BLASTP2 Result
of 
Bork Group's Advanced BLAST2 Search Service at 
EMBL.
back to BLAST2
BLASTP 2.0MP-WashU [16-Dec-1999] [irix6-r10k-L64 23:35:48 16-Dec-1999]
Copyright (C) 1996-1999 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-1999) http://blast.wustl.edu
Query= query_sequence
(194 letters)
Echofilter:
>Filtered+0
MQDLTSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFC
KNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXXXXXXXQTVAEKPDHHGSGSEEKEERV
SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD
DTWTDLAMNRMEKN
Database: nrdb Release 28.Mar.2001
650,684 sequences; 204,508,729 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Query sequence and locally-aligned HSPs from database sequences
0 40 80 120 160
| | | | | |194
query_sequence | __________________________________________________
^ v sptrembl|O82155|O8 | __________________________________________________
^ v sptrembl|O82156|O8 | __________________________________________________
^ v sptrembl|Q9SK07|Q9 | ____________ _______
^ v sptrembl|Q9LSS6|Q9 | ___________________ _______
^ v sptrembl|Q9FJH1|Q9 | ____________________________________
^ v sptrembl|Q43570|Q4 | ____________ _________
^ v sptrembl|Q9XGU5|Q9 | ____________________________________
^ v sptrembl|Q9FM03|Q9 | ____________ __________________
^ v sptrembl|Q9SGV3|Q9 | _______________________
^ v sptrembl|Q9LSL6|Q9 | ____________
^ v sptrembl|Q9XGU6|Q9 | ____________
^ v sptrembl|Q9SXG5|Q9 | ____________
^ v sptrembl|Q9SZK0|Q9 | ____________
^ v sptrembl|Q9LQN7|Q9 | ____________
^ v sptrembl|Q9FE00|Q9 | ____________
^ v sptrembl|Q9ZV33|Q9 | ____________
^ v sptrembl|Q9M4G1|Q9 | ____________
^ v sptrembl|Q9ZRX2|Q9 | ____________ _____________
^ v sptrembl|O82027|O8 | __________________________________
^ v sptrembl|Q9FZA4|Q9 | _________________________
^ v sptrembl|Q41800|Q4 | __________________
^ v sptrembl|Q9LZ56|Q9 | ____________________________________
^ v sptrembl|Q9SSY7|Q9 | ____________
^ v sptrembl|O80928|O8 | ____________
^ v sptrembl|Q39088|Q3 | ____________
^ v sptrembl|Q9M2R8|Q9 | ____________
^ v sptrembl|Q9FJJ9|Q9 | ____________ _________
^ v sptrembl|Q43575|Q4 | ____________
^ v sptrembl|Q41801|Q4 | ____________
^ v swiss|P38564|MNBA_ | ____________
^ v sptrembl|Q9SUJ4|Q9 | ____________________________________
^ v sptrembl|Q9M1E6|Q9 | ____________________________________
^ v sptrembl|O22984|O2 | _______________________
^ v sptrembl|Q9SU49|Q9 | _______________________
^ v sptrembl|Q9XGU4|Q9 | ____________
^ v sptrembl|Q9M2U1|Q9 | ____________
^ v sptrembl|Q9SX97|Q9 | ___________________________________
^ v sptrembl|Q9SXG8|Q9 | _______________________
^ v sptrembl|O24463|O2 | ____________
^ v sptrembl|Q9SVC5|Q9 | ____________
^ v sptrembl|Q9SXG7|Q9 | ____________
^ v sptrembl|O81600|O8 | ____________ ___________
^ v sptrembl|Q9SUA9|Q9 | _________________________
^ v sptrembl|Q43574|Q4 | ____________
^ v sptrembl|Q9FGD6|Q9 | ____________
^ v sptrembl|Q43573|Q4 | ____________
^ v sptrembl|Q9M161|Q9 | ____________
^ v sptrembl|Q43385|Q4 | ____________
^ v sptrembl|Q9ZPY0|Q9 | ____________
^ v sptrembl|Q9SAF9|Q9 | ____________
^ v sptrembl|Q9ZS77|Q9 | ____________
^ v sptrembl|Q9LQX4|Q9 | ____________ ______
^ v sptrembl|Q9SUB0|Q9 | ____________
^ v sptrembl|Q9SEZ3|Q9 | ____________
^ v sptrembl|Q9LI39|Q9 | ____________
^ v sptrembl|O23083|O2 | ____________
^ v sptrembl|O81601|O8 | ____________
^ v sptrembl|O49550|O4 | ____________
^ v sptrembl|Q9SXG6|Q9 | ____________
^ v sptrembl|O22967|O2 | ____________
^ v sptrembl|Q39540|Q3 | ____________
^ v sptrembl|Q9FK95|Q9 | _____________________
^ v sptrembl|Q9SDF4|Q9 | ____________
^ v sptrembl|Q9ZSM2|Q9 | ___________
^ v sptrembl|Q9SXG4|Q9 | __________
^ v sptrembl|Q9SUB1|Q9 | ___________
^ v pironly|T46072|T46 | _____
^ v sptrembl|Q9V1K2|Q9 | ________
^ v sptrembl|O26236|O2 | _____________
Alignments:
^ = sptrembl|O82155|O82155 DOF ZINC FINGER
PROTEIN.//:sptremblnew|AAG50875|AAG50875 DOF ZINC FINGER
PROTEIN.//:tremblnew|AC025294|AC025294_15 gene: "F19C24.9";
product: "dof zinc finger protein"; Arabidopsis thaliana
chromosome 1 BAC F19C24 genomic sequence, complete sequence.
//:trembl|AB017564|AB017564_1 gene: "adof1"; product: "dof zinc
finger protein"; Arabidopsis thaliana adof1 mRNA for dof zinc
finger protein, complete cds. //:trembl|AC025294|AC025294_15 gene:
"F19C24.9"; product: "dof zinc finger protein"; Arabidopsis
thaliana chromosome 1 BAC F19C24 genomic sequence, complete
sequence. //:pironly|T52044|T52044 dof zinc finger protein
[imported] - Arabidopsis thaliana//:gp|AB017564|3608261 dof zinc
finger protein [Arabidopsis thaliana]//:gp|AC025294|12321673 dof
zinc finger protein [Arabidopsis thaliana]
Length = 194
0 40 80 120 160
| | | | | |194
sptrembl|O82155|O8215 | __________________________________________________
Local hits (HSPs) | __________________________________________________
Score = 898 (321.2 bits), Expect = 9.0e-90, P = 9.0e-90
Identities = 168/194 (86%), Positives = 168/194 (86%)
Query: 1 MQDLTSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFC 60
MQDLTSAAAYYHQSMMMTTAKQN KCPRCDSPNTKFCYYNNYNLSQPRHFC
Sbjct: 1 MQDLTSAAAYYHQSMMMTTAKQNQPELPEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFC 60
Query: 61 KNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXXXXXXXQTVAEKPDHHGSGSEEKEERV 120
KNCRRYWTKGGALRNIPVGGGTR QTVAEKPDHHGSGSEEKEERV
Sbjct: 61 KNCRRYWTKGGALRNIPVGGGTRKSNKRSGSSPSSNLKNQTVAEKPDHHGSGSEEKEERV 120
Query: 121 SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD 180
SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD
Sbjct: 121 SGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGLGSVRRSD 180
Query: 181 DTWTDLAMNRMEKN 194
DTWTDLAMNRMEKN
Sbjct: 181 DTWTDLAMNRMEKN 194
^ = sptrembl|O82156|O82156 DOF ZINC FINGER PROTEIN (DOF ZINC FINGER
PROTEIN-LIKE).//:tremblnew|AB023045|AB023045_14 product: "Dof zinc
finger protein-like"; Arabidopsis thaliana genomic DNA, chromosome
3, P1 clone: MXL8. //:trembl|AB017565|AB017565_1 gene: "adof2";
product: "Dof zinc finger protein"; Arabidopsis thaliana adof2
mRNA for Dof zinc finger protein, complete cds.
