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BLASTP 2.2.5 [Nov-16-2002] 

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


RID: 1049131448-024420-23059


Query= 
         (344 letters)



Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,393,205 sequences; 448,689,247 total letters


 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs

Taxonomy reports

Distribution of 23 Blast Hits on the Query Sequence

hypothetical protein [Chloroflexus aurantiacus]..S= 100 E=3e-20"" onmouseout="document.forms[1].defline.value="Mouse-over to show defline and scores. Click to show alignments""> hypothetical protein [Rhodopseudomonas palustris]..S=90.5 E=4e-17"" onmouseout="document.forms[1].defline.value="Mouse-over to show defline and scores. Click to show alignments""> hypothetical protein [Magnetospirillum magnetotacticu..S=57.8 E=3e-07"" onmouseout="document.forms[1].defline.value="Mouse-over to show defline and scores. Click to show alignments""> 

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15608473|ref|NP_215849.1|  hypothetical protein Rv1333 [M...   367   e-100 
gi|15827589|ref|NP_301852.1|  possible hydrolase [Mycobacter...   289   5e-77 
gi|17989243|ref|NP_541876.1|  ENDO-TYPE 6-AMINOHEXANOATE OLI...   108   1e-22 
gi|23500102|ref|NP_699542.1|  conserved hypothetical protein...   107   2e-22 
gi|20808213|ref|NP_623384.1|  L-aminopeptidase/D-esterase [T...   105   9e-22 
gi|22971282|gb|ZP_00018257.1|  hypothetical protein [Chlorof...   100   3e-20 
gi|25028963|ref|NP_739017.1|  conserved hypothetical protein...    96   8e-19 
gi|15965508|ref|NP_385861.1|  CONSERVED HYPOTHETICAL PROTEIN...    96   1e-18 
gi|13470389|ref|NP_101957.1|  hypothetical protein [Mesorhiz...    95   2e-18 
gi|21325284|dbj|BAB99906.1|  L-aminopeptidase/D-esterase [Co...    94   3e-18 
gi|19553713|ref|NP_601715.1|  L-aminopeptidase/D-esterase [C...    94   4e-18 
gi|27380789|ref|NP_772318.1|  blr5678 [Bradyrhizobium japoni...    93   5e-18 
gi|22961028|gb|ZP_00008634.1|  hypothetical protein [Rhodops...    91   4e-17 
gi|21221628|ref|NP_627407.1|  conserved hypothetical protein...    89   1e-16 
gi|17936440|ref|NP_533230.1|  conserved hypothetical protein...    83   6e-15 
gi|15889823|ref|NP_355504.1|  AGR_C_4649p [Agrobacterium tum...    82   9e-15 
gi|16126426|ref|NP_420990.1|  conserved hypothetical protein...    73   8e-12 
gi|18310404|ref|NP_562338.1|  conserved hypothetical protein...    73   8e-12 
gi|23009700|gb|ZP_00050653.1|  hypothetical protein [Magneto...    58   3e-07 
gi|15898366|ref|NP_342971.1|  Conserved hypothetical protein...    44   0.003 
gi|15805808|ref|NP_294506.1|  conserved hypothetical protein...    42   0.013 
gi|423943|pir||A47039  nylon oligomer-degrading enzyme EIII ...    41   0.027 



Alignments



>gi|15608473|ref|NP_215849.1|   hypothetical protein Rv1333 [Mycobacterium tuberculosis H37Rv]
 gi|15840788|ref|NP_335825.1|   conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
 gi|1722985|sp|Q10644|YD33_MYCTU   Hypothetical protein Rv1333
 gi|7478142|pir||A70771   probable hydrolase - Mycobacterium tuberculosis (strain H37RV)
 gi|1340099|emb|CAA98097.1|   hypothetical protein Rv1333 [Mycobacterium tuberculosis H37Rv]
 gi|13880983|gb|AAK45639.1|   conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
          Length = 344

 Score =  367 bits (943), Expect = e-100
 Identities = 232/344 (67%), Positives = 232/344 (67%)

Query: 1   MNSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLL 60
           MNSITDVGGIRVGHYQRLDPDASLGAGWAC               DCRGGAPGTRETDLL
Sbjct: 1   MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60

Query: 61  DPANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
           DPANSVRFVD                 VMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG
Sbjct: 61  DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120

Query: 121 GWNCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXXXXX 180
           GWNCRPTADFGYSAC                            TASATLQS         
Sbjct: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180

Query: 181 XXXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
                   DPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC
Sbjct: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240

Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALXXXXXXXXXXXXXXXXLSPET 300
           DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL                LSPET
Sbjct: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300

