BLASTP2 Result
of 
Bork Group's Advanced BLAST2 Search Service at 
EMBL.
back to BLAST2
BLASTP 2.0MP-WashU [16-Dec-1999] [irix6-r10k-L64 23:35:48 16-Dec-1999]
Copyright (C) 1996-1999 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-1999) http://blast.wustl.edu
Query= query_sequence
(344 letters)
Database: nrdb-95%
701,238 sequences; 229,823,634 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Query sequence and locally-aligned HSPs from database sequences
0 70 140 210 280
| | | | | |344
query_sequence | __________________________________________________
^ v swissnew|Q10644|YD | __________________________________________________
^ v swissnew|P53425|YD | __________________________________________________
^ v sptrembl|Q9KYV2|Q9 | __________________________________________________
^ v sptrembl|Q8FMU2|Q8 | _________________________________________________
^ v sptremblnew|BAC509 | __________________________________________________
^ v sptrembl|Q98NL8|Q9 | _________________________________________________
^ v sptrembl|Q92PJ5|Q9 | ________________________________________________
^ v sptrembl|Q8FWU6|Q8 | _________________________________________________
^ v sptrembl|Q8R934|Q8 | _________________________________________________
^ v sptrembl|Q9A6A7|Q9 | _______________________________________________
^ v sptrembl|Q8NMQ3|Q8 | _________________________________________________
^ v sptrembl|Q8UCD3|Q8 | __________________________________________________
^ v sptrembl|Q8XKH3|Q8 | _____________________________________________
^ v sptrembl|Q9RW87|Q9 | __________________________________________
^ v sptrembl|Q97Y10|Q9 | ______________________________ ____________
^ v sptrembl|Q57326|Q5 | _______________________________________________
^ v sptrembl|Q9I3M6|Q9 | _______________________________________________
^ v sptrembl|Q8XZL2|Q8 | ________________________________________________
^ v sptremblnew|AAN694 | ________________________________________________
^ v sptrembl|Q9V2J0|Q9 | ___________________________ ______________
^ v sptrembl|O57784|O5 | ___________________________ ______________
^ v sptrembl|Q8TZR1|Q8 | ___________________________ ______________
^ v sptrembl|Q8RAV6|Q8 | ________________________________________________
^ v sptrembl|Q8UCH7|Q8 | ______ ___________ ______________
^ v sptrembl|Q8YBZ5|Q8 | ____________________________ ________________
^ v sptrembl|Q8CVA7|Q8 | ____________________________ ________
^ v sptrembl|Q930Z6|Q9 | ____________________________ _____________
^ v sptrembl|Q98IB6|Q9 | ______________________________ ______________
^ v tremblnew|AF543480 | ________
^ v sptrembl|Q98JC5|Q9 | _____________________________
^ v sptrembl|Q9L0P1|Q9 | ______________________________________________
^ v sptrembl|Q987V4|Q9 | ____________________________________________
^ v pdb|1B65|1B65-A | ________________________________________________
^ v sptrembl|Q9X6K5|Q9 | __________________
^ v sptrembl|Q8VHG2|Q8 | ________________________________
^ v sptrembl|Q8UK81|Q8 | ___________________________ _______________
^ v sptrembl|O50430|O5 | ____________
^ v sptrembl|Q8XRM8|Q8 | _______________________________________________
^ v sptrembl|O13028|O1 | ______________________________
^ v trembl|K03506|BTEL | _________________________________________________
^ v swissnew|P04985|EL | _________________________________________________
^ v swissnew|O06250|YY | _____________________________________
^ v sptrembl|Q28099|Q2 | _________________________________________________
^ v sptremblnew|AAO354 | __ _______
^ v sptrembl|Q94HY7|Q9 | __________________
^ v sptrembl|Q9L547|Q9 | ______________________________
^ v sptrembl|O15336|O1 | _________________________________________________
^ v sptrembl|Q9LAX0|Q9 | ______________________________________________
^ v sptrembl|Q8N2G0|Q8 | ______________________________________________
^ v trembl|U00020|ML02 | ____________________________________
^ v sptrembl|Q01916|Q0 | ________________________
^ v sptrembl|Q9GUB4|Q9 | _____________________________________________
^ v swissnew|P37391|YY | __________________________________________
^ v swissnew|P15502|EL | _________________________________________________
^ v sptrembl|Q8DS95|Q8 | ______
^ v sptrembl|Q28098|Q2 | __________________________________________________
^ v sptrembl|Q01914|Q0 | ____________________________
^ v sptrembl|Q9S209|Q9 | _________________________________
^ v sptrembl|Q8DHN4|Q8 | _________________
^ v sptrembl|Q14234|Q1 | _________________________________________________
^ v sptrembl|Q8G9V7|Q8 | _______
^ v swiss|P54320|ELS_M | _____________________________________
^ v sptrembl|Q98JW2|Q9 | _________
^ v sptrembl|Q9HQP1|Q9 | ______________________________________
^ v sptrembl|Q8G9V6|Q8 | _______
^ v sptrembl|Q8PGR8|Q8 | _________________________
^ v sptrembl|Q93N87|Q9 | ___________________ _________________
^ v swissnew|P02834|HM | __________________
^ v sptrembl|Q8VC49|Q8 | ____________________________
^ v sptrembl|Q9WX72|Q9 | ____________________________
^ v sptrembl|O33312|O3 | _________________________________
^ v sptrembl|Q9BIU2|Q9 | ______________________________
^ v pironly|JQ0138|JQ0 | _____________
^ v sptrembl|Q9KYH3|Q9 | _______
^ v sptrembl|Q8DE18|Q8 | _________
^ v sptrembl|O18504|O1 | _____________________________________
^ v sptrembl|Q8K6B1|Q8 | ___________________________
^ v sptrembl|Q8UDK8|Q8 | ___________________________
^ v sptrembl|Q98BA1|Q9 | __________
^ v sptrembl|Q8NBI4|Q8 | __________________________________________________
^ v sptrembl|Q9NI17|Q9 | ___________
^ v sptrembl|Q8VKM5|Q8 | _____________________________
^ v sptrembl|Q23057|Q2 | _____________________________________
^ v swiss|P40119|CBYC_ | ______________
^ v sptrembl|Q9ZB96|Q9 | ______________________
^ v sptrembl|Q9HPL2|Q9 | ________________________________________
^ v sptrembl|Q93JH7|Q9 | ___________________________________
^ v sptrembl|Q9NI07|Q9 | _________
^ v sptrembl|Q99013|Q9 | ______
^ v tremblnew|AE003714 | _________________
^ v sptrembl|Q8KRX8|Q8 | ____________________________________
^ v sptrembl|Q9KYF3|Q9 | __________________
^ v sptrembl|Q93H16|Q9 | __________
^ v sptrembl|Q9YC39|Q9 | _______
^ v sptrembl|Q9I3Y4|Q9 | ____________________
^ v sptrembl|Q8N160|Q8 | ________
^ v sptrembl|Q14235|Q1 | _________________________________________________
^ v sptrembl|Q9A9F1|Q9 | _______
^ v sptrembl|Q9V7P0|Q9 | _____________________
^ v sptrembl|Q9PEK3|Q9 | _________
Alignments:
^ = swissnew|Q10644|YD33_MYCTU Hypothetical protein
Rv1333.//:swiss|Q10644|YD33_MYCTU Hypothetical protein
Rv1333.//:trembl|AE007011|AE007011_3 gene: "MT1375"; product:
"conserved hypothetical protein"; Mycobacterium tuberculosis
CDC1551, section 97 of 280 of the complete genome.
//:trembl|Z73902|MTCY130_18 gene: "Rv1333"; product: "hypothetical
protein Rv1333"; Mycobacterium tuberculosis H37Rv complete genome;
segment 59/162 //:pironly|A70771|A70771 probable hydrolase -
Mycobacterium tuberculosis (strain H37RV)//:gp|Z73902|1340099
hypothetical protein Rv1333 [Mycobacterium tuberculosis
H37Rv]//:gp|AE007011|13880983 conserved hypothetical protein
[Mycobacterium tuberculosis CDC1551]
Length = 344
0 70 140 210 280
| | | | | |344
swissnew|Q10644|YD33_ | __________________________________________________
Local hits (HSPs) | __________________________________________________
Score = 1768 (627.4 bits), Expect = 6.2e-182, P = 6.2e-182
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL
Sbjct: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG
Sbjct: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
Query: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV
Sbjct: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
Query: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC
Sbjct: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET
Sbjct: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS
Sbjct: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
^ = swissnew|P53425|YD33_MYCLE Hypothetical protein
ML1167.//:swiss|P53425|YD33_MYCLE Hypothetical protein
ML1167.//:trembl|U00014|ML014_11 product: "B1549_C2_208";
Mycobacterium leprae cosmid B1549. //:trembl|AL583921|MLEPRTN5_15
gene: "ML1167"; product: "possible hydrolase"; Mycobacterium
leprae strain TN complete genome; segment 5/10
//:pironly|S72794|S72794 hypothetical protein B1549_C2_208 -
Mycobacterium leprae//:gp|U00014|466914 B1549_C2_208 [Mycobacterium
leprae]//:gp|AL583921|13093140 possible hydrolase [Mycobacterium
leprae]
Length = 362
0 80 160 240 320
| | | | | |362
swissnew|P53425|YD33_ | __________________________________________________
Local hits (HSPs) | ________________________________________________
Score = 1337 (475.7 bits), Expect = 2.9e-136, P = 2.9e-136
Identities = 270/352 (76%), Positives = 289/352 (82%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MNSITD+ GI+VGHY RLDPDASLGAGWACGVTVVL PPGTVGAVDCRGG PGTRETDLL
Sbjct: 8 MNSITDISGIQVGHYHRLDPDASLGAGWACGVTVVLTPPGTVGAVDCRGGVPGTRETDLL 67
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPANSVRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGV M GVVPIVPGAVIFDL VG
Sbjct: 68 DPANSVRFVDAVLLAGGSAYGLAAADGVMRWLEEHERGVVMLGGVVPIVPGAVIFDLSVG 127
Query: 121 GWNCRPTADFGYSACAAA------GVD--VAVGTVGVGVGARAGALKGGVGTASATLQSG 172
++CRPTA+FGY AC AA G D VAVGTVG GVGARAG LKGGVGTAS TL+SG
Sbjct: 128 DFHCRPTAEFGYLACQAAYDAAVGGQDATVAVGTVGAGVGARAGVLKGGVGTASITLESG 187
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
TVG + VVN+ G+VVD ATGLPWM DL+ EFALR P EQIA AQL SPL A NT
Sbjct: 188 PTVGAVVVVNSVGDVVDRATGLPWMTDLIDEFALRPPSPEQIAGFAQLKSPLSALNT--- 244
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TIGV+A DA LSPAAC+R+A+AA DGLARTIRPAHT LDGDTVFALATGAV A V
Sbjct: 245 -TIGVVATDATLSPAACQRVAMAAQDGLARTIRPAHTALDGDTVFALATGAVEATATADV 303
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
P A+SPET L+T VGAAA DCLARAVL VL A+ VAGIPTY MFPGAFG+
Sbjct: 304 PVAMSPETGLITEVGAAADDCLARAVLVAVLAAESVAGIPTYCGMFPGAFGT 355
^ = sptrembl|Q9KYV2|Q9KYV2 Hypothetical protein
SCO3193.//:tremblnew|AL939115|SCO939115_140 gene: "SCO3193";
"SCE22.10"; product: "conserved hypothetical protein SCE22.10";
Streptomyces coelicolor A3(2) complete genome; segment 12/29
//:trembl|AL939115|SCO939115_140 gene: "SCO3193"; "SCE22.10";
product: "conserved hypothetical protein SCE22.10"; Streptomyces
coelicolor A3(2) complete genome; segment 12/29
//:gp|AL939115|7799513 conserved hypothetical protein SCE22.10
[Streptomyces coelicolor A3(2)]//:gpnew|AL939115|7799513 conserved
hypothetical protein SCE22.10 [Streptomyces coelicolor A3(2)]
Length = 348
0 70 140 210 280
| | | | | |348
sptrembl|Q9KYV2|Q9KYV | __________________________________________________
Local hits (HSPs) | __________________________________________________
Score = 702 (252.2 bits), Expect = 5.7e-69, P = 5.7e-69
Identities = 173/359 (48%), Positives = 213/359 (59%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDL 59
++++TDV G+ VGH R G GW G TVVL P G V VD RGG PGT+ETD
Sbjct: 3 VDALTDVAGLLVGHATRT------GDGWLTGTTVVLAPEGGAVAGVDVRGGGPGTKETDA 56
Query: 60 LDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFD 116
LDP N V+ V A++L GGSAYGL AA GVM WLEE RGV + + VVP+VP A +FD
Sbjct: 57 LDPRNLVQKVQAVVLTGGSAYGLDAASGVMAWLEERGRGVRVGPDPAHVVPVVPAACVFD 116
Query: 117 LPVGG-WNCRPTADFGYSACAAA-----GVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
L GG + RP A GY+A AAA G VA G VG G GA GALKGGVGTAS L
Sbjct: 117 LGRGGDFRARPDAVTGYAAVAAAHASAPGAAVAEGCVGAGTGAVVGALKGGVGTASTVLD 176
Query: 171 SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP 230
SG+TV L V NAAG+V DP TG+ + +L + P E A + + + A N P
Sbjct: 177 SGITVAALVVANAAGSVTDPETGVLY-GELFRGGRVEYPAPEVHEAAGRRLAEVAARNAP 235
Query: 231 --FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
NTT+ V+A DA LS A +++A AHDG+AR +RP H DGDTVFALATG P
Sbjct: 236 PPLNTTLAVVATDAGLSKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFALATGVR--PL 293
Query: 289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI----PTYRDMFPGAFG 343
+AG P AL+ V AA AD + RA++ V A+PV G P+Y ++ G G
Sbjct: 294 DAGQPLALNE-------VLAAGADVVTRAIVRAVRAAEPVDGPGGAWPSYGGLYGGPDG 345
^ = sptrembl|Q8FMU2|Q8FMU2 Conserved hypothetical
protein.//:tremblnew|AP005222|AP005222_98 product: "conserved
hypothetical protein"; Corynebacterium efficiens YS-314 DNA,
complete genome, section 9/11. //:trembl|AP005222|AP005222_98
product: "conserved hypothetical protein"; Corynebacterium
efficiens YS-314 DNA, complete genome, section 9/11.
//:gp|AP005222|23494250 conserved hypothetical protein
[Corynebacterium efficiens YS-314]
Length = 317
0 70 140 210 280
| | | | | |317
sptrembl|Q8FMU2|Q8FMU | __________________________________________________
Local hits (HSPs) | _________________________________________________
Score = 598 (215.6 bits), Expect = 6.0e-58, P = 6.0e-58
Identities = 158/345 (45%), Positives = 201/345 (58%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV GI +GH D GVTVV+ P G VD RGG PGTRETDLL+P
Sbjct: 8 LCDVPGIHLGHVTSGDT----------GVTVVVAPGGAFAGVDVRGGGPGTRETDLLEPH 57
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAM---DS-G-VVPIVPGAVIFDLP 118
N+V+ V A+ L GGSAYGLAAADGVM LEE G + D G +VPIVP AVIFDL
Sbjct: 58 NTVQQVHAVALCGGSAYGLAAADGVMYALEERGIGFPVLGPDRPGPIVPIVPAAVIFDLL 117
Query: 119 VGGWNCRPTADFGYSAC--AAAGVDVAV-GTVGVGVGARAGALKGGVGTASATL-QSGVT 174
VG RPT + G +A A AG V G++G G GA AG L+GG G AS T+ + V
Sbjct: 118 VGDPTNRPTREHGLTAVDHALAGRQREVSGSIGAGTGATAGHLRGGFGQASTTVGEFVVA 177
Query: 175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
G++A N G VVDP TG + A G PA + LA + P NTT
Sbjct: 178 AGIVA--NPVGEVVDPTTGTLYGAP--GR------PAVDVDKLAAVPHPAA----DLNTT 223
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IGVIA +A ++ A +R+A+ HDGLAR +RP+H+P+DGDT+FAL+TG GV A
Sbjct: 224 IGVIATNAPVTKAQAKRLALTGHDGLARAVRPSHSPMDGDTLFALSTG-----DGTGVDA 278
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
L + ++ AAAADC+ A++ V +A P G+ TYR++ P
Sbjct: 279 TL------LASLCAAAADCVQNAIVDAVTSASPGHGLTTYRELIP 317
^ = sptremblnew|BAC50943|BAC50943 Blr5678
protein.//:tremblnew|AP005955|AP005955_221 gene: "blr5678";
Bradyrhizobium japonicum DNA, complete genome, strain: USDA110,
section 21/31. //:gp|AP005955|27353954 blr5678 [Bradyrhizobium
japonicum]
Length = 332
0 70 140 210 280
| | | | | |332
sptremblnew|BAC50943| | __________________________________________________
Local hits (HSPs) | __________________________________________________
Score = 588 (212.0 bits), Expect = 6.9e-57, P = 6.9e-57
Identities = 144/351 (41%), Positives = 191/351 (54%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ G+RVGH + DA + A G T ++ V A+D RGG PGTRE LLD
Sbjct: 3 NLLTDIAGVRVGHAE----DAKV----ASGTTAIIFDSPAVAAIDVRGGGPGTREDALLD 54
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
AN+V VDA+ L+GGSA+GL GV WL E RG + ++PIVPGA++FDL GG
Sbjct: 55 LANTVERVDAIALSGGSAFGLDTGGGVQAWLAEQGRGHRVREALIPIVPGAILFDLLNGG 114
Query: 122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
W P D GY+A AAAG D A+G+VG G+GA KGG+G+ASA GV V
Sbjct: 115 DKAWGRFSPYRDLGYAAAAAAGTDFAIGSVGAGLGATTATFKGGLGSASAVTPDGVKVAA 174
Query: 178 LAVVNAAGNVVDPATGLPWM----ADLVGEFALRAPPAEQIAALAQLSSPLG-AFNTPFN 232
+ VNA G+V G PW ++ GE+ R P + + ++ G A + N
Sbjct: 175 IVAVNAVGSVT-VGNG-PWFWAAPFEVDGEYGGRGLPDKFTDDMLRMRIKGGPAASAREN 232
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIG + DA L+ +R+A+ AH G AR I P H P DGD ++A AT + P G+
Sbjct: 233 TTIGAVVTDAVLTKPQAKRLAMIAHTGFARAIYPVHAPTDGDVLYAAATCEKPIEPLVGL 292
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVL--NAQPVAGI-PTYRDMFPG 340
T +G AA+ +ARA+ GV A P G P +RD F G
Sbjct: 293 -----------TELGTVAANVVARAIARGVYCATALPFGGAQPAWRDRFGG 332
^ = sptrembl|Q98NL8|Q98NL8 Hypothetical protein
mll0085.//:trembl|AP002994|AP002994_62 gene: "mll0085";
Mesorhizobium loti DNA, complete genome, section 1/21.
//:gp|AP002994|14021130 hypothetical protein [Mesorhizobium loti]
Length = 341
0 70 140 210 280
| | | | | |341
sptrembl|Q98NL8|Q98NL | __________________________________________________
Local hits (HSPs) | ________________________________________________
Score = 582 (209.9 bits), Expect = 3.0e-56, P = 3.0e-56
Identities = 159/352 (45%), Positives = 193/352 (54%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+RVG+ DA L +G VT +L V V GGAPGTRETDLL+
Sbjct: 8 NLITDVAGLRVGN----SSDARLKSG----VTTILCDEPAVAGVQILGGAPGTRETDLLE 59
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
P NS+ + A++L+GGSA+GL AA GV L E RGV + G VPIVP A++FDL
Sbjct: 60 PHNSIEAIHAVVLSGGSAFGLDAASGVQAALRE--RGVGFEVGGFRVPIVPAAILFDLRN 117
Query: 120 GG---WNCRPT-ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV 175
GG W P D GY A +A D +GTVG G GA LKGG+G+AS L +GVT+
Sbjct: 118 GGDKDWGRYPPYRDLGYEAAQSAATDFQLGTVGAGTGALTAGLKGGLGSASTLLDTGVTI 177
Query: 176 GVLAVVNAAGNVVDPATGLPWMADL-VG-EFA-LRAP---PAEQIAALAQLSSPLGA--F 227
G LA VN G+V T W A +G EF L P PA+ L +
Sbjct: 178 GALAAVNPTGSVTVGRTRHLWAAPFEIGDEFGGLGYPSPMPADAKEILLKYRDKHAGKQM 237
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
T NTTI VIA DA L+ AA +R+A++AHDG R I P HTP DGD VFALATG +
Sbjct: 238 ETGGNTTIAVIATDAVLTKAAAKRLAMSAHDGFVRAIWPTHTPADGDLVFALATGTSGIR 297
Query: 288 PEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
EA AA+ L A GA +ARA+ GV A P D+FP
Sbjct: 298 LEAD--AAID----LYAAAGAT----MARAIGRGVF-----AATPADNDLFP 334
^ = sptrembl|Q92PJ5|Q92PJ5 Hypothetical protein
R01755.//:trembl|AL591788|SME591788_110 gene: "SMc00512"; product:
"CONSERVED HYPOTHETICAL PROTEIN"; Sinorhizobium meliloti 1021
complete chromosome; segment 7/12 //:gp|AL591788|15074689 CONSERVED
HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 334
0 70 140 210 280
| | | | | |334
sptrembl|Q92PJ5|Q92PJ | __________________________________________________
Local hits (HSPs) | _______________________________________________
Score = 571 (206.1 bits), Expect = 4.4e-55, P = 4.4e-55
Identities = 149/333 (44%), Positives = 186/333 (55%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+ VG+ + D L +G VT VL P AV GGAPGTRETDLL
Sbjct: 7 NLITDVPGLLVGNAE----DIRLKSG----VTAVLCDPPATAAVQVLGGAPGTRETDLLA 58
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N+V+ VDA++L+GGSA+GL AA GV L E RG A+ VPIVP A++FDL GG
Sbjct: 59 PHNTVQAVDAIVLSGGSAFGLDAASGVQAALREMGRGFAVGPHRVPIVPAAILFDLANGG 118
Query: 122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
W P D GY A A D G+ G G GA KGG+G+AS L +G+TVG
Sbjct: 119 DKDWGRYAPYRDLGYQAARAVSADFGTGSTGAGTGALTATFKGGLGSASTVLSNGITVGA 178
Query: 178 LAVVNAAGNVVDPATGLPWMA--DLVGEFA-LRAP-PAEQIAALAQLSSPLGAFNTPFNT 233
L VNA G+ T W A ++ EF L P P Q AA + + NT
Sbjct: 179 LVAVNAIGSATVGDTRHFWAAPFEMDDEFGGLGQPTPWPQDAAAPRFKFRERQASAT-NT 237
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVP 293
TI VIA DA L+ A +R+AIAAHDG +R + P+HTPLDGD VFAL+TG
Sbjct: 238 TIAVIATDALLTKAEAKRLAIAAHDGFSRALWPSHTPLDGDLVFALSTGT---------- 287
Query: 294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQ 326
+ +P Q + AAAA +ARA+ GV +A+
Sbjct: 288 SGKAPLLQDFIDLSAAAAATMARAIARGVYDAR 320
^ = sptrembl|Q8FWU6|Q8FWU6 Conserved hypothetical
protein.//:trembl|AE014534|AE014534_9 gene: "BRA0349"; product:
"conserved hypothetical protein"; Brucella suis 1330 chromosome II
section 30 of 108 of the complete genome. //:gp|AE014534|23463695
conserved hypothetical protein [Brucella suis 1330]
Length = 368
0 80 160 240 320
| | | | | |368
sptrembl|Q8FWU6|Q8FWU | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 554 (200.1 bits), Expect = 2.8e-53, P = 2.8e-53
Identities = 149/347 (42%), Positives = 190/347 (54%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
SITDV GI++GH+ G +V+L G VD RG APGTRETDLLDP
Sbjct: 41 SITDVPGIKLGHHTLTRRPT--------GCSVLLCEEGATAGVDVRGSAPGTRETDLLDP 92
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
N V+ V A+LL+GGSAYGLAAA GVMR+LEE+ G + GVVPIVP A++ DL VG +
Sbjct: 93 INFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGDF 152
Query: 123 NCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQ-SGV 173
+ RP + GY AC AA G +G G GA G A+KGG+GTAS + + +
Sbjct: 153 SVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYAMKGGLGTASYKVPGTEI 212
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIA-ALAQLSSPLGAFNTP-F 231
VG + VNA G+V P + L G R + +A + G +
Sbjct: 213 VVGAIVAVNAVGDVRAPNSH----RILAGA---RTEDGKGFRNTMAAIMQGHGVVKSGGA 265
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
NTTIG IA +A A ++IA AHDG ARTI P HT DGDT+FAL+TG A +A
Sbjct: 266 NTTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFALSTGK-AKDGQAD 324
Query: 292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRD 336
V TA+GA AA +A AV V+ A+ P +P +RD
Sbjct: 325 V-----------TAIGAIAASVMADAVARAVVQAESLPHLNLPAHRD 360
^ = sptrembl|Q8R934|Q8R934
L-aminopeptidase/D-esterase.//:trembl|AE013132|AE013132_6 gene:
"DmpA2"; product: "L-aminopeptidase/D-esterase";
Thermoanaerobacter tengcongensis strain MB4T, section 159 of 244 of
the complete genome. //:gp|AE013132|20516808
L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
Length = 324
0 70 140 210 280
| | | | | |324
sptrembl|Q8R934|Q8R93 | __________________________________________________
Local hits (HSPs) | ________________________________________________
Score = 538 (194.4 bits), Expect = 1.4e-51, P = 1.4e-51
Identities = 139/345 (40%), Positives = 190/345 (55%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
I ++ GI+VG+ + ++ AG C TVV+ G VD RGGAPGTRETDL+
Sbjct: 8 IKEIEGIKVGNAENVE------AGTGC--TVVICEEGATPGVDVRGGAPGTRETDLIRSE 59
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVGG 121
N V + A++LAGGSA+GL AA GVMR+LEE +G+ D+GV +PIV A++FDL VG
Sbjct: 60 NLVEKIHAVVLAGGSAFGLDAASGVMRYLEE--KGIGFDTGVLKIPIVASAILFDLAVGN 117
Query: 122 WNCRPTADFGYSACAAAGV-DVAVGTVGVGVGARAG-------ALKGGVGTASATLQSG- 172
RP + GY AC A + G G G GA G A+K G+G + LQ+G
Sbjct: 118 PYIRPDFEMGYKACVNAEKGEFTYGNKGAGTGASVGKFLGIKRAMKSGLGCYA--LQAGE 175
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
+ VG + VNA G+V DP TG +A L+ E + E+ A + + F N
Sbjct: 176 LKVGAVVAVNALGDVFDPETG-EVIAGLLDEKGEKIISTEE-AIIENIGREKSVFRN--N 231
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIGV+ +A LS A ++A AHDG AR I+P HT DGDT+F +ATG V V P
Sbjct: 232 TTIGVVITNAMLSKAEANKVASMAHDGYARAIKPVHTMFDGDTIFVMATGKVKVDP---- 287
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
T+VG A + RA++ V A+ G+ +Y+D+
Sbjct: 288 -----------TSVGVLAVKAVERAIVRAVKEAESAYGLKSYKDL 321
^ = sptrembl|Q9A6A7|Q9A6A7 Hypothetical protein
CC2187.//:trembl|AE005891|AE005891_1 gene: "CC2187"; product:
"conserved hypothetical protein"; Caulobacter crescentus CB15
section 217 of 359 of the complete genome. //:pironly|B87520|B87520
conserved hypothetical protein CC2187 [imported] - Caulobacter
crescentus//:gp|AE005891|13423688 conserved hypothetical protein
[Caulobacter crescentus CB15]
Length = 330
0 70 140 210 280
| | | | | |330
sptrembl|Q9A6A7|Q9A6A | __________________________________________________
Local hits (HSPs) | ________________________________________________
Score = 530 (191.6 bits), Expect = 9.6e-51, P = 9.6e-51
Identities = 142/333 (42%), Positives = 176/333 (52%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G++VG + D ++ G VTVVL P AVD RGG P RETD L
Sbjct: 8 NLITDVPGLKVGCVE----DEAVRTG----VTVVLCPEAWTAAVDVRGGGPAVRETDTLR 59
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
P NS A+ +GGS +GL AADGV L G+ + +G +PIVP A + DL
Sbjct: 60 PENSFSKAHAICFSGGSVFGLGAADGVASALSNRDVGLRITAGTPAIPIVPAACLHDLSN 119
Query: 120 GG---WNCRPT-ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV 175
GG W P G A AAG D +G VG G GA AG GG+G+AS L G+ V
Sbjct: 120 GGDKAWGLTPPYRALGMKAVEAAGEDFPLGPVGAGRGAMAGLRPGGLGSASLDLGDGLIV 179
Query: 176 GVLAVVNAAGN--VVDPATGLPWMADLVGEFALRAPP--AEQIAALAQLSSPLGA-FNTP 230
L N G+ + D T W ++ GEF R P A I L S LGA
Sbjct: 180 AALVAANPVGSAYMADGETFWAWPFEIDGEFGGRRPGTMAPAIEPLPD-DSKLGARLAAG 238
Query: 231 FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA 290
NTT+ ++A A LS A +R+A+ AHDG+AR +RP HTP DGD VFALA+GA
Sbjct: 239 ANTTLALVATTADLSTAEAQRMAMMAHDGMARAVRPCHTPFDGDVVFALASGAK------ 292
Query: 291 GVPAALSP-ETQLVTAVGAAAADCLARAVLAGV 322
P P + L T +G+AAADCLARA+ V
Sbjct: 293 --PLGEDPMRSVLRTRIGSAAADCLARAMARAV 323
^ = sptrembl|Q8NMQ3|Q8NMQ3
L-aminopeptidase/D-esterase.//:trembl|AP005281|AP005281_309 gene:
"Cgl2513"; product: "L-aminopeptidase/D-esterase"; Corynebacterium
glutamicum ATCC 13032 DNA, complete genome, section 8/10.