//:trembl|AB023045|AB023045_14 product: "Dof zinc finger
protein-like"; Arabidopsis thaliana genomic DNA, chromosome 3, P1
clone: MXL8. //:pironly|T52045|T52045 Dof zinc finger protein
[imported] - Arabidopsis thaliana//:gp|AB017565|3608263 Dof zinc
finger protein [Arabidopsis thaliana]//:gp|AB023045|9280230 Dof
zinc finger protein-like [Arabidopsis thaliana]
Length = 204
0 40 80 120 160 200
| | | | | |204
sptrembl|O82156|O8215 | __________________________________________________
Local hits (HSPs) | _________________________________________________
Score = 479 (173.7 bits), Expect = 2.3e-45, P = 2.3e-45
Identities = 103/208 (49%), Positives = 126/208 (60%)
Query: 1 MQDLTSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFC 60
MQD AAYY Q+MM +Q KCPRCDSPNTKFCYYNNYNLSQPRHFC
Sbjct: 1 MQD---PAAYY-QTMMAKQQQQQQPQFAEQEQLKCPRCDSPNTKFCYYNNYNLSQPRHFC 56
Query: 61 KNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXXXXXXXQTVAEKPDHHGSGSEEKEERV 120
K+CRRYWTKGGALRN+PVGGG+R + + + + + + R
Sbjct: 57 KSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDPDPDPRN 116
Query: 121 SGQ-EMNPTRMLYGLPVGDPN------GASFSSLLASNMQMG---GLVYESGSRW-LPGM 169
S + +++PTRMLYG P+GD + G SFSSLLA+NMQ+G G + GS W PGM
Sbjct: 117 SQKPDLDPTRMLYGFPIGDQDVKGMEIGGSFSSLLANNMQLGLGGGGIMLDGSGWDHPGM 176
Query: 170 DLGLGSVR---RSDDTWTDLAMNRMEKN 194
LGL +++ WTDLAMNR EKN
Sbjct: 177 GLGLRRTEPGNNNNNPWTDLAMNRAEKN 204
^ = sptrembl|Q9SK07|Q9SK07 PUTATIVE DOF ZINC FINGER
PROTEIN.//:trembl|AC006587|AC006587_6 gene: "At2g28510"; product:
"putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 161 of 255 of the complete sequence. Sequence
from clones T17D12, T8O18. //:gp|AC006587|4510399 putative DOF zinc
finger protein [Arabidopsis thaliana]
Length = 259
0 60 120 180 240
| | | | | |259
sptrembl|Q9SK07|Q9SK0 | __________________________________________________
Local hits (HSPs) | _________ ______
Score = 266 (98.7 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 42/49 (85%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+SPNTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 21 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCR 69
Score = 48 (22.0 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 112 GSEEKEERVSGQEMN---PTRMLYGLP---VGDPNG 141
G+E K+E V+ N P+++ +G P GD G
Sbjct: 195 GNERKQENVNNNNNNSENPSKVFWGFPWQMTGDSAG 230
^ = sptrembl|Q9LSS6|Q9LSS6 DOF6 ZINC FINGER
PROTEIN-LIKE.//:tremblnew|AB026632|AB026632_8 product: "Dof6 zinc
finger protein-like"; Arabidopsis thaliana genomic DNA, chromosome
5, BAC clone:F15L12. //:trembl|AB026632|AB026632_8 product: "Dof6
zinc finger protein-like"; Arabidopsis thaliana genomic DNA,
chromosome 5, BAC clone:F15L12. //:gp|AB026632|8885571 Dof6 zinc
finger protein-like [Arabidopsis thaliana]
Length = 237
0 50 100 150 200
| | | | | |237
sptrembl|Q9LSS6|Q9LSS | __________________________________________________
Local hits (HSPs) | _______________ _____
Score = 264 (98.0 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 46/77 (59%), Positives = 52/77 (67%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
+CPRCDS NTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRNIPVGGG R
Sbjct: 36 RCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAA 95
Query: 94 XXXXXXQTVAEKPDHHG 110
+T E H G
Sbjct: 96 RSL---RTTPEPASHDG 109
Score = 44 (20.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 126 NPTRMLYGLPVGDPNGASFSSLLASNMQMGG 156
+P+R+L+G P NG SF + N+ GG
Sbjct: 186 DPSRVLWGFP-WQMNGESFGMM---NIGGGG 212
^ = sptrembl|Q9FJH1|Q9FJH1 ZINC FINGER PROTEIN.//:tremblnew|AB015472|AB015472_9
product: "zinc finger protein"; Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MAE1. //:trembl|AB015472|AB015472_9 product:
"zinc finger protein"; Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MAE1. //:gp|AB015472|10176912 zinc finger
protein [Arabidopsis thaliana]
Length = 307
0 70 140 210 280
| | | | | |307
sptrembl|Q9FJH1|Q9FJH | __________________________________________________
Local hits (HSPs) | _______________________
Score = 293 (108.2 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 65/149 (43%), Positives = 76/149 (51%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
KCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGG R
Sbjct: 52 KCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKAKRSKTKQV 111
Query: 94 -XXXXXXQTVAEKPDHH-----GSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGASFSSL 147
+ + DHH +GS E S N T + V A +S
Sbjct: 112 PSSSSADKPTTTQDDHHVEEKSSTGSHSSSESSSLTASNSTTVA---AVSVTAAAEVASS 168
Query: 148 LASNMQMGGL-VYESGSRWLPGMDLGLGS 175
+ M + +Y +G W LG GS
Sbjct: 169 VIPGFDMPNMKIYGNGIEW--STLLGQGS 195
^ = sptrembl|Q43570|Q43570 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97942|NTBBF11_1 gene: "NtBBF1.1"; product:
"Zn finger protein"; N.tabacum mRNA for zinc finger protein,
BBF1.1 //:pironly|T02370|T02370 finger protein BBF1.1 - common
tobacco (fragment)//:gp|X97942|1360078 Zn finger protein [Nicotiana
tabacum]
Length = 234
0 50 100 150 200
| | | | | |234
sptrembl|Q43570|Q4357 | __________________________________________________
Local hits (HSPs) | __________ ________
Score = 253 (94.1 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+LSQPR+FCK CRRYWT GG+LRN+PVGGG+R
Sbjct: 46 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTDGGSLRNVPVGGGSR 94
Score = 50 (22.7 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 134 LPVGDPNGA-SF-SSLLASNMQMGGLVYESGSRWLPGM-DL 171
LP+ +PN SF SS++ ++Y S S LP + DL
Sbjct: 161 LPLMNPNSTTSFMSSIMPQISDSNNIMYSSSSTGLPNLHDL 201
^ = sptrembl|Q9XGU5|Q9XGU5 ZINC FINGER PROTEIN
DOF3.//:trembl|AF155817|AF155817_1 product: "zinc finger protein
OBP4"; Arabidopsis thaliana zinc finger protein OBP4 mRNA,
complete cds. //:gp|AF155817|5059396 zinc finger protein OBP4
[Arabidopsis thaliana]
Length = 336
0 70 140 210 280
| | | | | |336
sptrembl|Q9XGU5|Q9XGU | __________________________________________________
Local hits (HSPs) | _____________________
Score = 284 (105.0 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 60/145 (41%), Positives = 73/145 (50%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
KCPRC+S NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGG +R
Sbjct: 51 KCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGRSRKAKRSKTKQV 110
Query: 94 -XXXXXXQTVAEKPDHHGSGSEEKEERVSGQEM-NPTRMLYGLPVGDPNGASFSSLLASN 151
+ + DHH S + + +P L P +S +
Sbjct: 111 PSSSSADKPTTTQDDHHVEEKSSTGSHSSSETLLSPLLTLPPSPPSPSPRRQVASSVIPG 170
Query: 152 MQMGGL-VYESGSRWLPGMDLGLGS 175
M + +Y +G W LG GS
Sbjct: 171 FDMPNMKIYGNGIEW--STLLGQGS 193
^ = sptrembl|Q9FM03|Q9FM03 SIMILARITY TO DOF ZINC FINGER
PROTEIN.//:tremblnew|AB009053|AB009053_26 Arabidopsis thaliana
genomic DNA, chromosome 5, P1 clone:MQB2.
//:trembl|AB009053|AB009053_26 Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MQB2. //:gp|AB009053|10177472 contains
similarity to dof zinc finger protein~gene_id:MQB2.26 [Arabidopsis
thaliana]
Length = 348
0 70 140 210 280
| | | | | |348
sptrembl|Q9FM03|Q9FM0 | __________________________________________________
Local hits (HSPs) | _______ ___________
Score = 258 (95.9 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 42/50 (84%), Positives = 46/50 (92%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRC+S +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRNIPVGGG R
Sbjct: 50 KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCR 99
Score = 40 (19.1 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 21/84 (25%), Positives = 32/84 (38%)
Query: 107 DHHGSGSEEKEERVSG-QEMNPTRMLYGLPV---------GDPNGASFSSLLASNMQMGG 156
DHH +E +RV+ ++ P L L G GA S GG
Sbjct: 265 DHHHYNHQEDHQRVATIMDVKPNPKLLSLDWQQDQCYSNGGGSGGAGKSD--GGGYGNGG 322
Query: 157 LVYESGSRWLPGMDLGLGSVRRSD 180
+ GS W G+ G G+ +++
Sbjct: 323 YINGLGSSW-NGLMNGYGTSTKTN 345
^ = sptrembl|Q9SGV3|Q9SGV3 F1N19.19.//:trembl|AC009519|AC009519_19 product:
"F1N19.19"; Genomic sequence for Arabidopsis thaliana BAC F1N19
from chromosome I, complete sequence. //:gp|AC009519|6633819
F1N19.19 [Arabidopsis thaliana]
Length = 385
0 80 160 240 320
| | | | | |385
sptrembl|Q9SGV3|Q9SGV | __________________________________________________
Local hits (HSPs) | _________ __
Score = 255 (94.8 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 42/72 (58%), Positives = 51/72 (70%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S NTKFCYYNNY+L+QPR+FCK+CRRYWT GG+LRNIPVGGG R
Sbjct: 37 CPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGGGVRKNKRSSSNSSS 96
Query: 95 XXXXXQTVAEKP 106
+ ++KP
Sbjct: 97 SSPSSSSSSKKP 108
Score = 37 (18.1 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 104 EKPDHHGSGSEEKEERVSGQEM 125
E D H EKEE + Q +
Sbjct: 296 ENNDEHSDHEHEKEEGEADQSV 317
^ = sptrembl|Q9LSL6|Q9LSL6 DOF ZINC FINGER
PROTEIN-LIKE.//:tremblnew|AB026639|AB026639_9 product: "DOF zinc
finger protein-like"; Arabidopsis thaliana genomic DNA, chromosome
5, TAC clone:K21L13. //:trembl|AB026639|AB026639_9 product: "DOF
zinc finger protein-like"; Arabidopsis thaliana genomic DNA,
chromosome 5, TAC clone:K21L13. //:gp|AB026639|8978287 DOF zinc
finger protein-like [Arabidopsis thaliana]
Length = 316
0 70 140 210 280
| | | | | |316
sptrembl|Q9LSL6|Q9LSL | __________________________________________________