Query: 301 QXXXXXXXXXXXXXXXXXXXGVLNAQPVAGIPTYRDMFPGAFGS 344
           Q                   GVLNAQPVAGIPTYRDMFPGAFGS
Sbjct: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344





>gi|15827589|ref|NP_301852.1|   possible hydrolase [Mycobacterium leprae]
 gi|1722984|sp|P53425|YD33_MYCLE   Hypothetical protein ML1167
 gi|2145674|pir||S72794   hypothetical protein B1549_C2_208 - Mycobacterium leprae
 gi|466914|gb|AAA50889.1|   B1549_C2_208 [Mycobacterium leprae]
 gi|13093140|emb|CAC31548.1|   possible hydrolase [Mycobacterium leprae]
          Length = 362

 Score =  289 bits (739), Expect = 5e-77
 Identities = 182/352 (51%), Positives = 196/352 (55%), Gaps = 12/352 (3%)

Query: 1   MNSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLL 60
           MNSITD+ GI+VGHY RLDPDASLGAGWAC               DCRGG PGTRETDLL
Sbjct: 8   MNSITDISGIQVGHYHRLDPDASLGAGWACGVTVVLTPPGTVGAVDCRGGVPGTRETDLL 67

Query: 61  DPANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
           DPANSVRFVD                 VMRWLEEH RGV M  GVVPIVPGAVIFDL VG
Sbjct: 68  DPANSVRFVDAVLLAGGSAYGLAAADGVMRWLEEHERGVVMLGGVVPIVPGAVIFDLSVG 127

Query: 121 GWNCRPTADFGYSAC--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSX 172
            ++CRPTA+FGY AC                                    TAS TL+S 
Sbjct: 128 DFHCRPTAEFGYLACQAAYDAAVGGQDATVAVGTVGAGVGARAGVLKGGVGTASITLESG 187

Query: 173 XXXXXXXXXXXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
                           D ATGLPWM DL+ EFALR P  EQIA  AQL SPL A     N
Sbjct: 188 PTVGAVVVVNSVGDVVDRATGLPWMTDLIDEFALRPPSPEQIAGFAQLKSPLSA----LN 243

Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALXXXXXXXXXXXXX 292
           TTIGV+A DA LSPAAC+R+A+AA DGLARTIRPAHT LDGDTVFAL             
Sbjct: 244 TTIGVVATDATLSPAACQRVAMAAQDGLARTIRPAHTALDGDTVFALATGAVEATATADV 303

Query: 293 XXXLSPETQXXXXXXXXXXXXXXXXXXXGVLNAQPVAGIPTYRDMFPGAFGS 344
              +SPET                     VL A+ VAGIPTY  MFPGAFG+
Sbjct: 304 PVAMSPETGLITEVGAAADDCLARAVLVAVLAAESVAGIPTYCGMFPGAFGT 355





>gi|17989243|ref|NP_541876.1|   ENDO-TYPE 6-AMINOHEXANOATE OLIGOMER HYDROLASE [Brucella melitensis]
 gi|25375727|pir||AI3621   endo-type 6-aminohexanoate oligomer hydrolase [imported] - Brucella
           melitensis (strain 16M)
 gi|17985104|gb|AAL54140.1|   ENDO-TYPE 6-AMINOHEXANOATE OLIGOMER HYDROLASE [Brucella melitensis
           16M]
          Length = 335

 Score =  108 bits (271), Expect = 1e-22
 Identities = 94/291 (32%), Positives = 117/291 (40%), Gaps = 32/291 (10%)

Query: 3   SITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDP 62
           SITDV GI++GH+                              D RG APGTRETDLLDP
Sbjct: 8   SITDVPGIKLGHHTLTRRPTGCSV--------LLCEEGATAGVDVRGSAPGTRETDLLDP 59

Query: 63  ANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
            N V+ V                  VMR+LEE+  G  +  GVVPIVP A++ DL VG +
Sbjct: 60  INFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGDF 119

Query: 123 NCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXXXXXXX 182
           + RP  + GY AC                             A                 
Sbjct: 120 SVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYA--------MKGGLGTAS 171

Query: 183 XXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT------------- 229
                 +   G     + VG+  +RAP + +I A A+     G  NT             
Sbjct: 172 YKVPGTEIVVGAIVAVNAVGD--VRAPNSHRILAGARTEDGKGFRNTMAAIMQGHGVVKS 229

Query: 230 -PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
              NTTIG IA +A    A  ++IA  AHDG ARTI P HT  DGDT+FAL
Sbjct: 230 GGANTTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFAL 280