//:gp|AP005281|21325284 L-aminopeptidase/D-esterase
[Corynebacterium glutamicum ATCC 13032]
Length = 320
0 70 140 210 280
| | | | | |320
sptrembl|Q8NMQ3|Q8NMQ | __________________________________________________
Local hits (HSPs) | _______________________________________________
Score = 512 (185.3 bits), Expect = 7.8e-49, P = 7.8e-49
Identities = 130/283 (45%), Positives = 162/283 (57%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV G +GH + D G +VV+ P G VD RGG PGTRETDLL+P
Sbjct: 18 LIDVAGFLLGHVTKGDT----------GCSVVIAPNGAFAGVDVRGGGPGTRETDLLEPH 67
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRG--VAMDSGVVPIVPGAVIFDLPVGG 121
NSV+ A++L GGSA+GLAAADGVM LE G V + +VPIVPGAVIFDL VG
Sbjct: 68 NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 127
Query: 122 WNCRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
RPTA G A A AG G+VG G GA AG L+GG G +S + T+
Sbjct: 128 PKNRPTAADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRVGK-YTIAAGV 186
Query: 180 VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIA 239
V N G VVD TG AL P + +L S A T NTTIGV+A
Sbjct: 187 VANPVGEVVDLTTG-----------ALFGRPEVMGVGVDKLKS---AAET-LNTTIGVVA 231
Query: 240 CDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG 282
DA ++ A +R+A+ AHDGLAR +RP+H+P+DGDT FA+++G
Sbjct: 232 TDAPVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAMSSG 274
Score = 224 (83.9 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 67/203 (33%), Positives = 103/203 (50%)
Query: 137 AAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPW 196
AA + AV G +G++ G G + L+ G V A +
Sbjct: 134 AADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRVGKYTIAAGVVANPVGE 193
Query: 197 MADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAA 256
+ DL AL P + +L S A T NTTIGV+A DA ++ A +R+A+ A
Sbjct: 194 VVDLTTG-ALFGRPEVMGVGVDKLKS---AAET-LNTTIGVVATDAPVTKAQAKRLALVA 248
Query: 257 HDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLAR 316
HDGLAR +RP+H+P+DGDT FA+++G +GV +P +L + A AADC+
Sbjct: 249 HDGLARAVRPSHSPMDGDTFFAMSSG-----DGSGV----TP-VELAE-LSAHAADCVQD 297
Query: 317 AVLAGVLNAQPVAGIPTYRDMFP 339
A++ +L A P G+ ++R++ P
Sbjct: 298 AIIDAILTASPGLGLKSFRELLP 320
^ = sptrembl|Q8UCD3|Q8UCD3 Hypothetical protein
Atu2565.//:trembl|AE008169|AE008169_5 gene: "AGR_C_4649"; product:
"AGR_C_4649p"; Agrobacterium tumefaciens str. C58 circular
chromosome, section 227 of 254 of the complete sequence.
//:pironly|H97666|H97666 hypothetical 33.9K protein rv1333
[imported] - Agrobacterium tumefaciens
(strain//:gp|AE008169|15157757 AGR_C_4649p [Agrobacterium
tumefaciens str. C58 (Cereon)]
Length = 355
0 80 160 240 320
| | | | | |355
sptrembl|Q8UCD3|Q8UCD | __________________________________________________
Local hits (HSPs) | ______________________________________________
Score = 508 (183.9 bits), Expect = 2.1e-48, P = 2.1e-48
Identities = 146/351 (41%), Positives = 183/351 (52%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ GI VG+ D SLG+G VT ++ V + GGAPG R+T LLD
Sbjct: 27 NLLTDIDGILVGNVT----DLSLGSG----VTAIVFEKPAVASGSVLGGAPGGRDTGLLD 78
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P+ +V VDAL+L+GGSA+GL AA GV L E RG+ + S VPIVP A++ D+ GG
Sbjct: 79 PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 138
Query: 122 ---WNCR-PTADFGYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
W P + GY+A AAG D +GT G G GA KGG+G+ASA G V
Sbjct: 139 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 198
Query: 177 VLAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+ VNA G+ + W A ++ GEF PA A L L N TT
Sbjct: 199 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALR--LKGVNLTA-TT 255
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ A R++I AHDGLAR + PAH P DGDT+FA ATG P E G A
Sbjct: 256 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATGDK--PQEGG--A 311
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIP-TYRDMFPGAF 342
+ L T V +ARAV GV A PV G YRD+ F
Sbjct: 312 HFAELCYLATIV-------MARAVARGVYEATALPVDGAQRAYRDIHGRGF 355
^ = sptrembl|Q8XKH3|Q8XKH3 Hypothetical protein
CPE1422.//:trembl|AP003190|AP003190_142 gene: "CPE1422"; product:
"conserved hypothetical protein"; Clostridium perfringens str. 13
DNA, complete genome, section 6/10. //:gp|AP003190|18145084
conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 325
0 70 140 210 280
| | | | | |325
sptrembl|Q8XKH3|Q8XKH | __________________________________________________
Local hits (HSPs) | ______________________________________________
Score = 468 (169.8 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 129/319 (40%), Positives = 170/319 (53%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
ITD+ G ++GH Q + G A G TV+L G G VD RGGAPGTRETDLL+P
Sbjct: 6 ITDIDGFKLGHAQDFE-----G---ATGCTVLLCEEGASGGVDVRGGAPGTRETDLLNPM 57
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVGG 121
V V A++L+GGSA+GL + GVM +LE + V D GV VPIV GAV+FDL G
Sbjct: 58 EMVDKVHAIVLSGGSAFGLDSCSGVMEYLEN--KNVGFDVGVAKVPIVCGAVLFDLACGN 115
Query: 122 WNCRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQSG 172
RP + G AC + +D G +G G GA G A+KGG G S +Q G
Sbjct: 116 PKIRPNKEMGLEACKNSETYLDSKNGNIGCGTGATVGKALNQKLAMKGGFG--SYAVQVG 173
Query: 173 -VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF 231
+ VG + VN+ G++VDP +A + + E+ + LA S+P F
Sbjct: 174 DLKVGAIVGVNSLGDIVDPNNNNKIIAGGLSQDRNSFINIEE-SLLANYSNPKNVFKG-- 230
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA- 290
NTTIG I + + A +IA A +G RTIRPAHT DGDT+F L++ V
Sbjct: 231 NTTIGCIVTNGDFNKAEANKIASMAQNGFGRTIRPAHTMFDGDTIFTLSSNKVKADINVV 290
Query: 291 GVPAALSPETQLVTAVGAA 309
G+ AA E ++ AV A
Sbjct: 291 GLLAAQVMEKAIIKAVKEA 309
^ = sptrembl|Q9RW87|Q9RW87 Hypothetical protein
DR0782.//:trembl|AE001933|AE001933_5 gene: "DR0782"; product:
"conserved hypothetical protein"; Deinococcus radiodurans R1
section 70 of 229 of the complete chromosome 1.
//:pironly|B75476|B75476 conserved hypothetical protein -
Deinococcus radiodurans (strain R1)//:gp|AE001933|6458494 conserved
hypothetical protein [Deinococcus radiodurans]
Length = 310
0 70 140 210 280
| | | | | |310
sptrembl|Q9RW87|Q9RW8 | __________________________________________________
Local hits (HSPs) | __________________________________________
Score = 434 (157.8 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 129/293 (44%), Positives = 161/293 (54%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
++T + G +VGH+ DP A G C V V+ PP G V + G +P TRE LL P
Sbjct: 17 TLTAIPGFQVGHWT--DPLAQTG----CTV-VLCPPEGAVASASFIGPSPATREGVLLSP 69
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDS--GVVPIVPGAVIFDLPVG 120
V V ALLL GGSA+GLAAA GV+R LEE RG+ ++ G VPIVP AVI+DL VG
Sbjct: 70 EKKVERVHALLLTGGSAFGLAAATGVVRVLEE--RGIGHETAFGRVPIVPAAVIYDLGVG 127
Query: 121 GWNCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAGA-LKGGV--GTASATLQ-SGVTV 175
RP G +A AA+ V G VG G GA AG L GGV G S L+ SGV V
Sbjct: 128 NPRVRPGEIEGEAAARAASSAPVERGQVGAGTGATAGKYLGGGVPGGLGSVCLERSGVRV 187
Query: 176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI 235
LAVVN G+V+D G+ L P +AA +P G NTT+
Sbjct: 188 AALAVVNPVGDVLDERGGV-----------LAGPGTGPVAAAF---TP-GDVE---NTTL 229
Query: 236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
+A + AL+ A CRR+A AA LAR I P+HT DGD+ F L++ A+ PP
Sbjct: 230 VAVATEHALTKAECRRLADAAQTALARVIHPSHTAWDGDSAFVLSSAAL--PP 280
^ = sptrembl|Q97Y10|Q97Y10 Hypothetical protein
SSO1540.//:trembl|AE006768|AE006768_8 gene: "SSO1540"; product:
"Conserved hypothetical protein"; Sulfolobus solfataricus section
127 of 272 of the complete genome. //:pironly|B90313|B90313
conserved hypothetical protein [imported] - Sulfolobus
solfataricus//:gp|AE006768|13814773 Conserved hypothetical protein
[Sulfolobus solfataricus]
Length = 282
0 60 120 180 240
| | | | | |282
sptrembl|Q97Y10|Q97Y1 | __________________________________________________
Local hits (HSPs) | _________________________________________________
Score = 218 (81.8 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 69/213 (32%), Positives = 103/213 (48%)
Query: 7 VGGIRVGHYQRLDPDASLGAGWACGVTVVLPP-PGTVGAVDCRGGAPGTRETDLLDPAN- 64
+ GI+VG Y D + GVTV+L + RGG+P T TDLL P +
Sbjct: 5 INGIKVGGYT--DEKSK------SGVTVILSEIENNTAGISQRGGSPATLGTDLLRPKHR 56
Query: 65 SVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPVGGWN 123
+ V+A++L G S +G+ D V+ L E G + + +PIV A IFD
Sbjct: 57 GNQSVNAIVLTGRSVFGIRVVDAVLMKLFELGVGFKISQNLKIPIVVSASIFDFYDN--T 114
Query: 124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-------SGVTVG 176
PT D+GY+A + G D+ +G G GA G LKG + A + Q + + +G
Sbjct: 115 IMPTPDWGYNAMSNLGYDIPIGRYWAGRGATVGKLKG-IKYAKPSGQGYYEIENNNLKIG 173
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAP 209
V++VVN+ GN+ D L + + EF + P
Sbjct: 174 VISVVNSIGNIYDEKGEL-LVGEETEEFKINTP 205
Score = 123 (48.4 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
NTP TT+GV+ ++ L+ + R+A +A +G + I+P + LDGDTVF +AT + VP
Sbjct: 203 NTP-GTTLGVVITNSKLNNSDACRVASSAENGFSSVIKPYNLSLDGDTVFTIATNEMEVP 261
Query: 288 PEAGVPAALSPETQLVTAV 306
+ + + V ++
Sbjct: 262 VDKVIALTYEASRESVLSI 280
^ = sptrembl|Q57326|Q57326 Endo-type 6-aminohexanoate OLIGOMER
hydrolase.//:trembl|D10686|FSNYLC_1 gene: "nylC"; product:
"endotype 6-aminohexanoate-oligomer hydrolase"; Flavobacterium sp.
plasmid pOAD2 gene for endotype 6-aminohexanoat-oligomer hydrolase,
complete cds. //:trembl|D26094|PPPOAD2_2 gene: "nylC"; product:
"endo-type 6-aminohexanoate oligomer hydrolase"; Flavobacterium
sp. plasmid pOAD2 DNA, whole sequence. //:pironly|A47039|A47039
nylon oligomer-degrading enzyme EIII nylC - Flavobacterium
sp.//:gp|D10686|216839 endotype 6-aminohexanoate-oligomer hydrolase
[Flavobacterium sp.]//:gp|D26094|488341 endo-type 6-aminohexanoate
oligomer hydrolase [Flavobacterium sp.]
Length = 355
0 80 160 240 320
| | | | | |355
sptrembl|Q57326|Q5732 | __________________________________________________
Local hits (HSPs) | ____________________________________________
Score = 266 (98.7 bits), Expect = 9.1e-23, P = 9.1e-23
Identities = 114/345 (33%), Positives = 155/345 (44%)
Query: 2 NSITDVGGIR-VGHYQ-RLD-PDASLGAGW----ACGVTVVLPPPGTVGAVDCRGGAPGT 54
N D+ +R G R D P S+GA G TV+ P G AVD RGGA G
Sbjct: 35 NDAFDLAPVRSTGREMLRFDFPGVSIGAAHYEEGPTGATVIHIPAGARTAVDARGGAVGL 94
Query: 55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVM-RWLE--EHRRGVAMDSGVVPIVPG 111
+ F A+ LAGG+ YGL A GV LE EHR G A + +V
Sbjct: 95 --------SGGYDFNHAICLAGGAGYGLEAGAGVSDALLERLEHRTGFAE----LQLVSS 142
Query: 112 AVIFDLPVGGWNCRPTADFGYSACAAAGVDVAV------GTVGVGVGARAGALKGG---- 161
AVI+D ++ R TA + A A ++ AV G G G+ A AG +
Sbjct: 143 AVIYD-----FSARSTAVYPDKALGRAALEFAVPGEFPQGRAGAGMSASAGKVDWDRTEI 197
Query: 162 VGTASATLQSGVTVGVLAVV--NAAGNVVDPATGLPWMADLVGEFALRAPPA-EQIAALA 218
G +A + G V +LAVV N G +VD A G + + +R P + A A
Sbjct: 198 TGQGAAFRRLG-DVRILAVVVPNPVGVIVDRA-GTVVRGNYDAQTGVRRHPVFDYQEAFA 255
Query: 219 QLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
+ P+ NTTI I + +SP + A H + R I+P HT +DGDT+FA
Sbjct: 256 EQVPPVTEAG---NTTISAIVTNVRMSPVELNQFAKQVHSSMHRGIQPFHTDMDGDTLFA 312
Query: 279 LATGAVAVPPEAGVPAA-LSPETQLVTAVGAAAADCLARAVL-AG 321
+ T + +P G LS TA+GA A++ + AVL AG
Sbjct: 313 VTTDEIDLPTTPGSSRGRLSVNA---TALGAIASEVMWDAVLEAG 354
^ = sptrembl|Q9I3M6|Q9I3M6 Hypothetical protein
PA1486.//:tremblnew|AE004577|AE004577_10 gene: "PA1486"; product:
"hypothetical protein"; Pseudomonas aeruginosa PAO1, section 138
of 529 of the complete genome. //:trembl|AE004577|AE004577_10 gene:
"PA1486"; product: "hypothetical protein"; Pseudomonas aeruginosa
PA01, section 138 of 529 of the complete genome.
//:pironly|G83460|G83460 hypothetical protein PA1486 [imported] -
Pseudomonas aeruginosa (strain PAO1)//:gp|AE004577|9947440
hypothetical protein [Pseudomonas aeruginosa PA01] [Pseudomonas
aeruginosa PAO1]//:gpnew|AE004577|9947440 hypothetical protein
[Pseudomonas aeruginosa PAO1]
Length = 366
0 80 160 240 320
| | | | | |366
sptrembl|Q9I3M6|Q9I3M | __________________________________________________
Local hits (HSPs) | __________________________________________
Score = 192 (72.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 102/339 (30%), Positives = 139/339 (41%)
Query: 2 NSITDVGGIRVGHY---QRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N+ITDV G+RVGH QR+D G GVT+V P G C G
Sbjct: 19 NAITDVPGVRVGHSTLNQRID-----GRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNG 73
Query: 59 LLDPANSVRFV-DALLLAGGSAYGLAAADGVMR--WLEEHRRGVAMDSGVVPIVPGAV-I 114
A + ++ +A LL A + G +R + E R + DSG+ +P +
Sbjct: 74 ---DATGLEWIREAGLLTTPIAITNTHSVGAVRDALIAEERAELG-DSGLYWCMPVVMET 129
Query: 115 FDLPVGG-WNCRPTA-DFGYS-ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL-- 169
FD + W A G + ACA +G V G+VG G G KGG+G+AS L
Sbjct: 130 FDGLLNDIWGQHVGARQVGEALACAESG-PVREGSVGGGTGMICHEFKGGIGSASRRLPA 188
Query: 170 -QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
Q G TVG L N G P VG L + SP
Sbjct: 189 EQGGWTVGALVQANHGQRRELRVDGYP-----VGR------------RLGDIPSPFSEEG 231
Query: 229 TP-FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
TP + + ++A DA L P C+R+A A G+ART GD A ATG +P
Sbjct: 232 TPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDS-SGDVFLAFATGNQDLP 290
Query: 288 PEAGVPAALSPETQL-------VTAVGAAAADCLARAVL 319
P L T L ++ + AAAA+ + A++
Sbjct: 291 PADYARKDLPQSTPLRMLNNDHISPLFAAAAEAVEEAIV 329
^ = sptrembl|Q8XZL2|Q8XZL2 Probable D-aminopeptidase protein (EC
3.4.11.-).//:trembl|AL646064|AL646064_58 gene: "RSc1383";
"RS04666"; product: "PROBABLE D-AMINOPEPTIDASE PROTEIN"; Ralstonia
solanacearum GMI1000 chromosome, complete sequence; segment 8/19
//:gp|AL646064|17428398 PROBABLE D-AMINOPEPTIDASE PROTEIN
[Ralstonia solanacearum]
Length = 341
0 70 140 210 280
| | | | | |341
sptrembl|Q8XZL2|Q8XZL | __________________________________________________
Local hits (HSPs) | _____________________________________________
Score = 178 (67.7 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 110/347 (31%), Positives = 145/347 (41%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWA-CGVTVVLPPPGT--VGAVD--CRGGAPGTRE 56
NSITDV GI VGH A+L G GVTVV P G + V C +
Sbjct: 17 NSITDVAGITVGH-------ATLAGGSIQTGVTVVRPHAGDPFLDKVPAACAVLNGFGKS 69
Query: 57 TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRR-GVAMDSGVVPIVPGAVIF 115
LL + L A G A V + +E H + G A + V P+V F
Sbjct: 70 VGLLQVEELGVLETPIALTNTFAVGDVARAQVQQAVEAHPQIGRAWPT-VNPLV-----F 123
Query: 116 DLPVGGWNCRPT---ADFGY-SACAAAGVDVAVGTVGVGVGARAGALKGGVGTAS--ATL 169
+ G N + D Y +AC AAG A G VG G G A +KGG+G+AS L
Sbjct: 124 ECNDGYLNDLQSFAVRDLHYYAACLAAGGAFAQGAVGAGRGMSAFGVKGGLGSASRVVAL 183
Query: 170 QSGV--TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF 227
+ G TVG L + N G AD+ A AP E+
Sbjct: 184 EDGTRRTVGALVLANFGVTANLTLAGRRIGADIARVLAEDAPGPEK-------------- 229
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRP-AHTPLDGDTVFALATGAVAV 286
+ I ++A DA L RR+A+ A GLART H GD A +T A V
Sbjct: 230 ----GSIIMLLATDAPLDARQLRRVALRAGAGLARTGSVFGHG--SGDIALAFST-AYTV 282
Query: 287 PPEAG--VPA-ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
P +PA A++ ET L + AAAD + +A++ + A+ V G
Sbjct: 283 PHLGARPMPAVAMTHETHL-DPLFQAAADSVEQAIVHALFYAETVTG 328
^ = sptremblnew|AAN69438|AAN69438 D-aminopeptidase
putative.//:tremblnew|AE016788|AE016788_136 gene: "PP3844";
product: "D-aminopeptidase putative"; Pseudomonas putida KT2440
section 15 of 21 of the complete genome. //:gp|AE016788|24985528
D-aminopeptidase putative [Pseudomonas putida KT2440]
Length = 377
0 80 160 240 320
| | | | | |377
sptremblnew|AAN69438| | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 153 (58.9 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 96/348 (27%), Positives = 138/348 (39%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
+N+ITDV G+RVGH A+ G GVT++ P G+ C G
Sbjct: 24 LNAITDVPGVRVGHSNVRGRTAN-GRDILTGVTIIEPRVGSTSQQPCFAGVHVLNGNG-- 80
Query: 61 DPANSVRFV-DALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVV----PIVPGAVI 114
A + ++ +A LL A+ + GV+R L R D G + P+V
Sbjct: 81 -DATGLEWIREAGLLTSPIAFTNTHSLGVVRDALIVLDREQQPDDGRIYWNMPVVLETYD 139
Query: 115 FDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
L + G++ + + A G V G VG G G KGG+GTAS L S
Sbjct: 140 GLLNDINGFHVKHEHVAEALSNAVIG-PVIEGAVGGGSGMICHEFKGGIGTASRRLSS-- 196
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT 233
T G V G +V G+ E + P + + Q SP + P
Sbjct: 197 TQGSWTV----GAIVQANHGIR------NELRVDGYPVGRY--MEQADSPFLKASLPHPG 244
Query: 234 TIGVIAC---DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA 290
++ C DA L P C R+A A GLART + GD A +TG VPP A
Sbjct: 245 MGSIVVCLATDAPLLPHQCTRLAQRASIGLART-GGGNEDHSGDIFIAFSTGN-HVPP-A 301
Query: 291 GVPAALSPETQLVTAVG--------AAAADCLARAVLAGVLNAQPVAG 330
+ +P T ++ V AA + + A++ +L A G
Sbjct: 302 AYESKRAPTTDNLSMVNNDHISELFLAATEAVEEAIINALLAADTAEG 349
^ = sptrembl|Q9V2J0|Q9V2J0 D-aminopeptidase.//:trembl|AJ248283|CNSPAX01_85
product: "D-aminopeptidase (EC 3.4.11.19)"; Pyrococcus abyssi
complete genome; segment 1/6 //:pironly|A75195|A75195
d-aminopeptidase. PAB0045 - Pyrococcus abyssi (strain
Orsay)//:gp|AJ248283|5457517 D-aminopeptidase (EC 3.4.11.19)
[Pyrococcus abyssi]
Length = 361
0 80 160 240 320
| | | | | |361
sptrembl|Q9V2J0|Q9V2J | __________________________________________________
Local hits (HSPs) | __________________________ _____________
Score = 117 (46.2 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 53/193 (27%), Positives = 84/193 (43%)
Query: 2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PG-T 54
N I+DV G++VGH + L G G GVTV+LP G + GGA G +
Sbjct: 19 NKISDVKGVKVGHVTLIRGKGKLIPGKGPVRTGVTVILPHEGNIYKEKVLGGAFVMNGYS 78
Query: 55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAV 113
+ L+ ++L + G A DG++ ++ + + +G V P+V
Sbjct: 79 KPVGLVQLWELGTIETPIVLTNTLSIG-TAVDGLLDYVLSENEDIGVTTGSVNPLVLECN 137
Query: 114 IFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-S 171
L + G + + + A A D G VG G G A KGG+G++S ++
Sbjct: 138 DSYLNDIRGRHVK--REHVVEAIKNAKEDFEEGAVGSGTGMSAFEFKGGIGSSSRIVKIE 195
Query: 172 G--VTVGVLAVVN 182
G T+G L + N
Sbjct: 196 GRSYTIGALVMTN 208
Score = 77 (32.2 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 28/96 (29%), Positives = 45/96 (46%)
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
I +IA DA L+ R+A A GLART A+ GD A +T E +
Sbjct: 241 IMIIATDAPLTSRQLNRLAKRAVVGLARTGGYAYNG-SGDIAVAFSTANKIKHYEKDIME 299
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
+ L++ + AAA+ + A++ +L A+ + G
Sbjct: 300 IKALPDSLLSPLFKAAAEAVEEAIINSLLEAKTMDG 335
^ = sptrembl|O57784|O57784 361AA long hypothetical
D-aminopeptidase.//:trembl|AP000001|AP000001_82 gene: "PH0078";
product: "361aa long hypothetical D-aminopeptidase"; Pyrococcus
horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).
//:pironly|D71227|D71227 probable D-aminopeptidase - Pyrococcus
horikoshii//:gp|AP000001|3256464 361aa long hypothetical
D-aminopeptidase [Pyrococcus horikoshii]
Length = 361
0 80 160 240 320
| | | | | |361
sptrembl|O57784|O5778 | __________________________________________________
Local hits (HSPs) | __________________________ _____________
Score = 123 (48.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 54/193 (27%), Positives = 83/193 (43%)
Query: 2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PG-T 54
N ITDV G++VGH + L G G GVT +LP G + GA G +
Sbjct: 19 NKITDVKGVKVGHVTLIKGKGKLIPGKGPVRTGVTAILPHEGNIYKEKVLAGAFVMNGYS 78
Query: 55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAV 113
+ L+ ++L + G A +G++ ++ E + + +G V P+V
Sbjct: 79 KPVGLIQLWELGTIETPIILTNTLSIG-TAVEGLLDYILEENEDIGVTTGSVNPLVLECN 137
Query: 114 IFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-S 171
L + G + + + A A D G VG G G A KGG+G+AS ++
Sbjct: 138 DSYLNDIRGRHVK--REHVVEAIKRADEDFEEGAVGAGTGMSAFEFKGGIGSASRIVEIE 195
Query: 172 G--VTVGVLAVVN 182
G TVG L + N
Sbjct: 196 GKKYTVGALVLSN 208
Score = 70 (29.7 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
I +IA DA L+ R+A A GLART A+ GD A +T E V
Sbjct: 241 IMIIATDAPLTGRQLNRVAKRAIVGLARTGGYAYNG-SGDIAVAFSTANRIKHYEKEVIE 299
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
+ +++ + A A+ + A++ +L A+ + G
Sbjct: 300 IKALPDSVISPLFKATAEAVEEAIINSLLEARTMDG 335
^ = sptrembl|Q8TZR1|Q8TZR1 D-aminopeptidase.//:trembl|AE010286|AE010286_8 gene:
"PF1924"; product: "d-aminopeptidase"; Pyrococcus furiosus DSM
3638, section 161 of 173 of the complete genome.
