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Structures for Molecular Biology

The table lists some of the molecules and complexes that are described in the readings for Molecular Biology courses. Interactive images of these structures can be viewed by following the links indicated under Description. The Reference column is the literature citation (and PubMed link) for the paper that describes each structure.
See Viewing Tips below, for pointers on how to manipulate the linked Chime images.
Description Reference
B-Form DNA helix Drew et al. (1981) Proc. Natl. Acad. Sci. 78 2179.
A-Form RNA helix Dock-Bregeon et al. (1989) J. Mol. Biol. 209 459.
cAMP Receptor Protein (CRP) Schultz et al. (1991) Science 253 1001.
Yeast GAL4 Protein Marmorstein et al. (1992) Nature 356 408.
Human hnRNP A1 Shamoo et al. (1997) Nat. Struct. Biol. 4 33.
snRNP U1A Oubridge et al. (1994) Nature 372 432.
EF-Tu, tRNAPhe, and GTP Nissen et al. (1995) Science 270 1464.
Zif268 zinc finger * Elrod-Erickson et al. (1996) Structure 4 1171.
EcoRI Res. Endonuclease * Kim, Y. et al. (1990) Science 249 1307.
HhaI Res. Methylase * Klimasauskas, S. et al. (1994) Cell 76 357.
Nucleosome * Luger, K. et al. (1997) Nature 389 251.
The above pages are intended to accompany your reading of the descriptions found in the research articles for each structure. They might also serve as a starting point for exploring the models on your own using the RasMol program.

Viewing Tips
The images displayed on the linked pages require the Chemscape Chime plug-in. All of the Mac's and PC's in the CMU computer clusters have this Netscape plug-in installed. To see whether it is installed on your Mac, select "About Plugins..." under the Apple menu.
In addition to simply displaying the molecular structures on a WWW page, the Chime plug-in allows the viewer to manipulate the image with pull-down menu choices, mouse and keyboard actions, and button-clicks. A demonstration of these additional features can be found at the Chime Features page. The Chime Viewer's Guide provides an outline summary of these mouse and keyboard controls.


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* Use the Netscape Go menu to return from these pages.

Return to Prokaryotic Molecular Biology home page.
Return to Eukaryotic Molecular Biology home page.
Back to Molecular Models for Biochemistry at CMU.

The Protein Data Bank ID code is listed at the bottom of each structure page.
The coordinates can be obtained at the 3DB Browser.

Dr. William McClure
wm0p@andrew.cmu.edu.
Department of Biological Sciences
Carnegie Mellon University
Pittsburgh, PA 15213


Last modified 3.8.99.