>gi|23500102|ref|NP_699542.1|   conserved hypothetical protein [Brucella suis 1330]
 gi|23463695|gb|AAN33547.1|AE014534_9   conserved hypothetical protein [Brucella suis 1330]
          Length = 368

 Score =  107 bits (268), Expect = 2e-22
 Identities = 94/291 (32%), Positives = 117/291 (40%), Gaps = 32/291 (10%)

Query: 3   SITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDP 62
           SITDV GI++GH+                              D RG APGTRETDLLDP
Sbjct: 41  SITDVPGIKLGHHTLTRRPTGCSV--------LLCEEGATAGVDVRGSAPGTRETDLLDP 92

Query: 63  ANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
            N V+ V                  VMR+LEE+  G  +  GVVPIVP A++ DL VG +
Sbjct: 93  INFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGDF 152

Query: 123 NCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXXXXXXX 182
           + RP  + GY AC                             A                 
Sbjct: 153 SVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYA--------MKGGLGTAS 204

Query: 183 XXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT------------- 229
                 +   G     + VG+  +RAP + +I A A+     G  NT             
Sbjct: 205 YKVPGTEIVVGAIVAVNAVGD--VRAPNSHRILAGARTEDGKGFRNTMAAIMQGHGVVKS 262

Query: 230 -PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
              NTTIG IA +A    A  ++IA  AHDG ARTI P HT  DGDT+FAL
Sbjct: 263 GGANTTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFAL 313





>gi|20808213|ref|NP_623384.1|   L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
 gi|20516808|gb|AAM24988.1|   L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
          Length = 324

 Score =  105 bits (263), Expect = 9e-22
 Identities = 87/285 (30%), Positives = 119/285 (41%), Gaps = 23/285 (8%)

Query: 4   ITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDPA 63
           I ++ GI+VG+ + ++      AG  C               D RGGAPGTRETDL+   
Sbjct: 8   IKEIEGIKVGNAENVE------AGTGC--TVVICEEGATPGVDVRGGAPGTRETDLIRSE 59

Query: 64  NSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVGG 121
           N V  +                  VMR+LEE  +G+  D+GV  +PIV  A++FDL VG 
Sbjct: 60  NLVEKIHAVVLAGGSAFGLDAASGVMRYLEE--KGIGFDTGVLKIPIVASAILFDLAVGN 117

Query: 122 WNCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASAT------LQS-XXX 174
              RP  + GY AC                             A  +      LQ+    
Sbjct: 118 PYIRPDFEMGYKACVNAEKGEFTYGNKGAGTGASVGKFLGIKRAMKSGLGCYALQAGELK 177

Query: 175 XXXXXXXXXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
                         DP TG   +A L+ E   +    E+ A +  +      F    NTT
Sbjct: 178 VGAVVAVNALGDVFDPETG-EVIAGLLDEKGEKIISTEE-AIIENIGREKSVFRN--NTT 233

Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           IGV+  +A LS A   ++A  AHDG AR I+P HT  DGDT+F +
Sbjct: 234 IGVVITNAMLSKAEANKVASMAHDGYARAIKPVHTMFDGDTIFVM 278





>gi|22971282|gb|ZP_00018257.1|   hypothetical protein [Chloroflexus aurantiacus]
          Length = 354

 Score =  100 bits (249), Expect = 3e-20
 Identities = 101/288 (35%), Positives = 118/288 (40%), Gaps = 27/288 (9%)

Query: 3   SITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDP 62
           +IT V G+ VG  Q  D DA  G                    D RGGAPGTRETDLL+P
Sbjct: 39  AITAVQGVLVG--QVADQDALTGV------TVVLTPNGATAGVDVRGGAPGTRETDLLNP 90

Query: 63  ANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVG 120
            N V+ V                  V+ WL  H RG   D G+  VPIVP AVIFDL +G
Sbjct: 91  VNLVQQVHAVVLTGGSAFGLAAATGVVSWL--HERGYGFDVGLTKVPIVPAAVIFDLGIG 148

Query: 121 GWNCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXXXXX 180
             +  P A  GY+AC                                 + S         
Sbjct: 149 RSDVWPDATMGYAACMAAEAAVAEGSVGAGIGATVGKVGGMATAMRGGVGSWSETLADGV 208

Query: 181 XXXXXXXXDPATGLPWMADLVGEF-----ALRAPPAEQIAALAQLSSPLG----AFNTPF 231
                   +         D+V +        RAP    I   A L S L     A  T  
Sbjct: 209 TVGALAVVNA------FGDVVDDHGRIIAGARAPDQSLIGTSALLRSGLSRRSFADTTGQ 262

Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           NTTI V+A DA L  AA  R+A+ A DGLAR IRPAH+P DGDTVFAL
Sbjct: 263 NTTIAVVATDARLDKAAATRLAMMAQDGLARAIRPAHSPFDGDTVFAL 310





>gi|25028963|ref|NP_739017.1|   conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|23494250|dbj|BAC19217.1|   conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 317

 Score = 95.9 bits (237), Expect = 8e-19
 Identities = 88/283 (31%), Positives = 115/283 (40%), Gaps = 29/283 (10%)

Query: 4   ITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDPA 63
           + DV GI +GH    D   ++                     D RGG PGTRETDLL+P 
Sbjct: 8   LCDVPGIHLGHVTSGDTGVTV----------VVAPGGAFAGVDVRGGGPGTRETDLLEPH 57

Query: 64  NSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAM-----DSGVVPIVPGAVIFDLP 118
           N+V+ V                  VM  LEE   G  +        +VPIVP AVIFDL 
Sbjct: 58  NTVQQVHAVALCGGSAYGLAAADGVMYALEERGIGFPVLGPDRPGPIVPIVPAAVIFDLL 117

Query: 119 VGGWNCRPTADFGYSAC--XXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXX 176
           VG    RPT + G +A                                 ++T        
Sbjct: 118 VGDPTNRPTREHGLTAVDHALAGRQREVSGSIGAGTGATAGHLRGGFGQASTTVGEFVVA 177

Query: 177 XXXXXXXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIG 236
                       DP TG  + A           PA  +  LA +  P        NTTIG
Sbjct: 178 AGIVANPVGEVVDPTTGTLYGAP--------GRPAVDVDKLAAVPHPAA----DLNTTIG 225

Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           VIA +A ++ A  +R+A+  HDGLAR +RP+H+P+DGDT+FAL
Sbjct: 226 VIATNAPVTKAQAKRLALTGHDGLARAVRPSHSPMDGDTLFAL 268





>gi|15965508|ref|NP_385861.1|   CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
 gi|15074689|emb|CAC46334.1|   CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
          Length = 334

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 94/287 (32%), Positives = 114/287 (39%), Gaps = 19/287 (6%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N ITDV G+ VG+ + +   + + A                      GGAPGTRETDLL 
Sbjct: 7   NLITDVPGLLVGNAEDIRLKSGVTA--------VLCDPPATAAVQVLGGAPGTRETDLLA 58

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
           P N+V+ VD                 V   L E  RG A+    VPIVP A++FDL  GG
Sbjct: 59  PHNTVQAVDAIVLSGGSAFGLDAASGVQAALREMGRGFAVGPHRVPIVPAAILFDLANGG 118

Query: 122 ---W-NCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXX 177
              W    P  D GY A                             +AS  L +      
Sbjct: 119 DKDWGRYAPYRDLGYQAARAVSADFGTGSTGAGTGALTATFKGGLGSASTVLSNGITVGA 178

Query: 178 XXXXXXXXXXXDPATGLPW-----MADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
                         T   W     M D  G      P  +  AA         A  T  N
Sbjct: 179 LVAVNAIGSATVGDTRHFWAAPFEMDDEFGGLGQPTPWPQDAAAPRFKFRERQASAT--N 236

Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           TTI VIA DA L+ A  +R+AIAAHDG +R + P+HTPLDGD VFAL
Sbjct: 237 TTIAVIATDALLTKAEAKRLAIAAHDGFSRALWPSHTPLDGDLVFAL 283





>gi|13470389|ref|NP_101957.1|   hypothetical protein [Mesorhizobium loti]
 gi|14021130|dbj|BAB47743.1|   hypothetical protein [Mesorhizobium loti]
          Length = 341

 Score = 94.7 bits (234), Expect = 2e-18
 Identities = 93/290 (32%), Positives = 112/290 (38%), Gaps = 20/290 (6%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N ITDV G+RVG+      DA L +G                     GGAPGTRETDLL+
Sbjct: 8   NLITDVAGLRVGN----SSDARLKSG----VTTILCDEPAVAGVQILGGAPGTRETDLLE 59

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
           P NS+  +                  V   L E   G  +    VPIVP A++FDL  GG
Sbjct: 60  PHNSIEAIHAVVLSGGSAFGLDAASGVQAALRERGVGFEVGGFRVPIVPAAILFDLRNGG 119

Query: 122 ---W-NCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXX 177
              W    P  D GY A                             +AS  L +      
Sbjct: 120 DKDWGRYPPYRDLGYEAAQSAATDFQLGTVGAGTGALTAGLKGGLGSASTLLDTGVTIGA 179