//:gp|AE010286|18894120 d-aminopeptidase [Pyrococcus furiosus DSM
3638]
Length = 361
0 80 160 240 320
| | | | | |361
sptrembl|Q8TZR1|Q8TZR | __________________________________________________
Local hits (HSPs) | __________________________ _____________
Score = 118 (46.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 53/193 (27%), Positives = 84/193 (43%)
Query: 2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PG-T 54
NSI+DV G++VGH + L G G GVT +LP G + GA G +
Sbjct: 19 NSISDVKGVKVGHVTLIKGRGKLIPGKGPVRTGVTAILPHDGNIYKEKVLAGAFVMNGYS 78
Query: 55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAV 113
+ L+ ++L + G A DG++ ++ + + +G V P+V
Sbjct: 79 KPVGLVQLWELGTIETPIILTNTLSIG-TAIDGLLDYVLRENEDIGVTTGSVNPLVLECN 137
Query: 114 IFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-S 171
L + G + + + A +A D G VG G G A KGG+G++S ++
Sbjct: 138 DSYLNDIRGRHVK--REHVVEAIESASKDFEEGAVGAGTGMSAFEFKGGIGSSSRIVEVE 195
Query: 172 G--VTVGVLAVVN 182
G TVG L + N
Sbjct: 196 GKKYTVGALVLSN 208
Score = 73 (30.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEAGVP 293
I ++A DA L+ R+A A GLART A+ GD V A +T + + +
Sbjct: 241 IMIVATDAPLTARQLNRLAKRAVVGLARTGGYAYNG-SGDVVVAFSTANKIKHYEKQEIS 299
Query: 294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
P++ L + + A A+ + A++ +L A+ + G
Sbjct: 300 IRALPDSVL-SPIFKATAEAVEEAIINSLLQAKTMDG 335
^ = sptrembl|Q8RAV6|Q8RAV6
L-aminopeptidase/D-esterase.//:trembl|AE013072|AE013072_5 gene:
"DmpA"; product: "L-aminopeptidase/D-esterase"; Thermoanaerobacter
tengcongensis strain MB4T, section 99 of 244 of the complete
genome. //:gp|AE013072|20516090 L-aminopeptidase/D-esterase
[Thermoanaerobacter tengcongensis]
Length = 364
0 80 160 240 320
| | | | | |364
sptrembl|Q8RAV6|Q8RAV | __________________________________________________
Local hits (HSPs) | ____________________________________________
Score = 148 (57.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 88/346 (25%), Positives = 139/346 (40%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGA----VDCRGGAPG 53
+N+ITDV G+ VGH + + L G G GVT ++P G + C G
Sbjct: 20 LNAITDVEGVTVGHVTLISGEGKLIPGKGPVRTGVTAIVPHSGNIFKEKLIASCYVGNGF 79
Query: 54 TRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGA 112
+ L+ ++L + G AADG++ ++ + + +G V P+V
Sbjct: 80 GKSIGLIQVKELGTLETPIILTNTLSVG-TAADGLIEYMLSFNEDIGITTGTVNPVVLEC 138
Query: 113 VIFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
L + G + + + +A +A + G+VG G G KGG+GTAS ++
Sbjct: 139 NDGYLNDIRGRHVKK--EHVIAAIKSAKNEFETGSVGAGTGMICHGFKGGIGTASRRIEI 196
Query: 172 G---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
G TVGVL + N G + D L + VG L+ E+I + A
Sbjct: 197 GGKVYTVGVLLLTNY-GRMED----LIFNGKNVGRM-LK----EEIKKGKE------AAK 240
Query: 229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
+ I VIA DA + R+A GLA+T GD A +T
Sbjct: 241 EDQGSCIIVIATDAPMDAHGLERVAKRGVLGLAKTGSFMGNG-SGDIAIAFSTANKIC-- 297
Query: 289 EAGVPA----ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
G P +SP + + V A + + AV + A+ + G
Sbjct: 298 HYGEPVMEIKTISPHSGDINKVFQAVVEAVEEAVWDSMFTAERIVG 343
^ = sptrembl|Q8UCH7|Q8UCH7 Aminopeptidase.//:trembl|AE008163|AE008163_9 gene:
"AGR_C_4562"; product: "AGR_C_4562p"; Agrobacterium tumefaciens
str. C58 circular chromosome, section 221 of 254 of the complete
sequence. //:trembl|AE009197|AE009197_9 gene: "Atu2510"; product:
"aminopeptidase"; Agrobacterium tumefaciens strain C58 circular
chromosome, section 223 of 256 of the complete sequence.
//:pironly|AC2885|AC2885 aminopeptidase Atu2510 [imported] -
Agrobacterium tumefaciens (strain C58,
Dupon//:pironly|H97660|H97660 D-aminopeptidase (PAB0045) (strain
orsay) [imported] - Agrobacterium
tumefaciens//:gp|AE008163|15157697 AGR_C_4562p [Agrobacterium
tumefaciens str. C58 (Cereon)]//:gp|AE009197|17741004
aminopeptidase [Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 362
0 80 160 240 320
| | | | | |362
sptrembl|Q8UCH7|Q8UCH | __________________________________________________
Local hits (HSPs) | ____ _________________________
Score = 102 (41.0 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 125 RPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-SG--VTVGVLA 179
RPT D +A AA G VA G VG G G A +KGG+GTAS + SG T+G+L
Sbjct: 154 RPTVDEISAALKNAATG-PVAEGGVGAGTGTVAFGMKGGIGTASRRVTISGQAYTIGILV 212
Query: 180 VVNAAGNVVDPATGLPWMA 198
N G+++ G P+++
Sbjct: 213 QSNYGGHLL--VCGKPYVS 229
Score = 62 (26.9 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 26/97 (26%), Positives = 41/97 (42%)
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA-VAVPPEAGVPAA 295
++A DA LS +R+A + GLART A + GD A +T + P
Sbjct: 242 IVATDAPLSSRNLKRLAARSFGGLART-GAALSNGSGDYALAFSTDERLRRTPARRKAVT 300
Query: 296 LSPE--TQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
PE ++ + AA + A+L + A +G
Sbjct: 301 EYPELSNDAISPLFEAAIEATEEAILNSLCAATTTSG 337
Score = 53 (23.7 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV 42
+N+ITDV G+ GH ++ G G T +LP G +
Sbjct: 34 LNAITDVEGVTSGHSTVIE-----GETIRTGATAILPHGGNL 70
Score = 39 (18.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 264 IRPAHTPLDGDTVFALATGA 283
+ P H DG V +AT A
Sbjct: 228 VSPEHKDKDGSIVIIVATDA 247
^ = sptrembl|Q8YBZ5|Q8YBZ5 D-aminopeptidase (EC
3.4.11.19).//:trembl|AE009708|AE009708_8 gene: "BMEII0741";
product: "D-AMINOPEPTIDASE"; Brucella melitensis strain 16M
chromosome II, section 70 of 107 of the complete sequence.
//:pironly|AD3602|AD3602 D-stereospecific aminopeptidase (EC
3.4.11.19) [imported] - Brucella melitensis //:gp|AE009708|17984931
D-AMINOPEPTIDASE [Brucella melitensis]
Length = 340
0 70 140 210 280
| | | | | |340
sptrembl|Q8YBZ5|Q8YBZ | __________________________________________________
Local hits (HSPs) | ___________________________ _______________
Score = 112 (44.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 56/202 (27%), Positives = 86/202 (42%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV------GAVDCRGGAPGTR 55
N+ITDV G++VGH+ D + + G VT ++P G + A D G G +
Sbjct: 21 NAITDVPGVQVGHHTLRDGNINTG------VTAIIPHGGNLYRRKVLAACDIINGF-G-K 72
Query: 56 ETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAVI 114
T L+ +LL G A+ ++R + + V P+V
Sbjct: 73 STGLVQIEELGSLETPILLTNTFGVG-TCANALIRDAIAANPDIGRATATVNPVV--LEC 129
Query: 115 FDLPVGGWNCRP-TADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-SG 172
D P+ T + A +A V+V G VG G G KGG+GT+S + G
Sbjct: 130 NDGPLNDIQAMAVTEEHARLALRSAQVNVPQGNVGAGTGMTCFGFKGGIGTSSRRFEFDG 189
Query: 173 VT--VGVLAVVN--AAGNVVDP 190
+G+LA+ N AG++V P
Sbjct: 190 KLHHLGILALTNFGRAGDLVLP 211
Score = 65 (27.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 30/111 (27%), Positives = 42/111 (37%)
Query: 222 SPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALAT 281
SP + I V+A D AL +R+ GLAR + GD T
Sbjct: 217 SPKAETQPEKGSVILVLATDVALEHRQLKRVTRRCGAGLAR-LGAFWGHGSGDIAIGFTT 275
Query: 282 GAVAVPPEAG--VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
G E +P + E ++ T AAA+ AVL + AQ + G
Sbjct: 276 GITFDHDEPNDFIPMMILNENRIDTLF-RAAAEATEEAVLNSMCRAQAMRG 325
^ = sptrembl|Q8CVA7|Q8CVA7 D-aminopeptidase.//:tremblnew|AP004596|AP004596_4
gene: "OB0850"; product: "D-aminopeptidase"; Oceanobacillus
iheyensis genomic DNA, section 4/13. //:trembl|AP004596|AP004596_4
gene: "OB0850"; product: "D-aminopeptidase"; Oceanobacillus
iheyensis genomic DNA, section 4/13. //:gp|AP004596|22776531
D-aminopeptidase [Oceanobacillus iheyensis HTE831]
Length = 328
0 70 140 210 280
| | | | | |328
sptrembl|Q8CVA7|Q8CVA | __________________________________________________
Local hits (HSPs) | _____________________________ _______
Score = 119 (46.9 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 52/204 (25%), Positives = 87/204 (42%)
Query: 4 ITDVGGIRVGH---YQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTRET 57
ITDV G++VGH Y++++ ++ GVT +LP PG + G G +T
Sbjct: 11 ITDVHGVQVGHTTLYEKINEKDTI----CTGVTAILPHPGNLFRQKVIAGCSVINGFGKT 66
Query: 58 DLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDL 117
L N + +++ ++ + G + ++ + +G + ++ G D
Sbjct: 67 TGLVQLNELGLIESPIMLTNTLSIAPVMQGTLTYMLNRTEEIGDTTGTINLIVGECN-DS 125
Query: 118 PVGGWNCRP-TADFGYSACAAAGVDVAV-GTVGVGVGARAGALKGGVGTASATLQ-SGV- 173
+ + T A +A + + G VG G G + KGG+GTAS +Q V
Sbjct: 126 YLNSIRLQAITPSHAIKAIESASNESSEEGAVGAGTGMQCFGYKGGIGTASRLIQVEDVI 185
Query: 174 -TVGVLAVVNAAGNVVDPATGLPW 196
T+G L V N GN AT W
Sbjct: 186 YTLGGLVVSNY-GNRKQ-ATFADW 207
Score = 56 (24.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALAT 281
TP + + ++A DA LS RIA GL RT A GD A +T
Sbjct: 214 TPDGSIMMILATDAPLSDRQLNRIAKRCAAGLGRT-GSALDHGSGDIAIAFST 265
^ = sptrembl|Q930Z6|Q930Z6 Putative
D-aminopeptidase.//:trembl|AE007199|AE007199_4 gene: "SMa0095";
product: "putative D-aminopeptidase"; Sinorhizobium meliloti
plasmid pSymA section 5 of 121 of the complete plasmid sequence.
//:pironly|H95267|H95267 probable D-aminopeptidase [imported] -
Sinorhizobium meliloti (strain 1021) maga//:gp|AE007199|14523107
putative D-aminopeptidase [Sinorhizobium meliloti]
Length = 345
0 70 140 210 280
| | | | | |345
sptrembl|Q930Z6|Q930Z | __________________________________________________
Local hits (HSPs) | ___________________________ ____________
Score = 122 (48.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 61/205 (29%), Positives = 87/205 (42%)
Query: 2 NSITDVGGIRVGHYQRLDPDASL-GAGWACGVTVVLPPPGTVGAVDCRGGAP---GT-RE 56
N+ITDV G+ VGH SL G G GVT +LP G V V R G +
Sbjct: 21 NAITDVAGVSVGH-------RSLRGEGLFTGVTAILPHAGDVFRVKPRAAVEVINGFGKS 73
Query: 57 TDLLDPANSVRFVDALLLAGGSAYGLAAA-DGVMRWLEEHRRGVAMDSGVVPIVPGAVIF 115
L+ A ++L + +G+AA + ++R + + V A++
Sbjct: 74 AGLMQVAEIGTIETPIVLT--NTFGVAACTEALVRRAISANPAIGRKTSTV----NALVC 127
Query: 116 DLPVGGWN-----CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
+ G N AD + AA V G VG G G A K G+GTAS ++
Sbjct: 128 ECNDGSINDIQALAVTPADAEAALDAARTGPVEQGAVGAGSGMTAFGFKAGIGTASRRMR 187
Query: 171 SG---VTVGVLAVVN--AAGNVVDP 190
G T+G L + N AAG++V P
Sbjct: 188 VGKRDFTLGTLVLANFGAAGDLVLP 212
Score = 48 (22.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 27/91 (29%), Positives = 37/91 (40%)
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
+ I V+A D L+ +R+A A GLAR + GD T A P E
Sbjct: 229 SVIVVMATDLPLADRQLQRVARRAGAGLAR-LGAFWGHGSGDVALCFTT---ADPVEHEP 284
Query: 293 PAALSPETQL----VTAVGAAAADCLARAVL 319
A + + +L + AAAD AVL
Sbjct: 285 ATAFTTQERLADGHIDIAFRAAADTTQEAVL 315
^ = sptrembl|Q98IB6|Q98IB6 Probable
D-aminopeptidase.//:trembl|AP002999|AP002999_285 gene: "mlr2477";
product: "probable D-aminopeptidase"; Mesorhizobium loti DNA,
complete genome, section 6/21. //:gp|AP002999|14022992 probable
D-aminopeptidase [Mesorhizobium loti]
Length = 343
0 70 140 210 280
| | | | | |343
sptrembl|Q98IB6|Q98IB | __________________________________________________
Local hits (HSPs) | _____________________________ _____________
Score = 104 (41.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 58/213 (27%), Positives = 88/213 (41%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTRETD 58
N+ITDV G+RVGH + D + G VT +LP G + + G +T
Sbjct: 21 NAITDVPGVRVGHCTLRNGDINTG------VTAILPHGGNLFRKKVTAASHVINGFGKTI 74
Query: 59 LLDPANSVRFVDA-LLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAVIFD 116
L + ++ +LL + G A ++R + +G V P+V G D
Sbjct: 75 GLTQVQELGSIETPVLLTNTLSVGTCATT-LIRDAIRQNPDIGRTTGTVNPLV-GECN-D 131
Query: 117 LPVGGWNCRPTAD-FGYSACAAAGV-DVAVGTVGVGVGARAGALKGGVGTASA--TLQSG 172
P+ ++ +A A A +V G VG G G KGG+G+AS L G
Sbjct: 132 GPLNDIQALAISEEHALAALADAHEGEVEQGNVGAGTGMTCFGFKGGIGSASRRIALGGG 191
Query: 173 VTVGVLAVVNAA--GNVVDPATGLPWMADLVGE 203
+GVL + N G++V P P G+
Sbjct: 192 HHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGD 224
Score = 65 (27.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG--VPA 294
V+A D L R+A A G+AR + GD A +TG + E+ VP
Sbjct: 232 VLATDLPLEHRQLERVARRAGAGIAR-LGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPL 290
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E + + + AAA+ AVL +L+A+ G
Sbjct: 291 LALNEAR-IDILFRAAAEATQEAVLNSMLSAEAFTG 325
^ = tremblnew|AF543480|AF543480_6 product: "putative aminopeptidase";
Uncultured bacterium plasmid pAK106 SodA (sodA) gene, partial cds;
GreA (greA), MutY (mutY), putative aminopeptidase, and putative
response regulator genes, complete cds; and unknown genes.
//:gpnew|AF543480|28875488 putative aminopeptidase [uncultured
bacterium]
Length = 115
0 30 60 90
| | | | |115
tremblnew|AF543480|AF | __________________________________________________
Local hits (HSPs) | __________________________
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 136 AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG---VTVGVLAVVNAAGNVVDPAT 192
AA VA G+VG G G A KGG+GT+S + +G TVGVL N G++V
Sbjct: 32 AARSGPVAEGSVGAGTGTIAFGWKGGIGTSSRAVTAGGSSYTVGVLVQSNYGGDLV--MA 89
Query: 193 GLP 195
G+P
Sbjct: 90 GVP 92
^ = sptrembl|Q98JC5|Q98JC5 Hypothetical protein
mll2007.//:trembl|AP002998|AP002998_263 gene: "mll2007";
Mesorhizobium loti DNA, complete genome, section 5/21.
//:gp|AP002998|14022632 hypothetical protein [Mesorhizobium loti]
Length = 289
0 60 120 180 240
| | | | | |289
sptrembl|Q98JC5|Q98JC | __________________________________________________
Local hits (HSPs) | ___________________________________
Score = 115 (45.5 bits), Expect = 0.00069, P = 0.00068
Identities = 69/218 (31%), Positives = 91/218 (41%)
Query: 119 VGGWNCRPTADFGYSACAAAGVDVAVGTVG-VGVGARAGALKGGVGTASATLQSGVTV-G 176
VGG G S A+ GV +VG VG VGA GA GV + +GV+ G
Sbjct: 41 VGGLGLGAGVSAG-SKGASVGVGASVGGVGGANVGASVGAGNAGVDASGNVGNAGVSASG 99
Query: 177 VL--AVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+ A V+A GNV ATG ++ VG L A P+ + ++A A + T
Sbjct: 100 NVGSAGVSAGGNV--GATG-GGLSTGVG---LGADPSAETGSVAASGGSAAAATASGSAT 153
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLA--RTIRPAHTPLDGDTVFALATGAVAVPPEA-- 290
G A +A + A A A +A +RP GD LA G P EA
Sbjct: 154 TGSAATGSAATATATTATAKTARQSIALPTVLRPTKAG-QGD----LARGYPFAPLEALK 208
Query: 291 ---GVPAA--LSPETQLVTAVGAAAADCLARAVLAGVL 323
G PAA L+ +++A A RAV AG L
Sbjct: 209 AKPGTPAAVVLACRAAIMSAAKPLGA-VRVRAVSAGAL 245
^ = sptrembl|Q9L0P1|Q9L0P1 Hypothetical protein
SCO4250.//:tremblnew|AL939119|SCO939119_128 gene: "SCO4250";
"SCD8A.23"; product: "conserved hypothetical protein SCD8A.23";
Streptomyces coelicolor A3(2) complete genome; segment 16/29
//:trembl|AL939119|SCO939119_128 gene: "SCO4250"; "SCD8A.23";
product: "conserved hypothetical protein SCD8A.23"; Streptomyces
coelicolor A3(2) complete genome; segment 16/29
//:gp|AL939119|7242771 conserved hypothetical protein SCD8A.23
[Streptomyces coelicolor A3(2)]//:gpnew|AL939119|7242771 conserved
hypothetical protein SCD8A.23 [Streptomyces coelicolor A3(2)]
Length = 1111
0 230 460 690 920
| | | | | |1111
sptrembl|Q9L0P1|Q9L0P | __________________________________________________
Local hits (HSPs) | ___________________
Score = 120 (47.3 bits), Expect = 0.0014, P = 0.0014
Identities = 98/320 (30%), Positives = 111/320 (34%)
Query: 25 GAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY---- 80
GA G V+ PG+VGA D GA G E + +SVR DA G A
Sbjct: 111 GAVGEAGAVTVVAGPGSVGA-DGLAGAAGAAEGGAI--GSSVRRSDARWTGGSGAPPGCA 167
Query: 81 --GLAAADG----VMRWLEEHRRGVAMDSGVVPIV-PGAVIFDLPVG----GWNCRPTAD 129
G A DG RW G A G V V P V +PVG G P D
Sbjct: 168 EDGRAGGDGWAADARRWTGGRPAGAAGTPGAVAEVRPPPVASPVPVGRAPDGAAVSPP-D 226
Query: 130 FGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ--SGVTVGVLAVVNAAGNV 187
AA V VG GA A G G A A + +G VG A + AAG
Sbjct: 227 SAAGVVRAAACRVGAPAVGPSAGAAARWTGGPTGVAPADGEGAAGPPVGG-APLPAAGVA 285
Query: 188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP-LGAFNTPFNTTIGVIACDAAL-S 245
D + A A P A S P G GV+ + S
Sbjct: 286 ADRESARRTGACPCA--ASEVVPDAGGAVRPWASDPGSGCAAARCTGAPGVVCGEPVRRS 343
Query: 246 PAACRRIAIAAHDGLARTIRPAH--TPLDGDTVFALATGAVAVPP-EAGVPAALSPETQL 302
PA R A +A PA P GA AV P AG A LSP
Sbjct: 344 PADAGRSGCPAARRVAGAASPAGGVVPPSVRRTARCTGGAPAVAPLPAGADAGLSPGRTA 403
Query: 303 VTAVGAAAADCL-ARAVLAG 321
GAA A L A +V AG
Sbjct: 404 GRRAGAADAGPLPAASVGAG 423
Score = 95 (38.5 bits), Expect = 0.76, P = 0.53
Identities = 101/339 (29%), Positives = 120/339 (35%)
Query: 11 RVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVD 70
RVG + P A A W G T V P G A GGAP D S R
Sbjct: 238 RVGA-PAVGPSAGAAARWTGGPTGVAPADGEGAAGPPVGGAPLPAAGVAAD-RESARRTG 295
Query: 71 ALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTAD 129
A A + A G +R W + G A + PG V + PV R AD
Sbjct: 296 ACPCAASEV--VPDAGGAVRPWASDPGSGCA--AARCTGAPGVVCGE-PVR----RSPAD 346
Query: 130 FGYSACAAAG-VDVAVGTVG--VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGN 186
G S C AA V A G V R A G A A L +G G L+ AG
Sbjct: 347 AGRSGCPAARRVAGAASPAGGVVPPSVRRTARCTGGAPAVAPLPAGADAG-LSPGRTAGR 405
Query: 187 VVDPATGLPWMADLVG-----EFALR----APPAEQIAALAQL--SSPLGAFNTPFNTTI 235
A P A VG A R P AE + A A + S PL
Sbjct: 406 RAGAADAGPLPAASVGAGPDGRAAARWTGGVPGAEPLFAGAGVDGSPPLDG-RAVARWAG 464
Query: 236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAA 295
G + D LSP A A + G A P + T GAVA+ AGV
Sbjct: 465 GAV--DVELSPGAVA--AGSPPPGCAG--EPVGRAVARWT--GGVPGAVALSAGAGVEGV 516
Query: 296 LSPETQLVTA-VGAAAADCL-ARAVLAGVLNAQPVAGIP 332
L P+ + V G L AV+AG+L P +P
Sbjct: 517 LLPDGRAVARWTGGVPGVVLPVGAVVAGLL---PGCAVP 552
^ = sptrembl|Q987V4|Q987V4 D-aminopeptidase.//:trembl|AP003010|AP003010_141
gene: "mll6895"; product: "D-aminopeptidase"; Mesorhizobium loti
DNA, complete genome, section 17/21. //:gp|AP003010|14026499
D-aminopeptidase [Mesorhizobium loti]
Length = 378
0 80 160 240 320
| | | | | |378
sptrembl|Q987V4|Q987V | __________________________________________________
Local hits (HSPs) | ______________________________________
Score = 113 (44.8 bits), Expect = 0.0019, P = 0.0019
Identities = 84/321 (26%), Positives = 129/321 (40%)
Query: 2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PGTR 55
N+ITD+ G+ VG+ + D L G G GVT +LP P A+ G G
Sbjct: 32 NAITDLPGVAVGYATLISGDGPLIVGKGPVRTGVTAILPRPLADLAIPVFAGIFSQNGNG 91
Query: 56 E---TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPG 111
E + +++ + F + + + G++ DG +RW++ A+DS +P+
Sbjct: 92 ELTGSHIIEETGAFNF--PITITNTHSCGVSR-DGTLRWMQRVLP-TAVDSAWGLPVA-- 145
Query: 112 AVIFDLPVGGWNCRPTADFGYSACA---AAGVDVAVGTVGVGVGARAGALKGGVGTASAT 168
A +D + N F + A A A G + G+VG G G K G GTAS
Sbjct: 146 AETYDGFLNDINGHHLT-FDHVAQALDDATGGPIEEGSVGGGTGMITFGFKAGSGTASRI 204
Query: 169 LQ---SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALR--APPAEQIAALAQLSSP 223
+ + TVG N GL ++L E A+R P AE+
Sbjct: 205 VGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELT-EPAIREGTPRAEK---------- 253
Query: 224 LGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA-HTPLDGDTVFALATG 282
+ I V+A DA P +R+A G+A T H+ D F+ A
Sbjct: 254 --------GSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAFSTANP 305
Query: 283 AVAVPPEAGVPAA-LSPETQL 302
A A+ P + A P+T +
Sbjct: 306 AAALAPSGRIAKADFIPDTDI 326
^ = pdb|1B65|1B65-A STRUCTURE OF L-AMINOPEPTIDASE D-ALA-ESTERASE/AMIDASE FROM
OCHROBACTRUM ANTHROPI, A PROTOTYPE FOR THE SERINE AMINOPEPTIDASES,
REVEALS A NEW VARIANT AMONG THE NTN HYDROLASE FOLD
//:sptrembl|Q59632|Q59632 D-aminopeptidase (EC
3.4.11.19).//:trembl|X97669|OADAMP_1 gene: "dmpA"; product:
"D-aminopeptidase"; O.anthropi dmpA gene //:gp|X97669|1310704
D-aminopeptidase [Ochrobactrum anthropi]
Length = 375
0 80 160 240 320
| | | | | |375
pdb|1B65|1B65-A | __________________________________________________
Local hits (HSPs) | ___________________________________________
Score = 112 (44.5 bits), Expect = 0.0024, P = 0.0024
Identities = 78/344 (22%), Positives = 122/344 (35%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWAC--GVTVVLPPPGTVGAVDCRGGAPGTRETDL 59
N+ITDV G+ VG ++ + G GVT +LP + V G
Sbjct: 27 NAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGE 86
Query: 60 LDPANSVR----FVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPG-AVI 114
+ + + F+ +++ G+A +RW+ + + I+P A
Sbjct: 87 MTGTHWIEDGGYFLGPVVITNTHGIGMAH-HATVRWMVDRYASTYQTDDFLWIMPVVAET 145
Query: 115 FDLPVGGWNCRPT--ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG 172
+D + N P AD + A V G G G G KGG GTAS ++ G
Sbjct: 146 YDGALNDINGFPVTEADVRKALDNVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFG 205
Query: 173 ---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
T+G L N G+P VG+ P Q+ +
Sbjct: 206 GRSFTIGALVQANHGQRDWLTIAGVP-----VGQHMRDGTPQSQLQERGSI--------- 251
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA-HTPLDGDTVFALATGAVAVPP 288
I V+A D L P +R+A A G+ R P + D F+ A
Sbjct: 252 -----IVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNSGDIFIAFSTANQRPMQHR 306
Query: 289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
A + + V AA D + AV+ ++ A+ + G P
Sbjct: 307 SAPFLDVEMVNDEPLDTVYLAAVDSVEEAVVNAMIAAEDMGGTP 350
^ = sptrembl|Q9X6K5|Q9X6K5 Hypothetical 13.0 kDa
protein.//:trembl|AF139719|AF139719_8 product: "unknown";
Klebsiella oxytoca plasmid pACM1 DNA primase (pri) gene, complete
cds; and unknown genes. //:gp|AF139719|4929025 unknown [Klebsiella
oxytoca]
Length = 153
0 30 60 90 120 150
| | | | | |153
sptrembl|Q9X6K5|Q9X6K | __________________________________________________
Local hits (HSPs) | ________________________________________
Score = 101 (40.6 bits), Expect = 0.0028, P = 0.0028
Identities = 43/132 (32%), Positives = 62/132 (46%)
Query: 126 PTADFG--YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNA 183
P+ G YS AAAG +A G V G A AGAL G ++ + + G + +A
Sbjct: 28 PSRSVGAAYSGSAAAGA-LATGAVSSG-SAAAGALATGAASSGSAAAGALATGAASTGSA 85
Query: 184 AGNVVDPATG-LPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDA 242
A V+ ATG + + G A A AA A L++ GA +T + GV+A A
Sbjct: 86 ASGVL--ATGAVSTSSAAAGALATGAASTASAAAGA-LAT--GAASTG-SAAAGVLATGA 139
Query: 243 ALSPAACRRIAI 254
A S AA +++
Sbjct: 140 AFSGAATAALSV 151
^ = sptrembl|Q8VHG2|Q8VHG2 Angiomotin.//:trembl|AF461135|AF461135_1 product:
"angiomotin"; Mus musculus angiomotin mRNA, complete cds.
//:gp|AF461135|18479137 angiomotin [Mus musculus]
Length = 891
0 180 360 540 720
| | | | | |891
sptrembl|Q8VHG2|Q8VHG | __________________________________________________
Local hits (HSPs) | _____________
Score = 116 (45.9 bits), Expect = 0.0029, P = 0.0029
Identities = 59/233 (25%), Positives = 85/233 (36%)
Query: 107 PIVPGAVIFDL--PVGGWNCRPTADFGYSACAAAGVD-VAVGTVG-VGVGARAGALKGGV 162
P+ P + G +C + G + A V ++ G V A A A+
Sbjct: 587 PVPPSTPLLSAHSKTGSRDCSTQTERGPESTKTAAVTPISAPMAGPVAAAAPAAAINATA 646
Query: 163 GTASATLQSGVTVGVLAVVNAAGNVVDPATGL--PWMADLVGEFALRAPPAEQIAALAQL 220
T +AT + T+ V A A V PA P A+ A A PA ++A +
Sbjct: 647 ATNTATAATNTTIMVAAAPVAVAAVAAPAAAAATPSPANAAA-LAAAAAPATSVSAATSV 705
Query: 221 SSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALA 280
S+ V+ A +SPAA +I AA + TP A A
Sbjct: 706 SAANSISPAAPVAPAAVVPPAAPVSPAAAVQIPAAA----------SLTPATVSPTAATA 755
Query: 281 TGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
T AVA A + AA + T + A +A + A + AQ A PT
Sbjct: 756 TAAVAAATTAAITAAAAAATTAIQVAPATSAPVPSPASIPAPATAQASAPTPT 808
Score = 94 (38.1 bits), Expect = 0.76, P = 0.53
Identities = 48/178 (26%), Positives = 65/178 (36%)
Query: 138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWM 197
A VAV V A A +A +V V+AA N + PA P
Sbjct: 662 AAAPVAVAAVAAPAAAAATPSPANAAALAAAAAPATSVSAATSVSAA-NSISPAA--P-- 716
Query: 198 ADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAH 257
V A+ PPA ++ A + P A TP T+ A A + AA AI A
Sbjct: 717 ---VAPAAV-VPPAAPVSPAAAVQIPAAASLTP--ATVSPTAATATAAVAAATTAAITAA 770
Query: 258 DGLART---IRPAHT-PLDGDTVF---ALATGAVAVPPEAGVPAALSPETQLVTAVGA 308
A T + PA + P+ A A + P +A PA P + + T A
Sbjct: 771 AAAATTAIQVAPATSAPVPSPASIPAPATAQASAPTPTQASTPAPTEPPSPVPTPTPA 828
^ = sptrembl|Q8UK81|Q8UK81 Aminopeptidase.//:trembl|AE007894|AE007894_6 gene:
"AGR_pAT_343"; product: "AGR_pAT_343p"; Agrobacterium tumefaciens
str. C58 plasmid AT, section 22 of 50 of the complete sequence.