Local hits (HSPs) | _______
Score = 276 (102.2 bits), Expect = 7.4e-24, P = 7.4e-24
Identities = 43/50 (86%), Positives = 49/50 (98%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRC+SPNTKFCYYNNY+LSQPRHFCK+CRRYWT+GGALRN+P+GGG R
Sbjct: 42 KCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCR 91
^ = sptrembl|Q9XGU6|Q9XGU6 ZINC FINGER PROTEIN
DOF2.//:trembl|AF155816|AF155816_1 product: "zinc finger protein
OBP2"; Arabidopsis thaliana zinc finger protein OBP2 mRNA,
complete cds. //:gp|AF155816|5059394 zinc finger protein OBP2
[Arabidopsis thaliana]
Length = 227
0 50 100 150 200
| | | | | |227
sptrembl|Q9XGU6|Q9XGU | __________________________________________________
Local hits (HSPs) | __________
Score = 274 (101.5 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 18 KCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCR 67
^ = sptrembl|Q9SXG5|Q9SXG5 DOF ZINC FINGER PROTEIN.//:trembl|AB028132|AB028132_1
product: "Dof zinc finger protein"; Oryza sativa mRNA for Dof zinc
finger protein, complete cds. //:gp|AB028132|4996646 Dof zinc
finger protein [Oryza sativa]
Length = 282
0 60 120 180 240
| | | | | |282
sptrembl|Q9SXG5|Q9SXG | __________________________________________________
Local hits (HSPs) | ________
Score = 274 (101.5 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRC+S NTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 46 KCPRCESTNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCR 95
^ = sptrembl|Q9SZK0|Q9SZK0 HYPOTHETICAL 27.3 KDA
PROTEIN.//:trembl|AL161592|ATCHRIV88_32 gene: "AT4g38000"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, contig
fragment No. 88 //:trembl|AL035538|ATF20D10_12 gene: "F20D10.120";
product: "putative protein"; Arabidopsis thaliana DNA chromosome
4, BAC clone F20D10 (ESSA project) //:pironly|T05627|T05627
hypothetical protein F20D10.120 - Arabidopsis
thaliana//:gp|AL035538|4467106 putative protein [Arabidopsis
thaliana]//:gp|AL161592|7270783 putative protein [Arabidopsis
thaliana]
Length = 245
0 50 100 150 200
| | | | | |245
sptrembl|Q9SZK0|Q9SZK | __________________________________________________
Local hits (HSPs) | __________
Score = 274 (101.5 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 43/50 (86%), Positives = 48/50 (96%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNY+LSQPRH+CKNCRRYWT+GGALRN+P+GG TR
Sbjct: 41 KCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTR 90
^ = sptrembl|Q9LQN7|Q9LQN7 F24B9.30 PROTEIN.//:trembl|AC007583|AC007583_30 gene:
"F24B9.30"; Arabidopsis thaliana chromosome 1 BAC F24B9 sequence,
complete sequence. //:gp|AC007583|8439908 Strong similarity to zinc
finger protein OBP2 from Arabidopsis thaliana gb|AF155816. EST
gb|N65215 comes from this gene.
Length = 339
0 70 140 210 280
| | | | | |339
sptrembl|Q9LQN7|Q9LQN | __________________________________________________
Local hits (HSPs) | _______
Score = 274 (101.5 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 44/50 (88%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 86 KCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCR 135
^ = sptrembl|Q9FE00|Q9FE00 P0001B06.2 PROTEIN (P0671B11.24
PROTEIN).//:tremblnew|AP002537|AP002537_2 gene: "P0001B06.2";
Oryza sativa genomic DNA, chromosome 1, PAC clone:P0001B06.
//:tremblnew|AP002746|AP002746_24 gene: "P0671B11.24"; Oryza
sativa genomic DNA, chromosome 1, PAC clone:P0671B11.
//:trembl|AP002537|AP002537_2 gene: "P0001B06.2"; Oryza sativa
genomic DNA, chromosome 1, PAC clone:P0001B06.
//:trembl|AP002746|AP002746_24 gene: "P0671B11.24"; Oryza sativa
genomic DNA, chromosome 1, PAC clone:P0671B11.
//:gp|AP002537|10934071 hypothetical protein [Oryza
sativa]//:gp|AP002746|9988442 hypothetical protein [Oryza sativa]
Length = 215
0 50 100 150 200
| | | | | |215
sptrembl|Q9FE00|Q9FE0 | __________________________________________________
Local hits (HSPs) | ___________
Score = 270 (100.1 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 43/49 (87%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNYNL+QPRHFCK CRRYWT+GGALRN+PVGGGTR
Sbjct: 32 CPRCESTNTKFCYYNNYNLAQPRHFCKACRRYWTRGGALRNVPVGGGTR 80
^ = sptrembl|Q9ZV33|Q9ZV33 PUTATIVE ZINC FINGER
PROTEIN.//:trembl|AC005727|AC005727_6 gene: "At2g28810"; product:
"putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 164 of 255 of the complete sequence. Sequence
from clones T11P11, F8N16, T9I4. //:gp|AC005727|3927829 putative
DOF zinc finger protein [Arabidopsis thaliana]
Length = 320
0 70 140 210 280
| | | | | |320
sptrembl|Q9ZV33|Q9ZV3 | __________________________________________________
Local hits (HSPs) | _______
Score = 269 (99.8 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 43/50 (86%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCY+NNYNL+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 95 KCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCR 144
^ = sptrembl|Q9M4G1|Q9M4G1 DOF ZINC FINGER
PROTEIN.//:trembl|AJ242853|STU242853_1 gene: "dof1"; product: "Dof
zinc finger protein"; Solanum tuberosum mRNA for Dof zinc finger
protein (dof1 gene) //:gp|AJ242853|7688355 Dof zinc finger protein
[Solanum tuberosum]
Length = 324
0 70 140 210 280
| | | | | |324
sptrembl|Q9M4G1|Q9M4G | __________________________________________________
Local hits (HSPs) | _______
Score = 269 (99.8 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 43/50 (86%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCY+NNYNLSQPRHFCK CRRYWT+GGALR++PVGGG R
Sbjct: 72 KCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCR 121
^ = sptrembl|Q9ZRX2|Q9ZRX2 PBF PROTEIN (FRAGMENT).//:trembl|AJ012284|TAE012284_1
gene: "pbf"; product: "PBF protein"; Triticum aestivum mRNA for
DNA binding protein PBF, partial //:gp|AJ012284|3790264 PBF protein
[Triticum aestivum]
Length = 330
0 70 140 210 280
| | | | | |330
sptrembl|Q9ZRX2|Q9ZRX | __________________________________________________
Local hits (HSPs) | _______ ________
Score = 244 (91.0 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
+CPRC S NTKFCYYNNY++SQPR+FCK CRRYWT GG+LRN+P+GGG R
Sbjct: 37 ECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCR 86
Score = 39 (18.8 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 18/60 (30%), Positives = 26/60 (43%)
Query: 121 SGQEMNPTRMLYGLPV-----GD--PNGASFSSLLASNMQMGGLVYESGSRWLPGMDLGL 173
+G M P + +G+PV GD G + AS Q G E G + G+ +GL
Sbjct: 197 NGMLMTPPAVSFGIPVPMQQHGDLVVGGNGIGAATASIFQ--GATSEEGDDGMGGV-MGL 253
^ = sptrembl|O82027|O82027 DOF ZINC FINGER PROTEIN
(FRAGMENT).//:trembl|AJ009594|NTA9594_1 gene: "BBF1"; product: "Dof
zinc finger protein"; Nicotiana tabacum BBF1 gene
//:pironly|T02203|T02203 finger protein Dof - common tobacco
(fragment)//:gp|AJ009594|3341468 Dof zinc finger protein [Nicotiana
tabacum]
Length = 262
0 60 120 180 240
| | | | | |262
sptrembl|O82027|O8202 | __________________________________________________
Local hits (HSPs) | ____________________________
Score = 268 (99.4 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 59/151 (39%), Positives = 80/151 (52%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S NTKFCYYNNY+LSQPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 38 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSSNN 97
Query: 95 XXXXXQTVAEK-PDHHGSGSEEKEERVSGQE-----MNPTRM--------LYGLPVGDPN 140
+ +K PD S + + ++ NP+ LP+ +PN
Sbjct: 98 SSSSTSSSYKKIPDLTIPTSSQNPKIINEPHDLNLAFNPSATSNFSNISEFMALPLMNPN 157
Query: 141 GA-SF-SSLLASNMQMGGLVYESGSRWLPGM 169
SF SS++ ++Y S S LP +
Sbjct: 158 STTSFMSSIMPQLSDSNNIMYSSSSTGLPNL 188
^ = sptrembl|Q9FZA4|Q9FZA4 F3H9.4 PROTEIN.//:trembl|AC021044|AC021044_4 gene:
"F3H9.4"; Arabidopsis thaliana chromosome I BAC F3H9 genomic
sequence, complete sequence. //:gp|AC021044|9795606 Hypothetical
protein [Arabidopsis thaliana]
Length = 311
0 70 140 210 280
| | | | | |311
sptrembl|Q9FZA4|Q9FZA | __________________________________________________
Local hits (HSPs) | _______________
Score = 268 (99.4 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 51/102 (50%), Positives = 59/102 (57%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
KCPRCDS NTKFCYYNNY+LSQPRHFCK C+RYWT+GG LRN+PVGG R
Sbjct: 28 KCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVKRPST 87
Query: 94 XXXXXXQTVAEKPDHHGSGSEEKEERVSG-QEMNPTRMLYGL 134
TV+ S S ++S MN + YGL
Sbjct: 88 ATTTTASTVSTT----NSSSPNNPHQISHFSSMNHHPLFYGL 125
^ = sptrembl|Q41800|Q41800 DOF2 (FRAGMENT).//:trembl|X79934|ZMDOF2_1 product:
"Dof2"; Z.mays Dof2 mRNA //:pironly|S59852|S59852 DNA-binding
protein Dof2 - maize (fragment)//:gp|X79934|1061306 Dof2 [Zea mays]
Length = 225
0 50 100 150 200
| | | | | |225
sptrembl|Q41800|Q4180 | __________________________________________________
Local hits (HSPs) | _______________
Score = 266 (98.7 bits), Expect = 8.5e-23, P = 8.5e-23
Identities = 43/72 (59%), Positives = 48/72 (66%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC S +TKFCYYNNYN SQPRH CK+CRRYWTKGG+LRN+PVGGGTR
Sbjct: 20 CPRCGSRDTKFCYYNNYNTSQPRHLCKSCRRYWTKGGSLRNVPVGGGTRKSSSSSSSSSA 79
Query: 95 XXXXXQTVAEKP 106
T + P
Sbjct: 80 ATTTTTTTSTSP 91
^ = sptrembl|Q9LZ56|Q9LZ56 PUTATIVE ZINC FINGER
PROTEIN.//:trembl|AL162971|ATT22P11_5 gene: "T22P11_50"; product:
"putative zinc finger protein"; Arabidopsis thaliana DNA
