dbEST: database of "Expressed Sequence Tags"

dbEST release 053102

Summary by Organism - May 31, 2002

Number of public entries: 11,813,712

Homo sapiens (human) 4,458,865 Mus musculus + domesticus (mouse) 2,590,400 Rattus sp. (rat) 347,954 Drosophila melanogaster (fruit fly) 256,579 Glycine max (soybean) 255,291 Danio rerio (zebrafish) 247,264 Bos taurus (cattle) 231,577 Hordeum vulgare + subsp. vulgare (barley) 215,495 Xenopus laevis (African clawed frog) 206,276 Caenorhabditis elegans (nematode) 191,248 Arabidopsis thaliana (thale cress) 174,624 Ciona intestinalis 172,824 Triticum aestivum (wheat) 167,472 Medicago truncatula (barrel medic) 162,741 Zea mays (maize) 157,792 Dictyostelium discoideum 153,963 Lycopersicon esculentum (tomato) 148,338 Chlamydomonas reinhardtii 112,487 Oryza sativa (rice) 104,919 Sus scrofa (pig) 103,321 Anopheles gambiae (African malaria mosquito) 94,032 Sorghum bicolor (sorghum) 84,712 Solanum tuberosum (potato) 79,199 Gallus gallus (chicken) 61,550 Physcomitrella patens subsp. patens 50,250 Pinus taeda (loblolly pine) 49,293 Silurana tropicalis 48,318 Oryzias latipes (Japanese medaka) 46,303 Gossypium arboreum 38,894 Lotus japonicus 31,670 Neurospora crassa 28,089 Ascaris suum (pig roundworm) 27,228 Toxoplasma gondii 23,425 Brugia malayi (parasitic nematode) 22,439 Sorghum propinquum 21,387 Hordeum vulgare subsp. spontaneum 21,256 Populus tremula x Populus tremuloides 20,084 Physcomitrella patens 17,488 Mesembryanthemum crystallinum (common ice plant) 17,190 Schistosoma mansoni (blood fluke) 16,815 Xenopus tropicalis 15,946 Apis mellifera 15,395 Onchocerca volvulus 14,922 Bombyx mori (domestic silkworm) 14,878 Eimeria tenella 14,235 Magnaporthe grisea 13,008 Emericella nidulans 12,993 Plasmodium yoelii yoelii 12,471 Strongyloides stercoralis 11,392 Meloidogyne incognita (southern root-knot nematode) 10,899 Ictalurus punctatus (channel catfish) 10,859 Canis familiaris (dog) 10,548 Strongylocentrotus purpuratus (purple urchin) 10,475 Porphyra yezoensis 10,354 Trypanosoma cruzi 10,133 Gossypium hirsutum (upland cotton) 9,452 Tetrahymena thermophila 9,079 Secale cereale 8,872 Pristionchus pacificus 8,818 Strongyloides ratti 8,645 Lycopersicon pennellii 8,346 Plasmodium falciparum (malaria parasite) 8,280 Schizosaccharomyces pombe (fission yeast) 8,123 Parastrongyloides trichosuri 7,963 Ancylostoma caninum (dog hookworm) 7,625 Fusarium sporotrichioides 7,496 Populus balsamifera subsp. trichocarpa 7,394 Meloidogyne hapla 6,365 Ostertagia ostertagi 6,179 Triticum monococcum 6,010 Globodera rostochiensis 5,934 Meloidogyne javanica (root-knot nematode) 5,600 Stevia rebaudiana 5,548 Plasmodium berghei 5,345 Sarcocystis neurona 4,949 Blumeria graminis f. sp. hordei 4,908 Haemonchus contortus 4,906 Trypanosoma brucei rhodesiense 4,821 Ancylostoma ceylanicum 4,476 Equus caballus (horse) 4,343 Heterodera glycines (soybean cyst nematode) 4,327 Trichinella spiralis 4,247 Toxocara canis 4,206 Halocynthia roretzi 4,192 Pneumocystis carinii f. sp. carinii 3,896 Ceratopteris richardii 3,587 Salmo salar 3,562 Meloidogyne arenaria 3,334 Plasmodium falciparum 3D7 3,254 Dirofilaria immitis 3,134 Neospora caninum 3,121 Plasmodium yoelii 3,091 Saccharomyces cerevisiae (baker's yeast) 3,041 Glomus intraradices 2,963 Aegilops speltoides 2,955 Brassica rapa subsp. pekinensis (Chinese cabbage) 2,933 Robinia pseudoacacia 2,933 Rosa hybrid cultivar 2,874 Dunaliella salina 2,833 Paralichthys olivaceus 2,702 Beta vulgaris (beet) 2,650 Aspergillus niger 2,533 Lycopersicon hirsutum 2,504 Coccidioides immitis 2,463 Cryptomeria japonica (Japanese cedar) 2,438 Caenorhabditis briggsae 2,424 Vitis vinifera 2,259 