//:trembl|AE008947|AE008947_1 gene: "Atu5242"; product:
"aminopeptidase"; Agrobacterium tumefaciens str. C58 AT plasmid
section 22 of 49 of the complete sequence. //:pironly|AE3189|AE3189
aminopeptidase Atu5242 [imported] - Agrobacterium tumefaciens
(strain C58, Dupon//:gp|AE007894|15162009 AGR_pAT_343p
[Agrobacterium tumefaciens str. C58
(Cereon)]//:gp|AE008947|17743680 aminopeptidase [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 384
0 80 160 240 320
| | | | | |384
sptrembl|Q8UK81|Q8UK8 | __________________________________________________
Local hits (HSPs) | _________________________ ____________
Score = 100 (40.3 bits), Expect = 0.0061, Sum P(2) = 0.0061
Identities = 56/198 (28%), Positives = 79/198 (39%)
Query: 1 MNSITDVGGIRVG--HYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTR 55
+N+ITD+ GI VG + P GVT +LP V G G
Sbjct: 27 LNAITDIAGIHVGVSTIREEVPRPGRKLPVRTGVTAILPHATASEPVPVFAGIHRFNGNG 86
Query: 56 E---TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWL-EEHRRGVAMDSG--VVPIV 109
E + +D FV +L+ + G+A RW+ + + D ++P+V
Sbjct: 87 EMTGSHWIDDGGY--FVGPVLITNTHSVGIAHHSAA-RWMIDRYSATYEGDEQLWIMPVV 143
Query: 110 PGAVIFDLPVGGWNCRP-TADFGYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASA 167
A +D + N + T D + A A VA G+VG G G A KGG GTAS
Sbjct: 144 --AETYDGLLNDINGQHVTVDHVFEALNGANTGPVAEGSVGGGTGMIAYGFKGGTGTASR 201
Query: 168 TLQSG---VTVGVLAVVN 182
+ G TV L N
Sbjct: 202 RIAVGGEEFTVAALVQAN 219
Score = 49 (22.3 bits), Expect = 0.0061, Sum P(2) = 0.0061
Identities = 24/102 (23%), Positives = 46/102 (45%)
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLAR--TIRPAHTPLDGDTVFALATGAV-AVPPEAG 291
I VIA D L+P +++A G+ R T+ +++ GD A +T + +AG
Sbjct: 251 IVVIATDVPLAPHQLQKLARRGAIGIGRNGTVGGSNS---GDIFLAFSTANPHPMRHKAG 307
Query: 292 -VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
+ + + ++ V A + AV+ ++ A+ G P
Sbjct: 308 PLLSIVMVNDDVLDPVYQAVVQSVEEAVVNAMIAAETTGGTP 349
^ = sptrembl|O50430|O50430 Hypothetical protein
Rv1174c.//:trembl|AE006998|AE006998_9 gene: "MT1211"; product:
"hypothetical protein"; Mycobacterium tuberculosis CDC1551,
section 84 of 280 of the complete genome.
//:trembl|AL010186|MTV005_9 gene: "Rv1174c"; product: "hypothetical
protein Rv1174c"; Mycobacterium tuberculosis H37Rv complete
genome; segment 51/162 //:pironly|F70875|F70875 hypothetical
protein Rv1174c - Mycobacterium tuberculosis (strain
H37RV)//:gp|AL010186|2695958 hypothetical protein Rv1174c
[Mycobacterium tuberculosis H37Rv]//:gp|AE006998|13880799
hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length = 110
0 30 60 90
| | | | |110
sptrembl|O50430|O5043 | __________________________________________________
Local hits (HSPs) | _________________________________________
Score = 86 (35.3 bits), Expect = 0.0074, P = 0.0073
Identities = 32/91 (35%), Positives = 42/91 (46%)
Query: 142 VAVGTVGVGVGARAGALKGGVGTASATLQSGV--TVGVLAVVNAAGNVVDPATGLPWMAD 199
+++ + GVGA A +L G G ASA V T V AA N DP + A
Sbjct: 3 LSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFNAS 62
Query: 200 LVGEFALR----APPAEQIAALAQLSSPLGA 226
V + LR APP ++ A AQL + GA
Sbjct: 63 PVAQSYLRNFLAAPPPQRAAMAAQLQAVPGA 93
^ = sptrembl|Q8XRM8|Q8XRM8 Probable signal peptide
protein.//:trembl|AL646081|AL646081_1 gene: "RSp0803"; "RS01904";
product: "PROBABLE SIGNAL PEPTIDE PROTEIN"; Ralstonia solanacearum
GMI1000 megaplasmid, complete sequence; segment 6/11
//:gp|AL646081|17431275 PROBABLE SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum]
Length = 667
0 140 280 420 560
| | | | | |667
sptrembl|Q8XRM8|Q8XRM | __________________________________________________
Local hits (HSPs) | _____________________________________________
Score = 107 (42.7 bits), Expect = 0.020, P = 0.020
Identities = 74/287 (25%), Positives = 113/287 (39%)
Query: 38 PPGTV-GAVDCRGGAPGTRE-TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEH 95
P G + G V+ G G+ T L+ AL AGG++ LA G + +
Sbjct: 394 PTGALSGVVNTVTGTLGSNSPTGALNGVVGT-VTGALGNAGGASNLLAPVQGTVTQVVST 452
Query: 96 RRGVAMDSGVVPIVP--GAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGA 153
G A S + PI G + LPVGG P G A V A+G+VG G GA
Sbjct: 453 LSG-AGGSPITPITSLVGTLQNALPVGG---NPA---GALTGAVGTVTGALGSVGSGSGA 505
Query: 154 RA---GALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPP 210
A G + VGT + +G GV+ V A +PA L +G P
Sbjct: 506 LAPVQGVVNQVVGTLGGSNPTGALSGVVGSVTGALGGSNPAGALTGSLGSIGA------P 559
Query: 211 AEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTP 270
Q+ + L+SP+G + G ++ A + ++ + ++ T T
Sbjct: 560 VSQV--VGSLTSPVGGGSVGVGQVGGAVSGAVAAGGSLLGSVSNVVNSTVSNTAGAVGTV 617
Query: 271 LD--GD---TVFALATG-AVAVPPEAGVPAA--LSPETQLVTAVGAA 309
++ G+ TV G +V+ G L+P T L+T + A
Sbjct: 618 VNAVGNAAGTVIGTVPGVSVSTTRSNGTTTIQPLAPVTSLITNLTGA 664
Score = 104 (41.7 bits), Expect = 0.043, P = 0.042
Identities = 66/229 (28%), Positives = 85/229 (37%)
Query: 127 TADFGYSACAAA--GV-DVAVGTVG-VGVGARAGALKGGVGTASATLQSGVTVGVL-AVV 181
T G ++ A A GV G +G VG GAL G V T + TL S G L VV
Sbjct: 277 TGTLGSNSPAGALNGVVGTVTGALGNVGGSDPTGALSGVVNTVTGTLGSNSPTGALNGVV 336
Query: 182 NAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
+ A+G +D G AL L +SP GA N T G +
Sbjct: 337 GTVTGALGNASG----SDPTG--ALSGVVNTVTGTLGS-NSPAGALNGVVGTVTGALGNA 389
Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPE-- 299
P + G + P L+G V TGA+ G L+P
Sbjct: 390 GGSDPTGALSGVVNTVTGTLGSNSPTGA-LNG--VVGTVTGALG--NAGGASNLLAPVQG 444
Query: 300 --TQLVTAV-GAAAADCLARAVLAGVL-NAQPVAGIPTYRDMFPGAFGS 344
TQ+V+ + GA + L G L NA PV G P GA G+
Sbjct: 445 TVTQVVSTLSGAGGSPITPITSLVGTLQNALPVGGNPA--GALTGAVGT 491
Score = 99 (39.9 bits), Expect = 0.15, P = 0.14
Identities = 86/322 (26%), Positives = 118/322 (36%)
Query: 18 LDPDASLGA-GWACG-VTVVLP-----PPGTVGAV--DCRGGAPGTRE-TDLLDPANSVR 67
L P S+GA + G VT LP P T+ A G P + + ++ NSV
Sbjct: 57 LTPTTSIGATASSSGEVTTTLPGALGTPTDTLVATVQSVTGNTPASSAVSQVIGTVNSVN 116
Query: 68 FVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPT 127
V + G A G + G L + V VV V G+ G N T
Sbjct: 117 PVGTVASTAGGALG--SIGGGSNALASVQGTVGQ---VVGTVSGSDPSGALSGALNT-VT 170
Query: 128 ADFGYSACAAAGVDVAVGTVGVGVGAR--AGALKGGVGTASATLQSGVTVGVLAVVNAAG 185
G S A ++ VGTV +G GAL G +GTA+ L + VG +A
Sbjct: 171 GALGGSGNATGALNGVVGTVTGALGNNNPTGALNGVIGTATGALGN---VGGSDPTSALS 227
Query: 186 NVVDPATGLPWMADLVGEFALRAPPAEQIAALAQL--SSPLGAFNTPFNTTIGVIACDAA 243
VV+ TG G AL AL + S P A + NT G + +
Sbjct: 228 GVVNTVTGTLGSNSPAG--ALNGVVGTVTGALGNVGGSDPTSALSGVVNTVTGTLGSN-- 283
Query: 244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
SPA + G + + V TG + G AL+ V
Sbjct: 284 -SPAGALNGVVGTVTGALGNVGGSDPTGALSGVVNTVTGTLGSNSPTG---ALNGVVGTV 339
Query: 304 T-AVGAAAADCLARAVLAGVLN 324
T A+G A+ A L+GV+N
Sbjct: 340 TGALGNASGSDPTGA-LSGVVN 360
^ = sptrembl|O13028|O13028 Antifreeze glycopeptide AFGP polyprotein
precursor.//:trembl|U43200|BSU43200_1 product: "antifreeze
glycopeptide AFGP polyprotein precursor"; Boreogadus saida
antifreeze glycopeptide AFGP polyprotein precursor gene, complete
cds. //:pironly|T44768|T44768 antifreeze glycopeptide AFGP
polyprotein precursor [imported] - Boreogadus
saida//:gp|U43200|2078483 antifreeze glycopeptide AFGP polyprotein
precursor [Boreogadus saida]
Length = 507
0 110 220 330 440
| | | | | |507
sptrembl|O13028|O1302 | __________________________________________________
Local hits (HSPs) | _________________________________________
Score = 104 (41.7 bits), Expect = 0.030, P = 0.029
Identities = 59/213 (27%), Positives = 67/213 (31%)
Query: 136 AAAGVDVAVGTVGVGVGARAGALKGGVGTAS--ATLQSGVTVGVLAVVNAAGNVVDPATG 193
A A T A A TA+ AT + T A A PAT
Sbjct: 135 ATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPATA 194
Query: 194 LPWMADLVGEFALRAPPAEQIAA---LAQLSSPLGAFNTPFNTTIGVIACDAALSPAACR 250
A A A A A+ ++P A TP A AA +P A
Sbjct: 195 ATAATAATAATAATAATAATAATPARAARAATPATA-PTPATAATPATAATAATAPTAAT 253
Query: 251 --RIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV----PPEAGVPA----ALSPET 300
R A AA A T+ A TP T AT A A P A PA A +P T
Sbjct: 254 PARAARAATPATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPAT 313
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
A A AA A A A A T
Sbjct: 314 PATAATAATAATAATAATPARAARAATPATAAT 346
Score = 99 (39.9 bits), Expect = 0.11, P = 0.10
Identities = 62/213 (29%), Positives = 68/213 (31%)
Query: 125 RPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNA- 183
RP A + A A T A A T AT + T A A
Sbjct: 27 RPAAAARAATPATAATPATAATPATAATAATEATAATAATP-ATAATPATAATAATTAAT 85
Query: 184 AGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT-TIGVIACDA 242
A AT P A A A PA AA A ++ TP T A A
Sbjct: 86 AATAATAAT--PARAARAATPATAATPAT--AATAATAATAATAETPARAATPATAATPA 141
Query: 243 -ALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA-ALSPET 300
A +PA A AA A T A TP T AT A A A PA A + T
Sbjct: 142 TAATPATAATAATAATSATAATAARAATPATAATPATPATAARAA--RAATPATAATAAT 199
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
A A AA A A A A PT
Sbjct: 200 AATAATAATAATAATAATPARAARAATPATAPT 232
Score = 90 (36.7 bits), Expect = 1.0, P = 0.65
Identities = 57/216 (26%), Positives = 64/216 (29%)
Query: 134 ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATG 193
A AA A A A + +ATL + T A A AT
Sbjct: 234 ATAATPATAATAATAPTAATPARAARAATPATAATLATAATPATPATPATAATDATAATA 293
Query: 194 L-PWMADLVGEFALRAPPAEQIAAL--------AQLSSPLGAFN--TPFNTTIGVIACDA 242
P A A A PA A A ++P A TP A A
Sbjct: 294 ATPARAATPATPATAATPATPATAATAATAATAATAATPARAARAATPATAATPATAATA 353
Query: 243 ALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP----EAGVPAA-LS 297
A + A A AR PA T T AT A A P A PA +
Sbjct: 354 ATAATAATAATAATPARAARAATPA-TAATAATAATAATAATAATPARAARAATPATPAT 412
Query: 298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
P T A A AA A A A A PT
Sbjct: 413 PATPATPATAATAATAATAATAATAATAATAATAPT 448
^ = trembl|K03506|BTELC_1 Bovine elastin c mRNA, complete cds.
//:gp|K03506|163028 elastin c precursor [Bos taurus]
Length = 713
0 150 300 450 600
| | | | | |713
trembl|K03506|BTELC_1 | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 104 (41.7 bits), Expect = 0.047, P = 0.046
Identities = 77/296 (26%), Positives = 101/296 (34%)
Query: 22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
A +GAG + V+P PG + + GG PG + A + A G
Sbjct: 413 AKIGAGGVGALGGVVPGAPGAIPGLPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 469
Query: 81 GLAAADGVMRWLEEHRRGVAMDSGVVPIV---PGAVI-FDLPVGGWNCRPTA---DFGYS 133
G+A GV+ + GV GV P + PG VI +P + A F +
Sbjct: 470 GVAPGVGVVPGV-----GVVPGVGVAPGIGLGPGGVIGAGVPAAAKSAAKAAAKAQFRAA 524
Query: 134 ACAAAGVD---VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV------VNAA 184
A AGV V G G+GVGA L G G G A V A
Sbjct: 525 AGLPAGVPGLGVGAGVPGLGVGAGVPGLGVGAGVPGPGAVPGTLAAAKAAKFGPGGVGAL 584
Query: 185 GNVVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLS-SPLGAFNTP-FNTTIGVIACD 241
G V D G+P + G A A+ A AQ +G G +
Sbjct: 585 GGVGDLGGAGIP--GGVAGVVPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGL- 641
Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHT-PLDGDTVFALATGAVAVPPEAGVPAAL 296
+SPAA + A GL + P+ G L G P G AL
Sbjct: 642 GGVSPAAAAKAAKFGAAGLGGVLGAGQPFPIGGGAG-GLGVGGKPPKPFGGALGAL 696
Score = 100 (40.3 bits), Expect = 0.13, P = 0.12
Identities = 98/342 (28%), Positives = 117/342 (34%)
Query: 8 GGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVR 67
GG+ G R P + G G V P VGA G PG P +
Sbjct: 161 GGVLPGAGARF-PGIGVLPGVPTGAGV--KPKAQVGA-GAFAGIPGVGPFGGQQPGLPLG 216
Query: 68 F-VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV----VPIVPGAVIFDLPVGGW 122
+ + A L G AAA L GV GV +P PGA+ + G
Sbjct: 217 YPIKAPKLPGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGPGIPGAPGAIPGIGGIAGV 276
Query: 123 NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS-GVT-VGVLAV 180
A +A AA A G GVGV G GVG + GV VGV V
Sbjct: 277 GAPDAAAAAAAAAKAAKFGAAGGLPGVGV---PGVGVPGVGVPGVGVPGVGVPGVGVPGV 333
Query: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
G V P G+P VG + P A AA A+ ++ F IG I
Sbjct: 334 -GVPGVGV-PGVGVPG----VGVPGVGVPGALSPAATAKAAAKAAKFGARGAVGIGGIPT 387
Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALS--P 298
L P I AA A + A G V AL G V VP G P A+ P
Sbjct: 388 -FGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGG--VGAL--GGV-VP---GAPGAIPGLP 438
Query: 299 ETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPG 340
V VG AA A A P G+ + PG
Sbjct: 439 GVGGVPGVGIPAAAAAKAAAKAAQFGLGPGVGVAPGVGVVPG 480
^ = swissnew|P04985|ELS_BOVIN Elastin precursor
(Tropoelastin).//:swiss|P04985|ELS_BOVIN Elastin precursor
(Tropoelastin).//:trembl|J02717|BTELA_1 Bovine elastin a mRNA,
complete cds. //:gp|J02717|163020 elastin a precursor [Bos taurus]
Length = 747
0 150 300 450 600
| | | | | |747
swissnew|P04985|ELS_B | __________________________________________________
Local hits (HSPs) | ______________________________________
Score = 104 (41.7 bits), Expect = 0.049, P = 0.048
Identities = 77/296 (26%), Positives = 101/296 (34%)
Query: 22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
A +GAG + V+P PG + + GG PG + A + A G
Sbjct: 447 AKIGAGGVGALGGVVPGAPGAIPGLPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 503
Query: 81 GLAAADGVMRWLEEHRRGVAMDSGVVPIV---PGAVI-FDLPVGGWNCRPTA---DFGYS 133
G+A GV+ + GV GV P + PG VI +P + A F +
Sbjct: 504 GVAPGVGVVPGV-----GVVPGVGVAPGIGLGPGGVIGAGVPAAAKSAAKAAAKAQFRAA 558
Query: 134 ACAAAGVD---VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV------VNAA 184
A AGV V G G+GVGA L G G G A V A
Sbjct: 559 AGLPAGVPGLGVGAGVPGLGVGAGVPGLGVGAGVPGPGAVPGTLAAAKAAKFGPGGVGAL 618
Query: 185 GNVVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLS-SPLGAFNTP-FNTTIGVIACD 241
G V D G+P + G A A+ A AQ +G G +
Sbjct: 619 GGVGDLGGAGIP--GGVAGVVPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGL- 675
Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHT-PLDGDTVFALATGAVAVPPEAGVPAAL 296
+SPAA + A GL + P+ G L G P G AL
Sbjct: 676 GGVSPAAAAKAAKFGAAGLGGVLGAGQPFPIGGGAG-GLGVGGKPPKPFGGALGAL 730
Score = 90 (36.7 bits), Expect = 1.7, P = 0.82
Identities = 73/247 (29%), Positives = 88/247 (35%)
Query: 98 GVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGA 157
GV + +P PGA+ + G A +A AA A G GVGV G
Sbjct: 286 GVGVGGPGIPGAPGAIPGIGGIAGVGAPDAAAAAAAAAKAAKFGAAGGLPGVGV---PGV 342
Query: 158 LKGGVGTASATLQS-GVT-VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIA 215
GVG + GV VGV V G V P G+P VG + P A A
Sbjct: 343 GVPGVGVPGVGVPGVGVPGVGVPGV-GVPGVGV-PGVGVPG----VGVPGVGVPGALSPA 396
Query: 216 ALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDT 275
A A+ ++ F IG I L P I AA A + A G
Sbjct: 397 ATAKAAAKAAKFGARGAVGIGGIPT-FGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGG-- 453
Query: 276 VFALATGAVAVPPEAGVPAALS--PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
V AL G V VP G P A+ P V VG AA A A P G+
Sbjct: 454 VGAL--GGV-VP---GAPGAIPGLPGVGGVPGVGIPAAAAAKAAAKAAQFGLGPGVGVAP 507
Query: 334 YRDMFPG 340
+ PG
Sbjct: 508 GVGVVPG 514
Score = 86 (35.3 bits), Expect = 4.6, P = 0.99
Identities = 82/337 (24%), Positives = 111/337 (32%)
Query: 8 GGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVR 67
GG+ G R P + G G V P VGA G PG P +
Sbjct: 161 GGVLPGAGARF-PGIGVLPGVPTGAGV--KPKAQVGA-GAFAGIPGVGPFGGQQPGLPLG 216
Query: 68 F-VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRP 126
+ + A L G YGL G + + GVA +G G + +
Sbjct: 217 YPIKAPKLPAG--YGLPYKTGKLPY-GFGPGGVAGSAGKAGYPTGTGVGPQAAAA-AAKA 272
Query: 127 TADFGYSACAAAGVDVAVGTVGVGVGARAGALKG-----GVGTASATLQSGVTVGVLAVV 181
A G AGV VG G G+ GA+ G GVG A + A
Sbjct: 273 AAKLG---AGGAGVLPGVGVGGPGIPGAPGAIPGIGGIAGVGAPDAAAAAAAAAKA-AKF 328
Query: 182 NAAGNVVDPATGLPWMA-DLVGEFALRAP----PAEQIAALAQLSSPLGAFNTPFNTTIG 236
AAG + P G+P + VG + P P + + + P G
Sbjct: 329 GAAGGL--PGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPG 386
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV-AVPPEAGVPAA 295
V ALSPAA + A A AR + G F L G + A PAA
Sbjct: 387 V-GVPGALSPAATAKAAAKAAKFGAR----GAVGIGGIPTFGLGPGGFPGIGDAAAAPAA 441
Query: 296 LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
+ + + A G A + + V G+P
Sbjct: 442 AAAKAAKIGAGGVGALGGVVPGAPGAIPGLPGVGGVP 478
^ = swissnew|O06250|YY33_MYCTU Hypothetical protein
Rv3433c.//:swiss|O06250|YY33_MYCTU Hypothetical protein
Rv3433c.//:trembl|AE007158|AE007158_17 gene: "MT3539"; product:
"YjeF family protein"; Mycobacterium tuberculosis CDC1551,
section 244 of 280 of the complete genome.
//:trembl|Z95389|MTCY77_5 gene: "Rv3433c"; product: "hypothetical
protein Rv3433c"; Mycobacterium tuberculosis H37Rv complete
genome; segment 146/162 //:pironly|G70975|G70975 hypothetical
protein Rv3433c - Mycobacterium tuberculosis (strain
H37RV)//:gp|Z95389|2104354 hypothetical protein Rv3433c
[Mycobacterium tuberculosis H37Rv]//:gp|AE007158|13883370 YjeF
family protein [Mycobacterium tuberculosis CDC1551]
Length = 473
0 100 200 300 400
| | | | | |473
swissnew|O06250|YY33_ | __________________________________________________
Local hits (HSPs) | ______________________ ______
Score = 88 (36.0 bits), Expect = 0.070, Sum P(2) = 0.068
Identities = 67/225 (29%), Positives = 94/225 (41%)
Query: 83 AAADGVMRWLEE-HRRGVAM--DSG--VVPIVPGA--VIFDLPVG--GWN-CRPTADFGY 132
AAAD V+ + HR+ +A SG +V V A ++ D VG G RP A +
Sbjct: 79 AAADAVLLNPDRTHRKALAAFTKSGGRLVESVSAATDLVIDGVVGISGSGPLRPAAAQVF 138
Query: 133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPAT 192
+A AA + V + G+ GA+ G A+ T+ G V A+ + G VV
Sbjct: 139 AAVQAAAIPVVAVDIPSGIDVATGAITGPAVHAALTVTFGGLKPVHALADC-GRVVLVDI 197
Query: 193 GLPWM-ADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAA--C 249
GL D++G F A +AA + P T T GV+A + AA C
Sbjct: 198 GLDLAHTDVLG-FE-----ATDVAARWPVPGPRDDKYTQGVT--GVLAGSSTYPGAAVLC 249
Query: 250 RRIAIAAHDGLARTIRPAHTPL--DGDTVFALATGAVAVPPEAGV 292
A+AA G+ R AH + V A T A A +A V
Sbjct: 250 TGAAVAATSGMVRYAGTAHAEVLAHWPEVIASPTPAAAGRVQAWV 294
Score = 54 (24.1 bits), Expect = 0.070, Sum P(2) = 0.068
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 273 GDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
G TV L G V V + G P L+P Q A A + D VL+G++ A +G+P
Sbjct: 376 GATV--LLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLASGLP 427
Query: 333 TYRDMFPGAF 342
+ AF
Sbjct: 428 SGEAAAAAAF 437
^ = sptrembl|Q28099|Q28099 Elastin-cBEL1 (Fragment).//:trembl|M19372|BTEG8_4
Bovine elastin gene, exon 1. //:gp|M19372|163003 elastin-cBEL1 [Bos
taurus]
Length = 650
0 130 260 390 520 650
| | | | | |650
sptrembl|Q28099|Q2809 | __________________________________________________
Local hits (HSPs) | ___________________________________
Score = 101 (40.6 bits), Expect = 0.089, P = 0.085
Identities = 95/340 (27%), Positives = 115/340 (33%)
Query: 8 GGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVR 67
GG+ G R P + G G V PG GA G PG P +
Sbjct: 106 GGVLPGAGARF-PGIGVLPGVPTGAGVKPKAPGGGGAF---AGIPGVGPFGGQQPGVPLG 161
Query: 68 F-VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV----VPIVPGAVIFDLPVGGW 122
+ + A L G AAA L GV GV +P PGA+ + G
Sbjct: 162 YPIKAPKLPGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGAGIPGAPGAIPGIGGIAGV 221
Query: 123 NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS-GVT-VGVLAV 180
A +A AA A G GVGV G GVG + GV VGV V
Sbjct: 222 GAPDAAAAAAAAAKAAKFGAAGGFPGVGV---PGVGVPGVGVPGVGVPGVGVPGVGVPGV 278
Query: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
G V P G+P VG + P A AA A+ ++ F IG I
Sbjct: 279 -GVPGVGV-PGVGVPG----VGVPGVGVPGAVSPAAAAKAAAKAAKFGARGGVGIGGIPT 332
Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
+ P I AA A + A G V AL G V P A +P P
Sbjct: 333 -FGVGPGGFPGIGDAAAAQAAAAAKAAKIGAGG--VGALG-GLVPGAPGA-IPGV--PGV 385
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPG 340
V VG AA A A P G+ + PG
Sbjct: 386 GGVPGVGIPAAAAAKAAAKAAQFGLGPGVGVAPGVGVVPG 425
Score = 91 (37.1 bits), Expect = 1.1, P = 0.67
Identities = 64/222 (28%), Positives = 85/222 (38%)
Query: 22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
A +GAG + ++P PG + V GG PG + A + A G
Sbjct: 358 AKIGAGGVGALGGLVPGAPGAIPGVPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 414
Query: 81 GLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVI-FDLPVGGWNCRPTADFGYSACAAAG 139
G+A GV+ + GV + G+ + PG VI +P + A AAAG
Sbjct: 415 GVAPGVGVVPGVGVVP-GVGVAPGI-GLGPGGVIGAGVPAAAKSAAKAAAKAQFR-AAAG 471
Query: 140 VDVAVGTVGVGVGARA-GALKG--GVGTASATLQSGVTVGVLAVVNAA----------GN 186
+ V +GVGVG G G G+G + G G LA AA G
Sbjct: 472 LPAGVPGLGVGVGVPGLGVGVGVPGLGVGAGVPGFGAVPGTLAAAKAAKFGPGGVGALGG 531
Query: 187 VVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLS-SPLGA 226
V D G+P VG A A A+ A AQ SP A
Sbjct: 532 VGDLGGAGIPGGVAGVGPAAAAA--AKAAAKAAQFGVSPAAA 571
^ = sptremblnew|AAO35473|AAO35473 Conserved
protein.//:tremblnew|AE015939|AE015939_22 gene: "CTC00879";
product: "conserved protein"; Clostridium tetani E88, section 4 of
10 of the complete genome. //:gp|AE015939|28203030 conserved
protein [Clostridium tetani E88]
Length = 103
0 20 40 60 80 100
| | | | | | |103
sptremblnew|AAO35473| | __________________________________________________
Local hits (HSPs) | ______ _______________________
Score = 70 (29.7 bits), Expect = 0.11, Sum P(2) = 0.10
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
G++ D + + R A++ +T+ AH+ DGDT+F L T V
Sbjct: 23 GIVLYDLDIGMSNIRPNKSMAYNTYGKTMNLAHSMFDGDTIFTLGTNKV 71
Score = 40 (19.1 bits), Expect = 0.11, Sum P(2) = 0.10
Identities = 6/12 (50%), Positives = 10/12 (83%)
Query: 3 SITDVGGIRVGH 14
SI+ + GI++GH
Sbjct: 5 SISSIDGIKIGH 16
^ = sptrembl|Q94HY7|Q94HY7 Hypothetical 20.3 kDa
protein.//:trembl|AC025296|AC025296_13 gene: "OSJNBa0076F20.23";
product: "hypothetical protein"; Oryza sativa chromosome 10 BAC
OSJNBa0076F20 genomic sequence, complete sequence.