chromosome 5, BAC clone T22P11 (ESSA project)
//:pironly|T48267|T48267 probable zinc finger protein - Arabidopsis
thaliana//:gp|AL162971|7413635 putative zinc finger protein
[Arabidopsis thaliana]
Length = 399
0 80 160 240 320
| | | | | |399
sptrembl|Q9LZ56|Q9LZ5 | __________________________________________________
Local hits (HSPs) | ________________
Score = 266 (98.7 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 59/143 (41%), Positives = 77/143 (53%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
KCPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALR++PVGGG R
Sbjct: 96 KCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRTKNSSG 155
Query: 94 XXXXXXQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGAS-FSSLLASNM 152
SG+ + ++ + + R + +G P+ +S SSLL+S
Sbjct: 156 GGGGSTS----------SGNSKSQDSATSNDQYHHRAMANNQMGPPSSSSSLSSLLSS-- 203
Query: 153 QMGGLVYESGSRWLPGMDLGLGS 175
GL+ LGLGS
Sbjct: 204 YNAGLIPGHDHNSNNNNILGLGS 226
^ = sptrembl|Q9SSY7|Q9SSY7 ELICITOR-RESPONSIVE DOF PROTEIN
ERDP.//:trembl|AB026297|AB026297_1 product: "elicitor-responsive
Dof protein ERDP"; Pisum sativum mRNA for elicitor-responsive Dof
protein ERDP, complete cds. //:gp|AB026297|6092016
elicitor-responsive Dof protein ERDP [Pisum sativum]
Length = 283
0 60 120 180 240
| | | | | |283
sptrembl|Q9SSY7|Q9SSY | __________________________________________________
Local hits (HSPs) | ________
Score = 264 (98.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRN+PVGGG R
Sbjct: 38 KCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCR 87
^ = sptrembl|O80928|O80928 PUTATIVE ZINC FINGER
PROTEIN.//:trembl|AC004684|AC004684_9 gene: "At2g37590"; product:
"putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 204 of 255 of the complete sequence. Sequence
from clones F3G5, F13M22. //:pironly|T02525|T02525 hypothetical
protein F13M22.9 - Arabidopsis thaliana//:gp|AC004684|3236241
putative DOF zinc finger protein [Arabidopsis thaliana]
Length = 330
0 70 140 210 280
| | | | | |330
sptrembl|O80928|O8092 | __________________________________________________
Local hits (HSPs) | _______
Score = 262 (97.3 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 41/50 (82%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRC+S NTKFCY+NNY+L+QPRHFCK CRRYWT+GGALRN+PVGGG R
Sbjct: 90 KCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCR 139
^ = sptrembl|Q39088|Q39088 DNA BINDING PROTEIN.//:trembl|X89192|ATDNABPRO_1
product: "DNA binding protein"; A.thaliana mRNA for DNA binding
protein //:gp|X89192|1212759 DNA binding protein [Arabidopsis
thaliana]
Length = 240
0 50 100 150 200
| | | | | |240
sptrembl|Q39088|Q3908 | __________________________________________________
Local hits (HSPs) | __________
Score = 261 (96.9 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 42/49 (85%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRCDS NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTR
Sbjct: 19 CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTR 67
^ = sptrembl|Q9M2R8|Q9M2R8 DNA BINDING PROTEIN.//:trembl|AL132976|ATF11C1_25
gene: "F11C1_250"; product: "DNA binding protein"; Arabidopsis
thaliana DNA chromosome 3, BAC clone F11C1 //:gp|AL132976|7630027
DNA binding protein [Arabidopsis thaliana]
Length = 253
0 50 100 150 200 250
| | | | | |253
sptrembl|Q9M2R8|Q9M2R | __________________________________________________
Local hits (HSPs) | _________
Score = 261 (96.9 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 42/49 (85%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRCDS NTKFCYYNNYN SQPRHFCK CRRYWT GG LR++PVGGGTR
Sbjct: 32 CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTR 80
^ = sptrembl|Q9FJJ9|Q9FJJ9 H-PROTEIN PROMOTER BINDING FACTOR-LIKE
PROTEIN.//:tremblnew|AB015469|AB015469_3 product: "H-protein
promoter binding factor-like protein"; Arabidopsis thaliana
genomic DNA, chromosome 5, TAC clone:K19B1.
//:trembl|AB015469|AB015469_3 product: "H-protein promoter binding
factor-like protein"; Arabidopsis thaliana genomic DNA, chromosome
5, TAC clone:K19B1. //:gp|AB015469|10178074 H-protein promoter
binding factor-like protein [Arabidopsis thaliana]
Length = 298
0 60 120 180 240
| | | | | |298
sptrembl|Q9FJJ9|Q9FJJ | __________________________________________________
Local hits (HSPs) | ________ ______
Score = 229 (85.7 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 34/49 (69%), Positives = 42/49 (85%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCYYNNYN++QPRHFCK C+RYWT GG +R++P+G G R
Sbjct: 56 CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRR 104
Score = 46 (21.3 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 110 GSGSEEKEERVSGQEMNPTRML-YGLPVGDPNGASFSSL 147
G S +++E V ++ N + ++ L + DPN A+ SS+
Sbjct: 208 GKHSRDEDETVKQKQRNGSVLVPKTLRIDDPNEAAKSSI 246
^ = sptrembl|Q43575|Q43575 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97947|NTBBF3_1 gene: "NtBBF3"; product: "Zn
finger protein"; N.tabacum mRNA for zinc finger protein, BBF3
//:pironly|T02375|T02375 finger protein BBF3 - common tobacco
(fragment)//:gp|X97947|1360088 Zn finger protein [Nicotiana
tabacum]
Length = 119
0 30 60 90
| | | | |119
sptrembl|Q43575|Q4357 | __________________________________________________
Local hits (HSPs) | ____________________
Score = 260 (96.6 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS +TKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRNIPVGGG R
Sbjct: 46 KCPRCDSTHTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCR 95
^ = sptrembl|Q41801|Q41801 DOF3 GENE (FRAGMENT).//:trembl|X79935|ZMDOF3_1
product: "Dof3 gene"; Z.mays Dof3 mRNA //:pironly|S59853|S59853
DNA-binding protein Dof3 - maize (fragment)//:gp|X79935|1061308
Dof3 gene [Zea mays]
Length = 302
0 60 120 180 240 300
| | | | | |302
sptrembl|Q41801|Q4180 | __________________________________________________
Local hits (HSPs) | ________
Score = 260 (96.6 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 41/50 (82%), Positives = 47/50 (94%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCY+NNY+L+QPRHFC+ CRRYWT+GGALRN+PVGGG R
Sbjct: 33 KCPRCDSTNTKFCYFNNYSLTQPRHFCRACRRYWTRGGALRNVPVGGGYR 82
^ = swiss|P38564|MNBA_MAIZE DNA-BINDING PROTEIN MNB1A.//:trembl|X66076|ZMMNB1A_1
gene: "MNB1a"; product: "DNA-binding protein"; Z.mays MNB1a mRNA
for DNA-binding protein //:gp|X66076|517258 DNA-binding protein
[Zea mays]
Length = 238
0 50 100 150 200
| | | | | |238
swiss|P38564|MNBA_MAI | __________________________________________________
Local hits (HSPs) | __________
Score = 259 (96.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 42/49 (85%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S +TKFCYYNNYN SQPRHFCK CRRYWTKGG LRN+PVGGGTR
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTR 97
^ = sptrembl|Q9SUJ4|Q9SUJ4 DOF ZINC FINGER
PROTEIN.//:trembl|AJ243033|ATH243033_1 gene: "dof6"; product: "dof
zinc finger protein"; Arabidopsis thaliana mRNA for dof zinc
finger protein (dof6 gene) //:gp|AJ243033|5689615 dof zinc finger
protein [Arabidopsis thaliana]
Length = 245
0 50 100 150 200
| | | | | |245
sptrembl|Q9SUJ4|Q9SUJ | __________________________________________________
Local hits (HSPs) | _____________________________
Score = 259 (96.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 59/148 (39%), Positives = 76/148 (51%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
+CPRCDS NTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRNIP+GG R
Sbjct: 41 RCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATK 100
Query: 94 XXXXXXQ-TVAEKPDHHGSGS-EEKEERVSGQEMNPTRMLYGL----PVGDPNGASFSSL 147
+ T+ + S +S ++M + Y L P+G + F S
Sbjct: 101 SLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQME-LGLAYALLNKQPLGVSSHLGFGSS 159
Query: 148 LASNMQMGGLVYESGSRWLPGMDLGLGS 175
S M M G VY + S + G+
Sbjct: 160 -QSPMAMDG-VYGTTSHQMENTGYAFGN 185
^ = sptrembl|Q9M1E6|Q9M1E6 DOF6 ZINC FINGER
PROTEIN.//:trembl|AL138657|ATF9K21_19 gene: "F9K21.190"; product:
"dof6 zinc finger protein"; Arabidopsis thaliana DNA chromosome 3,
BAC clone F9K21 //:pironly|T47501|T47501 dof6 zinc finger protein -
Arabidopsis thaliana//:gp|AL138657|6996264 dof6 zinc finger protein
[Arabidopsis thaliana]
Length = 245
0 50 100 150 200
| | | | | |245
sptrembl|Q9M1E6|Q9M1E | __________________________________________________
Local hits (HSPs) | _____________________________
Score = 259 (96.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 59/148 (39%), Positives = 76/148 (51%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXX 93
+CPRCDS NTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRNIP+GG R
Sbjct: 41 RCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATK 100
Query: 94 XXXXXXQ-TVAEKPDHHGSGS-EEKEERVSGQEMNPTRMLYGL----PVGDPNGASFSSL 147
+ T+ + S +S ++M + Y L P+G + F S
Sbjct: 101 SLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQME-LGLAYALLNKQPLGVSSHLGFGSS 159
Query: 148 LASNMQMGGLVYESGSRWLPGMDLGLGS 175
S M M G VY + S + G+
Sbjct: 160 -QSPMAMDG-VYGTTSHQMENTGYAFGN 185
^ = sptrembl|O22984|O22984 ZINC FINGER PROTEIN
ISOLOG.//:trembl|AC002343|ATAC2343_13 gene: "T19F6.13"; product:
"zinc finger protein isolog"; Arabidopsis thaliana chromosome IV
BAC T19F6 genomic sequence, complete sequence.
