274 65 66 0 8 0.994 65 67 0 8 0.989 65 103 0 8 0.300 65 104 0 8 0.334 65 105 0 8 0.365 66 67 0 8 0.997 66 68 0 8 0.989 66 102 0 8 0.379 66 103 0 8 0.389 66 104 0 8 0.436 66 105 0 8 0.359 67 68 0 8 0.996 67 69 0 8 0.993 67 101 0 8 0.372 67 102 0 8 0.374 67 103 0 8 0.426 67 104 0 8 0.383 67 105 0 8 0.285 68 69 0 8 0.989 68 70 0 8 0.971 68 101 0 8 0.297 68 102 0 8 0.294 69 70 0 8 0.982 69 71 0 8 0.991 69 72 0 8 0.257 69 100 0 8 0.294 69 101 0 8 0.354 69 102 0 8 0.274 70 71 0 8 0.992 70 72 0 8 0.989 71 72 0 8 0.994 71 73 0 8 0.992 71 74 0 8 0.421 71 75 0 8 0.317 71 76 0 8 0.445 71 77 0 8 0.513 72 73 0 8 0.996 72 74 0 8 0.995 72 75 0 8 0.440 72 76 0 8 0.689 72 77 0 8 0.559 73 74 0 8 0.994 73 75 0 8 0.996 73 76 0 8 0.984 73 77 0 8 0.974 74 75 0 8 0.993 74 76 0 8 0.991 74 77 0 8 0.994 74 78 0 8 0.985 75 76 0 8 0.992 75 77 0 8 0.994 75 78 0 8 0.992 75 79 0 8 0.988 76 77 0 8 0.995 76 78 0 8 0.991 76 79 0 8 0.988 76 80 0 8 0.982 77 78 0 8 0.995 77 79 0 8 0.995 77 80 0 8 0.995 77 81 0 8 0.992 78 79 0 8 0.993 78 80 0 8 0.995 78 81 0 8 0.996 78 82 0 8 0.752 79 80 0 8 0.993 79 81 0 8 0.996 79 82 0 8 0.785 80 81 0 8 0.997 80 82 0 8 0.996 80 83 0 8 0.479 80 84 0 8 0.385 80 85 0 8 0.269 81 82 0 8 0.996 81 83 0 8 0.995 81 84 0 8 0.849 81 85 0 8 0.749 81 86 0 8 0.667 82 83 0 8 0.994 82 84 0 8 0.996 82 85 0 8 0.715 82 86 0 8 0.800 83 84 0 8 0.995 83 85 0 8 0.997 83 86 0 8 0.979 83 87 0 8 0.946 84 85 0 8 0.998 84 86 0 8 0.997 84 87 0 8 0.994 84 88 0 8 0.995 85 86 0 8 0.998 85 87 0 8 0.996 85 88 0 8 0.997 85 89 0 8 0.998 86 87 0 8 0.995 86 88 0 8 0.998 86 89 0 8 0.997 86 90 0 8 0.998 87 88 0 8 0.996 87 89 0 8 0.996 87 90 0 8 0.994 87 91 0 8 0.992 88 89 0 8 0.997 88 90 0 8 0.997 88 91 0 8 0.993 88 92 0 8 0.998 89 90 0 8 0.998 89 91 0 8 0.994 89 92 0 8 0.997 89 93 0 8 0.996 90 91 0 8 0.996 90 92 0 8 0.998 90 93 0 8 0.997 90 94 0 8 0.997 91 92 0 8 0.995 91 93 0 8 0.995 91 94 0 8 0.995 91 95 0 8 0.985 92 93 0 8 0.997 92 94 0 8 0.997 92 95 0 8 0.992 92 96 0 8 0.988 93 94 0 8 0.998 93 95 0 8 0.995 93 96 0 8 0.993 93 97 0 8 0.996 94 95 0 8 0.995 94 96 0 8 0.995 94 97 0 8 0.997 94 98 0 8 0.994 95 96 0 8 0.988 95 97 0 8 0.995 95 98 0 8 0.993 95 99 0 8 0.940 96 97 0 8 0.994 96 98 0 8 0.990 96 99 0 8 0.962 96 100 0 8 0.486 97 98 0 8 0.997 97 99 0 8 0.996 97 100 0 8 0.882 97 101 0 8 0.305 98 99 0 8 0.995 98 100 0 8 0.992 99 100 0 8 0.981 99 101 0 8 0.974 100 101 0 8 0.994 100 102 0 8 0.986 101 102 0 8 0.998 101 103 0 8 0.997 102 103 0 8 0.998 102 104 0 8 0.996 103 104 0 8 0.997 103 105 0 8 0.991 104 105 0 8 0.995 104 106 0 8 0.983 105 106 0 8 0.987 105 107 0 8 0.976 106 107 0 8 0.992 106 108 0 8 0.984 107 108 0 8 0.954 REMARK 6 RANDOM_SEED = 1023990089 REMARK 6 FIRST_SEED = 1023990089 REMARK 6 TRIAL = 1 REMARK 6 OPTIONS = see current file's name REMARK 6 Reconstruction