//:gp|AC025296|13786457 hypothetical protein [Oryza sativa] [Oryza
sativa (japonica cultivar-group)]
Length = 198
0 40 80 120 160
| | | | | |198
sptrembl|Q94HY7|Q94HY | __________________________________________________
Local hits (HSPs) | ________________________________
Score = 92 (37.4 bits), Expect = 0.12, P = 0.11
Identities = 44/138 (31%), Positives = 57/138 (41%)
Query: 150 GVGARAGALKGGVG---TASATLQSGVTVGVLAVVNAAGNVVDPATGL----PW-MADLV 201
G G RA G G TA+A ++G GVLA AA L PW +A +
Sbjct: 44 GEGGRAAVRARGEGVRATAAAAARAGGGEGVLAAAAAAATACGRRRRLLLLLPWPLASTL 103
Query: 202 GEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLA 261
R PP +A ++P+ A + P + V A DAAL P C R A+
Sbjct: 104 RH--RRPPPPPPAPTIAAAAAPV-AGDDPILLDVDVGA-DAALLPVPCSRAAVIVTIAEC 159
Query: 262 RTIRPAHTPLDGDTVFAL 279
IR + DTVF L
Sbjct: 160 IVIR-----IGPDTVFLL 172
^ = sptrembl|Q9L547|Q9L547 AknF.//:trembl|AF257324|AF257324_11 gene: "aknF";
product: "AknF"; Streptomyces galilaeus aclacinomycin biosynthesis
gene cluster, partial sequence. //:gp|AF257324|7800669 AknF
[Streptomyces galilaeus]
Length = 347
0 70 140 210 280
| | | | | |347
sptrembl|Q9L547|Q9L54 | __________________________________________________
Local hits (HSPs) | _______________________________
Score = 96 (38.9 bits), Expect = 0.13, P = 0.12
Identities = 73/234 (31%), Positives = 98/234 (41%)
Query: 94 EHRRGVAMDSGVVPIVPGAV--IFDL--PVGG-----WNC-RPTADFGY---SACAAAGV 140
+HRR A G P+ A+ FD P G W RP D + S V
Sbjct: 20 QHRRMAAGLYGHEPVFTEAMDEFFDAAGPEGDPLRDDWLAERPVTDIDHVTRSQPLLFAV 79
Query: 141 DVAVGTVGVGVGARAGALKG-GVGT-ASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMA 198
D A+G + +G G R AL G +G A+ATL GV A +AAG V+D L A
Sbjct: 80 DHALGRLVLGRGVRPAALLGHSIGELAAATL-----AGVFAPRDAAGLVLDRIRRLS-AA 133
Query: 199 DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI----GVI-ACDAALSPAA--CRR 251
G A+ A AE +A + +GA N P T + G + D AL A CRR
Sbjct: 134 PPGGMLAVAASTAE-VAPYLRGDVVVGAVNAPRQTVLAGPDGPLDEVDRALREAGFVCRR 192
Query: 252 I-AIAA-HDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEAGVPAALSPETQL 302
+ +++A H + PL FA A AVP + AA E+ +
Sbjct: 193 VPSLSAFHSPVLEPACRGAAPL-----FAAACKHPPAVPVHSAYTAAPLTESDI 241
^ = sptrembl|O15336|O15336 Elastin (Fragment).//:trembl|U93037|HSULAST4_1
product: "elastin"; Homo sapiens elastin gene, exons 5-27 and
alternatively spliced products, partial cds. //:gp|U93037|2304982
elastin [Homo sapiens]
Length = 635
0 130 260 390 520
| | | | | |635
sptrembl|O15336|O1533 | __________________________________________________
Local hits (HSPs) | ________________________________
Score = 99 (39.9 bits), Expect = 0.14, P = 0.13
Identities = 93/345 (26%), Positives = 116/345 (33%)
Query: 9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
G VG A A + G VLP G G G PG + PA +
Sbjct: 219 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 278
Query: 68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
A A G+A GL GV+ GV + +P+VPGA I V G
Sbjct: 279 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 338
Query: 122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVG-V 177
A + A G VG G+ G AG G GVG +GV +VG V
Sbjct: 339 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGGV 398
Query: 178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
V G + P A A A + A + P G T +G
Sbjct: 399 PGVGGVPGVGISPEAQAAAAAKAAKYGAAGAGVLGGLVPGAPGAVP-GVPGTGGVPGVGT 457
Query: 238 IACDAALSPAACRRIAIAAHDGLARTI--RPAHTPLDGDTV---FALATGA-----VAVP 287
A AA + A + A+ GL + P G V LA G V V
Sbjct: 458 PAAAAAKAAAKAAQFALLNLAGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA 517
Query: 288 PEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
P GV + P V A +AA A+A L AGIP
Sbjct: 518 PGVGVAPGIGPGG--VAAAAKSAAKVAAKAQLRAAAGLG--AGIP 558
Score = 89 (36.4 bits), Expect = 1.8, P = 0.83
Identities = 69/259 (26%), Positives = 89/259 (34%)
Query: 98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
GV +GV P PG +P VG + +P GY A G+ G +
Sbjct: 140 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 199
Query: 149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
G G G + G G A +G VG A AA G + VG +
Sbjct: 200 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 255
Query: 208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
P A+ + G TP A AA AA + G +
Sbjct: 256 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 306
Query: 268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
P G + + V P AG+P A P +V+ AAA A+A G
Sbjct: 307 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 362
Query: 328 VAGIPTY---RDMFPGAFG 343
V GIPTY FPG FG
Sbjct: 363 VGGIPTYGVGAGGFPG-FG 380
^ = sptrembl|Q9LAX0|Q9LAX0 Hypothetical 127.4 kDa protein
(Fragment).//:trembl|AF083618|AF083618_1 product: "unknown";
Xanthomonas campestris pv. pelargonii putative serine protease
gene, partial cds; and unknown gene. //:gp|AF083618|7542317 unknown
[Xanthomonas campestris pv. pelargonii]
Length = 1328
0 270 540 810 1080
| | | | | |1328
sptrembl|Q9LAX0|Q9LAX | __________________________________________________
Local hits (HSPs) | ___________
Score = 102 (41.0 bits), Expect = 0.16, P = 0.15
Identities = 77/326 (23%), Positives = 120/326 (36%)
Query: 10 IRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFV 69
+ VGH +++ G V V VGA + A L A + R
Sbjct: 544 VAVGHNANATDASAVAVGGVASVPVFDASGSIVGAQEQATLAQARGAVALGSGAVAARTF 603
Query: 70 DALLLAGGSAYG-LAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW-NCRPT 127
+ G A G + A G ++ VA G G+ G N T
Sbjct: 604 ATAVGTGAVASGEQSMASGFSARAQDD---VATAVGAFSTARGSASSAFGFGALANASLT 660
Query: 128 ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG-- 185
G++A + VAVG++ V G R+ + GG+ S+TL+ +GV V AG
Sbjct: 661 TAVGFNASSIGESSVAVGSLAVAAGERSVTV-GGMSLVSSTLRPAGALGVGGVAIGAGAR 719
Query: 186 NVVDPATGLPWMADLVGEFALRAPPA--EQIAALAQLSSPLGAFNTPFNTTIGVIACDAA 243
+ D A L + A++ A A+ A + LG ++ + DA
Sbjct: 720 SDGDYAIALGYNANVFSNDTNTDAVAIGHSAASFAPRTVSLGTLSSSEGAEAIAVGYDAR 779
Query: 244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
+ R IAI + G +I GD + AL T A A P+A A+ + +
Sbjct: 780 A--VSSRSIAIGS--GATTSI------FSGDNI-ALGTNARAEAPDA---IAIGRDASVG 825
Query: 304 TAVGAAAADCLARAVLAGVLNAQPVA 329
+G + +A V + L VA
Sbjct: 826 VFIGETGSAAMALGVQSTALGNNSVA 851
^ = sptrembl|Q8N2G0|Q8N2G0 Hypothetical protein HEMBA1000446
(Fragment).//:trembl|AK075494|AK075494_1 unnamed ORF; Homo sapiens
cDNA PSEC0191 fis, clone HEMBA1000446, moderately similar to
ELASTIN PRECURSOR. //:trembl|AX136289|AX136289_1 unnamed ORF;
Sequence 211 from Patent EP1067182. //:gp|AK075494|22761674 unnamed
protein product [Homo sapiens]//:gp|AX136289|14272696 unnamed
protein product [Homo sapiens]
Length = 472
0 100 200 300 400
| | | | | |472
sptrembl|Q8N2G0|Q8N2G | __________________________________________________
Local hits (HSPs) | ______________________________________
Score = 97 (39.2 bits), Expect = 0.16, P = 0.15
Identities = 66/252 (26%), Positives = 88/252 (34%)
Query: 109 VPGAVIFDLPVGGWNCRPTADFGYSACAAAGVD------VAVGTVGVGVGARAGALKGGV 162
VPGA+ +P G + P A G A G V G G G+GA GAL GGV
Sbjct: 29 VPGAIPGGVPGGVFY--PGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAL-GGV 85
Query: 163 GTASATLQSGVTVGVLAVVNAA--GNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQL 220
G + +G A AA G G P V P +
Sbjct: 86 GIPGGVVGAGPAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 145
Query: 221 SSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAH-TPLDGDTVFAL 279
P GA P GV++ +AA + AA + A G+ P + G F +
Sbjct: 146 VVP-GA-GIPGAAVPGVVSPEAA-AKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 202
Query: 280 ATGAV----AVPPEAGVPAA-------LSPETQLVTAVGAAAADCLARAVLAGVLNAQPV 328
G + VP GVP +SPE Q A AA + +A + P
Sbjct: 203 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 262
Query: 329 AGIPTYRDMFPG 340
G+ + PG
Sbjct: 263 VGVAPGVGLAPG 274
Score = 84 (34.6 bits), Expect = 4.3, P = 0.99
Identities = 48/170 (28%), Positives = 62/170 (36%)
Query: 20 PDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA-NSVRFVDAL-LLAGG 77
P GAG G+ G +G V GG G A + ++ A L+ GG
Sbjct: 67 PGGLAGAGLGAGL-------GALGGVGIPGGVVGAGPAAAAAAAAKAAKYGAAAGLVPGG 119
Query: 78 SAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAA 137
+G GV+ GV + +P+VPGA I V G A + A
Sbjct: 120 PGFG----PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAK 175
Query: 138 AGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGVTVGVLAVVNAAG 185
G VG G+ G AG G GVG +GV GV V G
Sbjct: 176 YGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP-GVGGVPGVGG 224
Score = 84 (34.6 bits), Expect = 4.3, P = 0.99
Identities = 60/202 (29%), Positives = 73/202 (36%)
Query: 20 PDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPG---TRETDLLDPANSVRF--VDALLL 74
P +G G GV V PG VG V GG PG + E A + ++ V + +
Sbjct: 198 PGFGVGVGGIPGVAGV---PG-VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGV 253
Query: 75 A-G-GSAYGLAAADGVMRWLEEHRR---GVAMDSGVVP-IVPGAVIFDLPVGGW-----N 123
A G G A G+ A GV GVA GV P I PG V
Sbjct: 254 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 313
Query: 124 CRPTADFGYS------ACAAAGVDVAVGTVGVGVGARA---GALKGGVGTASATLQSGVT 174
R A G G+ V G G+GVGA GA+ G + A A
Sbjct: 314 LRAAAGLGAGIPGLGVGVGVPGLGVGTGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 373
Query: 175 VGVLAVVNAAGNVVDPATGLPW 196
GVL + A G V L W
Sbjct: 374 PGVLGGLGALGGVGINLVDLSW 395
^ = trembl|U00020|ML020_14 product: "u229g"; Mycobacterium leprae cosmid B229.
//:pironly|S72984|S72984 hypothetical protein B229_C2_201 -
Mycobacterium leprae//:gp|U00020|467116 u229g; match to 39.6 kd
E.coli protein in amiB 5' region (yjeF); B229_C2_201 [Mycobacterium
leprae]
Length = 392
0 80 160 240 320
| | | | | |392
trembl|U00020|ML020_1 | __________________________________________________
Local hits (HSPs) | __________________________ ______
Score = 80 (33.2 bits), Expect = 0.16, Sum P(2) = 0.15
Identities = 62/219 (28%), Positives = 96/219 (43%)
Query: 83 AAADGVMRWLEE-HRRG-VAM-DSG--VVPIVPGA--VIFDLPVG--GWN-CRPTADFGY 132
AAAD V+ + HR+ VA +G +V V A ++ D VG G RP A +
Sbjct: 25 AAADAVLLNPDRVHRKALVAFRKAGGRIVENVSAATDLVIDGVVGISGSGPLRPAAAAVF 84
Query: 133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG-NVVDPA 191
+ +A+GV V + G+ G + G A+ T+ G V A+ + +VD
Sbjct: 85 ATVSASGVPVVAVDLPSGIDVVTGVINGPAVHAALTVTFGGLKPVHALADCGDVTLVDIG 144
Query: 192 TGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI-GVIACDAALSPAA-- 248
LP +D++G L+A +AA + P G + + + GV+A + AA
Sbjct: 145 LDLP-DSDILG---LQAA---DVAAYWPV--P-GVHDDKYTQGVTGVLAGSSTYPGAAVL 194
Query: 249 CRRIAIAAHDGLARTIRPAHTPL--DGDTVFALATGAVA 285
C A+AA G+ R A+T + V A AT A
Sbjct: 195 CTGAAVAATSGMVRYAGSAYTQVLAHWPEVIASATPTAA 233
Score = 57 (25.1 bits), Expect = 0.16, Sum P(2) = 0.15
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 273 GDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
G TV L G V V + G P L+P Q A A + D VL+G++ A AG+P
Sbjct: 322 GATV--LLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLAAGLP 373
Query: 333 TYR 335
R
Sbjct: 374 APR 376
^ = sptrembl|Q01916|Q01916 IpiB3 protein precursor.//:trembl|L23936|PIIBIB3A_1
gene: "ipiB3"; Phytophthora infestans ipiB3 gene, complete cds.
//:gp|L23936|397689 ipiB3 [Phytophthora infestans]
Length = 347
0 70 140 210 280
| | | | | |347
sptrembl|Q01916|Q0191 | __________________________________________________
Local hits (HSPs) | ________________________
Score = 95 (38.5 bits), Expect = 0.17, P = 0.16
Identities = 42/126 (33%), Positives = 49/126 (38%)
Query: 69 VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTA 128
V A L G+AYG A A R G + +GV P G + VGG T
Sbjct: 146 VGAGLYGRGAAYGGAGAGLFGREAGFGGAGAGVAAGVGPAGLGNAYGGVGVGG-----TT 200
Query: 129 DFGYSACAAAGVDVAVGT-VGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNV 187
G A GV VG VGVG A GA GG + +GV GV N V
Sbjct: 201 GVGAGAGVGGGVSGNVGAGVGVGGNAAVGAGVGGAANGGVSANAGVGAGVSG--NTGAGV 258
Query: 188 VDPATG 193
A+G
Sbjct: 259 GGGASG 264
Score = 89 (36.4 bits), Expect = 0.79, P = 0.54
Identities = 61/179 (34%), Positives = 72/179 (40%)
Query: 22 ASLGAGWA-CGVTVVLPPPGTVGA-VDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSA 79
A L AG+ G + G VGA + RG A G L A + AG
Sbjct: 125 AGLYAGYGGAGAGLYGRGAGGVGAGLYGRGAAYGGAGAGLFGREAGFGGAGAGVAAGVGP 184
Query: 80 YGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSA----C 135
GL A G + GV +GV V G V + VGG N A G +A
Sbjct: 185 AGLGNAYGGVG--VGGTTGVGAGAGVGGGVSGNVGAGVGVGG-NAAVGAGVGGAANGGVS 241
Query: 136 AAAGVDVAV-GTVGVGVGARA-GALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPAT 192
A AGV V G G GVG A G GGV +A+A + GV G V AA V AT
Sbjct: 242 ANAGVGAGVSGNTGAGVGGGASGGANGGV-SANAGVGGGVG-GSAGVGGAASTGVGGAT 298
^ = sptrembl|Q9GUB4|Q9GUB4 Heavy-chain fibroin
(Fragment).//:trembl|AF095240|AF095240_1 gene: "Fib-H"; product:
"heavy-chain fibroin"; Galleria mellonella heavy-chain fibroin
(Fib-H) gene, 3' partial cds. //:gp|AF095240|9971735 heavy-chain
fibroin [Galleria mellonella]
Length = 443
0 90 180 270 360
| | | | | |443
sptrembl|Q9GUB4|Q9GUB | __________________________________________________
Local hits (HSPs) | __________________________________
Score = 96 (38.9 bits), Expect = 0.19, P = 0.17
Identities = 86/323 (26%), Positives = 129/323 (39%)
Query: 7 VGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSV 66
VGG+ +G L +GA A L GT GA GG G + +
Sbjct: 137 VGGLGLGSLGPLGGIGQIGASSAGASGAGLGGVGTAGASGL-GGLGGAGRSSAGSTGAGL 195
Query: 67 RFVDALLLAGGSAYGLAAAD----GVMRWLEEHRRGV---AMDSGVV-PIVPGAVIFDLP 118
V A +G SA LAA+ G + +++ A SG P PG + P
Sbjct: 196 GGVGAGGSSGSSA-ALAASGTSGAGEVIVIDDRSSAASAAAASSGASGPGGPGLGAWG-P 253
Query: 119 VGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL 178
+GG+ P G S+ +A+G +G VG + G L GGVG ASA +G +G +
Sbjct: 254 LGGFG--P---IGASSGSASGA--GLGGVGAAGTSGLGGL-GGVG-ASAGGSAGAGLGGI 304
Query: 179 AVVNAAGNVVDPATGLPWMADLVGEFAL---RAPPAEQIAALAQLSSP----LGAFNTPF 231
V ++G+ PA+ A GE + R+ A AA + S P LG P+
Sbjct: 305 GAVGSSGS--SPASAASG-ASGAGEVIVIDDRSSAASAAAAGSGASGPGGLGLGGLG-PY 360
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDG-DTVFALATGAVAVPPEA 290
IG AA +P ++ G A+ I + +++ +V+ P
Sbjct: 361 GG-IGPNVVSAASAPVVGPSVSSVGPVG-AQVIEIGSPVVPSVSRTGSVSRVSVSGRPGV 418
Query: 291 GVPAALSPETQLVTAVGAAAADC 313
VP +L+ Q V +G C
Sbjct: 419 RVPCSLT-RRQFVVKIGTRRQPC 440
^ = swissnew|P37391|YY33_MYCLE Hypothetical protein
ML0373.//:swiss|P37391|YY33_MYCLE Hypothetical protein
ML0373.//:trembl|AL583918|MLEPRTN2_110 gene: "ML0373"; product:
"conserved hypothetical protein"; Mycobacterium leprae strain TN
complete genome; segment 2/10 //:pironly|E86955|E86955 conserved
hypothetical protein ML0373 [imported] - Mycobacterium
leprae//:gp|AL583918|13092651 conserved hypothetical protein
[Mycobacterium leprae]
Length = 473
0 100 200 300 400
| | | | | |473
swissnew|P37391|YY33_ | __________________________________________________
Local hits (HSPs) | _________________________ ______
Score = 81 (33.6 bits), Expect = 0.20, Sum P(2) = 0.18
Identities = 70/253 (27%), Positives = 108/253 (42%)
Query: 49 GGAPGTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEE-HRRG-VAM-DSG- 104
GG G R ++ ++ DAL A AAAD V+ + HR+ VA +G
Sbjct: 47 GGVTGRRVCAVVGSGDNGG--DALWAATFLRRRGAAADAVLLNPDRVHRKALVAFRKAGG 104
Query: 105 -VVPIVPGA--VIFDLPVG--GWN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGAL 158
+V V A ++ D VG G RP A ++ +A+GV V + G+ G +
Sbjct: 105 RIVENVSAATDLVIDGVVGISGSGPLRPAAAAVFATVSASGVPVVAVDLPSGIDVVTGVI 164
Query: 159 KGGVGTASATLQSGVTVGVLAVVNAAG-NVVDPATGLPWMADLVGEFALRAPPAEQIAAL 217
G A+ T+ G V A+ + +VD LP +D++G L+A +AA
Sbjct: 165 NGPAVHAALTVTFGGLKPVHALADCGDVTLVDIGLDLP-DSDILG---LQAA---DVAAY 217
Query: 218 AQLSSPLGAFNTPFNTTI-GVIACDAALSPAA--CRRIAIAAHDGLARTIRPAHTPL--D 272
+ P G + + + GV+A + AA C A+AA G+ R A+T +
Sbjct: 218 WPV--P-GVHDDKYTQGVTGVLAGSSTYPGAAVLCTGAAVAATSGMVRYAGSAYTQVLAH 274
Query: 273 GDTVFALATGAVA 285
V A AT A
Sbjct: 275 WPEVIASATPTAA 287
Score = 57 (25.1 bits), Expect = 0.20, Sum P(2) = 0.18
Identities = 24/70 (34%), Positives = 31/70 (44%)
Query: 273 GDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
G TV L G V V + G P L+P Q A A + D VL+G++ A AG+P
Sbjct: 376 GATV--LLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLAAGLP 427
Query: 333 TYRDMFPGAF 342
AF
Sbjct: 428 AAEAAAAAAF 437
^ = swissnew|P15502|ELS_HUMAN Elastin precursor
(Tropoelastin).//:swiss|P15502|ELS_HUMAN Elastin precursor
(Tropoelastin).//:trembl|M36860|HSELASF_1 gene: "ELN"; Human
elastin mRNA, complete cds. //:gp|M36860|182062 elastin precursor
[Homo sapiens]
Length = 730
0 150 300 450 600
| | | | | |730
swissnew|P15502|ELS_H | __________________________________________________
Local hits (HSPs) | ___________________________
Score = 98 (39.6 bits), Expect = 0.22, P = 0.20
Identities = 87/336 (25%), Positives = 119/336 (35%)
Query: 9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
G VG A A + G VLP G G G PG + PA +
Sbjct: 247 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 306
Query: 68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
A A G+A GL GV+ GV + +P+VPGA I V G
Sbjct: 307 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 366
Query: 122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVG-V 177
A + A G VG G+ G AG G GVG +GV +VG V
Sbjct: 367 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGGV 426
Query: 178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
V G + P A ++ + P A A A+ ++ N GV
Sbjct: 427 PGVGGVPGVGISPEAQAAAAAK-AAKYGVGTPAAAAAKAAAK-AAQFALLNLA-GLVPGV 483
Query: 238 -IACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAAL 296
+A ++P + +A GLA + A P G +A G V V P G P +
Sbjct: 484 GVAPGVGVAPG----VGVAPGVGLAPGVGVA--PGVG-----VAPG-VGVAPGIG-PGGV 530
Query: 297 SPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
+ + V A A A + AG+ G+P
Sbjct: 531 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVP 566
Score = 89 (36.4 bits), Expect = 2.1, P = 0.88
Identities = 69/259 (26%), Positives = 89/259 (34%)
Query: 98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
GV +GV P PG +P VG + +P GY A G+ G +
Sbjct: 168 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 227
Query: 149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
G G G + G G A +G VG A AA G + VG +
Sbjct: 228 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283
Query: 208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
P A+ + G TP A AA AA + G +
Sbjct: 284 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 334
Query: 268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
P G + + V P AG+P A P +V+ AAA A+A G
Sbjct: 335 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 390
Query: 328 VAGIPTY---RDMFPGAFG 343
V GIPTY FPG FG
Sbjct: 391 VGGIPTYGVGAGGFPG-FG 408
^ = sptrembl|Q8DS95|Q8DS95 Hypothetical protein.//:trembl|AE015016|AE015016_9
gene: "SMU.1914c"; product: "hypothetical protein"; Streptococcus
mutans UA159 section 164 of 185 of the complete genome.
//:gp|AE015016|24378275 hypothetical protein [Streptococcus mutans
UA159]
Length = 76
0 20 40 60
| | | | |76
sptrembl|Q8DS95|Q8DS9 | __________________________________________________
Local hits (HSPs) | _____________________________
Score = 72 (30.4 bits), Expect = 0.24, P = 0.22
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 121 GWNCRP--TADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTA 165
GWNC G A AG +G +G GA GA+ GG+G A
Sbjct: 26 GWNCAAGIALGAGQGYMATAGGTAFLGPYAIGTGA-FGAIAGGIGGA 71
^ = sptrembl|Q28098|Q28098 Elastin (Fragment).//:trembl|M19372|BTEG8_3 Bovine
elastin gene, exon 1. //:gp|M19372|163002 elastin [Bos taurus]
Length = 707
0 150 300 450 600
| | | | | |707
sptrembl|Q28098|Q2809 | __________________________________________________
Local hits (HSPs) | _________________________________________
Score = 97 (39.2 bits), Expect = 0.27, P = 0.24
Identities = 72/269 (26%), Positives = 97/269 (36%)
Query: 22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
A +GAG + ++P PG + V GG PG + A + A G
Sbjct: 392 AKIGAGGVGALGGLVPGAPGAIPGVPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 448
Query: 81 GLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVI-FDLPVGGWNCRPTADFGYSACAAAG 139
G+A GV+ + GV + G+ + PG VI +P + A AAAG
Sbjct: 449 GVAPGVGVVPGVGVVP-GVGVAPGI-GLGPGGVIGAGVPAAAKSAAKAAAKAQFR-AAAG 505
Query: 140 VDVAVGTVGVGVGARA-GALKG--GVGTASATLQSGVTVGVLAVVNAA----------GN 186
+ V +GVGVG G G G+G + G G LA AA G
Sbjct: 506 LPAGVPGLGVGVGVPGLGVGVGVPGLGVGAGVPGFGAVPGTLAAAKAAKFGPGGVGALGG 565
Query: 187 VVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALS 245
V D G+P VG A A A AA L G G + +S
Sbjct: 566 VGDLGGAGIPGGVAGVGPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGL-GGVS 624
Query: 246 PAACRRIAIAAHDGLARTIRPAHT-PLDG 273
PAA + A GL + P+ G
Sbjct: 625 PAAAAKAAKFGAAGLGGVLGAGQPFPIGG 653
Score = 91 (37.1 bits), Expect = 1.2, P = 0.71
Identities = 72/275 (26%), Positives = 93/275 (33%)
Query: 75 AGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSA 134
AG + Y G + + +G ++PG + + G P A G
Sbjct: 195 AGKAGYPTGTGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGAGIPG---APGAIPGIGG 251
Query: 135 CAAAGV-DVAVGTVGVGVGARAGALKG--GVGTASATLQS-GVT-VGVLAV-VNAAG--N 186
A G D A A+ GA G GVG + GV VGV V V G
Sbjct: 252 IAGVGAPDAAAAAAAAAKAAKFGAAGGFPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPG 311
Query: 187 VVDPATGLPWMA-DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALS 245
V P G+P + VG + P A AA A+ ++ F IG I +
Sbjct: 312 VGVPGVGVPGVGVPGVGVPGVGVPGAVSPAAAAKAAAKAAKFGARGGVGIGGIPT-FGVG 370
Query: 246 PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTA 305
P I AA A + A G V AL G V P A +P P V
Sbjct: 371 PGGFPGIGDAAAAQAAAAAKAAKIGAGG--VGALG-GLVPGAPGA-IPGV--PGVGGVPG 424
Query: 306 VGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPG 340
VG AA A A P G+ + PG
Sbjct: 425 VGIPAAAAAKAAAKAAQFGLGPGVGVAPGVGVVPG 459
Score = 84 (34.6 bits), Expect = 7.2, P = 1.0
Identities = 71/236 (30%), Positives = 91/236 (38%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
+ I VGG+ V + P LGAG GV PG V V G PG +L
Sbjct: 62 VGGIGGVGGLGVST-GAVVPQ--LGAGVGAGVK-----PGKVPGV----GLPGVYPGGVL 109
Query: 61 DPANSVRFVDALLLAG---GSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVP-GAVIF- 115
P RF +L G G+ A G + GV G P VP G I
Sbjct: 110 -PGAGARFPGIGVLPGVPTGAGVKPKAPGGGGAFAGIP--GVGPFGGQQPGVPLGYPIKA 166
Query: 116 -DLPVG-GWNCRP-TADFGYSACAAAGVDVAVG-TVGVGVGARAGALKGGVGTASATLQS 171
LP G G + +G+ AG G G GVG +A A A+A L +
Sbjct: 167 PKLPAGYGLPYKTGKLPYGFGPGGVAGSAGKAGYPTGTGVGPQAAA---AAAKAAAKLGA 223
Query: 172 GVTVGVLAVVNAAGNVVDPATG-LPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
G GVL V G + A G +P + + G + AP A AA A ++ GA
Sbjct: 224 G-GAGVLPGVGVGGAGIPGAPGAIPGIGGIAG---VGAPDAAAAAAAAAKAAKFGA 275
^ = sptrembl|Q01914|Q01914 IpiB2 protein precursor.//:trembl|L23937|PIIBIB2B_1
gene: "ipiB2"; Phytophthora infestans ipiB2 gene, complete cds.
