From baldig@genome.ICS.UCI.EDU Fri Aug 23 15:42:28 2002 Date: Tue, 06 Aug 2002 09:32:55 -0700 From: Baldis Research Group To: eva_casp@maple.bioc.columbia.edu Subject: CMapPro, CMap23Dpro response to T0170 Query_name: T0170 Query_length: 69 Prediction: QPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALANLSEKKQAF CCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCHHHHHHHH NAYKVQTEK HHHHHHCCC 1 2 0 8 0.976 1 3 0 8 0.994 1 4 0 8 0.355 2 3 0 8 0.986 2 4 0 8 0.991 2 5 0 8 0.355 3 4 0 8 0.992 3 5 0 8 0.996 3 6 0 8 0.348 4 5 0 8 0.996 4 6 0 8 0.993 5 6 0 8 0.992 5 7 0 8 0.975 6 7 0 8 0.966 6 8 0 8 0.976 7 8 0 8 0.996 7 9 0 8 0.983 8 9 0 8 0.992 8 10 0 8 0.992 9 10 0 8 0.987 9 11 0 8 0.982 9 12 0 8 0.374 9 13 0 8 0.307 9 14 0 8 0.323 9 15 0 8 0.335 10 11 0 8 0.993 10 12 0 8 0.995 10 13 0 8 0.570 10 14 0 8 0.764 10 15 0 8 0.573 11 12 0 8 0.994 11 13 0 8 0.994 11 14 0 8 0.988 11 15 0 8 0.987 12 13 0 8 0.992 12 14 0 8 0.992 12 15 0 8 0.996 12 16 0 8 0.990 13 14 0 8 0.992 13 15 0 8 0.995 13 16 0 8 0.992 13 17 0 8 0.992 14 15 0 8 0.995 14 16 0 8 0.991 14 17 0 8 0.993 14 18 0 8 0.996 15 16 0 8 0.995 15 17 0 8 0.996 15 18 0 8 0.997 15 19 0 8 0.998 16 17 0 8 0.992 16 18 0 8 0.996 16 19 0 8 0.995 16 20 0 8 0.993 17 18 0 8 0.995 17 19 0 8 0.995 17 20 0 8 0.994 17 21 0 8 0.991 18 19 0 8 0.998 18 20 0 8 0.995 18 21 0 8 0.994 18 22 0 8 0.997 19 20 0 8 0.994 19 21 0 8 0.994 19 22 0 8 0.997 19 23 0 8 0.997 20 21 0 8 0.994 20 22 0 8 0.996 20 23 0 8 0.995 20 24 0 8 0.985 21 22 0 8 0.994 21 23 0 8 0.996 21 24 0 8 0.992 21 25 0 8 0.965 22 23 0 8 0.998 22 24 0 8 0.997 22 25 0 8 0.993 22 26 0 8 0.989 23 24 0 8 0.996 23 25 0 8 0.996 23 26 0 8 0.996 23 27 0 8 0.950 23 28 0 8 0.738 23 29 0 8 0.323 24 25 0 8 0.993 24 26 0 8 0.995 24 27 0 8 0.955 24 28 0 8 0.678 25 26 0 8 0.994 25 27 0 8 0.995 25 28 0 8 0.598 26 27 0 8 0.995 26 28 0 8 0.996 26 29 0 8 0.340 27 28 0 8 0.994 27 29 0 8 0.993 28 29 0 8 0.990 28 30 0 8 0.992 28 31 0 8 0.263 29 30 0 8 0.994 29 31 0 8 0.994 29 32 0 8 0.361 29 34 0 8 0.293 30 31 0 8 0.994 30 32 0 8 0.994 30 33 0 8 0.348 30 34 0 8 0.345 31 32 0 8 0.995 31 33 0 8 0.995 31 34 0 8 0.490 31 35 0 8 0.280 32 33 0 8 0.995 32 34 0 8 0.997 32 35 0 8 0.625 32 36 0 8 0.699 32 37 0 8 0.415 33 34 0 8 0.994 33 35 0 8 0.996 33 36 0 8 0.989 33 37 0 8 0.981 34 35 0 8 0.992 34 36 0 8 0.994 34 37 0 8 0.994 34 38 0 8 0.994 35 36 0 8 0.991 35 37 0 8 0.995 35 38 0 8 0.993 35 39 0 8 0.994 36 37 0 8 0.994 36 38 0 8 0.994 36 39 0 8 0.993 36 40 0 8 0.993 37 38 0 8 0.998 37 39 0 8 0.995 37 40 0 8 0.996 37 41 0 8 0.996 38 39 0 8 0.996 38 40 0 8 0.998 38 41 0 8 0.997 38 42 0 8 0.995 39 40 0 8 0.996 39 41 0 8 0.996 39 42 0 8 0.991 39 43 0 8 0.958 40 41 0 8 0.998 40 42 0 8 0.997 40 43 0 8 0.992 40 44 0 8 0.872 41 42 0 8 0.998 41 43 0 8 0.996 41 44 0 8 0.926 41 45 0 8 0.458 42 43 0 8 0.996 