//:gp|AC002343|2262110 zinc finger protein isolog [Arabidopsis
thaliana]
Length = 342
0 70 140 210 280
| | | | | |342
sptrembl|O22984|O2298 | __________________________________________________
Local hits (HSPs) | ______________
Score = 258 (95.9 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 49/99 (49%), Positives = 61/99 (61%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR----XXXXXXX 90
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG+R
Sbjct: 55 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSD 114
Query: 91 XXXXXXXXXQTVAEK--PDHHGSGSEEKEERVSGQEMNP 127
Q +K DHH ++ ++GQ NP
Sbjct: 115 ISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQ--NP 151
^ = sptrembl|Q9SU49|Q9SU49 HYPOTHETICAL 39.6 KDA
PROTEIN.//:trembl|AL161560|ATCHRIV60_36 gene: "AT4g24060"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, contig
fragment No. 60 //:trembl|AL109619|ATT19F6_5 gene: "AT4g24060";
product: "putative protein"; Arabidopsis thaliana DNA chromosome
4, BAC clone T19F6, partial sequence (ESSA project)
//:pironly|T13450|T13450 hypothetical protein T19F6.50 -
Arabidopsis thaliana//:gp|AL109619|5668634 putative protein
[Arabidopsis thaliana]//:gp|AL161560|7269255 putative protein
[Arabidopsis thaliana]
Length = 361
0 80 160 240 320
| | | | | |361
sptrembl|Q9SU49|Q9SU4 | __________________________________________________
Local hits (HSPs) | _____________
Score = 258 (95.9 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 49/99 (49%), Positives = 61/99 (61%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR----XXXXXXX 90
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRNIPVGGG+R
Sbjct: 74 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKRSHSSSSD 133
Query: 91 XXXXXXXXXQTVAEK--PDHHGSGSEEKEERVSGQEMNP 127
Q +K DHH ++ ++GQ NP
Sbjct: 134 ISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQ--NP 170
^ = sptrembl|Q9XGU4|Q9XGU4 ZINC FINGER PROTEIN
DOF4.//:trembl|AF155818|AF155818_1 product: "zinc finger protein
OBP3"; Arabidopsis thaliana zinc finger protein OBP3 mRNA,
complete cds. //:pironly|T50640|T50640 zinc finger protein OBP3
[imported] - Arabidopsis thaliana//:gp|AF155818|5059398 zinc finger
protein OBP3 [Arabidopsis thaliana]
Length = 264
0 60 120 180 240
| | | | | |264
sptrembl|Q9XGU4|Q9XGU | __________________________________________________
Local hits (HSPs) | _________
Score = 257 (95.5 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GG+LRN+PVGGG R
Sbjct: 19 CPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFR 67
^ = sptrembl|Q9M2U1|Q9M2U1 ZINC FINGER PROTEIN
OBP3.//:trembl|AL132975|ATT22E16_3 gene: "T22E16.30"; product:
"zinc finger protein OBP3"; Arabidopsis thaliana DNA chromosome 3,
BAC clone T22E16 //:pironly|T47676|T47676 zinc finger protein OBP3
- Arabidopsis thaliana//:gp|AL132975|7076780 zinc finger protein
OBP3 [Arabidopsis thaliana]
Length = 307
0 70 140 210 280
| | | | | |307
sptrembl|Q9M2U1|Q9M2U | __________________________________________________
Local hits (HSPs) | _______
Score = 257 (95.5 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 40/49 (81%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GG+LRN+PVGGG R
Sbjct: 62 CPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFR 110
^ = sptrembl|Q9SX97|Q9SX97 F16N3.5 PROTEIN.//:trembl|AC007519|AC007519_5 gene:
"F16N3.5"; Sequence of BAC F16N3 from Arabidopsis thaliana
chromosome 1, complete sequence. //:gp|AC007519|5668794 Similar to
gb|U82230 prolamin box binding factor (PBF) from Zea mays.
[Arabidopsis thaliana]
Length = 209
0 50 100 150 200
| | | | | |209
sptrembl|Q9SX97|Q9SX9 | __________________________________________________
Local hits (HSPs) | _______________________________
Score = 256 (95.2 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 61/142 (42%), Positives = 78/142 (54%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S TKFCYYNNYNL+QPR++CK+CRRYWT+GG LR++PVGGGTR
Sbjct: 31 CPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFS 90
Query: 95 XXXXXQTVAEKPDHHGSGSEEKEERVSGQEMNPTRMLYGLPVGDPNGASFSSLLASNMQM 154
T A S + + E + T++ L G +G SF+SLL
Sbjct: 91 ------TTATSSSSSSSVITTTTQEPATTEASQTKVT-NLISG--HG-SFASLLGLGSGN 140
Query: 155 GGLVYESGSRW-LPGMDLG-LG 174
GGL Y G + L M +G LG
Sbjct: 141 GGLDYGFGYGYGLEEMSIGYLG 162
^ = sptrembl|Q9SXG8|Q9SXG8 DOF ZINC FINGER PROTEIN.//:trembl|AB028129|AB028129_1
product: "Dof zinc finger protein"; Oryza sativa mRNA for Dof zinc
finger protein, complete cds. //:gp|AB028129|4996640 Dof zinc
finger protein [Oryza sativa]
Length = 378
0 80 160 240 320
| | | | | |378
sptrembl|Q9SXG8|Q9SXG | __________________________________________________
Local hits (HSPs) | ____________
Score = 255 (94.8 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 45/93 (48%), Positives = 53/93 (56%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRC+S NTKFCYYNNY+L QPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 80 CPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSAAS 139
Query: 95 XXXXXQTVAEKPDHHGSGSEEKEERVSGQEMNP 127
+ A S S G NP
Sbjct: 140 ASPASASTANSVVTSASMSMSMASTGGGASKNP 172
^ = sptrembl|O24463|O24463 PROLAMIN BOX BINDING FACTOR.//:trembl|U82230|U82230_1
gene: "PBF"; product: "prolamin box binding factor"; Zea mays
endosperm-specific prolamin box binding factor (PBF) mRNA, complete
cds. //:pironly|T02046|T02046 prolamin box binding factor -
maize//:gp|U82230|2393775 prolamin box binding factor [Zea mays]
Length = 328
0 70 140 210 280
| | | | | |328
sptrembl|O24463|O2446 | __________________________________________________
Local hits (HSPs) | _______
Score = 254 (94.5 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 40/50 (80%), Positives = 45/50 (90%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
KCPRCDS NTKFCYYNNY++SQPR+FCK CRRYWT GG LRN+P+GGG R
Sbjct: 61 KCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCR 110
^ = sptrembl|Q9SVC5|Q9SVC5 HYPOTHETICAL 26.9 KDA
PROTEIN.//:trembl|AL050300|ATF22O6_17 gene: "F22O6_180"; product:
"putative DNA-binding protein"; Arabidopsis thaliana DNA
chromosome 3, BAC clone F22O6 //:pironly|T08455|T08455 hypothetical
protein F22O6.180 - Arabidopsis thaliana//:gp|AL050300|4886283
putative DNA-binding protein [Arabidopsis thaliana]
Length = 247
0 50 100 150 200
| | | | | |247
sptrembl|Q9SVC5|Q9SVC | __________________________________________________
Local hits (HSPs) | _________
Score = 252 (93.8 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 40/49 (81%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S NTKFCYYNNY+L+QPR+FCK CRRYWTKGG+LRN+PVGGG R
Sbjct: 27 CPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCR 75
^ = sptrembl|Q9SXG7|Q9SXG7 DOF ZINC FINGER PROTEIN.//:trembl|AB028130|AB028130_1
product: "Dof zinc finger protein"; Oryza sativa mRNA for Dof zinc
finger protein, complete cds. //:gp|AB028130|4996642 Dof zinc
finger protein [Oryza sativa]
Length = 375
0 80 160 240 320
| | | | | |375
sptrembl|Q9SXG7|Q9SXG | __________________________________________________
Local hits (HSPs) | ______
Score = 251 (93.4 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 39/49 (79%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L QPR+FCK CRRYWT+GG+LRN+PVGGG+R
Sbjct: 76 CPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSR 124
^ = sptrembl|O81600|O81600 H-PROTEIN PROMOTER BINDING
FACTOR-2A.//:trembl|AF079503|AF079503_1 product: "H-protein
promoter binding factor-2a"; Arabidopsis thaliana H-protein
promoter binding factor-2a mRNA, complete cds.