Query: 178 XXXXXXXXXXXDPATGLPWMA-----DLVGEFALRAP-PAEQIAALAQLSSPLGA--FNT 229
                         T   W A     D  G     +P PA+    L +           T
Sbjct: 180 LAAVNPTGSVTVGRTRHLWAAPFEIGDEFGGLGYPSPMPADAKEILLKYRDKHAGKQMET 239

Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
             NTTI VIA DA L+ AA +R+A++AHDG  R I P HTP DGD VFAL
Sbjct: 240 GGNTTIAVIATDAVLTKAAAKRLAMSAHDGFVRAIWPTHTPADGDLVFAL 289





>gi|21325284|dbj|BAB99906.1|   L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
          Length = 320

 Score = 94.4 bits (233), Expect = 3e-18
 Identities = 88/278 (31%), Positives = 113/278 (40%), Gaps = 26/278 (9%)

Query: 4   ITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDPA 63
           + DV G  +GH  + D   S+                     D RGG PGTRETDLL+P 
Sbjct: 18  LIDVAGFLLGHVTKGDTGCSV----------VIAPNGAFAGVDVRGGGPGTRETDLLEPH 67

Query: 64  NSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRG--VAMDSGVVPIVPGAVIFDLPVGG 121
           NSV+                    VM  LE    G  V  +  +VPIVPGAVIFDL VG 
Sbjct: 68  NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 127

Query: 122 WNCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXXXXXX 181
              RPTA  G  A                               +  L+           
Sbjct: 128 PKNRPTAADGEQAV---------ENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRVG 178

Query: 182 XXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
                    A  +  + DL    AL   P      + +L S     N    TTIGV+A D
Sbjct: 179 KYTIAAGVVANPVGEVVDLTTG-ALFGRPEVMGVGVDKLKSAAETLN----TTIGVVATD 233

Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           A ++ A  +R+A+ AHDGLAR +RP+H+P+DGDT FA+
Sbjct: 234 APVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAM 271





>gi|19553713|ref|NP_601715.1|   L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
          Length = 304

 Score = 93.6 bits (231), Expect = 4e-18
 Identities = 88/278 (31%), Positives = 113/278 (40%), Gaps = 26/278 (9%)

Query: 4   ITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDPA 63
           + DV G  +GH  + D   S+                     D RGG PGTRETDLL+P 
Sbjct: 2   LIDVAGFLLGHVTKGDTGCSV----------VIAPNGAFAGVDVRGGGPGTRETDLLEPH 51

Query: 64  NSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRG--VAMDSGVVPIVPGAVIFDLPVGG 121
           NSV+                    VM  LE    G  V  +  +VPIVPGAVIFDL VG 
Sbjct: 52  NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 111

Query: 122 WNCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXXXXXX 181
              RPTA  G  A                               +  L+           
Sbjct: 112 PKNRPTAADGEQAV---------ENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRVG 162

Query: 182 XXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
                    A  +  + DL    AL   P      + +L S     N    TTIGV+A D
Sbjct: 163 KYTIAAGVVANPVGEVVDLTTG-ALFGRPEVMGVGVDKLKSAAETLN----TTIGVVATD 217

Query: 242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           A ++ A  +R+A+ AHDGLAR +RP+H+P+DGDT FA+
Sbjct: 218 APVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAM 255





>gi|27380789|ref|NP_772318.1|   blr5678 [Bradyrhizobium japonicum]
 gi|27353954|dbj|BAC50943.1|   blr5678 [Bradyrhizobium japonicum USDA 110]
          Length = 332

 Score = 93.2 bits (230), Expect = 5e-18
 Identities = 85/284 (29%), Positives = 114/284 (40%), Gaps = 15/284 (5%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N +TD+ G+RVGH +    DA + +G                  D RGG PGTRE  LLD
Sbjct: 3   NLLTDIAGVRVGHAE----DAKVASG----TTAIIFDSPAVAAIDVRGGGPGTREDALLD 54

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
            AN+V  VD                 V  WL E  RG  +   ++PIVPGA++FDL  GG
Sbjct: 55  LANTVERVDAIALSGGSAFGLDTGGGVQAWLAEQGRGHRVREALIPIVPGAILFDLLNGG 114

Query: 122 ---W-NCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXX 177
              W    P  D GY+A                             +ASA          
Sbjct: 115 DKAWGRFSPYRDLGYAAAAAAGTDFAIGSVGAGLGATTATFKGGLGSASAVTPDGVKVAA 174