Schistosoma japonicum (blood fluke) 2,202 Leishmania major 2,191 Phytophthora infestans 2,139 Trichuris muris 2,125 Oryctolagus cuniculus (rabbit) 2,119 Pleurotus ostreatus (oyster mushroom) 2,024 Phytophthora sojae 2,004 Amblyomma americanum 1,971 Globodera pallida 1,832 Brassica napus (oilseed rape) 1,774 Echinococcus granulosus 1,739 Triphysaria versicolor 1,695 Metarhizium anisopliae 1,693 Ceratodon purpureus 1,677 Manduca sexta (tobacco hornworm) 1,626 Litopenaeus vannamei 1,569 Triticum turgidum subsp. durum 1,526 Aedes aegypti (yellow fever mosquito) 1,523 Euphorbia esula (leafy spurge) 1,523 Avicennia marina 1,443 Biomphalaria glabrata 1,426 Marchantia polymorpha (liverwort) 1,415 Triticum turgidum 1,380 Mentha x piperita (peppermint) 1,316 Citrus unshiu 1,251 Metarhizium anisopliae var. acridum 1,222 Sorghum halepense (Johnson grass) 1,179 Marsupenaeus japonicus 1,170 Mycosphaerella graminicola 1,158 Pyricularia grisea (rice blast fungus) 1,152 Hypocrea jecorina 1,129 Thellungiella salsuginea 1,064 Litopenaeus setiferus 1,042 Suaeda maritima subsp. salsa 1,000 Phaeodactylum tricornutum 997 Brassica campestris (field mustard) 963 Necator americanus 961 Laminaria digitata 937 Glycine clandestina 933 Pleuronectes americanus (winter flounder) 915 Helianthus annuus 908 Sarcoptes scabiei 891 Ambystoma mexicanum 887 Crassostrea virginica 856 Manihot esculenta (cassava) 851 Ictalurus furcatus 849 Mastigamoeba balamuthi 814 Ricinus communis (castor bean) 750 Nippostrongylus brasiliensis 734 Fusarium graminearum 713 Allium cepa (onion) 693 Citrullus lanatus (watermelon) 693 Medicago sativa (alfalfa) 688 Bothrops insularis 677 Thellungiella halophila 675 Penaeus monodon 673 Malus x domestica (apple tree) 642 Antheraea yamamai 610 Cyprinus carpio (common carp) 606 Cladosporium fulvum 595 Lumbricus rubellus 577 Pyrococcus furiosus (hyperthermophilic archaeon) 577 Cryptosporidium parvum 567 Crocus sativus 522 Ichthyophthirius multifiliis 511 Saccharum sp. 495 Avena sativa (oat) 492 Melaleuca alternifolia 491 Agaricus bisporus 477 Polyandrocarpa misakiensis 465 Entamoeba histolytica 463 Oncorhynchus mykiss (rainbow trout) 459 Coffea arabica 453 Guillardia theta 453 Branchiostoma belcheri 452 Heterobasidion annosum 427 Descurainia sophia 407 Scherffelia dubia 393 Zeldia punctata 391 Pisolithus tinctorius 379 Acanthamoeba healyi 377 Schizophyllum commune 371 Macaca mulatta (rhesus monkey) 368 Lupinus luteus 364 Marmota monax 333 Nicotiana tabacum (tobacco) 330 Teladorsagia circumcincta 315 Citrus x paradisi 312 Euphorbia lagascae 298 Rhagoletis pomonella 296 Oreochromis niloticus (Nile tilapia) 294 Seriola quinqueradiata (five-ray yellowtail) 275 Cucumis sativus (cucumber) 261 Drosophila simulans 259 Capsicum annuum 252 Capra hircus (goat) 245 Araneus ventricosus 234 Felis catus (cat) 228 Bombyx mandarina (wild silkworm) 226 Ipomoea batatas 215 Echinostoma paraensei 213 Pisum sativum (pea) 212 Tuber borchii (whitish truffle) 212 Prunus persica 201 Gracilaria gracilis 200 Litomosoides sigmodontis 198 Anguilla japonica 196 Cavia porcellus 196 Trypanosoma brucei brucei 196 Botryllus schlosseri 191 Columba livia 174 Gracilaria lemaneiformis 164 Citrus sinensis 151 Tortula ruralis 147 Boophilus microplus 143 Entamoeba dispar 139 Meleagris gallopavo (common turkey) 137 Wuchereria bancrofti 131 Leptosphaeria maculans 121 Trypanosoma brucei 116 Oikopleura dioica 114 Crassostrea gigas 112 Gillichthys mirabilis (long-jawed mudsucker) 109 Laccaria bicolor 107 Dianthus caryophyllus (clove pink) 105 Hebeloma cylindrosporum 105 Cynodon dactylon 98 Raphanus sativus (radish) 94 Eucalyptus globulus (blue gum) 93 Giardia intestinalis 