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Results for UserSeq

Trusted matches - domains scoring higher than the gathering threshold

DomainStartEndBitsEvalueAlignment
efhand427030.902.9e-05Align
efhand8110715.70 1.1Align


Matches to Pfam-B

DomainStartEndEvalueAlignment
Pfam-B_3211391.2e-15Align


Pfam-B_321 efhand: EF hand efhand: EF hand [108 residues]

efhand 42-70
efhand 81-107

Alignments of Pfam-A domains to HMMs

Format for fetching alignments to seed

Alignment of efhand vs UserSeq/42-70

                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      ++k++F+++D+D++G+I+ eE+k +l+++   
     UserSeq    42    DVKNVFAILDQDRSGFIEEEELKLFLQNF    70
Align to seed

Alignment of efhand vs UserSeq/81-107

                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e k++ +  D DgDGkI +eEf++++  +   
     UserSeq    81    ETKAFLAAGDSDGDGKIGVEEFQSLV--K    107
Align to seed

Alignments of Pfam-B domains to best-matching Pfam-B sequence

Format for fetching alignments to Pfam-B families:

Query UserSeq/1-39 matching Pfam-B_321

     PRVB_XENLA  1 AFGGILSEADISAALQNCQAADSFNFKTFFAQSGLSSKS 39
                   AFGGILSEADISAALQNCQAADSFNFKTFFAQSGLSSKS
        UserSeq  1 AFGGILSEADISAALQNCQAADSFNFKTFFAQSGLSSKS 39

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