Query: 178 XXXXXXXXXXXDPATGLPWMA--DLVGEFALRAPPAEQIAALAQLSSPLG-AFNTPFNTT 234
                             W A  ++ GE+  R  P +    + ++    G A +   NTT
Sbjct: 175 IVAVNAVGSVTVGNGPWFWAAPFEVDGEYGGRGLPDKFTDDMLRMRIKGGPAASARENTT 234

Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
           IG +  DA L+    +R+A+ AH G AR I P H P DGD ++A
Sbjct: 235 IGAVVTDAVLTKPQAKRLAMIAHTGFARAIYPVHAPTDGDVLYA 278





>gi|22961028|gb|ZP_00008634.1|   hypothetical protein [Rhodopseudomonas palustris]
          Length = 358

 Score = 90.5 bits (223), Expect = 4e-17
 Identities = 86/284 (30%), Positives = 107/284 (37%), Gaps = 15/284 (5%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N ITDV G+RVGH      D  L +G                  D RGG PG R+  LL+
Sbjct: 27  NLITDVAGVRVGHAH----DHKLASG----VTAILFDKPAVASIDVRGGGPGIRDGALLE 78

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
           P N+V  +D                 V  WL E  RG A+ +  +PIVPGAV+FD+  GG
Sbjct: 79  PVNTVEQIDGFTLSGGSAFGLDSGGGVQAWLAERGRGFAIGNATIPIVPGAVVFDMINGG 138

Query: 122 ---W-NCRPTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXX 177
              W    P  D GY+A                             +ASAT         
Sbjct: 139 DKAWGRFSPYRDLGYAAADAAGDSFALGSVGAGLGATTATLKGGLGSASATTPGGVTVGA 198

Query: 178 XXXXXXXXXXXDPATGLPWMADLV--GEF-ALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
                             W A     GEF  L  P +     L        A +   NTT
Sbjct: 199 IAVVNAIGSATIGDGPWFWSAPFEQDGEFGGLGMPESFTPDMLKVRLKGAAAASAIENTT 258

Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
           +  +  DA L+    +R+A+ A  G AR I P H PLDGD VFA
Sbjct: 259 LVAVVTDANLTKPQVKRLAMLAQTGFARAIYPVHAPLDGDVVFA 302





>gi|21221628|ref|NP_627407.1|   conserved hypothetical protein SCE22.10 [Streptomyces coelicolor
           A3(2)]
 gi|7799513|emb|CAB90977.1|   conserved hypothetical protein SCE22.10 [Streptomyces coelicolor
           A3(2)]
          Length = 348

 Score = 89.0 bits (219), Expect = 1e-16
 Identities = 96/291 (32%), Positives = 123/291 (42%), Gaps = 19/291 (6%)

Query: 1   MNSITDVGGIRVGHYQRLDPDASLGAGWAC-XXXXXXXXXXXXXXXDCRGGAPGTRETDL 59
           ++++TDV G+ VGH  R       G GW                  D RGG PGT+ETD 
Sbjct: 3   VDALTDVAGLLVGHATR------TGDGWLTGTTVVLAPEGGAVAGVDVRGGGPGTKETDA 56

Query: 60  LDPANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMD---SGVVPIVPGAVIFD 116
           LDP N V+ V                  VM WLEE  RGV +    + VVP+VP A +FD
Sbjct: 57  LDPRNLVQKVQAVVLTGGSAYGLDAASGVMAWLEERGRGVRVGPDPAHVVPVVPAACVFD 116

Query: 117 LPVGG-WNCRPTADFGY-----SACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQ 170
           L  GG +  RP A  GY     +                              TAS  L 
Sbjct: 117 LGRGGDFRARPDAVTGYAAVAAAHASAPGAAVAEGCVGAGTGAVVGALKGGVGTASTVLD 176

Query: 171 SXXXXXXXXXXXXXXXXXDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT- 229
           S                 DP TG+ +  +L     +  P  E   A  +  + + A N  
Sbjct: 177 SGITVAALVVANAAGSVTDPETGVLY-GELFRGGRVEYPAPEVHEAAGRRLAEVAARNAP 235

Query: 230 -PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
            P NTT+ V+A DA LS A  +++A  AHDG+AR +RP H   DGDTVFAL
Sbjct: 236 PPLNTTLAVVATDAGLSKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFAL 286





>gi|17936440|ref|NP_533230.1|   conserved hypothetical protein [Agrobacterium tumefaciens str. C58
           (U. Washington)]
 gi|25375726|pir||AD2891   conserved hypothetical protein Atu2565 [imported] - Agrobacterium
           tumefaciens (strain C58, Dupont)
 gi|17741058|gb|AAL43546.1|   conserved hypothetical protein [Agrobacterium tumefaciens str. C58
           (U. Washington)]
          Length = 334