phase = Adaptation_3[500] REMARK 6 Missed Contacts = 150 REMARK 6 Spurious Contacts = 498 REMARK 6 Correct Contacts = 1128 REMARK 6 Total non-self Contacts in reconstructed map = 1626 REMARK 6 Total non-self Contacts in original map = 1278 REMARK 6 Cindex0 = 498 REMARK 6 Cindex1 = 6 REMARK 6 Cindex2 = 14.1975 REMARK 6 Cprecision = 0.693727 REMARK 6 Crecall = 0.882629 REMARK 6 Cf1 = 0.77686 REMARK 6 structure chosen = reconstructed REMARK 6 rms (reconstructed, native) = 0 REMARK 6 rms (mirrored_reconstructed, native) = 0 ATOM 1 CA MET 7.994 -12.065 -30.707 1.00 0.00 ATOM 2 CA ALA 7.244 -12.146 -26.993 1.00 0.00 ATOM 3 CA THR 9.117 -13.557 -24.035 1.00 0.00 ATOM 4 CA ARG 10.323 -10.435 -22.064 1.00 0.00 ATOM 5 CA THR 7.923 -10.550 -19.174 1.00 0.00 ATOM 6 CA PRO 4.536 -12.097 -19.983 1.00 0.00 ATOM 7 CA LYS 6.400 -11.916 -16.729 1.00 0.00 ATOM 8 CA LEU 8.304 -14.698 -15.089 1.00 0.00 ATOM 9 CA VAL 9.897 -17.880 -13.719 1.00 0.00 ATOM 10 CA LYS 6.415 -18.966 -12.875 1.00 0.00 ATOM 11 CA HIS 4.435 -20.928 -10.313 1.00 0.00 ATOM 12 CA THR 8.057 -21.467 -11.049 1.00 0.00 ATOM 13 CA LEU 10.122 -22.423 -7.980 1.00 0.00 ATOM 14 CA LEU 12.838 -21.420 -5.476 1.00 0.00 ATOM 15 CA THR 12.891 -19.874 -1.945 1.00 0.00 ATOM 16 CA ARG 14.001 -17.016 -4.150 1.00 0.00 ATOM 17 CA PHE 16.348 -18.117 -1.318 1.00 0.00 ATOM 18 CA LYS 17.860 -14.553 -1.211 1.00 0.00 ATOM 19 CA ASP 21.328 -13.086 -1.564 1.00 0.00 ATOM 20 CA GLU 22.472 -16.155 -3.328 1.00 0.00 ATOM 21 CA ILE 19.786 -17.983 -5.270 1.00 0.00 ATOM 22 CA THR 22.704 -18.755 -2.952 1.00 0.00 ATOM 23 CA ARG 25.823 -20.917 -2.514 1.00 0.00 ATOM 24 CA GLU 26.180 -22.829 0.769 1.00 0.00 ATOM 25 CA GLN 22.741 -23.444 -0.747 1.00 0.00 ATOM 26 CA ILE 19.699 -23.102 -3.042 1.00 0.00 ATOM 27 CA ASP 22.256 -25.926 -2.828 1.00 0.00 ATOM 28 CA ASN 20.645 -29.382 -3.190 1.00 0.00 ATOM 29 CA TYR 17.131 -29.163 -1.873 1.00 0.00 ATOM 30 CA ILE 15.963 -28.347 1.707 1.00 0.00 ATOM 31 CA ASN 17.492 -25.579 3.758 1.00 0.00 ATOM 32 CA ASP 14.558 -27.086 1.679 1.00 0.00 ATOM 33 CA TYR 14.426 -25.062 -1.520 1.00 0.00 ATOM 34 CA THR 15.165 -25.770 -5.190 1.00 0.00 ATOM 35 CA ASN 18.357 -26.162 -7.042 1.00 0.00 ATOM 36 CA LEU 14.705 -26.669 -6.274 1.00 0.00 ATOM 37 CA LEU 13.229 -30.120 -6.454 1.00 0.00 ATOM 38 CA ASP 16.334 -30.382 -8.616 1.00 0.00 ATOM 39 CA LEU 14.135 -28.939 -11.319 1.00 0.00 ATOM 40 CA ILE 12.711 -25.635 -12.625 1.00 0.00 ATOM 41 CA PRO 15.440 -26.663 -14.964 1.00 0.00 ATOM 42 CA SER 11.703 -26.410 -15.056 1.00 0.00 ATOM 43 CA MET 9.296 -23.607 -15.532 1.00 0.00 ATOM 44 CA LYS 7.282 -26.740 -15.795 1.00 0.00 ATOM 45 CA SER 5.077 -24.176 -14.125 1.00 0.00 ATOM 46 CA PHE 5.377 -25.936 -10.806 1.00 0.00 ATOM 47 CA ASN 3.096 -27.872 -13.183 1.00 0.00 ATOM 48 CA TRP 3.693 -26.295 -9.801 1.00 0.00 ATOM 