//:gp|L23937|397687 ipiB2 [Phytophthora infestans]
Length = 343
0 70 140 210 280
| | | | | |343
sptrembl|Q01914|Q0191 | __________________________________________________
Local hits (HSPs) | _______________________________
Score = 93 (37.8 bits), Expect = 0.28, P = 0.24
Identities = 61/189 (32%), Positives = 72/189 (38%)
Query: 8 GGIRVGHYQRLDPDASLGAGWA-CGVTVVLPPPGTVGA-VDCRGGAPGTRETDLLDPANS 65
GG+ G Y R GAG+ G + G VGA + RG G L
Sbjct: 82 GGVGAGLYGR-------GAGYGGAGAGLYGRGAGGVGAGLYGRGAGYGGAGAGLY--GRG 132
Query: 66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCR 125
V A L G+AYG A A G+ E G A +GV V GA + + GG
Sbjct: 133 AGGVGAGLYGRGAAYGGAGA-GLFG--REAGYGGA-GAGVGAGVGGAGLGN-GYGGVGVG 187
Query: 126 PTADFGYSACAAAGVDVAVGT-VGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAA 184
T G A GV VG VGVG A GA GG +GV GV N
Sbjct: 188 GTTGVGAGAGVGGGVSGNVGAGVGVGGNAAVGAGVGGAANGGVGANAGVGAGVSG--NTG 245
Query: 185 GNVVDPATG 193
V A+G
Sbjct: 246 AGVGGGASG 254
Score = 85 (35.0 bits), Expect = 2.1, P = 0.88
Identities = 64/202 (31%), Positives = 77/202 (38%)
Query: 8 GGIRVGHYQRLDPDASLGAGWA-CGVTVVLPPPGTVGA-VDCRGGAPGTRETDLLDPANS 65
GG+ G Y R GAG+ G + G VGA + RG A G L
Sbjct: 108 GGVGAGLYGR-------GAGYGGAGAGLYGRGAGGVGAGLYGRGAAYGGAGAGLFGREAG 160
Query: 66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCR 125
A + AG GL G + GV +GV V G V + VGG N
Sbjct: 161 YGGAGAGVGAGVGGAGLGNGYGGVG--VGGTTGVGAGAGVGGGVSGNVGAGVGVGG-NAA 217
Query: 126 PTADFGYSAC----AAAGVDVAV-GTVGVGVGARA-GALKGGVGTASATLQSGV--TVGV 177
A G +A A AGV V G G GVG A G GGV +A+A + GV + GV
Sbjct: 218 VGAGVGGAANGGVGANAGVGAGVSGNTGAGVGGGASGGANGGV-SANAGVGGGVGGSAGV 276
Query: 178 LAVVNAAGNVVDPATGLPWMAD 199
V G A G D
Sbjct: 277 GGSVGVGGAASTGAGGATTTTD 298
^ = sptrembl|Q9S209|Q9S209 Hypothetical protein
SCO1791.//:tremblnew|AL939110|SCO939110_94 gene: "SCO1791";
"SCI51.31c"; product: "hypothetical protein"; Streptomyces
coelicolor A3(2) complete genome; segment 7/29
//:trembl|AL939110|SCO939110_94 gene: "SCO1791"; "SCI51.31c";
product: "hypothetical protein"; Streptomyces coelicolor A3(2)
complete genome; segment 7/29 //:pironly|T36894|T36894 hypothetical
protein SCI51.31c - Streptomyces coelicolor//:gp|AL939110|5738507
hypothetical protein [Streptomyces coelicolor
A3(2)]//:gpnew|AL939110|5738507 hypothetical protein [Streptomyces
coelicolor A3(2)]
Length = 419
0 90 180 270 360
| | | | | |419
sptrembl|Q9S209|Q9S20 | __________________________________________________
Local hits (HSPs) | __________________________________
Score = 94 (38.1 bits), Expect = 0.29, P = 0.25
Identities = 55/208 (26%), Positives = 80/208 (38%)
Query: 126 PTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG 185
PT D SA +A G V V T G+ G G+ + VG + + +V V G
Sbjct: 17 PTTD--RSATSADGTVVTVATAGISAGTAVGSAETTVGATTVADSAVASVVTTETVGRVG 74
Query: 186 NV-VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF--NTPFNTTIGVIACDA 242
+ + ATG+ + G +R P+ AA +S GA T T V+
Sbjct: 75 TIAIVVATGVS--VAMTGVVTVR--PS---AATTVVSVGTGATVPRTVATTAESVVTAPP 127
Query: 243 ALSPAACRRIA-IAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQ 301
++ A + I A + T + G T A+ T A V VPA T
Sbjct: 128 SVGTIAVMTVVTIGAMTAVGSAAASVVTTV-GMT--AVMTAATVVARTTAVPATGVGTTG 184
Query: 302 LVTAVGAAAADCLARAVLAGVLNAQPVA 329
V A GA+ A + GV+ +P A
Sbjct: 185 TVAATGASVA-------MTGVVTVRPSA 205
Score = 94 (38.1 bits), Expect = 0.29, P = 0.25
Identities = 63/235 (26%), Positives = 98/235 (41%)
Query: 99 VAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGAL 158
VAM +GVV + P A + VG P +A + +VGT+ V GA+
Sbjct: 86 VAM-TGVVTVRPSAATTVVSVGTGATVPRT-VATTAESVVTAPPSVGTIAVMTVVTIGAM 143
Query: 159 KGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALA 218
VG+A+A++ + TVG+ AV+ AA VV T +P A VG A +A
Sbjct: 144 TA-VGSAAASVVT--TVGMTAVMTAA-TVVARTTAVP--ATGVGTTGTVAATGASVAMTG 197
Query: 219 QLSSPLGAFNTPFNTTIGV-IACDAALSPAACRRIA-IAAHDGLARTIRPAHTPLDGDTV 276
++ A T + G + A + R + A + T+ P+ G TV
Sbjct: 198 VVTVRPSAATTVVSVGTGATVPRTVATTGVTVPRTGGMTAVTTVGMTVLPSGAMTVGMTV 257
Query: 277 FALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI 331
L +GA+ GV +A++ T L + V A + + +GV A I
Sbjct: 258 --LPSGAMT-----GVTSAVT--TVLPSGVTTGAMTAVTTVLPSGVTTAVTTVAI 303
^ = sptrembl|Q8DHN4|Q8DHN4 ArgJ protein.//:trembl|AP005375|AP005375_192 gene:
"argJ"; Thermosynechococcus elongatus BP-1 DNA, complete genome,
section 7/9. //:gp|AP005375|22295637 ORF_ID:tll1911~arginine
biosynthesis bifunctional protein ArgJ includes glutamate
n-acetyltransferase and amino-acid acetyltransferase
[Thermosynechococcus elongatus BP-1]
Length = 419
0 90 180 270 360
| | | | | |419
sptrembl|Q8DHN4|Q8DHN | __________________________________________________
Local hits (HSPs) | ______________
Score = 94 (38.1 bits), Expect = 0.29, P = 0.25
Identities = 35/119 (29%), Positives = 50/119 (42%)
Query: 199 DLVG-EFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAH 257
DLV + AL A Q + ++ G + T + I CDAA+SP + + A
Sbjct: 156 DLVPKQIALEAEWEGQTIRIGGMAKGSGMIHPKMATMLAFITCDAAVSPHLWQEMLQRAC 215
Query: 258 DGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLAR 316
D I D+V ALA G P A AA + +++TAV A +AR
Sbjct: 216 DRSFNQITVDGDTSTNDSVIALANGQSRTPAIAEPGAAATRLEEMLTAVCVHLAKAIAR 274
^ = sptrembl|Q14234|Q14234 Elastin.//:trembl|M17282|HSEL20_3 gene: "ELN";
product: "elastin"; Human elastin gene, exon 1.
//:gp|M17282|182021 elastin [Homo sapiens]
Length = 757
0 160 320 480 640
| | | | | |757
sptrembl|Q14234|Q1423 | __________________________________________________
Local hits (HSPs) | ______________________________________
Score = 97 (39.2 bits), Expect = 0.29, P = 0.25
Identities = 71/252 (28%), Positives = 94/252 (37%)
Query: 98 GVAMDSGVVP-IVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVD---VAVGTVGVGVGA 153
GVA GV P I PG V A +A AG+ V VG G+GVGA
Sbjct: 508 GVAPGVGVAPGIGPGGVAAAAKSAA-KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGA 566
Query: 154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATG-----LPWMADLVGEFALRA 208
L GVG +G GV ++ DP++ P + G A A
Sbjct: 567 GVPGL--GVGAGVPGFGAGADEGVRRSLSPELREGDPSSSQHLPSTPSSPRVPGALAA-A 623
Query: 209 PPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAH 268
A+ AA+ + LGA GV+ A + AA + A AA GL
Sbjct: 624 KAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 682
Query: 269 TPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPV 328
+ G V + G +PP A AA L +G A + L GV A+P
Sbjct: 683 LGVGGLGVPGVG-GLGGIPPAAAAKAAKYGAAGLGGVLGGAG-----QFPLGGVA-ARPG 735
Query: 329 AGIPTYRDMFPG 340
G+ +FPG
Sbjct: 736 FGLSP---IFPG 744
Score = 95 (38.5 bits), Expect = 0.49, P = 0.39
Identities = 89/339 (26%), Positives = 120/339 (35%)
Query: 9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
G VG A A + G VLP G G G PG + PA +
Sbjct: 247 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 306
Query: 68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
A A G+A GL GV+ GV + +P+VPGA I V G
Sbjct: 307 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 366
Query: 122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVGVL 178
A + A G VG G+ G AG G GVG +GV +VG
Sbjct: 367 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGG- 425
Query: 179 AVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQ-IAALAQLSSPLGAFNTPFNTTIGV 237
V G V P G+ A + A A A+ + A ++ A F GV
Sbjct: 426 --VPGVGGV--PGVGISPEA----QAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 477
Query: 238 -IACDAALSPAACRRIAIAAHDGLARTI--RPAHTPLDGDTVF-ALATGAVAVPPEAGVP 293
+A ++P + +A GLA + P G V + G VA ++
Sbjct: 478 GVAPGVGVAPG----VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSA-- 531
Query: 294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
A ++ + QL A G A V GV AG+P
Sbjct: 532 AKVAAKAQLRAAAGLGAG-IPGLGVGVGVPGLGVGAGVP 569
Score = 89 (36.4 bits), Expect = 2.2, P = 0.89
Identities = 69/259 (26%), Positives = 89/259 (34%)
Query: 98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
GV +GV P PG +P VG + +P GY A G+ G +
Sbjct: 168 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 227
Query: 149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
G G G + G G A +G VG A AA G + VG +
Sbjct: 228 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283
Query: 208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
P A+ + G TP A AA AA + G +
Sbjct: 284 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 334
Query: 268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
P G + + V P AG+P A P +V+ AAA A+A G
Sbjct: 335 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 390
Query: 328 VAGIPTY---RDMFPGAFG 343
V GIPTY FPG FG
Sbjct: 391 VGGIPTYGVGAGGFPG-FG 408
^ = sptrembl|Q8G9V7|Q8G9V7 Hypothetical protein.//:trembl|AJ494981|ECO494981_61
product: "hypothetical protein"; Escherichia coli pathogenicity
island II, strain 536 //:gp|AJ494981|23954279 hypothetical protein
[Escherichia coli]
Length = 92
0 20 40 60 80
| | | | | |92
sptrembl|Q8G9V7|Q8G9V | __________________________________________________
Local hits (HSPs) | ________________________
Score = 71 (30.1 bits), Expect = 0.31, P = 0.27
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
C AD + C AA V++ +G VG G +KG VG +A + SGV
Sbjct: 16 CIEAAD---AMCKAANVEL-IGYENVGSGLVTAMVKGDVGAVNAAVDSGV 61
^ = swiss|P54320|ELS_MOUSE Elastin precursor
(Tropoelastin).//:trembl|U08210|MM08210_1 product: "tropoelastin";
Mus musculus tropoelastin mRNA, complete cds. //:pironly|EAMS|EAMS
elastin precursor - mouse//:gp|U08210|473274 tropoelastin [Mus
musculus]
Length = 860
0 180 360 540 720
| | | | | |860
swiss|P54320|ELS_MOUS | __________________________________________________
Local hits (HSPs) | __________________
Score = 97 (39.2 bits), Expect = 0.34, P = 0.29
Identities = 76/275 (27%), Positives = 93/275 (33%)
Query: 75 AGGSAYGLAAADGV-MRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYS 133
AGG A G GV + + +G ++PG +P GG P G
Sbjct: 296 AGGKA-GYPTGTGVGSQAAAAAAKAAKYGAGGAGVLPGVGGGGIP-GGAGAIP----GIG 349
Query: 134 ACAAAGVDVAVGTVGVGV-----GARAGALKGGVGTASATLQSGVT-VGVLAVVNAAGNV 187
A AG A GA G + GG G +G+ VG + V V
Sbjct: 350 GIAGAGTPAAAAAAKAAAKAAKYGAAGGLVPGGPGVRLPG--AGIPGVGGIPGVGGIPGV 407
Query: 188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP-FNTTIGV-----IACD 241
P G P + G A+ A + AA A G P + G +
Sbjct: 408 GGPGIGGPGIVG--GPGAVSPAAAAKAAAKAAKYGARGGVGIPTYGVGAGGFPGYGVGAG 465
Query: 242 AAL---SPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV-AVPPEAGVPAALS 297
A L SPAA A AA G A L V GAV AVP GVP A +
Sbjct: 466 AGLGGASPAAAAAAAKAAKYGAGGA--GALGGLVPGAVPGALPGAVPAVPGAGGVPGAGT 523
Query: 298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
P A AAA + GV V GIP
Sbjct: 524 PAAAAAAAAAKAAAKAGLGPGVGGVPGGVGVGGIP 558
Score = 89 (36.4 bits), Expect = 2.6, P = 0.92
Identities = 40/124 (32%), Positives = 51/124 (41%)
Query: 104 GVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVG 163
G VP VPGA +P G A A A AG+ VG V GVG G + GGVG
Sbjct: 507 GAVPAVPGAG--GVPGAGTPAAAAAAAAAKAAAKAGLGPGVGGVPGGVGV--GGIPGGVG 562
Query: 164 TASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP 223
+ GV G + + A + A G P A + A +A Q A A L +
Sbjct: 563 VGG--VPGGVGPGGVTGIGAGPGGLGGA-GSPAAAKSAAKAAAKA----QYRAAAGLGAG 615
Query: 224 LGAF 227
+ F
Sbjct: 616 VPGF 619
^ = sptrembl|Q98JW2|Q98JW2 Hypothetical protein
mll1751.//:trembl|AP002998|AP002998_75 gene: "mll1751";
Mesorhizobium loti DNA, complete genome, section 5/21.
//:gp|AP002998|14022444 hypothetical protein [Mesorhizobium loti]
Length = 251
0 50 100 150 200 250
| | | | | |251
sptrembl|Q98JW2|Q98JW | __________________________________________________
Local hits (HSPs) | ____________
Score = 90 (36.7 bits), Expect = 0.35, P = 0.30
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 119 VGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL 178
VGG N A+ G S A+AG+ ++G G G A AGA GG +ASA L G +VG
Sbjct: 68 VGGSNAGAGANVGGSNSASAGLGASIGGGG-GSNAGAGANVGGSNSASAGL--GASVGGS 124
Query: 179 AVVNAAGNV 187
+N V
Sbjct: 125 GGINTGAGV 133
^ = sptrembl|Q9HQP1|Q9HQP1 Vng1069c.//:trembl|AE005039|AE005039_11 gene:
"VNG1069C"; product: "Vng1069c"; Halobacterium sp. NRC-1 section
70 of 170 of the complete genome. //:pironly|D84263|D84263
hypothetical protein Vng1069c [imported] - Halobacterium sp.
NRC-1//:gp|AE005039|10580618 Vng1069c [Halobacterium sp. NRC-1]
Length = 296
0 60 120 180 240
| | | | | |296
sptrembl|Q9HQP1|Q9HQP | __________________________________________________
Local hits (HSPs) | _________________________________________
Score = 91 (37.1 bits), Expect = 0.36, P = 0.30
Identities = 71/268 (26%), Positives = 99/268 (36%)
Query: 66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVP-IVPGAVIFDLPVGGWNC 124
V V AL+ GS G A +R L+ V + +GVV +V A + D+ +
Sbjct: 37 VATVVALVPRLGSRDGRATVAETLRALDVPFLAV-LGAGVVSAVVTVASVVDV---AYTQ 92
Query: 125 RPTADFGYS-ACAAAGVDVAVGTVGVGVGARAGALKGGVGTA---SATLQSGVTVGVLAV 180
P F + AA V V +G V V R GA GG A SA +G LAV
Sbjct: 93 YPGLTFAFFFGLIAASVVVLIGEVAVDTPGRIGAALGGFALAFAVSAQATAGTLPDGLAV 152
Query: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
+ G V A LP ++ G L L + + A +T +
Sbjct: 153 MVVTGAVAICAMVLPGVS---GSLIL--------LTLGKYETMTSAVSTAVDAVAAGALG 201
Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
DA A ++ A G+ R L + AT V AG A +P
Sbjct: 202 DAVAPVATLAAFSLGALAGVLTFARVVQWAL---AEYRAATVTFLVALMAG--ALRAPAV 256
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPV 328
++ A A +A V AGV+ A V
Sbjct: 257 RIADATAAWTVGSVAPLVAAGVVGAAAV 284
^ = sptrembl|Q8G9V6|Q8G9V6 Hypothetical protein.//:trembl|AJ494981|ECO494981_62
product: "hypothetical protein"; Escherichia coli pathogenicity
island II, strain 536 //:gp|AJ494981|23954280 hypothetical protein
[Escherichia coli]
Length = 94
0 20 40 60 80
| | | | | |94
sptrembl|Q8G9V6|Q8G9V | __________________________________________________
Local hits (HSPs) | _______________________
Score = 70 (29.7 bits), Expect = 0.40, P = 0.33
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
C AD + C AA V++ +G VG G +KG VG A + SGV
Sbjct: 16 CIEAAD---AMCKAANVEL-IGYENVGSGLVTAMVKGDVGAVKAAVDSGV 61
^ = sptrembl|Q8PGR8|Q8PGR8 Outer membrane protein.//:trembl|AE012004|AE012004_2
gene: "xadA"; product: "outer membrane protein"; Xanthomonas
axonopodis pv. citri str. 306, section 382 of 469 of the complete
genome. //:gp|AE012004|21109920 outer membrane protein [Xanthomonas
axonopodis pv. citri str. 306]
Length = 1114
0 230 460 690 920
| | | | | |1114
sptrembl|Q8PGR8|Q8PGR | __________________________________________________
Local hits (HSPs) | ________
Score = 97 (39.2 bits), Expect = 0.46, P = 0.37
Identities = 57/190 (30%), Positives = 80/190 (42%)
Query: 18 LDPDAS-LG--AGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLL 74
LD DA+ +G A A ++ L TV D G G RE V L
Sbjct: 192 LDRDATAIGHNAAAAGESSIALGGVATVFDYDANGFVVGQREQATQASGVGATAVGGGAL 251
Query: 75 AG---GSAYGL-AAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPVGGWNCRPTAD 129
AG SA G A+A GV +R + D V + A F GG++ R +AD
Sbjct: 252 AGTPYASAIGSGASASGVQSTALGYRAQTSSDGATAVGGLSSASGFLSTAGGYSSRASAD 311
Query: 130 ----FGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGT-ASATLQSGVTVGVLAVVNAA 184
FGY A + VAVG + GA++ + GGV S T +G+ G +A+ + A
Sbjct: 312 TSTAFGYRARSDGASSVAVGDTSLASGAQS-VVVGGVSNFGSITAATGL--GGIALGSGA 368
Query: 185 GNVVDPATGL 194
+ D A +
Sbjct: 369 QSQSDYAIAI 378
^ = sptrembl|Q93N87|Q93N87 Peptide synthetase.//:trembl|AF386507|AF386507_5
product: "peptide synthetase"; Streptomyces lavendulae
complestatin biosynthetic gene cluster, complete sequence.
//:gp|AF386507|15029321 peptide synthetase [Streptomyces
lavendulae]
Length = 4898
0 980 1960 2940 3920
| | | | | |4898
sptrembl|Q93N87|Q93N8 | __________________________________________________
Local hits (HSPs) | _ _
Score = 90 (36.7 bits), Expect = 0.47, Sum P(2) = 0.38
Identities = 34/138 (24%), Positives = 57/138 (41%)
Query: 49 GGAPGTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPI 108
G P R +L+ ++ +DA++ GG A +A +G + ++ GV
Sbjct: 2054 GAYPAERVAFVLEDSSPAVTIDAVVKGGGEAPSVAVTEGDLAYVMYTSGSTGTPKGVA-- 2111
Query: 109 VP-GAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASA 167
VP G+V + GW P + A A + + V + GAR + GV +A
Sbjct: 2112 VPHGSVAALVGETGWGLGPGDSVLFHAPHAFDISLFEVWVPLASGARVVIAEPGVAVDAA 2171
Query: 168 TLQSGVTVGVLAVVNAAG 185
++ + GV V AG
Sbjct: 2172 AVRRHIAAGVTHVHVTAG 2189
Score = 65 (27.9 bits), Expect = 0.47, Sum P(2) = 0.38
Identities = 33/125 (26%), Positives = 50/125 (40%)
Query: 204 FALRAPPAEQIAALAQLSSPLGAFN--TPFNTTIGVIACDAALSPAACRRIAIAAHDGLA 261
F + P E++A LA+ ++ A P+ + + D + PA +A+ A A
Sbjct: 4433 FVEKTP--ERLALLAEAAAAEEAATGEVPWTPAMRAVPADGTV-PAQWVELAVPAGLDPA 4489
Query: 262 RTIRPAHTPLDGDTVFALATGAVAVPPEAGVP--AALSPETQLVTAVGAAAADCLARAVL 319
+R LD + G V E G P A L T + A AD ++R
Sbjct: 4490 ALVRALRAVLDTHAMLRCRIGEELVVGEPGAPDAAGLIDRVDADTPLDDAVADAVSRLDP 4549
Query: 320 A-GVL 323
A GVL
Sbjct: 4550 AEGVL 4554
^ = swissnew|P02834|HMUX_DROME Homeotic Ultrabithorax
protein.//:swiss|P02834|HMUX_DROME Homeotic Ultrabithorax
protein.//:tremblnew|AE003714|AE003714_29 gene: "Ubx"; product:
"CG10388-PA"; Drosophila melanogaster chromosome 3R, section 52 of
118 of the complete sequence. //:trembl|AE003714|AE003714_29 gene:
"Ubx"; product: "CG10388-PA"; Drosophila melanogaster chromosome
3R, section 52 of 118 of the complete sequence.
//:trembl|AF099983|AF099983_1 product: "Ultrabithorax"; Drosophila
simulans Ultrabithorax gene, exon 4 and complete cds.
//:trembl|X05723|DMUBX1_1 gene: "Ubx"; product: "Ultrabithorax gene
product"; Drosophila melanogaster Ubx gene for Ultrabithorax, exon
1 and joined CDS //:trembl|X76210|DMUBXGENE_1 gene: "Ubx"; product:
"homeotic ultrabithorax protein"; D.melanogaster mRNA for homeotic
ultrabithorax protein //:gp|AF099983|4323521 Ultrabithorax
[Drosophila simulans]//:gp|X76210|433477 homeotic ultrabithorax
protein [Drosophila melanogaster]//:gp|X05723|829190 Ultrabithorax
gene product [Drosophila melanogaster]//:gp|AE003714|10726569
CG10388-PA [Drosophila melanogaster]//:gpnew|AE003714|10726569
CG10388-PA [Drosophila melanogaster]
Length = 389
0 80 160 240 320
| | | | | |389
swissnew|P02834|HMUX_ | __________________________________________________
Local hits (HSPs) | ________________
Score = 91 (37.1 bits), Expect = 0.56, P = 0.43
Identities = 42/134 (31%), Positives = 56/134 (41%)
Query: 76 GGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSAC 135
GG A G A + G +G +P+ P A D VGG+ T+ G S
Sbjct: 121 GGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGY--LDTS--GGSPV 176
Query: 136 AAAGVDVAVGTVGVGVG-ARAGALKGGVGTASA--TLQSGVTVGVLAVVNAAGNVVDPA- 191
+ G A G V V G AG ++ GVG A A + T+ A AA + + A
Sbjct: 177 SHRGGS-AGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQAS 235
Query: 192 --TGLPWMADLVGE 203
T PWMA + GE
Sbjct: 236 NHTFYPWMA-IAGE 248
^ = sptrembl|Q8VC49|Q8VC49 Similar to TLH29
protein.//:trembl|BC021795|BC021795_1 product: "Similar to TLH29
protein precursor"; Mus musculus, Similar to TLH29 protein
precursor, clone MGC:25891 IMAGE:4217067, mRNA, complete cds.