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 86/284 (30%), Positives = 112/284 (39%), Gaps = 18/284 (6%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N +TD+ GI VG+      D SLG+G                     GGAPG R+T LLD
Sbjct: 6   NLLTDIDGILVGNVT----DLSLGSG----VTAIVFEKPAVASGSVLGGAPGGRDTGLLD 57

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
           P+ +V  VD                 V   L E  RG+ + S  VPIVP A++ D+  GG
Sbjct: 58  PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 117

Query: 122 ---WNCR-PTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXX 177
              W    P  + GY+A                              +++ + S      
Sbjct: 118 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 177

Query: 178 XXXXXXXXXXXDPATGLP-WMA--DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
                         T    W A  ++ GEF     PA   A    L   L   N    TT
Sbjct: 178 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALR--LKGVNLT-ATT 234

Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
           IG +  DA L+ A   R++I AHDGLAR + PAH P DGDT+FA
Sbjct: 235 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFA 278





>gi|15889823|ref|NP_355504.1|   AGR_C_4649p [Agrobacterium tumefaciens]
 gi|25375725|pir||H97666   hypothetical 33.9K protein rv1333 [imported] - Agrobacterium
           tumefaciens (strain C58, Cereon)
 gi|15157757|gb|AAK88289.1|   AGR_C_4649p [Agrobacterium tumefaciens str. C58 (Cereon)]
          Length = 355

 Score = 82.4 bits (202), Expect = 9e-15
 Identities = 86/284 (30%), Positives = 112/284 (39%), Gaps = 18/284 (6%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N +TD+ GI VG+      D SLG+G                     GGAPG R+T LLD
Sbjct: 27  NLLTDIDGILVGNVT----DLSLGSG----VTAIVFEKPAVASGSVLGGAPGGRDTGLLD 78

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
           P+ +V  VD                 V   L E  RG+ + S  VPIVP A++ D+  GG
Sbjct: 79  PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 138

Query: 122 ---WNCR-PTADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQSXXXXXX 177
              W    P  + GY+A                              +++ + S      
Sbjct: 139 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 198

Query: 178 XXXXXXXXXXXDPATGLP-WMA--DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
                         T    W A  ++ GEF     PA   A    L   L   N    TT
Sbjct: 199 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALR--LKGVNLT-ATT 255

Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
           IG +  DA L+ A   R++I AHDGLAR + PAH P DGDT+FA
Sbjct: 256 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFA 299





>gi|16126426|ref|NP_420990.1|   conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|25375720|pir||B87520   conserved hypothetical protein CC2187 [imported] - Caulobacter
           crescentus
 gi|13423688|gb|AAK24158.1|   conserved hypothetical protein [Caulobacter crescentus CB15]
          Length = 330

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 84/291 (28%), Positives = 109/291 (37%), Gaps = 24/291 (8%)

Query: 2   NSITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLD 61
           N ITDV G++VG  +    D ++  G                  D RGG P  RETD L 
Sbjct: 8   NLITDVPGLKVGCVE----DEAVRTG----VTVVLCPEAWTAAVDVRGGGPAVRETDTLR 59

Query: 62  PANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
           P NS                      V   L     G+ + +G   +PIVP A + DL  
Sbjct: 60  PENSFSKAHAICFSGGSVFGLGAADGVASALSNRDVGLRITAGTPAIPIVPAACLHDLSN 119

Query: 120 GG---WNCRPT-ADFGYSACXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASATLQS--XX 173
           GG   W   P     G  A                             +AS  L      
Sbjct: 120 GGDKAWGLTPPYRALGMKAVEAAGEDFPLGPVGAGRGAMAGLRPGGLGSASLDLGDGLIV 179

Query: 174 XXXXXXXXXXXXXXXDPATGLPWMADLVGEFALR-----APPAEQIAALAQLSSPLGAFN 228
                          D  T   W  ++ GEF  R     AP  E +   ++L + L A  
Sbjct: 180 AALVAANPVGSAYMADGETFWAWPFEIDGEFGGRRPGTMAPAIEPLPDDSKLGARLAA-- 237

Query: 229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
              NTT+ ++A  A LS A  +R+A+ AHDG+AR +RP HTP DGD VFAL
Sbjct: 238 -GANTTLALVATTADLSTAEAQRMAMMAHDGMARAVRPCHTPFDGDVVFAL 287





>gi|18310404|ref|NP_562338.1|   conserved hypothetical protein [Clostridium perfringens]
 gi|18145084|dbj|BAB81128.1|   conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 325

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 46/132 (34%), Positives = 55/132 (41%), Gaps = 8/132 (6%)