49 CA GLY 0.439 -28.275 -9.564 1.00 0.00 ATOM 50 CA THR -3.194 -29.062 -10.201 1.00 0.00 ATOM 51 CA ASP -3.464 -26.142 -12.603 1.00 0.00 ATOM 52 CA LEU -0.696 -23.783 -11.445 1.00 0.00 ATOM 53 CA GLY -4.283 -23.780 -10.173 1.00 0.00 ATOM 54 CA MET -0.863 -23.384 -8.581 1.00 0.00 ATOM 55 CA GLU -4.424 -22.084 -8.478 1.00 0.00 ATOM 56 CA SER -3.776 -22.638 -4.792 1.00 0.00 ATOM 57 CA ALA -4.154 -19.506 -2.767 1.00 0.00 ATOM 58 CA GLU -2.344 -22.776 -1.851 1.00 0.00 ATOM 59 CA LEU 1.087 -24.317 -1.571 1.00 0.00 ATOM 60 CA ASN -1.575 -22.443 0.350 1.00 0.00 ATOM 61 CA ARG -0.887 -18.770 0.955 1.00 0.00 ATOM 62 CA GLY 1.757 -17.296 -1.334 1.00 0.00 ATOM 63 CA TYR 4.511 -19.824 -2.248 1.00 0.00 ATOM 64 CA THR 2.768 -21.102 -5.354 1.00 0.00 ATOM 65 CA HIS 4.897 -21.127 -2.222 1.00 0.00 ATOM 66 CA ALA 6.866 -23.551 -4.476 1.00 0.00 ATOM 67 CA PHE 9.118 -26.500 -5.407 1.00 0.00 ATOM 68 CA GLU 10.091 -27.154 -8.982 1.00 0.00 ATOM 69 CA SER 8.768 -30.157 -10.826 1.00 0.00 ATOM 70 CA THR 7.894 -33.352 -12.768 1.00 0.00 ATOM 71 CA PHE 10.885 -34.105 -10.612 1.00 0.00 ATOM 72 CA GLU 9.976 -37.756 -10.745 1.00 0.00 ATOM 73 CA SER 8.737 -41.131 -9.489 1.00 0.00 ATOM 74 CA LYS 10.816 -40.855 -6.369 1.00 0.00 ATOM 75 CA SER 8.407 -38.489 -4.685 1.00 0.00 ATOM 76 CA GLY 6.976 -35.549 -2.862 1.00 0.00 ATOM 77 CA LEU 7.749 -31.830 -2.359 1.00 0.00 ATOM 78 CA GLN 8.060 -35.216 -0.914 1.00 0.00 ATOM 79 CA GLU 10.186 -38.208 0.188 1.00 0.00 ATOM 80 CA TYR 11.774 -35.094 -1.339 1.00 0.00 ATOM 81 CA LEU 14.096 -34.030 1.481 1.00 0.00 ATOM 82 CA ASP 13.139 -34.574 5.115 1.00 0.00 ATOM 83 CA SER 9.358 -34.508 5.222 1.00 0.00 ATOM 84 CA ALA 9.647 -31.698 2.722 1.00 0.00 ATOM 85 CA ALA 5.925 -31.023 2.655 1.00 0.00 ATOM 86 CA LEU 5.584 -27.712 0.929 1.00 0.00 ATOM 87 CA ALA 5.906 -28.708 4.554 1.00 0.00 ATOM 88 CA ALA 8.472 -26.531 2.899 1.00 0.00 ATOM 89 CA PHE 9.790 -24.256 0.119 1.00 0.00 ATOM 90 CA ALA 10.145 -25.644 3.571 1.00 0.00 ATOM 91 CA GLU 11.636 -24.906 7.018 1.00 0.00 ATOM 92 CA GLY 13.615 -22.506 4.802 1.00 0.00 ATOM 93 CA PHE 10.958 -20.425 3.127 1.00 0.00 ATOM 94 CA LEU 7.226 -21.112 3.004 1.00 0.00 ATOM 95 CA PRO 6.583 -18.818 5.965 1.00 0.00 ATOM 96 CA THR 6.641 -15.121 5.142 1.00 0.00 ATOM 97 CA LEU 8.400 -15.889 1.864 1.00 0.00 ATOM 98 CA SER 12.035 -15.070 1.187 1.00 0.00 ATOM 99 CA GLN 12.165 -11.284 1.368 1.00 0.00 ATOM 100 CA ARG 11.569 -13.013 -2.005 1.00 0.00 ATOM 101 CA LEU 8.581 -15.088 -3.075 1.00 0.00 ATOM 102 CA VAL 8.762 -18.660 -4.613 1.00 0.00 ATOM 103 CA ILE 8.198 -17.380 -8.115 1.00 0.00 ATOM 104 CA ASP 11.750 -16.263 -8.800 1.00 0.00 ATOM 105 CA TYR 13.217 -19.425 -10.314 1.00 0.00 ATOM 106 CA PHE 15.820 -22.026 -11.422 1.00 0.00 ATOM 107 CA LEU 17.264 -19.481 -13.831 1.00 0.00 ATOM 108 CA TYR 20.039 -17.735 -15.769 1.00 0.00