//:gp|BC021795|18257335 Similar to TLH29 protein precursor [Mus
musculus]
Length = 283
0 60 120 180 240
| | | | | |283
sptrembl|Q8VC49|Q8VC4 | __________________________________________________
Local hits (HSPs) | ____________________________________
Score = 89 (36.4 bits), Expect = 0.56, P = 0.43
Identities = 54/214 (25%), Positives = 76/214 (35%)
Query: 119 VGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGG---VGTASATLQSGVTV 175
+GG A SA G +A G++ + + A GG G ATLQS +
Sbjct: 10 IGGALAVAGAPVALSAVGFTGAGIAAGSIAAKMMSAAAIANGGGIAAGGLVATLQSVGVL 69
Query: 176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP---------LGA 226
G+ + N V ATG + + P + L + P LG
Sbjct: 70 GLSTITNIILVAVGTATGARAEGSMGASREQESGPQDPPQELQEPQEPPSCKKQDLNLGK 129
Query: 227 F-NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVA 285
F + V ALS IAA +A + A +G + A G VA
Sbjct: 130 FVGAAIGGALAVAGAPIALSAVGFTGAGIAA-GSIAAKMMSAAAIANGGGI--AAGGLVA 186
Query: 286 VPPEAGVPAALSPETQLVT-AVGAAAADCLARAV 318
G+ LS T ++ AVGAA A A+
Sbjct: 187 TLQSVGI-LGLSTSTNIILGAVGAATGATAAGAM 219
^ = sptrembl|Q9WX72|Q9WX72 Hypothetical 59.2 kDa protein (ORF569
protein).//:trembl|AB015803|AB015803_8 gene: "ORF569"; Acetobacter
xylinus ORF200, ORF569, bcsABII-A, bcsX, bcxY, bcsCII and ORF569
genes, complete cds. //:gp|AB015803|4827171 ORF569
[Gluconacetobacter xylinus]
Length = 569
0 120 240 360 480
| | | | | |569
sptrembl|Q9WX72|Q9WX7 | __________________________________________________
Local hits (HSPs) | __________________
Score = 93 (37.8 bits), Expect = 0.56, P = 0.43
Identities = 56/212 (26%), Positives = 87/212 (41%)
Query: 136 AAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSG--VTVGVLAVVNAAGNVVDPAT 192
A G +A G +G V +G G + + +G T + AG V D A
Sbjct: 324 ALPGGTLAGGYIGYNVDGGPWFAQGRNTGQWTGIVIAGHAPTPDEVQAFAVAGAVADDA- 382
Query: 193 GLPWMADL---VGEFALRA---PPAEQIAALAQLSSPLGAFNTPFN--TT---IGVIACD 241
+P + D+ +G+ P L Q + ++N + TT +G++
Sbjct: 383 -MPQLRDVLVTIGDSRTEGFVVPDGRNWPYLMQRFARYRSYNLAVSGATTRHMLGMLPAA 441
Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQ 301
A++ RR+A+ G + H P D +TV LAT + +AG AL E Q
Sbjct: 442 EAVARGGARRLAVV-FGGYNDHLPGNHIPTD-ETVRNLATITGRLK-QAGYTVALIEEAQ 498
Query: 302 LVTAVGAAAADCLARAVLAGVLNAQPVA-GIP 332
A AA D +AR +LA + P A G+P
Sbjct: 499 TTGAPRAAIHDAIARGILAPDIALDPFAPGLP 530
^ = sptrembl|O33312|O33312 PPE-family protein (PPE family
protein).//:trembl|AE007111|AE007111_8 gene: "MT2840"; product:
"PPE family protein"; Mycobacterium tuberculosis CDC1551, section
197 of 280 of the complete genome. //:trembl|AL008967|MTV002_35
gene: "PPE"; product: "PPE"; Mycobacterium tuberculosis H37Rv
complete genome; segment 122/162 //:pironly|A70882|A70882 probable
PPE protein - Mycobacterium tuberculosis (strain
H37RV)//:gp|AL008967|2624292 PPE [Mycobacterium tuberculosis
H37Rv]//:gp|AE007111|13882603 PPE family protein [Mycobacterium
tuberculosis CDC1551]
Length = 402
0 80 160 240 320 400
| | | | | |402
sptrembl|O33312|O3331 | __________________________________________________
Local hits (HSPs) | _______________________________________________
Score = 91 (37.1 bits), Expect = 0.59, P = 0.44
Identities = 59/222 (26%), Positives = 89/222 (40%)
Query: 82 LAAADGVMRWLE-EHRRGVAMDSGVVPI-VPGAVIFDLPVGGWNCRPTADFGYSACAAAG 139
+AA+DG + +R ++D G +P V A ++ GG AD +A A G
Sbjct: 1 MAASDGAPATTALDQKRNASVDFGALPPEVNSARMY----GGAGA---ADLLAAAAAWNG 53
Query: 140 VDVAVGTVGVGVGARAGAL--KGGVGTASATLQSGVTVGVLAVV-NAAGNVVDPATGLPW 196
+ V V T VG+ L + +G AS ++ + V ++ + A + + A +
Sbjct: 54 IAVEVSTAASSVGSVITRLSTEHWMGPASLSMAAAVQPYLVWLTCTAESSALAAAQAMAS 113
Query: 197 MADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPA----ACRRI 252
A FAL PPAE +A A L+ L A N + A +A A
Sbjct: 114 AAAFETAFALTVPPAEVVANRALLAE-LTATNILGQNVSAIAATEARYGEMWAQDASAMY 172
Query: 253 AIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
AA +A + P P LA A AV +AG A
Sbjct: 173 GYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVG-QAGASA 213
Score = 81 (33.6 bits), Expect = 7.5, P = 1.0
Identities = 53/192 (27%), Positives = 73/192 (38%)
Query: 131 GYSACAA-AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAA----G 185
G SA A G+ + V V + A + T ++ + + V V +A G
Sbjct: 210 GASAFARQVGLSHLISDVADAVLSFASPVMSAADTGLEAVRQFLNLDVPLFVESAFHGLG 269
Query: 186 NVVDPATG----LPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
V D AT + +AD +G AP AA+A +P G T +G +
Sbjct: 270 GVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVGGTALTADLGNASVV 329
Query: 242 AALS-PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
LS PA+ A A G A LDG TG AVP E G A + P
Sbjct: 330 GRLSVPASWSTAAPATAAGAA---------LDG-------TGW-AVPEEDGPIAVMPPAP 372
Query: 301 QLVTAVGAAAAD 312
+V A + AD
Sbjct: 373 GMVVAANSVGAD 384
^ = sptrembl|Q9BIU2|Q9BIU2 Fibroin 1 (Fragment).//:trembl|AF350271|AF350271_1
product: "fibroin 1"; Euagrus chisoseus fibroin 1 mRNA, partial
cds. //:gp|AF350271|13561994 fibroin 1 [Euagrus chisoseus]
Length = 734
0 150 300 450 600
| | | | | |734
sptrembl|Q9BIU2|Q9BIU | __________________________________________________
Local hits (HSPs) | _________________________
Score = 94 (38.1 bits), Expect = 0.60, P = 0.45
Identities = 58/216 (26%), Positives = 87/216 (40%)
Query: 131 GYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
G S A+AG VA GVGVGA A A + A A++ + G+L+V +AA
Sbjct: 130 GLSYLASAGASAVASAVAGVGVGAGAYAYAYAIANAFASILANT--GLLSVSSAASVASS 187
Query: 190 PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAAC 249
A+ + A V + A + AA A S+ A + + + A +A + AA
Sbjct: 188 VASAI---ATSVSSSSAAAAASASAAAAASASAASSA-SASSSASAAAAAGASAAAGAAS 243
Query: 250 RRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVG-A 308
A AA + A L G + F G++ G+ A + + ++G
Sbjct: 244 SASASAAASAFSSAFISA---LLGFSQFNSVFGSIT-SASLGLGIAANAVQSGLASLGLG 299
Query: 309 AAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
AAA A AV LN +G Y A G+
Sbjct: 300 AAASAAASAVANAGLNG---SGAYAYATAIASAIGN 332
Score = 85 (35.0 bits), Expect = 5.8, P = 1.0
Identities = 55/217 (25%), Positives = 78/217 (35%)
Query: 131 GYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG-VTVGVLAVVNAAGNVVD 189
G +A AAA G G G A A A+ +G +A L +G +T G + + A +V
Sbjct: 299 GAAASAAASAVANAGLNGSGAYAYATAIASAIG--NALLGAGFLTAGNASQI--AASVAS 354
Query: 190 PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAAC 249
A + A A A A SS +T + A AA + A
Sbjct: 355 AVASSASAAAAAASSSAAAAGASSAAGAASSSSTTTTTSTSSSAAAAAAAAAAASASGAS 414
Query: 250 RRIAIAAHDGLARTIRPAHT-PLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGA 308
A A+ A A L G VF G++ A A+ + + L + +G
Sbjct: 415 SASAAASASAAASAFSSALIGDLLGIGVFGNTFGSIGSASAASSIASAAAQAAL-SGLGL 473
Query: 309 A-AADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
+ A A AV + V AG Y AF S
Sbjct: 474 SYLASAGASAVASAVAGVGVGAGAYAYAYAIANAFAS 510
^ = pironly|JQ0138|JQ0138 hypothetical 18.2K protein - Pseudomonas aeruginosa
Length = 202
0 40 80 120 160 200
| | | | | |202
pironly|JQ0138|JQ0138 | __________________________________________________
Local hits (HSPs) | _______________________
Score = 86 (35.3 bits), Expect = 0.63, P = 0.47
Identities = 32/96 (33%), Positives = 41/96 (42%)
Query: 131 GYSACAAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSGVTVGVLAVVNAA--GNV 187
G++A AAG AV G G AG G G A+A +G+ G A + AA V
Sbjct: 92 GFAAGLAAGFAAAVFAAGFAAGFAAGFAAGLAAGFAAAVFAAGLAAGFAAGLAAAFAATV 151
Query: 188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP 223
+ A LV FALR A A+ L +P
Sbjct: 152 FTAGLAAAFAAGLVAGFALRLSRALPAASFT-LPTP 186
^ = sptrembl|Q9KYH3|Q9KYH3 Putative small secreted
protein.//:tremblnew|AL939113|SCO939113_174 gene: "SCO2699";
"SCC61A.20"; product: "putative small membrane protein";
Streptomyces coelicolor A3(2) complete genome; segment 10/29
//:trembl|AL939113|SCO939113_174 gene: "SCO2699"; "SCC61A.20";
product: "putative small membrane protein"; Streptomyces
coelicolor A3(2) complete genome; segment 10/29
//:gp|AL939113|8052408 putative small membrane protein
[Streptomyces coelicolor A3(2)]//:gpnew|AL939113|8052408 putative
small membrane protein [Streptomyces coelicolor A3(2)]
Length = 90
0 20 40 60 80
| | | | | |90
sptrembl|Q9KYH3|Q9KYH | __________________________________________________
Local hits (HSPs) | ________________________________
Score = 68 (29.0 bits), Expect = 0.66, P = 0.48
Identities = 22/57 (38%), Positives = 27/57 (47%)
Query: 137 AAGVDVAVGTV---GVGVG-ARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
AAGV + G V G G+ A AGA VG+ + V V V VN GN +D
Sbjct: 7 AAGVALGTGAVVLSGTGMAMADAGAAGAAVGSPGVLSGNVVQVPVHVPVNLCGNTID 63
^ = sptrembl|Q8DE18|Q8DE18 Hypothetical
protein.//:tremblnew|AE016799|AE016799_189 gene: "VV10787";
product: "Unknown"; Vibrio vulnificus CMCP6 chromosome I section 3
of 11 of the complete sequence. //:gp|AE016799|27360354 Unknown
[Vibrio vulnificus CMCP6]//:gpnew|AE016799|27360354 Unknown [Vibrio
vulnificus CMCP6]
Length = 86
0 20 40 60 80
| | | | | |86
sptrembl|Q8DE18|Q8DE1 | __________________________________________________
Local hits (HSPs) | __________________________________
Score = 68 (29.0 bits), Expect = 0.66, P = 0.48
Identities = 21/63 (33%), Positives = 27/63 (42%)
Query: 131 GYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP 190
G +A A T G GA AGA G T +A + +G V AVV ++ N
Sbjct: 22 GEAATATTATSTTAST-GAAAGAGAGAAGAGAATTAA-VAAGAAVAATAVVVSSNNTTG- 78
Query: 191 ATG 193
TG
Sbjct: 79 TTG 81
^ = sptrembl|O18504|O18504 Melanogenic peroxidase.//:trembl|Y11592|SOPEROXID_1
product: "melanogenic peroxidase"; S.officinalis mRNA for
peroxidase //:gp|Y11592|2239176 melanogenic peroxidase [Sepia
officinalis]
Length = 926
0 190 380 570 760
| | | | | |926
sptrembl|O18504|O1850 | __________________________________________________
Local hits (HSPs) | _____________
Score = 94 (38.1 bits), Expect = 0.79, P = 0.55
Identities = 59/197 (29%), Positives = 71/197 (36%)
Query: 138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWM 197
AGV A GT G A L GT AT + V A AGN A
Sbjct: 69 AGVAGAAGTAGAADAAGPLELLELDGTVDATGIAAVVGAARAAAGVAGNAAAAAAAAARA 128
Query: 198 ADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC------DAALSPAACRR 251
A + A+ A A AA A +++ A IA +A + A
Sbjct: 129 AGAT-DTAVAAAAAAANAAAAAVAAGADAATIAEAAAAAAIAAAAEADIEAVTNATAAAV 187
Query: 252 IAIAAHDGLARTIRPAHTPLDGDTVFALATGA--VAVPPEAGVPAALSPETQLVTAVGAA 309
IA A A I V A GA +A+ A V AA + ET +VTA A
Sbjct: 188 IAADARGADADVIAQVVAAAAAAAVNASTAGADDLAIAEAAAVAAAAAIETAIVTA-NAT 246
Query: 310 AADCLARAVLAGVL-NA 325
AA L A A L NA
Sbjct: 247 AAAALVNAEAAETLVNA 263
Score = 88 (36.0 bits), Expect = 3.6, P = 0.97
Identities = 74/267 (27%), Positives = 99/267 (37%)
Query: 75 AGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSA 134
A G+A G A A G + LE G +G+ +V GA V G N A +A
Sbjct: 74 AAGTA-GAADAAGPLELLELD--GTVDATGIAAVV-GAARAAAGVAG-NAAAAA--AAAA 126
Query: 135 CAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGL 194
AA D AV A A A+ G A+ ++ + A A V AT
Sbjct: 127 RAAGATDTAVAAAAAAANAAAAAVAAGADAATIA-EAAAAAAIAAAAEADIEAVTNATAA 185
Query: 195 PWMA-DLVGEFA-LRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRI 252
+A D G A + A AA A +S GA + V A AA+ A
Sbjct: 186 AVIAADARGADADVIAQVVAAAAAAAVNASTAGADDLAIAEAAAVAAA-AAIETAIVTAN 244
Query: 253 AIAAHDGLARTIRPAHTPLDGDTVFALATGAV-AVPP---EAGVPAALSPETQLVTAVGA 308
A AA L A T ++ D + A TG + A P + + L LVTA+
Sbjct: 245 ATAAA-ALVNA-EAAETLVNADLIIA-QTGLIFAETPRLIQDMLNQGLIDAENLVTAI-Q 300
Query: 309 AAADCLARAVLAGVLNAQPVAGIPTYR 335
+ +A A L A P YR
Sbjct: 301 PPLELIAECPFAAALTCD--AASP-YR 324
^ = sptrembl|Q8K6B1|Q8K6B1 Putative tail protein-phage
associated.//:tremblnew|AP005142|AP005142_162 gene: "SPs0444";
product: "hypothetical protein (phage associated)"; Streptococcus
pyogenes SSI-1 DNA, complete genome, section 2/6.
//:trembl|AE014163|AE014163_40 gene: "SpyM3_1421"; product:
"putative tail protein-phage associated"; Streptococcus pyogenes
MGAS315, section 28 of 37 of the complete genome.
//:gp|AE014163|21905164 putative tail protein - phage associated
[Streptococcus pyogenes phage 315.6] [Streptococcus pyogenes
MGAS315]//:gpnew|AP005142|28810602 hypothetical protein (phage
associated) [Streptococcus pyogenes SSI-1]
Length = 1460
0 300 600 900 1200
| | | | | |1460
sptrembl|Q8K6B1|Q8K6B | __________________________________________________
Local hits (HSPs) | ______
Score = 96 (38.9 bits), Expect = 0.80, P = 0.55
Identities = 58/205 (28%), Positives = 89/205 (43%)
Query: 140 VDVAVGTVGVGVGARAGALKGGVGTAS-------ATLQSGVTVGVLAVVNAAG-NVVDPA 191
V +A+G++G VGA G + G+ +AS ATL SG+ GV A G +V+
Sbjct: 645 VGLALGSLGTSVGAFGGIISSGIASASGVVGAFAATL-SGLP-GVFATAAGRGLSVLGTM 702
Query: 192 TGLPWMADLVGEFALRA-PPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACR 250
T M+ LV AL A PA A L + + LG N+ F I + L+ A +
Sbjct: 703 TSA--MSSLVS-LALAAIGPA---AILGLVVAGLGLINSQFGAQI-----EQLLNTAVTK 751
Query: 251 RIAIAAHDGLARTIRPAHTPL--DGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGA 308
I GL + I L G + A A+AV + A + T LV +G
Sbjct: 752 GPGII--QGLVKGITSKIPVLIASGTQLIAKFANAIAVLLPVIIQAGVQLITSLVQGIGQ 809
Query: 309 AAADCLARAV-LAGVLNAQPVAGIP 332
A + ++ A+ + G + + +P
Sbjct: 810 NATNLISSAIKIIGSFVSSIASALP 834
^ = sptrembl|Q8UDK8|Q8UDK8 Lytic murein
transglycosylase.//:trembl|AE008128|AE008128_1 gene: "AGR_C_3839";
product: "AGR_C_3839p"; Agrobacterium tumefaciens str. C58
circular chromosome, section 186 of 254 of the complete sequence.
//:trembl|AE009162|AE009162_1 gene: "Atu2117"; product: "lytic
murein transglycosylase"; Agrobacterium tumefaciens strain C58
circular chromosome, section 188 of 256 of the complete sequence.
//:pironly|AE2836|AE2836 lytic murein transglycosylase Atu2117
[imported] - Agrobacterium tumefaciens (st//:pironly|H97613|H97613
hypothetical protein AGR_C_3839 [imported] - Agrobacterium
tumefaciens (strain C//:gp|AE008128|15157253 AGR_C_3839p
[Agrobacterium tumefaciens str. C58
(Cereon)]//:gp|AE009162|17740579 lytic murein transglycosylase
[Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 358
0 80 160 240 320
| | | | | |358
sptrembl|Q8UDK8|Q8UDK | __________________________________________________
Local hits (HSPs) | ___________________________
Score = 89 (36.4 bits), Expect = 0.82, P = 0.56
Identities = 56/202 (27%), Positives = 69/202 (34%)
Query: 133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS--GVTVGVLAVVNAAGNVVDP 190
SAC + G G + T AT ++ G T AV A
Sbjct: 26 SACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPATAEAVAGATPAAPAVQTADAAASSQ 85
Query: 191 ATGLPW-MADLVGEFALRAPPAEQIAALA----QLSSPLGAFNTPFNTTIGVIACDAALS 245
A LP +A G AL PPA +IAA A Q+ P T A AAL
Sbjct: 86 AAALPTAVAVKGGRVAL--PPASEIAAAAAIATQMQQPTEVAGAAATTAAPTTA--AALV 141
Query: 246 PAACRRIAIAAHDGLARTIRPA-HTP-LDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
P A A A +PA H +D V A+ A PP G P+ + T
Sbjct: 142 PTHTTPAAAAIETANAAA-KPAMHNAAVDLPQVAAVKGSFPAAPPPPGSPSIGTELTAER 200
Query: 304 TAVGAAAADCLARAVLAGVLNA 325
+ D A AG NA
Sbjct: 201 KVIPLPKPDSTVLAYAAGPTNA 222
^ = sptrembl|Q98BA1|Q98BA1 Hypothetical protein
mll5666.//:trembl|AP003007|AP003007_73 gene: "mll5666";
Mesorhizobium loti DNA, complete genome, section 14/21.
//:gp|AP003007|14025471 unknown protein [Mesorhizobium loti]
Length = 229
0 50 100 150 200
| | | | | |229
sptrembl|Q98BA1|Q98BA | __________________________________________________
Local hits (HSPs) | _____________________
Score = 86 (35.3 bits), Expect = 0.82, P = 0.56
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 120 GGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
GG N A+ G S +AG+ +VG G+ A AGA GG G +A L G +VG +
Sbjct: 70 GGINAGAGANIGGSNGVSAGLGASVGDSS-GINAGAGANVGGSGVITARL--GASVGDRS 126
Query: 180 VVNA-AGNVVDPATGL 194
+NA AG V + G+
Sbjct: 127 GINAGAGANVGGSGGI 142
Score = 77 (32.2 bits), Expect = 8.6, P = 1.0
Identities = 30/70 (42%), Positives = 36/70 (51%)
Query: 120 GGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
GG N A G S AG+ +VG G G+ A AGA GG SA L G +VG +
Sbjct: 42 GGVNAGVGASAGGSGGINAGLGASVGGSG-GINAGAGANIGGSNGVSAGL--GASVGDSS 98
Query: 180 VVNA-AG-NV 187
+NA AG NV
Sbjct: 99 GINAGAGANV 108
^ = sptrembl|Q8NBI4|Q8NBI4 Hypothetical protein
NT2RP3003474.//:trembl|AK075554|AK075554_1 unnamed ORF; Homo
sapiens cDNA PSEC0254 fis, clone NT2RP3003474, moderately similar
to ELASTIN PRECURSOR. //:gp|AK075554|22761779 unnamed protein
product [Homo sapiens]
Length = 643
0 130 260 390 520
| | | | | |643
sptrembl|Q8NBI4|Q8NBI | __________________________________________________
Local hits (HSPs) | ____________________________
Score = 92 (37.4 bits), Expect = 0.85, P = 0.57
Identities = 92/338 (27%), Positives = 118/338 (34%)
Query: 9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
G VG A A + G VLP G G G PG + PA +
Sbjct: 211 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 270
Query: 68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
A A G+A GL GV+ GV + +P+VPGA I V G
Sbjct: 271 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 330
Query: 122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGT-ASATLQSGVTVGVL 178
A + A G VG G+ G AG G GVG A A +
Sbjct: 331 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGAEAQAAAAAKAAKY 390
Query: 179 AVVNAAGNVVDPATGL-PWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
+V G V P G+ P + G + P +A ++ +G P GV
Sbjct: 391 GLVPGVG--VAPGVGVAPGVGVAPG---VGLAPGVGVAPGVGVAPGVGV--APGIGPGGV 443
Query: 238 IAC-DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAAL 296
A +A AA ++ AA GL I P G V G A P GV A +
Sbjct: 444 AAAAKSAAKVAAKAQLRAAA--GLGAGI-----PGLGVGVGVPGLGVGAGVPGLGVGAGV 496
Query: 297 SPETQLVTAVGAAAADCLARAV--LAGVLNAQPVAGIP 332
+ A+ AA A AV + G L A GIP
Sbjct: 497 PGFGAVPGALAAAKAANYGAAVPGVLGGLGALGGVGIP 534
Score = 86 (35.3 bits), Expect = 3.9, P = 0.98
Identities = 87/348 (25%), Positives = 123/348 (35%)
Query: 3 SITDVGGIR-VGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
+I +GGI VG A+ G L P G G G PG +
Sbjct: 252 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPGVVGVPGAGVPGVGV 310
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P + V + G + G+ + + + + + A GV V G + + GG
Sbjct: 311 PGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARP-GVG--VGGIPTYGVGAGG 367
Query: 122 WNCRPTADFGYSACAAAGVDVA-VGTV-GVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
+ G A AAA A G V GVGV G G VG A G+ GV
Sbjct: 368 FPGFGVG-VGAEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG-VGVAPGV---GLAPGV-G 421
Query: 180 VVNAAGNVVDPATGL-PWMADLVGEFALRAPPAEQIAALAQL--SSPLGAFNTPFNTTIG 236
V G V P G+ P + G A A A ++AA AQL ++ LGA +G
Sbjct: 422 VAPGVG--VAPGVGVAPGIGP--GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 477
Query: 237 VIACDAALS-PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAA 295
V P + + + A G V + G A+ G+P
Sbjct: 478 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAANYGAAVPGVLGGLGALGG-VGIPGG 536
Query: 296 LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFG 343
+ A AAAA A+A G++ A + G+ PG G
Sbjct: 537 V---VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGG 581
^ = sptrembl|Q9NI17|Q9NI17 Merozoite surface protein 2
(Fragment).//:trembl|AF217026|AF217026_1 gene: "MSP2"; product:
"merozoite surface protein 2"; Plasmodium falciparum isolate
62-62A2 merozoite surface protein 2 (MSP2) gene, partial cds.
//:gp|AF217026|7576841 merozoite surface protein 2 [Plasmodium
falciparum]
Length = 110
0 30 60 90
| | | | |110
sptrembl|Q9NI17|Q9NI1 | __________________________________________________
Local hits (HSPs) | ______________________________________
Score = 75 (31.5 bits), Expect = 0.92, P = 0.60
Identities = 30/86 (34%), Positives = 36/86 (41%)
Query: 131 GYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL--AVVNAA---G 185
G S A AG A G G G GA A G G A A+ ++G + G AV +A G
Sbjct: 14 GASGRAGAGAG-ASGRAGAGAGAGASGRAGASGRAGASGRAGASAGSGDGAVASAGSGDG 72
Query: 186 NVVDPATGLPWMADLVGEFALRAPPA 211
V G AD G + A PA
Sbjct: 73 AVASAGNGANPGADAEGSSSTPATPA 98
^ = sptrembl|Q8VKM5|Q8VKM5 Hypothetical protein
MT0356.//:trembl|AE006941|AE006941_9 gene: "MT0356"; product:
"hypothetical protein"; Mycobacterium tuberculosis CDC1551,
section 27 of 280 of the complete genome. //:gp|AE006941|13879852
hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length = 481
0 100 200 300 400
| | | | | |481
sptrembl|Q8VKM5|Q8VKM | __________________________________________________
Local hits (HSPs) | _____________________
Score = 90 (36.7 bits), Expect = 0.97, P = 0.62
Identities = 55/213 (25%), Positives = 80/213 (37%)
Query: 131 GYSACAAAGVDVAVGT---VGVGVGARAG-ALKGGVGTASATLQSGVTVGVLAVVNAAGN 186
G++A A V VG +G G+GA+AG GGVG GV G A AG
Sbjct: 141 GFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGGQAGGVIGGSAAGAIGAG- 199
Query: 187 VVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSP 246
V G + G+ A+ A + A ++S +G +G ++ +S
Sbjct: 200 -VGGRVGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGGGLGGVGNVSGLTGVSS 258
Query: 247 AACRRIAIAAHDGLART----IRPAHTP-LDGDTVFALATGAVAVPPEAGVP-AALSPET 300
AC + GL + + A P L G G AG+ A+ T
Sbjct: 259 NACXASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAGAAGGAGLGFGAVGHPT 318
Query: 301 QLVTAVGAAA--ADCLARAVLAGVLNAQPVAGI 331
A+GAA A A A + G + AG+
Sbjct: 319 PQPAALGAAGVVAKTEAAAGVVGGVGGATAAGV 351
^ = sptrembl|Q23057|Q23057 Hypothetical 34.2 kDa
protein.//:tremblnew|U64609|CEUT28H11_1 gene: "ssq-2"; product:
"Sperm-specific family, class q protein 2"; Caenorhabditis elegans
cosmid T28H11, complete sequence. //:trembl|U64609|CEUT28H11_1
gene: "ssq-2"; product: "Sperm-specific family, class q protein 2";
Caenorhabditis elegans cosmid T28H11, complete sequence.
//:pironly|T29167|T29167 hypothetical protein T28H11.5 -
Caenorhabditis elegans//:gp|U64609|1439681 Sperm-specific family,
class q protein 2 [Caenorhabditis elegans]//:worm|CE14377|T28H11.5
locus:ssq-2 status:Partially_confirmed TR:Q23057
protein_id:AAB04598.1
Length = 405
0 90 180 270 360
| | | | | |405
sptrembl|Q23057|Q2305 | __________________________________________________
Local hits (HSPs) | _________________________________
Score = 89 (36.4 bits), Expect = 0.99, P = 0.63
Identities = 66/271 (24%), Positives = 91/271 (33%)
Query: 74 LAGGSAYGLAAAD-GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGY 132
+AGGS G +A GV G + G PG ++ + GG A Y
Sbjct: 8 VAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVY-MGAGGGGGGGGAQSAY 66
Query: 133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASAT--LQSGVTVGVLAVVNA--AGNVV 188
A A V A V +G AG GG T +A SG + + AV A + +
Sbjct: 67 FAVGGAPVGGAPAAVSIGAPPPAGG--GGASTMTALGGAPSGAST-MTAVGGAPRGASTM 123
Query: 189 DPATGLPWMADL---VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALS 245
G+P A VG A + +SP+ AF + A A +
Sbjct: 124 TAVGGVPSGASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVGGAPT 183
Query: 246 PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALA---TGAVAVPPEAGVPAALSPETQL 302
A+ A G + P T+ A+ TGA + GVP S T +
Sbjct: 184 GASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGVPTGASTMTAI 243
Query: 303 VTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
A A+ G V G PT
Sbjct: 244 GGAPSGASTMTAVGGAPRGASTMTAVGGAPT 274
^ = swiss|P40119|CBYC_ALCEU CbbY protein,
chromosomal.//:trembl|M64173|AEMCFXXYE_2 gene: "cfxYc";
Alcaligenes eutrophus chromosomal carbon dioxide fixation operon
D-ribuslose-5-phosphate 3-epimerase (cfxEc), cfxXc, and cfxYc
genes, complete cds. //:gp|M64173|304018 cfxYc [Ralstonia eutropha]
Length = 254
0 50 100 150 200 250
| | | | | |254
swiss|P40119|CBYC_ALC | __________________________________________________
Local hits (HSPs) | _____________________
Score = 86 (35.3 bits), Expect = 1.0, P = 0.64
Identities = 36/110 (32%), Positives = 42/110 (38%)
Query: 244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA-----VAVPPEAGVPAALSP 298
L P R I A GL I TP + D + GA A +AG A P
Sbjct: 97 LRPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKP 156
Query: 299 ETQLVTAV----GAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
+ AV G DCLA A L A AGIPT + P AF +
Sbjct: 157 APDVYLAVLERLGLEGGDCLAIEDSANGLRAARAAGIPTV--VTPAAFSA 204
^ = sptrembl|Q9ZB96|Q9ZB96 Hypothetical 64.9 kDa
protein.//:trembl|U17129|RS17129_6 product: "unknown"; Rhodococcus
erythropolis ThcA (thcA) gene, complete cds; and unknown genes.