42 44 0 8 0.997 42 45 0 8 0.480 43 44 0 8 0.993 43 45 0 8 0.990 43 46 0 8 0.303 43 47 0 8 0.266 44 45 0 8 0.993 44 46 0 8 0.996 44 47 0 8 0.576 44 48 0 8 0.746 44 49 0 8 0.431 45 46 0 8 0.994 45 47 0 8 0.996 45 48 0 8 0.964 45 49 0 8 0.969 46 47 0 8 0.994 46 48 0 8 0.992 46 49 0 8 0.994 46 50 0 8 0.993 47 48 0 8 0.993 47 49 0 8 0.997 47 50 0 8 0.996 47 51 0 8 0.976 48 49 0 8 0.995 48 50 0 8 0.995 48 51 0 8 0.991 48 52 0 8 0.959 49 50 0 8 0.998 49 51 0 8 0.994 49 52 0 8 0.994 49 53 0 8 0.989 50 51 0 8 0.995 50 52 0 8 0.996 50 53 0 8 0.992 50 54 0 8 0.809 50 55 0 8 0.257 51 52 0 8 0.995 51 53 0 8 0.997 51 54 0 8 0.911 51 55 0 8 0.797 52 53 0 8 0.996 52 54 0 8 0.996 52 55 0 8 0.990 52 56 0 8 0.975 53 54 0 8 0.996 53 55 0 8 0.996 53 56 0 8 0.996 53 57 0 8 0.996 54 55 0 8 0.992 54 56 0 8 0.990 54 57 0 8 0.990 54 58 0 8 0.992 55 56 0 8 0.993 55 57 0 8 0.992 55 58 0 8 0.992 55 59 0 8 0.995 56 57 0 8 0.990 56 58 0 8 0.990 56 59 0 8 0.995 56 60 0 8 0.991 57 58 0 8 0.992 57 59 0 8 0.995 57 60 0 8 0.994 57 61 0 8 0.979 58 59 0 8 0.995 58 60 0 8 0.993 58 61 0 8 0.994 58 62 0 8 0.991 59 60 0 8 0.998 59 61 0 8 0.995 59 62 0 8 0.994 59 63 0 8 0.995 60 61 0 8 0.995 60 62 0 8 0.995 60 63 0 8 0.996 60 64 0 8 0.995 61 62 0 8 0.991 61 63 0 8 0.996 61 64 0 8 0.989 61 65 0 8 0.987 62 63 0 8 0.994 62 64 0 8 0.991 62 65 0 8 0.987 62 66 0 8 0.987 63 64 0 8 0.995 63 65 0 8 0.994 63 66 0 8 0.991 63 67 0 8 0.963 63 68 0 8 0.305 64 65 0 8 0.991 64 66 0 8 0.988 64 67 0 8 0.991 64 68 0 8 0.883 64 69 0 8 0.346 65 66 0 8 0.990 65 67 0 8 0.989 65 68 0 8 0.856 65 69 0 8 0.347 66 67 0 8 0.993 66 68 0 8 0.989 66 69 0 8 0.427 67 68 0 8 0.989 67 69 0 8 0.985 68 69 0 8 0.994 REMARK 6 RANDOM_SEED = 713949183 REMARK 6 FIRST_SEED = 1028651491 REMARK 6 TRIAL = 3 REMARK 6 OPTIONS = see current file's name REMARK 6 Reconstruction phase = Adaptation_3[500] REMARK 6 Missed Contacts = 13.1711 REMARK 6 Spurious Contacts = 93.177 REMARK 6 Correct Contacts = 432.823 REMARK 6 Total non-self Contacts in reconstructed map = 526 REMARK 6 Total non-self Contacts in original map = 445.994 REMARK 6 Cindex0 = 93.177 REMARK 6 Cindex1 = 1.54128 REMARK 6 Cindex2 = 6.06215 REMARK 6 Cprecision = 0.822857 REMARK 6 Crecall = 0.970468 REMARK 6 Cf1 = 0.890588 REMARK 6 structure chosen = reconstructed REMARK 6 rms (reconstructed, native) = 0 REMARK 6 rms (mirrored_reconstructed, native) = 0 ATOM 1 CA GLN -9.784 -10.987 -2.444 1.00 0.00 ATOM 2 CA PRO -9.063 -14.320 -4.098 1.00 0.00 ATOM 3 CA ALA -12.781 -13.962 -4.077 1.00 0.00 ATOM 4 CA LYS -13.794 -17.016 -6.091 1.00 0.00 ATOM 5 CA LYS -13.019 -19.673 -3.565 1.00 0.00 ATOM 6 CA THR -12.386 -17.635 -0.386 1.00 0.00 ATOM 7 CA TYR -9.310 -19.656 0.243 1.00 0.00 ATOM 8 CA THR -10.584 -23.189 0.998 1.00 0.00 ATOM 9 CA TRP -7.787 -25.154 2.506 1.00 0.00 ATOM 10 CA ASN -7.250 -28.513 