Query: 4   ITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDPA 63
           ITD+ G ++GH Q  +         A                D RGGAPGTRETDLL+P 
Sbjct: 6   ITDIDGFKLGHAQDFEG--------ATGCTVLLCEEGASGGVDVRGGAPGTRETDLLNPM 57

Query: 64  NSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWN 123
             V  V                  VM +LE    G  +    VPIV GAV+FDL  G   
Sbjct: 58  EMVDKVHAIVLSGGSAFGLDSCSGVMEYLENKNVGFDVGVAKVPIVCGAVLFDLACGNPK 117

Query: 124 CRPTADFGYSAC 135
            RP  + G  AC
Sbjct: 118 IRPNKEMGLEAC 129





 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 217 LAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTV 276
           LA  S+P   F    NTTIG I  +   + A   +IA  A +G  RTIRPAHT  DGDT+
Sbjct: 218 LANYSNPKNVFKG--NTTIGCIVTNGDFNKAEANKIASMAQNGFGRTIRPAHTMFDGDTI 275

Query: 277 FAL 279
           F L
Sbjct: 276 FTL 278





>gi|23009700|gb|ZP_00050653.1|   hypothetical protein [Magnetospirillum magnetotacticum]
          Length = 106

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 29/46 (63%), Positives = 36/46 (78%)

Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           T+ V+A DAAL+ A  +R+A+ A DGLAR I PAHTPLDGD VFA+
Sbjct: 7   TLAVVATDAALTKAQAKRLAVVAQDGLARAIHPAHTPLDGDVVFAV 52





>gi|15898366|ref|NP_342971.1|   Conserved hypothetical protein [Sulfolobus solfataricus]
 gi|25375721|pir||B90313   conserved hypothetical protein [imported] - Sulfolobus solfataricus
 gi|13814773|gb|AAK41761.1|   Conserved hypothetical protein [Sulfolobus solfataricus]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.003
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           NTP  TT+GV+  ++ L+ +   R+A +A +G +  I+P +  LDGDTVF +
Sbjct: 203 NTP-GTTLGVVITNSKLNNSDACRVASSAENGFSSVIKPYNLSLDGDTVFTI 253





>gi|15805808|ref|NP_294506.1|   conserved hypothetical protein [Deinococcus radiodurans]
 gi|7471369|pir||B75476   conserved hypothetical protein - Deinococcus radiodurans  (strain
           R1)
 gi|6458494|gb|AAF10360.1|AE001933_4   conserved hypothetical protein [Deinococcus radiodurans]
          Length = 310

 Score = 42.0 bits (97), Expect = 0.013
 Identities = 40/124 (32%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 3   SITDVGGIRVGHYQRLDPDASLGAGWACXXXXXXXXXXXXXXXDCRGGAPGTRETDLLDP 62
           ++T + G +VGH+   DP A  G                       G +P TRE  LL P
Sbjct: 17  TLTAIPGFQVGHWT--DPLAQTGCTVVLCPPEGAVASASFI-----GPSPATREGVLLSP 69

Query: 63  ANSVRFVDXXXXXXXXXXXXXXXXXVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
              V  V                  V+R LEE   G     G VPIVP AVI+DL VG  
Sbjct: 70  EKKVERVHALLLTGGSAFGLAAATGVVRVLEERGIGHETAFGRVPIVPAAVIYDLGVGNP 129

Query: 123 NCRP 126
             RP
Sbjct: 130 RVRP 133





>gi|423943|pir||A47039   nylon oligomer-degrading enzyme EIII nylC - Flavobacterium sp
 gi|216839|dbj|BAA01528.1|   endotype 6-aminohexanoate-oligomer hydrolase [Flavobacterium sp.]
 gi|488341|dbj|BAA05088.1|   endo-type 6-aminohexanoate oligomer hydrolase [Flavobacterium sp.]
          Length = 355

 Score = 41.2 bits (95), Expect = 0.027
 Identities = 20/48 (41%), Positives = 28/48 (58%)

Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
           NTTI  I  +  +SP    + A   H  + R I+P HT +DGDT+FA+
Sbjct: 266 NTTISAIVTNVRMSPVELNQFAKQVHSSMHRGIQPFHTDMDGDTLFAV 313









  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Mar 31, 2003  2:17 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.321    0.138    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,038,894
Number of Sequences: 1393205
Number of extensions: 6562261
Number of successful extensions: 10922
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 10863
Number of HSP's gapped (non-prelim): 41
length of query: 344
length of database: 448,689,247
effective HSP length: 124
effective length of query: 220
effective length of database: 275,931,827
effective search space: 60705001940
effective search space used: 60705001940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)