//:trembl|AL132955|ATF1P2_5 gene: "F1P2.50"; product: "H-protein
promoter binding factor-2a"; Arabidopsis thaliana DNA chromosome
3, BAC clone F1P2 //:pironly|T45710|T45710 H-protein promoter
binding factor-2a [imported] - Arabidopsis
thaliana//:gp|AL132955|6522533 H-protein promoter binding factor-2a
[Arabidopsis thaliana]//:gp|AF079503|3386546 H-protein promoter
binding factor-2a [Arabidopsis thaliana]
Length = 448
0 90 180 270 360
| | | | | |448
sptrembl|O81600|O8160 | __________________________________________________
Local hits (HSPs) | _____ _____
Score = 233 (87.1 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S TKFCYYNNYN++QPRHFCK C+RYWT GG +RN+PVG G R
Sbjct: 112 CPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRR 160
Score = 43 (20.2 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 101 TVAEKPDHHGSGSEEKE-ERVSGQEMNPTRMLYGLPVGDPNGASFSSL 147
T+ + P GS ++ E ER Q+ + L + DPN A+ SS+
Sbjct: 347 TLGKHPRDEGSSKKDNETERK--QKAGCVLVPKTLRIDDPNEAAKSSI 392
^ = sptrembl|Q9SUA9|Q9SUA9 PROLAMIN BOX BINDING
PROTEIN-LIKE.//:trembl|AL161554|ATCHRIV54_14 gene: "AT4g21050";
product: "prolamin box binding protein-like"; Arabidopsis thaliana
DNA chromosome 4, contig fragment No. 54
//:trembl|AL080282|ATT13K14_21 gene: "T13K14.210"; product:
"prolamin box binding protein-like"; Arabidopsis thaliana DNA
chromosome 4, BAC clone T13K14 (ESSA project)
//:pironly|T10647|T10647 hypothetical protein T13K14.210 -
Arabidopsis thaliana//:gp|AL080282|5262795 prolamin box binding
protein-like [Arabidopsis thaliana]//:gp|AL161554|7268902 prolamin
box binding protein-like [Arabidopsis thaliana]
Length = 210
0 50 100 150 200
| | | | | |210
sptrembl|Q9SUA9|Q9SUA | __________________________________________________
Local hits (HSPs) | ________________________
Score = 250 (93.1 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 49/103 (47%), Positives = 62/103 (60%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRXXXXXXXXXXX 94
CPRCDS NTKFC+YNNY+ SQPR+FCKNCRRYWT GGALRNIPVGG R
Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKRLKVDQSS 85
Query: 95 XXXXXQTVAEKPDHHGS--GSEEKEERVSGQEMNPTRMLYGLP 135
+V +P +H S ++E E V + + + + +P
Sbjct: 86 ISEMV-SVENQPINHQSFRQTQENNEFVRSFDASSSATVTAVP 127
^ = sptrembl|Q43574|Q43574 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97946|NTBBF2B_1 gene: "NtBBF2b"; product: "Zn
finger protein"; N.tabacum mRNA for zinc finger protein, BBF2b
//:pironly|T02374|T02374 finger protein BBF2b - common tobacco
(fragment)//:gp|X97946|1360086 Zn finger protein [Nicotiana
tabacum]
Length = 114
0 30 60 90
| | | | |114
sptrembl|Q43574|Q4357 | __________________________________________________
Local hits (HSPs) | _____________________
Score = 248 (92.4 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 39/49 (79%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+LSQPR+FCK C+RYWT+GG+LR+IPVGGG+R
Sbjct: 53 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPVGGGSR 101
^ = sptrembl|Q9FGD6|Q9FGD6 DNA BINDING
PROTEIN-LIKE.//:tremblnew|AB026640|AB026640_1 product: "DNA binding
protein-like"; Arabidopsis thaliana genomic DNA, chromosome 5, TAC
clone:K8A10. //:trembl|AB026640|AB026640_1 product: "DNA binding
protein-like"; Arabidopsis thaliana genomic DNA, chromosome 5, TAC
clone:K8A10. //:gp|AB026640|9758539 DNA binding protein-like
[Arabidopsis thaliana]
Length = 225
0 50 100 150 200
| | | | | |225
sptrembl|Q9FGD6|Q9FGD | __________________________________________________
Local hits (HSPs) | __________
Score = 248 (92.4 bits), Expect = 6.8e-21, P = 6.8e-21
Identities = 40/49 (81%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR+IPVGG +R
Sbjct: 34 CPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSR 82
^ = sptrembl|Q43573|Q43573 ZN FINGER PROTEIN
(FRAGMENT).//:trembl|X97945|NTBBF2A_1 gene: "NtBBF2a"; product: "Zn
finger protein"; N.tabacum mRNA for zinc finger protein, BBF2aO
//:pironly|T02373|T02373 finger protein BBF2a - common tobacco
(fragment)//:gp|X97945|1360084 Zn finger protein [Nicotiana
tabacum]
Length = 238
0 50 100 150 200
| | | | | |238
sptrembl|Q43573|Q4357 | __________________________________________________
Local hits (HSPs) | __________
Score = 247 (92.0 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 38/49 (77%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+LSQPR+FCK C+RYWT+GG+LR+IP+GGG+R
Sbjct: 42 CPRCNSTNTKFCYYNNYSLSQPRYFCKTCKRYWTEGGSLRSIPIGGGSR 90
^ = sptrembl|Q9M161|Q9M161 HYPOTHETICAL 31.2 KDA
PROTEIN.//:trembl|AL161491|ATCHRIV3_3 gene: "AT4g00940"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, contig
fragment No. 3 //:gp|AL161491|7267591 putative protein [Arabidopsis
thaliana]
Length = 278
0 60 120 180 240
| | | | | |278
sptrembl|Q9M161|Q9M16 | __________________________________________________
Local hits (HSPs) | ________
Score = 247 (92.0 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 38/49 (77%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+ CK+CRRYWT+GG+LRN+PVGGG+R
Sbjct: 54 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSR 102
^ = sptrembl|Q43385|Q43385 ZN FINGER PROTEIN.//:trembl|X97941|ATBBFA_1 gene:
"DAG1"; product: "Zn finger protein"; A.thaliana mRNA for zinc
finger protein DAG1 (BBFa) //:gp|X97941|1359493 Zn finger protein
[Arabidopsis thaliana]
Length = 234
0 50 100 150 200
| | | | | |234
sptrembl|Q43385|Q4338 | __________________________________________________
Local hits (HSPs) | __________
Score = 246 (91.7 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +R
Sbjct: 14 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 62
^ = sptrembl|Q9ZPY0|Q9ZPY0 PUTATIVE ZINC FINGER
PROTEIN.//:trembl|AC006418|AC006418_12 gene: "At2g46590"; product:
"putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 247 of 255 of the complete sequence. Sequence
from clones F13A10. //:gp|AC006418|4415939 putative DOF zinc finger
protein [Arabidopsis thaliana]
Length = 356
0 80 160 240 320
| | | | | |356
sptrembl|Q9ZPY0|Q9ZPY | __________________________________________________
Local hits (HSPs) | ______
Score = 246 (91.7 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +R
Sbjct: 69 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 117
^ = sptrembl|Q9SAF9|Q9SAF9 DNA-BINDING PROTEIN (TRANSCRIPTION FACTOR
BBFA).//:trembl|AJ224122|ATAJ4122_1 gene: "BBFa"; product:
"DNA-binding protein"; Arabidopsis thaliana BBFa gene
//:trembl|AL138642|ATF21F14_2 gene: "F21F14.20"; product:
"transcription factor BBFa"; Arabidopsis thaliana DNA chromosome
3, BAC clone F21F14 //:pironly|T47977|T47977 transcription factor
BBFa [similarity] - Arabidopsis thaliana//:gp|AJ224122|4581965
DNA-binding protein [Arabidopsis thaliana]//:gp|AL138642|6899883
transcription factor BBFa [Arabidopsis thaliana]
Length = 296
0 60 120 180 240
| | | | | |296
sptrembl|Q9SAF9|Q9SAF | __________________________________________________
Local hits (HSPs) | ________
Score = 246 (91.7 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 38/49 (77%), Positives = 46/49 (93%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG+LRN+PVGG +R
Sbjct: 76 CPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSR 124
^ = sptrembl|Q9ZS77|Q9ZS77 DNA BINDING PROTEIN.//:trembl|AJ000991|HVBPBF_1 gene:
"BPBF"; product: "DNA binding protein"; Hordeum vulgare mRNA for
DNA binding protein BPBF //:gp|AJ000991|3777436 DNA binding protein
[Hordeum vulgare]
Length = 333
0 70 140 210 280
| | | | | |333
sptrembl|Q9ZS77|Q9ZS7 | __________________________________________________
Local hits (HSPs) | _______
Score = 244 (91.0 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 38/50 (76%), Positives = 45/50 (90%)