4.102 1.00 0.00 ATOM 11 CA THR -10.117 -29.954 6.095 1.00 0.00 ATOM 12 CA LYS -13.696 -29.778 7.337 1.00 0.00 ATOM 13 CA GLU -16.732 -28.208 8.747 1.00 0.00 ATOM 14 CA GLU -14.395 -25.883 10.781 1.00 0.00 ATOM 15 CA ALA -10.791 -26.627 9.955 1.00 0.00 ATOM 16 CA LYS -12.810 -28.114 12.887 1.00 0.00 ATOM 17 CA GLN -9.207 -28.671 13.876 1.00 0.00 ATOM 18 CA ALA -6.416 -25.919 14.247 1.00 0.00 ATOM 19 CA PHE -9.253 -25.288 16.783 1.00 0.00 ATOM 20 CA LYS -11.429 -22.480 15.602 1.00 0.00 ATOM 21 CA GLU -12.359 -19.973 18.349 1.00 0.00 ATOM 22 CA LEU -8.862 -20.775 19.571 1.00 0.00 ATOM 23 CA LEU -6.340 -23.394 20.424 1.00 0.00 ATOM 24 CA LYS -4.491 -20.629 18.535 1.00 0.00 ATOM 25 CA GLU -1.430 -19.422 16.644 1.00 0.00 ATOM 26 CA LYS -4.785 -17.976 17.891 1.00 0.00 ATOM 27 CA ARG -3.961 -15.056 20.081 1.00 0.00 ATOM 28 CA VAL -7.587 -15.114 21.121 1.00 0.00 ATOM 29 CA PRO -4.067 -15.618 22.369 1.00 0.00 ATOM 30 CA SER -1.728 -16.776 25.167 1.00 0.00 ATOM 31 CA ASN -4.523 -15.366 27.261 1.00 0.00 ATOM 32 CA ALA -2.813 -18.203 28.984 1.00 0.00 ATOM 33 CA SER -5.157 -20.735 30.528 1.00 0.00 ATOM 34 CA TRP -5.084 -22.257 27.027 1.00 0.00 ATOM 35 CA GLU -1.965 -23.753 28.406 1.00 0.00 ATOM 36 CA GLN 1.099 -25.288 26.960 1.00 0.00 ATOM 37 CA ALA -2.109 -26.091 25.127 1.00 0.00 ATOM 38 CA MET -5.688 -27.022 25.460 1.00 0.00 ATOM 39 CA LYS -5.546 -27.512 29.232 1.00 0.00 ATOM 40 CA MET -5.667 -29.975 26.304 1.00 0.00 ATOM 41 CA ILE -2.275 -31.643 26.404 1.00 0.00 ATOM 42 CA ILE -4.625 -33.872 24.412 1.00 0.00 ATOM 43 CA ASN -1.470 -34.225 22.329 1.00 0.00 ATOM 44 CA ASP -2.720 -36.929 24.742 1.00 0.00 ATOM 45 CA PRO -3.517 -36.853 28.454 1.00 0.00 ATOM 46 CA ARG -6.419 -37.284 30.933 1.00 0.00 ATOM 47 CA TYR -7.922 -35.650 27.875 1.00 0.00 ATOM 48 CA SER -11.684 -36.000 27.819 1.00 0.00 ATOM 49 CA ALA -10.533 -34.596 24.538 1.00 0.00 ATOM 50 CA LEU -9.459 -38.025 23.389 1.00 0.00 ATOM 51 CA ALA -11.508 -40.634 25.157 1.00 0.00 ATOM 52 CA ASN -14.780 -40.148 26.985 1.00 0.00 ATOM 53 CA LEU -14.430 -39.394 23.329 1.00 0.00 ATOM 54 CA SER -17.668 -38.284 21.604 1.00 0.00 ATOM 55 CA GLU -15.547 -41.473 21.651 1.00 0.00 ATOM 56 CA LYS -15.619 -39.457 18.443 1.00 0.00 ATOM 57 CA LYS -14.020 -40.815 15.263 1.00 0.00 ATOM 58 CA GLN -11.011 -42.759 16.664 1.00 0.00 ATOM 59 CA ALA -11.792 -45.278 19.428 1.00 0.00 ATOM 60 CA PHE -15.345 -46.443 18.616 1.00 0.00 ATOM 61 CA ASN -18.685 -46.486 16.823 1.00 0.00 ATOM 62 CA ALA -16.058 -48.394 14.785 1.00 0.00 ATOM 63 CA TYR -12.620 -50.016 14.721 1.00 0.00 ATOM 64 CA LYS -9.750 -51.620 16.741 1.00 0.00 ATOM 65 CA VAL -10.821 -53.157 20.065 1.00 0.00 ATOM 66 CA GLN -13.828 -54.973 21.330 1.00 0.00 ATOM 67 CA THR -17.241 -54.337 19.915 1.00 0.00 ATOM 68 CA GLU -16.057 -56.968 17.462 1.00 0.00 ATOM 69 CA LYS -19.568 -55.408 17.549 1.00 0.00