//:gp|U17129|3873404 unknown [Rhodococcus erythropolis]
Length = 615
0 130 260 390 520
| | | | | |615
sptrembl|Q9ZB96|Q9ZB9 | __________________________________________________
Local hits (HSPs) | ____ _________
Score = 87 (35.7 bits), Expect = 1.1, Sum P(2) = 0.66
Identities = 40/123 (32%), Positives = 57/123 (46%)
Query: 70 DALLLAGGSAYGLAA--ADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPT 127
+ +++A GSA D +RWL+ A + + PG V P+GG P
Sbjct: 429 ELVVVATGSAARPPTYPVDDSVRWLDASE---AFGK-LTTVGPGPVALIDPLGG----PI 480
Query: 128 ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA--VVNAAG 185
A A AA GV +++ T+ VG+R GA VG + Q+GVT VLA V+ A
Sbjct: 481 AVALAEALAAEGVSISIVTLDSIVGSRLGASGDLVGANTRIQQAGVT-RVLASRVIEIAS 539
Query: 186 NVV 188
V
Sbjct: 540 GAV 542
Score = 46 (21.3 bits), Expect = 1.1, Sum P(2) = 0.66
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 30 CGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAYGLAAA 85
C T ++ P V C G ET D + A+L+ GG G+ AA
Sbjct: 303 CNQTCLVRDPRNP-VVTCVGNPSAGFETVDPDEREQISTPRAVLVVGGGPAGMEAA 357
^ = sptrembl|Q9HPL2|Q9HPL2 Vng1580h.//:trembl|AE005070|AE005070_3 gene:
"VNG1580H"; product: "Vng1580h"; Halobacterium sp. NRC-1 section
101 of 170 of the complete genome. //:pironly|C84311|C84311
hypothetical protein Vng1580h [imported] - Halobacterium sp.
NRC-1//:gp|AE005070|10581063 Vng1580h [Halobacterium sp. NRC-1]
Length = 199
0 40 80 120 160
| | | | | |199
sptrembl|Q9HPL2|Q9HPL | __________________________________________________
Local hits (HSPs) | ________________________________________________
Score = 83 (34.3 bits), Expect = 1.3, P = 0.74
Identities = 51/174 (29%), Positives = 70/174 (40%)
Query: 169 LQSGVTVGVLAVVNAAGNVVDPATG---LPWMADLVGEFALRAPPAEQIAALAQLSSPLG 225
L GV G +A A VV TG L +AD + PA++ L ++ +G
Sbjct: 2 LAGGVPHGTVAFAYLA--VVFAVTGINHLDGVADAGDAAVVHGDPADRRTVLKDTTTGVG 59
Query: 226 AFNTPFNTTIGVIACD---AALSPAACRRIAIAAHDG----LARTIRPAHTPLDG-DTVF 277
A G++ AAL + +A G +A AH P DG + F
Sbjct: 60 AIAAVVVVVAGLVTGSLGVAALPTWTAVGVVVATEVGAKTSMAAVACLAHAPHDGLGSQF 119
Query: 278 ALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI 331
A+P AGV AL P L + AAA LA AV AG L + + G+
Sbjct: 120 TGNATPGALPAVAGV--AL-P-VALASVPSPAAAGALAGAVGAGALTRRWLTGL 169
Score = 79 (32.9 bits), Expect = 3.8, P = 0.98
Identities = 42/150 (28%), Positives = 57/150 (38%)
Query: 50 GAPGTRETDLLDPANSVRFVDALLLA-GGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VP 107
G P R T L D V + A+++ G G + W VA + G
Sbjct: 42 GDPADRRTVLKDTTTGVGAIAAVVVVVAGLVTGSLGVAALPTWTAVGVV-VATEVGAKTS 100
Query: 108 IVPGAVIFDLPVGGWNCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAGALKGGVGTAS 166
+ A + P G + T + A A AGV + V V A AGAL G VG +
Sbjct: 101 MAAVACLAHAPHDGLGSQFTGNATPGALPAVAGVALPVALASVPSPAAAGALAGAVGAGA 160
Query: 167 ATLQ--SGVTVGVLAVVNAAGNVVDPATGL 194
T + +G+ G V A N V GL
Sbjct: 161 LTRRWLTGLLGGANGDVFGAVNEVSRVVGL 190
^ = sptrembl|Q93JH7|Q93JH7 Putative integral membrane
protein.//:tremblnew|AL939111|SCO939111_22 gene: "SCO1985";
"SC3C9.20c"; product: "putative integral membrane protein";
Streptomyces coelicolor A3(2) complete genome; segment 8/29
//:trembl|AL939111|SCO939111_22 gene: "SCO1985"; "SC3C9.20c";
product: "putative integral membrane protein"; Streptomyces
coelicolor A3(2) complete genome; segment 8/29
//:gp|AL939111|14571784 putative integral membrane protein
[Streptomyces coelicolor A3(2)]//:gpnew|AL939111|14571784 putative
integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 618
0 130 260 390 520
| | | | | |618
sptrembl|Q93JH7|Q93JH | __________________________________________________
Local hits (HSPs) | ____________________
Score = 90 (36.7 bits), Expect = 1.3, P = 0.74
Identities = 75/264 (28%), Positives = 98/264 (37%)
Query: 69 VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDS----GVVPIVPGAVIFDLPVGGWNC 124
+ A L+AG ++ G+ AA M R G S GV P + GA+ L VG +
Sbjct: 40 LSAALVAGRASLGVVAAIAAMLAGINDRPGSRRTSVRRIGV-PALAGAL--GLLVGTYAG 96
Query: 125 RPTADFGYSACAA-----AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
R + AG AVG V G G + + VG G VLA
Sbjct: 97 RHLGAVALTLVLTGLGLVAGCVSAVGPVASGAGTQL-LVTAAVGAGMPLPDPGWR-SVLA 154
Query: 180 VVNAAGNVVDPATGLPWMADLVGEFAL-------RAPPAEQIAALAQLSSPLGAFNTPFN 232
+ AG ++ LP + G+ L RA A+ A+A L +G +
Sbjct: 155 FLAGAGWLLLLRLVLPTPTSVTGDLRLDFRFDGERAAVADVYEAVAALLDAVGTEHAVAR 214
Query: 233 TTIGVIACD----AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
A D A P RR A AA L A PL G+ ALA AVPP
Sbjct: 215 RAALTAALDHAQDALAGPRLRRRAATAAERRLHAQYAAA-LPL-GEAATALAWAERAVPP 272
Query: 289 EAGV-PAALSPETQLVTAVGAAAA 311
AG P L+ + T G A
Sbjct: 273 RAGEGPRRLAAAVRGNTHAGPLPA 296
^ = sptrembl|Q9NI07|Q9NI07 Merozoite surface protein 2
(Fragment).//:trembl|AF217036|AF217036_1 gene: "MSP2"; product:
"merozoite surface protein 2"; Plasmodium falciparum isolate
15-70A merozoite surface protein 2 (MSP2) gene, partial cds.
//:gp|AF217036|7576861 merozoite surface protein 2 [Plasmodium
falciparum]
Length = 78
0 20 40 60
| | | | |78
sptrembl|Q9NI07|Q9NI0 | __________________________________________________
Local hits (HSPs) | _____________________________________
Score = 65 (27.9 bits), Expect = 1.4, P = 0.75
Identities = 25/67 (37%), Positives = 29/67 (43%)
Query: 126 PTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG 185
PT D G A AG A G G G GA A G ASA ++G G +A G
Sbjct: 6 PTGD-GAGASGRAGAG-ASGRAGSGAGASGSAGSGDGAVASA--RNGANPGA----DAEG 57
Query: 186 NVVDPAT 192
+ PAT
Sbjct: 58 STSTPAT 64
^ = sptrembl|Q99013|Q99013 HPLC8 protein.//:trembl|M62413|PAHPLCBB_1 gene:
"HPLC8"; P.americanus antifreeze protein gene (HPLC8), complete
cds. //:pironly|JS0705|JS0705 antifreeze protein (clones 1A-1a and
3-3a) - winter flounder//:gp|M62413|213587 HPLC8
[Pseudopleuronectes americanus]
Length = 82
0 20 40 60 80
| | | | | |82
sptrembl|Q99013|Q9901 | __________________________________________________
Local hits (HSPs) | __________________________
Score = 65 (27.9 bits), Expect = 1.4, P = 0.75
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 283 AVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVA 329
A A P A VPAA +P+T + AAAA A A A L A A
Sbjct: 29 AKAAPAAAAVPAAAAPDT--ASDAAAAAALTAANAAAAAKLTADNAA 73
^ = tremblnew|AE003714|AE003714_26 gene: "Ubx"; product: "CG10388-PD";
Drosophila melanogaster chromosome 3R, section 52 of 118 of the
complete sequence. //:trembl|AE003714|AE003714_26 gene: "Ubx";
product: "CG10388-PD"; Drosophila melanogaster chromosome 3R,
section 52 of 118 of the complete sequence. //:gp|AE003714|23171493
CG10388-PD [Drosophila melanogaster]//:gpnew|AE003714|23171493
CG10388-PD [Drosophila melanogaster]
Length = 363
0 80 160 240 320
| | | | | |363
tremblnew|AE003714|AE | __________________________________________________
Local hits (HSPs) | ________________
Score = 87 (35.7 bits), Expect = 1.4, P = 0.75
Identities = 40/129 (31%), Positives = 53/129 (41%)
Query: 76 GGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSAC 135
GG A G A + G +G +P+ P A D VGG+ T+ G S
Sbjct: 121 GGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGY--LDTS--GGSPV 176
Query: 136 AAAGVDVAVGTVGVGVG-ARAGALKGGVGTASA--TLQSGVTVGVLAVVNAAGNVVDPA- 191
+ G A G V V G AG ++ GVG A A + T+ A AA + + A
Sbjct: 177 SHRGGS-AGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQAS 235
Query: 192 --TGLPWMA 198
T PWMA
Sbjct: 236 NHTFYPWMA 244
^ = sptrembl|Q8KRX8|Q8KRX8 NbmC.//:trembl|AF521878|AF521878_3 gene: "nbmC";
product: "NbmC"; Streptomyces narbonensis desosamine biosynthetic
gene cluster, partial sequence. //:gp|AF521878|22001233 NbmC
[Streptomyces narbonensis]
Length = 448
0 90 180 270 360
| | | | | |448
sptrembl|Q8KRX8|Q8KRX | __________________________________________________
Local hits (HSPs) | __________________________
Score = 88 (36.0 bits), Expect = 1.5, P = 0.77
Identities = 63/256 (24%), Positives = 94/256 (36%)
Query: 18 LDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGG 77
L PD S A +A + P GA G P R + + +R + LLA
Sbjct: 154 LAPDPS--ASYAFELVGGFVRPAVTGAAAAVLGVPAGRRGEFAELVERLRPLSDSLLAPQ 211
Query: 78 SAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAA 137
S + AADG + L + ++GV G+ D P G + P++D S+
Sbjct: 212 SLRTVRAADGALAALT----ALLAEAGVSAATDGS---D-PSSGPSA-PSSDPSASSSGP 262
Query: 138 AGVDVAVGTVGVGVGARA-GALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPW 196
GV R GAL +G +A +G V LA++ A P
Sbjct: 263 TAPSSGPTAPSSGVAGRPDGALLSALGVTAAVQLTGNAV--LALL-AHPEQWRELCARPG 319
Query: 197 MADLVGEFALRA-PPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAAC---RRI 252
+A E LR PP + A +A++ + L P + V+ P R
Sbjct: 320 LAAAAVEETLRYDPPVQLDARVARVETELAGRRLPAGAHVVVLTAGTGRDPGVFTDPERF 379
Query: 253 AIAAHDGLAR-TIRPA 267
+A D A + PA
Sbjct: 380 DLARPDATAHLALHPA 395
^ = sptrembl|Q9KYF3|Q9KYF3 Putative membrane
protein.//:tremblnew|AL939118|SCO939118_275 gene: "SCO4117";
"SCD72A.03"; product: "putative membrane protein"; Streptomyces
coelicolor A3(2) complete genome; segment 15/29
//:trembl|AL939118|SCO939118_275 gene: "SCO4117"; "SCD72A.03";
product: "putative membrane protein"; Streptomyces coelicolor
A3(2) complete genome; segment 15/29 //:gp|AL939118|8052429
putative membrane protein [Streptomyces coelicolor
A3(2)]//:gpnew|AL939118|8052429 putative membrane protein
[Streptomyces coelicolor A3(2)]
Length = 687
0 140 280 420 560
| | | | | |687
sptrembl|Q9KYF3|Q9KYF | __________________________________________________
Local hits (HSPs) | ________
Score = 90 (36.7 bits), Expect = 1.5, P = 0.78
Identities = 32/85 (37%), Positives = 41/85 (48%)
Query: 103 SGVVPIVPGAVIFDLPVGGW-NCRPTADFGYSACAAAGVDVAV-GTVGVGVGARAGALKG 160
SG+ +VP AVI V G+ G A AAG A G G GA AGA
Sbjct: 363 SGIPAVVPVAVIGWFGVAGYAKAAGLIAGGAGAAGAAGAAAAASGGASGGAGAGAGAAAS 422
Query: 161 -GVGTASATLQSGVTVGVLAVVNAA 184
G+G A +++G+ GV+AV AA
Sbjct: 423 EGLG---APVKAGIAAGVVAVAAAA 444
Score = 88 (36.0 bits), Expect = 2.5, P = 0.92
Identities = 46/133 (34%), Positives = 59/133 (44%)
Query: 103 SGVVPIVPGAVIFDLPVGGW-NCRPTADFGYSACAAAGVDVAV-GTVGVGVGARAGALKG 160
SG+ +VP AVI V G+ G A AAG A G G GA AGA
Sbjct: 363 SGIPAVVPVAVIGWFGVAGYAKAAGLIAGGAGAAGAAGAAAAASGGASGGAGAGAGAAAS 422
Query: 161 -GVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQ 219
G+G A +++G+ GV+AV AA A L L+G+ AP E A
Sbjct: 423 EGLG---APVKAGIAAGVVAVAAAA------ALALA----LIGD---DAPGKEPPKAAPP 466
Query: 220 LSSPLG--AFNTP 230
SSP+ A +TP
Sbjct: 467 ASSPVAQPAPDTP 479
^ = sptrembl|Q93H16|Q93H16 MFS_transporter protein.//:trembl|AB070955|AB070955_2
product: "MFS_transporter protein"; Streptomyces avermitilis
peptide-6 biosynthetic gene cluster. //:gp|AB070955|15824217
MFS_transporter protein [Streptomyces avermitilis]
Length = 465
0 100 200 300 400
| | | | | |465
sptrembl|Q93H16|Q93H1 | __________________________________________________
Local hits (HSPs) | ________
Score = 88 (36.0 bits), Expect = 1.5, P = 0.79
Identities = 31/81 (38%), Positives = 40/81 (49%)
Query: 127 TADFGYSACAAAGVDVAVGT----VGVGVGARAGALKG--GV--GTASATLQSGVTVGVL 178
TAD Y A V ++VG G+ + A AG G G+ G AS TLQ G VG+
Sbjct: 357 TADGSYPALLPGIVLLSVGQGAAWTGMWIAASAGVAPGDQGIASGLASTTLQVGGAVGLA 416
Query: 179 AVVNAAGNVVDPATGLPWMAD 199
+V AG V A+G P + D
Sbjct: 417 LLVGVAGGVGQNASG-PGLLD 436
^ = sptrembl|Q9YC39|Q9YC39 Hypothetical protein
APE1412.//:trembl|AP000061|AP000061_274 gene: "APE1412"; product:
"156aa long hypothetical protein"; Aeropyrum pernix genomic DNA,
section 4/7. //:pironly|C72619|C72619 hypothetical protein APE1412
- Aeropyrum pernix (strain K1)//:gp|AP000061|5105095 156aa long
hypothetical protein [Aeropyrum pernix]
Length = 156
0 40 80 120
| | | | |156
sptrembl|Q9YC39|Q9YC3 | __________________________________________________
Local hits (HSPs) | ________________
Score = 80 (33.2 bits), Expect = 1.5, P = 0.79
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 255 AAHDGLARTIRPAHTPLDGDTVFALATGAVAV--PPEAGVPAALSPETQLVTAV 306
A + +++ + A P+ G ++A+AT + V P + G PA LSP +Q AV
Sbjct: 30 AVYAAVSKAVSAARPPITGSALYAMATTSSLVKKPLKGGTPARLSPASQNAAAV 83
^ = sptrembl|Q9I3Y4|Q9I3Y4 Hypothetical protein
PA1360.//:tremblnew|AE004565|AE004565_8 gene: "ybiF"; product:
"conserved hypothetical protein"; Pseudomonas aeruginosa PAO1,
section 126 of 529 of the complete genome.
//:trembl|AE004565|AE004565_8 gene: "PA1360"; product: "conserved
hypothetical protein"; Pseudomonas aeruginosa PA01, section 126 of
529 of the complete genome. //:pironly|A83476|A83476 conserved
hypothetical protein PA1360 [imported] - Pseudomonas aeruginosa
(strai//:gp|AE004565|9947302 conserved hypothetical protein
[Pseudomonas aeruginosa PA01] [Pseudomonas aeruginosa
PAO1]//:gpnew|AE004565|9947302 conserved hypothetical protein
[Pseudomonas aeruginosa PAO1]
Length = 297
0 60 120 180 240
| | | | | |297
sptrembl|Q9I3Y4|Q9I3Y | __________________________________________________
Local hits (HSPs) | ______________________
Score = 85 (35.0 bits), Expect = 1.7, P = 0.82
Identities = 43/146 (29%), Positives = 65/146 (44%)
Query: 117 LPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
LP+G + P G + AGV A+ + G RAGA G G A L + + V
Sbjct: 137 LPLGN-SAEPLDLVGAAYALGAGVCWALYIL---FGQRAGADHGAQGAALGVLVAAILVV 192
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT-----P- 230
+ V +A +++DPA +P +A V + P ++ AL +L P F T P
Sbjct: 193 PIGVAHAGADLLDPAL-IP-LALGVAVLSTALPYTLEMVALTRL--PARTFGTLMSIEPA 248
Query: 231 FNTTIGVIACDAALSPAACRRIAIAA 256
F G++ LSP + +AI A
Sbjct: 249 FGALSGLLFLGERLSPT--QWLAIGA 272
^ = sptrembl|Q8N160|Q8N160 Truncated non-neuronal splice variant nPTB6
(Truncated non-neuronal splice variant nPTB8)
(Fragment).//:trembl|AF530583|AF530583_1 gene: "PTBP2"; product:
"truncated non-neuronal splice variant nPTB6"; Homo sapiens
truncated non-neuronal splice variant nPTB6 (PTBP2) mRNA, partial
cds; alternatively spliced. //:trembl|AF530585|AF530585_1 gene:
"PTBP2"; product: "truncated non-neuronal splice variant nPTB8";
Homo sapiens truncated non-neuronal splice variant nPTB8 (PTBP2)
mRNA, partial cds; alternatively spliced. //:gp|AF530583|22218310
truncated non-neuronal splice variant nPTB6 [Homo
sapiens]//:gp|AF530585|22218314 truncated non-neuronal splice
variant nPTB8 [Homo sapiens]
Length = 80
0 20 40 60 80
| | | | |80
sptrembl|Q8N160|Q8N16 | __________________________________________________
Local hits (HSPs) | __________________________________
Score = 64 (27.6 bits), Expect = 1.8, P = 0.83
Identities = 22/58 (37%), Positives = 27/58 (46%)
Query: 265 RPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGV 322
+PA P FA T + +P A VP ALSP + A AAAA R + GV
Sbjct: 2 QPALDPAIA-AAFAKETSLLGLPV-AAVPGALSP-LAIPNAAAAAAAAAAGRVGMPGV 56
^ = sptrembl|Q14235|Q14235 Elastin.//:trembl|M17282|HSEL20_2 gene: "ELN";
product: "elastin"; Human elastin gene, exon 1.
//:gp|M17282|182019 elastin [Homo sapiens]
Length = 687
0 140 280 420 560
| | | | | |687
sptrembl|Q14235|Q1423 | __________________________________________________
Local hits (HSPs) | __________________________________
Score = 89 (36.4 bits), Expect = 2.0, P = 0.86
Identities = 69/259 (26%), Positives = 89/259 (34%)
Query: 98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
GV +GV P PG +P VG + +P GY A G+ G +
Sbjct: 168 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 227
Query: 149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
G G G + G G A +G VG A AA G + VG +
Sbjct: 228 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283
Query: 208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
P A+ + G TP A AA AA + G +
Sbjct: 284 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 334
Query: 268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
P G + + V P AG+P A P +V+ AAA A+A G
Sbjct: 335 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 390
Query: 328 VAGIPTY---RDMFPGAFG 343
V GIPTY FPG FG
Sbjct: 391 VGGIPTYGVGAGGFPG-FG 408
Score = 88 (36.0 bits), Expect = 2.5, P = 0.92
Identities = 70/254 (27%), Positives = 94/254 (37%)
Query: 98 GVAMDSGVVPIVPGAV-IFDLP-VGGWNCRPTADFGYSACAAAGVDVA-VGTV-GVGVGA 153
G + G +P V G + +P VGG P A AAA A G V GVGV
Sbjct: 406 GFGVGVGGIPGVAGVPSVGGVPGVGGV---PGVGISPEAQAAAAAKAAKYGLVPGVGVAP 462
Query: 154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGL-PWMADLVGEFALRAPPAE 212
G G VG A G+ GV V G V P G+ P + G A A A
Sbjct: 463 GVGVAPG-VGVAPGV---GLAPGV-GVAPGVG--VAPGVGVAPGIGP--GGVAAAAKSAA 513
Query: 213 QIAALAQL--SSPLGAFNTPFNTTIGVIACDAALS-PAACRRIAIAAHDGLARTIRPAHT 269
++AA AQL ++ LGA +GV P + + + A
Sbjct: 514 KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKA 573
Query: 270 PLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVA 329
G V + G A+ G+P + A AAAA A+A G++ A +
Sbjct: 574 AKYGAAVPGVLGGLGALGG-VGIPGGV---VGAGPAAAAAAAKAAAKAAQFGLVGAAGLG 629
Query: 330 GIPTYRDMFPGAFG 343
G+ PG G
Sbjct: 630 GLGVGGLGVPGVGG 643
Score = 87 (35.7 bits), Expect = 3.3, P = 0.96
Identities = 55/193 (28%), Positives = 68/193 (35%)
Query: 9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
G VG A A + G VLP G G G PG + PA +
Sbjct: 247 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 306
Query: 68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
A A G+A GL GV+ GV + +P+VPGA I V G
Sbjct: 307 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 366
Query: 122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVG-V 177
A + A G VG G+ G AG G GVG +GV +VG V
Sbjct: 367 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGGV 426
Query: 178 LAVVNAAGNVVDP 190
V G + P
Sbjct: 427 PGVGGVPGVGISP 439
^ = sptrembl|Q9A9F1|Q9A9F1 Hypothetical protein
CC1037.//:trembl|AE005781|AE005781_7 gene: "CC1037"; product:
"hypothetical protein"; Caulobacter crescentus CB15 section 107 of
359 of the complete genome. //:pironly|A87378|A87378 hypothetical
protein CC1037 [imported] - Caulobacter
crescentus//:gp|AE005781|13422331 hypothetical protein [Caulobacter
crescentus CB15]
Length = 563
0 120 240 360 480
| | | | | |563
sptrembl|Q9A9F1|Q9A9F | __________________________________________________
Local hits (HSPs) | _____
Score = 88 (36.0 bits), Expect = 2.0, P = 0.86
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 254 IAAHDGLARTIRPAHTPL--------DGDTVFALATGAVAVPPEAGVPAALSPETQLVT 304
+AA DG R +RP H PL G +FALA AVA+P +A A+ +PET +T
Sbjct: 13 VAAGDGGGRPLRPGHFPLRPLRGHLPPGGRIFALAL-AVALPVQAETLASRAPETVAIT 70
^ = sptrembl|Q9V7P0|Q9V7P0 CG6251 protein
(GH12838p).//:tremblnew|AE003807|AE003807_38 gene: "CG6251";
product: "CG6251-PA"; Drosophila melanogaster chromosome 2R,
section 43 of 74 of the complete sequence.
//:trembl|AE003807|AE003807_41 gene: "CG6251"; product:
"CG6251-PA"; Drosophila melanogaster chromosome 2R, section 43 of
74 of the complete sequence. //:trembl|AY094707|AY094707_1 gene:
"CG6251"; product: "GH12838p"; Drosophila melanogaster GH12838
full insert cDNA. //:gp|AY094707|20151401 GH12838p [Drosophila
melanogaster]//:gp|AE003807|7302936 CG6251-PA [Drosophila
melanogaster]//:gpnew|AE003807|7302936 CG6251-PA [Drosophila
melanogaster]
Length = 394
0 80 160 240 320
| | | | | |394
sptrembl|Q9V7P0|Q9V7P | __________________________________________________
Local hits (HSPs) | ___________________
Score = 86 (35.3 bits), Expect = 2.0, P = 0.87
Identities = 45/158 (28%), Positives = 57/158 (36%)
Query: 146 TVGVGVG----ARAGALKG-GVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADL 200
T G+G G ++A A G G S T + +T+G A N A ATG
Sbjct: 56 TAGIGGGDADNSKAQAPPAFGFGLGSGTASAPLTLGTQAAANPASTTSATATGTSAAPPA 115
Query: 201 VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT--IGVIACDAALSPAACRRIAIAAHD 258
G F A PA + S+P NT TT +G A + AA AA
Sbjct: 116 FGGFT--AQPAASVVPTIATSAP----NTAATTTGLLGGSGLGAPKTTAAASTTLTAAPS 169
Query: 259 GLARTIRPAHTP-LDGDTVFALATGAVAVPPEAGVPAA 295
+A T A P L FA T + V A
Sbjct: 170 AIASTQGAAPAPTLSTGGAFANLTTETKTTDSSAVSTA 207
^ = sptrembl|Q9PEK3|Q9PEK3 Hypothetical protein
Xf1025.//:trembl|AE003939|AE003939_14 gene: "XF1025"; product:
"hypothetical protein"; Xylella fastidiosa 9a5c, section 85 of 229
of the complete genome. //:pironly|E82734|E82734 hypothetical
protein XF1025 [imported] - Xylella fastidiosa (strain
9a5c)//:gp|AE003939|9105963 hypothetical protein [Xylella
fastidiosa 9a5c]
Length = 127
0 30 60 90 120
| | | | | |127
sptrembl|Q9PEK3|Q9PEK | __________________________________________________
Local hits (HSPs) | ______________________________
Score = 76 (31.8 bits), Expect = 2.1, P = 0.87
Identities = 23/59 (38%), Positives = 27/59 (45%)
Query: 131 GYSACAAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSGVTVGVLAVVNAAGNVV 188
G GV V VG VGVGVG G G GVG + +G + A VNA +V
Sbjct: 32 GVGVGVGVGVGVGVG-VGVGVGVGVGVGVGVGVGVGVSERTNGSPQALKAAVNADAKIV 89
Score = 72 (30.4 bits), Expect = 7.0, P = 1.0
Identities = 26/66 (39%), Positives = 28/66 (42%)
Query: 131 GYSACAAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSGVTVGVLAVVNAAGNVVD 189
G GV V VG VGVGVG G G GVG + GV VGV V V +
Sbjct: 12 GVGVGVGVGVGVGVG-VGVGVGVGVGVGVGVGVGVGVG-VGVGVGVGVGVGVGVGVGVSE 69
Query: 190 PATGLP 195
G P
Sbjct: 70 RTNGSP 75
WARNING: HSPs involving 59 database sequences were not reported due to the
limiting value of parameter B = 100.
Parameters:
matrix=BLOSUM62
E=10
V=250
B=100
hspmax=10
filter=none
echofilter
stats
qtype
qres
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 344 344 10. 81 3 11 22 0.20 34
33 0.22 37
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 71 (32.7 bits) 1768 (814.4 bits) 226 151
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 6697 164894697 37001824 127616477 276396 6137
Database: /dove2/data/db/nrdb95
Title: nrdb-95%
Release date: unknown
Posted date: 11:14:02 AM MET Mar 21, 2003
Last modified: unknown
First created: unknown
Format: BLAST-1.4
# of letters in database: 229,823,634
# of sequences in database: 701,238
# of database sequences satisfying E: 159
No. of states in DFA: 563 (110 KB)
Total size of DFA: 249 KB (256 KB)
Time to generate neighborhood: 0.03u 0.00s 0.03t Elapsed: 00:00:00
No. of threads or processors used: 4
Search cpu time: 237.09u 3.63s 240.72t Elapsed: 00:01:02
Total cpu time: 237.41u 3.76s 241.17t Elapsed: 00:01:04
Start: Tue Apr 1 12:00:18 2003 End: Tue Apr 1 12:01:22 2003
WARNINGS ISSUED: 1
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