geneid predictions on sequence submitted from basileia.imim.es are: |
## date Fri May 27 14:46:19 2005
## source-version: geneid v 1.2 -- geneid@imim.es
# Sequence HS307871 - Length = 4514 bps
# Optimal Gene Structure. 1 genes. Score = 16.20
# Gene 1 (Forward). 9 exons. 391 aa. Score = 16.20
Internal 1710 1860 -0.11 + 0 1 -0.36 5.38 4.68 0.00 AA 1: 51 HS307871_1
Internal 1976 2055 0.24 + 2 0 4.17 4.71 -0.22 0.00 AA 51: 77 HS307871_1
Internal 2132 2194 0.44 + 0 0 4.23 0.58 6.38 0.00 AA 78: 98 HS307871_1
Internal 2434 2682 4.66 + 0 0 5.09 0.16 16.28 0.00 AA 99:181 HS307871_1
Internal 2749 2910 3.19 + 0 0 4.65 5.34 5.50 0.00 AA 182:235 HS307871_1
Internal 3279 3416 0.97 + 0 0 1.52 3.24 7.80 0.00 AA 236:281 HS307871_1
Internal 3576 3676 3.23 + 0 2 2.70 3.95 10.61 0.00 AA 282:315 HS307871_1
Internal 3780 3846 -0.96 + 1 0 2.83 1.86 3.06 0.00 AA 315:337 HS307871_1
Terminal 4179 4340 4.55 + 0 0 2.65 0.00 19.89 0.00 AA 338:391 HS307871_1
>HS307871_1|geneid_v1.2_predicted_protein_1|391_AA
HTDTYPHPHLIARPQGFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQD
FFSTCRSPEACCELTLQPLRRFLLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLRE
EQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPVMWDRAGTRGAGRSLW
KWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLF
ESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGY
EVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANL
GHGLYPDMDPEHVGAFVDAVHKHSRLLRQN*
Species:
Homo sapiens
Command:
geneid -P human.param geneid12724basileia.imim.es.fasta
Running time:
0.18 secs
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