Predictions for request T0114_5975
YourSeq   : MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIY : YourSeq  
Q9RCK8    : TINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIY : Q9RCK8  
consv     : 7-------------------------------------------------------------------------------------- : consv

          : 1---------11--------21--------31--------41--------51--------61--------71--------81----- :
OrigSeq   : MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEILSIRIY : OrigSeq

dsc       : ----------EEEEEE-----EEEEEE-----EEEEEEEEEEE----EEEEEE--------EEEEEEEE--------EEEEEEEEE- : dsc
jalign    : -----------EEEE-------EEEEE----EEEEEEEEEEEE----EEEEEE---------EEEEEEE--------EEEEEE---- : jalign
jfreq     : --------------------------------------------------------------------------------------- : jfreq
jhmm      : -----------EEEEE------EEEEE----EEEEEEEEEEE-----EEEEEEE---------EEEEEE--------EEEEEE---- : jhmm
jnet      : -----------EEEE-------EEEEE----EEEEEEEE--E-----EEEEEEE---------EEEE-------------------- : jnet
jpssm     : -----------EEEEE------EEEEE----EEEEEEE---E-----EEEEEEE---------EEEEE---------HHHHH----- : jpssm
mul       : EE---------------------EEE-------EEEE---E------EEEEE---------HHEEEE------------EEEEEEEE : mul
phd       : ------------EEE------EEEEEE-----EEEEEEEEEEE----EEEEEE--------EEEEEEEE-------EEEEEEEEEE- : phd
pred      : ----------EEEEEEE------EEEEE---EEEEEEEEEEE----EEEEEE----------EEEEE--------------EEE--- : pred
zpred     : EEE--------HHHH-------EEEEH----EEEEEEEEEEE------EEEEEE-------HHEEEE-----------EEEEEEEEE : zpred

Jpred     : -----------EEEE-------EEEEE----EEEEEEEEEEE-----EEEEEE----------EEEEE---------EEEEEE---- : Jpred


PHDHtm    : --------------------------------TTTTTTT------------------------------------------------ : PHDHtm
MCoil     : --------------------------------------------------------------------------------------- : MCoil
MCoilDI   : --------------------------------------------------------------------------------------- : MCoilDI
MCoilTRI  : --------------------------------------------------------------------------------------- : MCoilTRI
Lupas 21  : --------------------------------------------------------------------------------------- : Lupas 21
Lupas 14  : --------------------------------------------------------------------------------------- : Lupas 14
Lupas 28  : --------------------------------------------------------------------------------------- : Lupas 28

PHDacc    : -B-U--B---BBB-BU----U-BBBBB-B--BBBBBBBBBBB-B---BBBB-B---B----B-BB-B--UB-UU--UBB-BBBBUB- : PHDacc
Jnet_25   : -B----B---BBB-BB------BBBBB--BBBBBBBBBBBBB----BBBBBBB---B----B--B-B--BB-B---BBBBBBBBBBB : Jnet_25
Jnet_5    : ------------B-B--------BBB-------BBB-BB--B------B-B-B-----------B------------B-----B-B- : Jnet_5
Jnet_0    : --------------------------------------------------------------------------------------- : Jnet_0

PHD Rel   : 968755696551466377652179861468853899976877539817987621258998747876211453284522678987859 : PHD Rel
Pred Rel  : 006999990900690000999978800979088009960868999905097778777000778567955999909008877666000 : Predator Rel
Jnet Rel  : 535888898622442079997245430688522454200001179935654441378898522122112789888740112211013 : Jnet Rel

Your pred :: Your pred


  

Notes


Key:
consv      - Conservation number (+) = 0; (-) = 10
phd        - PHD prediction
dsc        - DSC prediction
pred       - PREDATOR prediction 
nnssp      - NNSSP prediciton 
zpred      - Zpred prediction 
mul        - Mulpred prediction
jnet       - Jnet prediction
jalign     - Jnet alignment prediction
jhmm       - Jnet hmm profile prediction
jpssm      - Jnet PSIBLAST pssm profile prediction
jfreq      - Jnet PSIBLAST frequency profile prediction
Jpred      -  Consensus prediction over all methods

PHDacc     - Solvent Accessibility

PHD Rel    - PHD Reliability
PRED Rel   - Predator Reliability
NNSSP Rel  - NNSSP Reliability
PHDHtm     - PHD transmembrane prediction
MCoil      - MultiCoil prediction (+ Dimer and trimer predictions)
Lupas      - Lupas Coil prediction (21,14,and 28 window sizes)

Note on coiled coil predictions  - = < 50% probability
				 c = >50% <90% probability
				 C = >90% probability