The RasMol amino colour scheme colours amino acids according to traditional amino acid properties. The purpose of colouring is to identify amino acids in an unusual or surprising environment. The outer parts of a protein that are polar are visible (bright) colours and non-polar residues darker. Most colours are hallowed by tradition. This colour scheme is similar to the shapely scheme (second table) that is available under the RasMol Colours menu. The nucleosides are also colored differently in this scheme, as shown in the third table.
Amino Acids | Color Name | RGB Values | Hexadecimal |
---|---|---|---|
ASP, GLU | bright red | [230,10,10] | E60A0A |
CYS, MET | yellow | [230,230,0] | E6E600 |
LYS, ARG | blue | [20,90,255] | 145AFF |
SER, THR | orange | [250,150,0] | FA9600 |
PHE, TYR | mid blue | [50,50,170] | 3232AA |
ASN, GLN | cyan | [0,220,220] | 00DCDC |
GLY | light grey | [235,235,235] | EBEBEB |
LEU, VAL, ILE | green | [15,130,15] | 0F820F |
ALA | dark grey | [200,200,200] | C8C8C8 |
TRP | pink | [180,90,180] | B45AB4 |
HIS | pale blue | [130,130,210] | 8282D2 |
PRO | flesh | [220,150,130] | DC9682 |
Amino Acids | Color Name | RGB Values | Hexadecimal |
---|---|---|---|
ASP, THR | dark red | [160,0,66] | A00042 |
GLU | red-brown | [102,0,0] | 660000 |
CYS | bright yellow | [55,55,112] | FFFF70 |
MET, TYR | dark yellow | [184,160,66] | B8A042 |
LYS | blue | [71,71,184] | 4747B8 |
ARG | dark blue | [0,0,124] | 00007C |
SER, GLN | orange | [255,76,76] | FF4C4C |
PHE, PRO, TRP | dark grey | [83,76,66] | 534C42 |
ASN | flesh | [255,124,112] | FF7C70 |
GLY, VAL | white | [255,255,255] | FFFFFF |
ILE | dark green | [0,76,0] | 004C00 |
LEU | grey-green | [69,94,69] | 455E45 |
ALA | light green | [140,255,140] | 8CFF8C |
HIS | pale blue | [112,112,255] | 7070FF |
Nucleoside | Color Name | RGB Values | Hexadecimal |
---|---|---|---|
Adenosine | light blue | [160,160,255] | A0A0FF |
Cytosine | orange | [255,140,75] | FF8C4B |
Guanosine | light red | [255,112,112] | FF7070 |
Thymidine | light green | [160,255,160] | A0FFA0 |
Uridine | dark grey | [184,184,184] | B8B8B8 |