Query: 34 KCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
+CPRC S NTKFCYYNNY++SQPR+FCK CRRYWT GG+LRN+P+GGG R
Sbjct: 37 ECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNVPIGGGCR 86
^ = sptrembl|Q9LQX4|Q9LQX4 T24P13.17.//:trembl|AC006535|AC006535_17 product:
"T24P13.17"; Genomic sequence for Arabidopsis thaliana BAC T24P13
from chromosome I, complete sequence. //:gp|AC006535|9295735
T24P13.17 [Arabidopsis thaliana]
Length = 366
0 80 160 240 320
| | | | | |366
sptrembl|Q9LQX4|Q9LQX | __________________________________________________
Local hits (HSPs) | ______ ___
Score = 227 (85.0 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S +TKFCYYNNYN++QPRHFC+ C+RYWT GG++R +PVG G R
Sbjct: 107 CPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRR 155
Score = 35 (17.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 102 VAEKPDHHGSGSEEKEERVSGQEMN 126
V E+P H + + E VS QE N
Sbjct: 194 VTERPKHQSNEVKINAEPVS-QEPN 217
^ = sptrembl|Q9SUB0|Q9SUB0 HYPOTHETICAL 26.1 KDA
PROTEIN.//:trembl|AL161554|ATCHRIV54_13 gene: "AT4g21040"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, contig
fragment No. 54 //:trembl|AL080282|ATT13K14_20 gene: "T13K14.200";
product: "putative protein"; Arabidopsis thaliana DNA chromosome
4, BAC clone T13K14 (ESSA project) //:pironly|T10646|T10646
hypothetical protein T13K14.200 - Arabidopsis
thaliana//:gp|AL080282|5262794 putative protein [Arabidopsis
thaliana]//:gp|AL161554|7268901 putative protein [Arabidopsis
thaliana]
Length = 232
0 50 100 150 200
| | | | | |232
sptrembl|Q9SUB0|Q9SUB | __________________________________________________
Local hits (HSPs) | __________
Score = 239 (89.2 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 38/49 (77%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
C RCDS NTKFCYYNNY+ QPR+FCKNCRRYWT GGALRN+P+GG +R
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR 75
^ = sptrembl|Q9SEZ3|Q9SEZ3 PUTATIVE H-PROTEIN PROMOTER BINDING
FACTOR.//:sptremblnew|AAG60104|AAG60104 H-PROTEIN PROMOTER BINDING
FACTOR-2B.//:tremblnew|AC073178|AC073178_27 gene: "F10D13.20";
product: "H-protein promoter binding factor-2b"; Arabidopsis
thaliana chromosome 1 BAC F10D13 genomic sequence, complete
sequence. //:trembl|AC021046|AC021046_9 gene: "F24J1.25"; product:
"H-protein promoter binding factor-2b, putative; 37606-39065";
Arabidopsis thaliana chromosome 1 BAC F24J1 genomic sequence,
complete sequence. //:gp|AC021046|6692253 H-protein promoter
binding factor-2b, putative; 37606-39065 [Arabidopsis
thaliana]//:gp|AC073178|12597792 H-protein promoter binding
factor-2b [Arabidopsis thaliana]
Length = 399
0 80 160 240 320
| | | | | |399
sptrembl|Q9SEZ3|Q9SEZ | __________________________________________________
Local hits (HSPs) | ______
Score = 242 (90.2 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNYN++QPR+FC+NC+RYWT GG++RN+PVG G R
Sbjct: 134 CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRR 182
^ = sptrembl|Q9LI39|Q9LI39 ESTS C23582(S11122).//:trembl|AP001383|AP001383_11
Oryza sativa genomic DNA, chromosome 1, clone:P0453A06.
//:gp|AP001383|7242908 ESTs C23582(S11122),AU056531(S20663)
correspond to a region of the predicted gene.~Similar to AOBP
(D45066) [Oryza sativa]
Length = 420
0 90 180 270 360
| | | | | |420
sptrembl|Q9LI39|Q9LI3 | __________________________________________________
Local hits (HSPs) | _____
Score = 243 (90.6 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S +TKFCYYNNYN++QPRHFCKNC+RYWT GG +RN+PVG G R
Sbjct: 39 CPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRR 87
^ = sptrembl|O23083|O23083 SIMILARITY TO DNA BINDING
PROTEIN.//:trembl|AF013294|ATAF13294_4 gene: "A_TM018A10.2";
Arabidopsis thaliana BAC TM018A10. //:pironly|T01552|T01552
hypothetical protein A_TM018A10.2 - Arabidopsis
thaliana//:gp|AF013294|2252850 contains region of similarity to DNA
binding protein [Arabidopsis thaliana]
Length = 575
0 120 240 360 480
| | | | | |575
sptrembl|O23083|O2308 | __________________________________________________
Local hits (HSPs) | ____
Score = 247 (92.0 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 38/49 (77%), Positives = 47/49 (95%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNY+L+QPR+ CK+CRRYWT+GG+LRN+PVGGG+R
Sbjct: 351 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSR 399
^ = sptrembl|O81601|O81601 H-PROTEIN PROMOTER BINDING
FACTOR-2B.//:trembl|AF079504|AF079504_1 product: "H-protein
promoter binding factor-2b"; Arabidopsis thaliana H-protein
promoter binding factor-2b mRNA, complete cds.
//:pironly|T51953|T51953 H-protein promoter binding factor-2b
[imported] - Arabidopsis thaliana//:gp|AF079504|3386548 H-protein
promoter binding factor-2b [Arabidopsis thaliana]
Length = 400
0 80 160 240 320 400
| | | | | |400
sptrembl|O81601|O8160 | __________________________________________________
Local hits (HSPs) | ______
Score = 242 (90.2 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S NTKFCYYNNYN++QPR+FC+NC+RYWT GG++RN+PVG G R
Sbjct: 135 CPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRR 183
^ = sptrembl|O49550|O49550 HYPOTHETICAL 28.1 KDA
PROTEIN.//:trembl|AL161554|ATCHRIV54_17 gene: "AT4g21080"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, contig
fragment No. 54 //:trembl|AL021960|ATF7J7_2 gene: "F7J7.20";
product: "putative protein"; Arabidopsis thaliana DNA chromosome
4, BAC clone F7J7 (ESSA project) //:pironly|T04939|T04939
hypothetical protein F7J7.20 - Arabidopsis
thaliana//:gp|AL021960|2911065 putative protein [Arabidopsis
thaliana]//:gp|AL161554|7268905 putative protein [Arabidopsis
thaliana]
Length = 249
0 50 100 150 200
| | | | | |249
sptrembl|O49550|O4955 | __________________________________________________
Local hits (HSPs) | _________
Score = 236 (88.1 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 39/49 (79%), Positives = 42/49 (85%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
C RCDS NTKFCYYNNY QPR+FCKNCRRYWT GGALRNIP+GG +R
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR 75
^ = sptrembl|Q9SXG6|Q9SXG6 DOF ZINC FINGER PROTEIN.//:trembl|AB028131|AB028131_1
product: "Dof zinc finger protein"; Oryza sativa mRNA for Dof zinc
finger protein, complete cds. //:gp|AB028131|4996644 Dof zinc
finger protein [Oryza sativa]
Length = 371
0 80 160 240 320
| | | | | |371
sptrembl|Q9SXG6|Q9SXG | __________________________________________________
Local hits (HSPs) | ______
Score = 237 (88.5 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCYYNNY+++QPR+FC+ CRRYWT+GG+LRN+PVGGG R
Sbjct: 47 CPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCR 95
^ = sptrembl|O22967|O22967 DNA-BINDING PROTEIN
ISOLOG.//:trembl|AC002341|ATAC2341_17 gene: "At2g34140"; product:
"putative DOF zinc finger protein"; Arabidopsis thaliana
chromosome II section 188 of 255 of the complete sequence. Sequence
from clones T14G11. //:gp|AC002341|2342734 putative DOF zinc finger
protein [Arabidopsis thaliana]
Length = 170
0 40 80 120 160
| | | | | |170
sptrembl|O22967|O2296 | __________________________________________________
Local hits (HSPs) | ______________
Score = 235 (87.8 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC S TKFCY+NNYN++QPRHFCK C RYWT GGALRN+PVG G R
Sbjct: 60 CPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRR 108
^ = sptrembl|Q39540|Q39540 ASCORBATE OXIDASE PROMOTER-BINDING PROTEIN
(AOBP).//:trembl|D45066|CMAAOP_1 product: "AOBP (ascorbate oxidase
promoter-binding protein)"; Cucurbita maxima mRNA for AOBP
(ascorbate oxidase promoter-binding protein), complete cds.
//:pironly|T09661|T09661 ascorbate oxidase promoter-binding protein
AOBP - winter squash//:gp|D45066|1669341 AOBP (ascorbate oxidase
promoter-binding protein) [Cucurbita maxima]
Length = 380
0 80 160 240 320
| | | | | |380
sptrembl|Q39540|Q3954 | __________________________________________________
Local hits (HSPs) | ______
Score = 236 (88.1 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCYYNNYN++QPRHFCK C+RYWT+GG +RN+PVG G R
Sbjct: 42 CPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTEGGTIRNVPVGAGRR 90
^ = sptrembl|Q9FK95|Q9FK95 SIMILARITY TO H-PROTEIN PROMOTER BINDING
FACTOR.//:tremblnew|AB012243|AB012243_16 Arabidopsis thaliana
genomic DNA, chromosome 5, P1 clone:MIJ24.
//:trembl|AB012243|AB012243_16 Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MIJ24. //:gp|AB012243|9758342 contains
similarity to H-protein promoter binding factor~gene_id:MIJ24.16
[Arabidopsis thaliana]
Length = 515
0 110 220 330 440
| | | | | |515
sptrembl|Q9FK95|Q9FK9 | __________________________________________________
Local hits (HSPs) | _______
Score = 239 (89.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 41/79 (51%), Positives = 50/79 (63%)
Query: 5 TSAAAYYHQSMMMTTAKQNXXXXXXXXXXKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCR 64
T+ AA ++ T Q CPRC+S TKFCYYNNYN++QPRHFCK C+
Sbjct: 110 TTKAAKTNEESGGTACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQ 169
Query: 65 RYWTKGGALRNIPVGGGTR 83
RYWT GG +RN+PVG G R
Sbjct: 170 RYWTAGGTMRNVPVGAGRR 188
^ = sptrembl|Q9SDF4|Q9SDF4 SIMILAR TO H-PROTEIN PROMOTER BINDING
FACTOR-2A.//:trembl|AP000836|AP000836_22 Oryza sativa genomic DNA,
chromosome 1, clone:P0038F12. //:gp|AP000836|6539573 Similar to
H-protein promoter binding factor-2a (AF079503) [Oryza sativa]
Length = 454
0 90 180 270 360 450
| | | | | |454
sptrembl|Q9SDF4|Q9SDF | __________________________________________________
Local hits (HSPs) | _____
Score = 237 (88.5 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
CPRC+S TKFCY+NNYN+ QPRHFC+NC+RYWT GGA+RN+PVG G R
Sbjct: 80 CPRCNSMETKFCYFNNYNVHQPRHFCRNCQRYWTAGGAMRNVPVGAGRR 128
^ = sptrembl|Q9ZSM2|Q9ZSM2 PUTATIVE DNA-BINDING PROTEIN
(FRAGMENT).//:trembl|AF100333|AF100333_1 gene: "ovg30"; product:
"putative DNA-binding protein"; Dendrobium grex Madame Thong-IN
putative DNA-binding protein (ovg30) mRNA, partial cds.
//:gp|AF100333|3929325 putative DNA-binding protein [Dendrobium
grex Madame Thong-In]
Length = 179
0 40 80 120 160
| | | | | |179
sptrembl|Q9ZSM2|Q9ZSM | __________________________________________________
Local hits (HSPs) | ____________
Score = 228 (85.3 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 35/47 (74%), Positives = 43/47 (91%)
Query: 37 RCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTR 83
RC+S +TKFCYYNNYN++QPRHFCKNC+RYWT GG++RN+PVG G R
Sbjct: 31 RCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRR 77
^ = sptrembl|Q9SXG4|Q9SXG4 DOF ZINC FINGER PROTEIN.//:trembl|AB028133|AB028133_1
product: "Dof zinc finger protein"; Oryza sativa mRNA for Dof zinc
finger protein, complete cds. //:gp|AB028133|4996648 Dof zinc
finger protein [Oryza sativa]
Length = 235
0 50 100 150 200
| | | | | |235
sptrembl|Q9SXG4|Q9SXG | __________________________________________________
Local hits (HSPs) | ________
Score = 190 (71.9 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 30/43 (69%), Positives = 34/43 (79%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIP 77
CPRC S +TKFCY+NNYN++QPRHFCK C RYWT GGA P
Sbjct: 118 CPRCRSRDTKFCYFNNYNVNQPRHFCKACHRYWTAGGASATSP 160
^ = sptrembl|Q9SUB1|Q9SUB1 HYPOTHETICAL 22.1 KDA
PROTEIN.//:trembl|AL161554|ATCHRIV54_12 gene: "AT4g21030"; product:
"putative protein"; Arabidopsis thaliana DNA chromosome 4, contig
fragment No. 54 //:trembl|AL080282|ATT13K14_19 gene: "T13K14.190";
product: "putative protein"; Arabidopsis thaliana DNA chromosome
4, BAC clone T13K14 (ESSA project) //:pironly|T10645|T10645
hypothetical protein T13K14.190 - Arabidopsis
thaliana//:gp|AL080282|5262793 putative protein [Arabidopsis
thaliana]//:gp|AL161554|7268900 putative protein [Arabidopsis
thaliana]
Length = 194
0 40 80 120 160
| | | | | |194
sptrembl|Q9SUB1|Q9SUB | __________________________________________________
Local hits (HSPs) | ___________
Score = 170 (64.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 30/46 (65%), Positives = 33/46 (71%)
Query: 35 CPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGG 80
CPRC S T+F Y+NN SQPR+ CKNC R WT GG LRNIPV G
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTG 68
^ = pironly|T46072|T46072 DNA binding protein - Arabidopsis thaliana (fragment)
Length = 195
0 40 80 120 160
| | | | | |195
pironly|T46072|T46072 | __________________________________________________
Local hits (HSPs) | ______
Score = 105 (42.0 bits), Expect = 0.00038, P = 0.00038
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 63 CRRYWTKGGALRNIPVGGGTR 83
CRRYWT GG LR++PVGGGTR
Sbjct: 2 CRRYWTHGGTLRDVPVGGGTR 22
^ = sptrembl|Q9V1K2|Q9V1K2 HYPOTHETICAL 16.3 KDA
PROTEIN.//:trembl|AJ248284|CNSPAX02_127 product: "hypothetical
protein"; Pyrococcus abyssi complete genome; segment 2/6
//:pironly|D75158|D75158 hypothetical protein PAB2064 - Pyrococcus
abyssi (strain Orsay)//:gp|AJ248284|5457857 hypothetical protein
[Pyrococcus abyssi]
Length = 141
0 30 60 90 120
| | | | | |141
sptrembl|Q9V1K2|Q9V1K | __________________________________________________
Local hits (HSPs) | ____________
Score = 72 (30.4 bits), Expect = 2.8, P = 0.94
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 35 CPRCDSPN-TKFCYY-NNYNLSQPRHFCKNCRRYWTK 69
CP C SPN K Y + N R+ CKNC R +T+
Sbjct: 36 CPYCKSPNIVKIGYIMRSGNFKIQRYKCKNCNRTFTE 72
^ = sptrembl|O26236|O26236 COBALT TRANSPORT ATP-BINDING PROTEIN
CBIO.//:trembl|AE000802|AE000802_10 gene: "MTH133"; product:
"cobalt transport ATP-binding protein O"; Methanobacterium
thermoautotrophicum from bases 79527 to 90689 (section 8 of 148) of
the complete genome. //:pironly|G69043|G69043 cobalt transport
ATP-binding protein O - Methanobacterium thermoautotrophicum
(s//:gp|AE000802|2621173 cobalt transport ATP-binding protein O
[Methanothermobacter thermautotrophicus]
Length = 280
0 60 120 180 240
| | | | | |280
sptrembl|O26236|O2623 | __________________________________________________
Local hits (HSPs) | _________
Score = 76 (31.8 bits), Expect = 3.9, P = 0.98
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 105 KPDHHGSGSEEKEERVSGQ-EMNPTRMLYGLPVG--DPNGASFSSLLASNMQMGGL 157
KP HH SG E+K ++G M P M+ P DP GAS L N+ G+
Sbjct: 137 KPPHHFSGGEKKRVAIAGIIAMKPDIMVLDEPTSGLDPRGASQILRLLHNLNEEGM 192
Parameters:
matrix=BLOSUM62
E=10
V=100
B=100
hspmax=10
filter=seg
echofilter
stats
qtype
qres
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 194 194 10. 76 3 11 22 0.18 33
31 0.22 35
Statistics:
Query Expected Observed HSPs HSPs
Frame MatID High Score High Score Reportable Reported
+0 0 69 (31.4 bits) 898 (408.5 bits) 78 78
Query Neighborhd Word Excluded Failed Successful Overlaps
Frame MatID Words Hits Hits Extensions Extensions Excluded
+0 0 4992 75824931 17902179 57836162 86590 110
Database: /dove2/data/db/nrdb
Title: nrdb Release 28.Mar.2001
Release date: 28.Mar.2001
Posted date: 11:10:06 PM MDT Mar 28, 2001
Last modified: unknown
First created: unknown
Format: BLAST-1.4
# of letters in database: 204,508,729
# of sequences in database: 650,684
# of database sequences satisfying E: 69
No. of states in DFA: 561 (110 KB)
Total size of DFA: 218 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:01
No. of threads or processors used: 4
Search cpu time: 111.14u 3.08s 114.22t Elapsed: 00:01:30
Total cpu time: 111.22u 3.20s 114.42t Elapsed: 00:01:32
Start: Thu Mar 29 16:46:33 2001 End: Thu Mar 29 16:48:05 2001
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