91 Clonorchis sinensis 88 Pseudotsuga menziesii (Douglas fir) 87 Platichthys flesus 85 Sesbania rostrata 85 Sus scrofa domestica (domestic pig) 83 Chlamydomonas sp. W80 82 Bruguiera gymnorhiza 75 Pyrocoelia rufa 71 Castanea dentata 70 Pinus radiata (Monterey pine) 69 Ovis aries (sheep) 65 Prunus dulcis 64 Salvelinus alpinus 63 Gillichthys seta 62 Onchocerca ochengi 60 Gigaspora rosea 59 Capsicum chinense 57 Paxillus involutus 55 Fragaria x ananassa (strawberry) 53 Vigna unguiculata (cowpea) 45 Filobasidiella neoformans (Cryptococcus neoformans) 44 Epinephelus coioides 42 Macropus eugenii (tammar wallaby) 42 Torpedo marmorata (marbled electric ray) 41 Culex pipiens pallens 40 Marsilea vestita 40 Picea abies (Norway spruce) 39 Chlamydomonas sp. HS-5 38 Fusarium solani f. sp. glycines 37 Haematobia irritans irritans 36 Capreolus capreolus (roe deer) 35 Phaseolus vulgaris (French bean) 35 Aspergillus fumigatus 34 Trichoplusia ni (cabbage looper) 34 Amanita muscaria (fly agaric) 33 Hippoglossus hippoglossus (Atlantic halibut) 32 Mycobacterium smegmatis 30 Mycobacterium tuberculosis 30 Poa secunda 30 Brugia pahangi 28 Dermacentor variabilis 28 Fundulus heteroclitus 28 Nicotiana attenuata 28 Populus alba x Populus tremula (gray poplar) 28 Loa loa 27 Daucus carota (carrot) 26 Galleria mellonella 26 Pinus pinaster 25 Solanum sogarandinum 25 Vigna angularis (adzuki bean) 25 Anopheles stephensi 24 Tetraodon fluviatilis 24 Populus balsamifera subsp. trichocarpa X Populus deltoides 23 Cicer arietinum (chickpea) 22 Taxus cuspidata 22 Dactylis glomerata 21 Leishmania infantum 21 Panax ginseng 21 Prunus avium 21 Ageratum conyzoides 20 Brassica juncea (leaf mustard) 19 Candida albicans 19 Vespertilio superans 19 Medicago sativa subsp. x varia 18 Theileria parva 18 Cervus nippon 17 Diospyros kaki 17 Globodera mexicana 17 Sphenodon punctatus 17 Vigna radiata (mung bean) 17 Isaria japonica 16 Peronospora parasitica 16 Solanum phureja x Solanum tuberosum 16 Euplotes crassus 15 Pyrus pyrifolia 15 Heterodera schachtii 14 Lapemis hardwickii 14 Petromyzon marinus (sea lamprey) 14 Boltenia villosa 13 Chenopodium amaranticolor 13 Medicago sativa nothosubsp. varia 13 Anagasta kuehniella 12 Bruguiera sexangula 12 Cyclopterus lumpus 12 Mesocricetus auratus (Syrian golden hamster) 12 Oesophagostomum dentatum 12 Prunus cerasus 12 Solanum lycopersicum (tomato) 12 Brassica rapa (field mustard) 11 Lentinula edodes 11 Loligo pealei 11 Nicotiana benthamiana 11 Streptocarpus saxorum 11 Datura innoxia 10 Poecilia reticulata (guppy) 10 Urechis caupo 10 Cricetulus griseus (Chinese hamster) 9 Fucus vesiculosus 9 Glomus mosseae 9 Rana catesbeiana 9 Sulfurospirillum barnesii 9 Trichostrongylus vitrinus 9 Trifolium purpureum 9 Papaver somniferum 8 Pennisetum ciliare (buffelgrass) 8 Scutellospora castanea 8 Haematobia irritans 7 Homarus americanus 7 Mycoplasma hyorhinis 7 Plasmodiophora brassicae 7 Acetabularia acetabulum 6 Bacteroides fragilis 6 Cricetinae gen. sp. (hamster) 6 Cucumis melo (muskmelon) 6 Gadus morhua 6 Schistosoma haematobium 6 Theileria annulata 6 Triatoma brasiliensis 6 Xiphophorus maculatus x Xiphophorus helleri 6 Zinnia elegans 6 Aerides japonica 5 Cervus elaphus 5 Mangifera indica 5 Paracoccidioides brasiliensis 5 Periplaneta americana 5 Tupaia belangeri 5 Vitis labrusca 5 Atriplex canescens 4 Branchiostoma floridae (Florida lancelet) 4 Clupea harengus 4 Fucus distichus 4 Galega orientalis 4 Paramecium tetraurelia 4 Periophthalmus modestus 4 Picea sitchensis (Sitka spruce) 4 Streptocarpus rexii 4 Streptocarpus dunnii 4 Angiostrongylus cantonensis 3 Artemia parthenogenetica 3 Griffithsia japonica 3 Ixodes ricinus 3 Saprolegnia parasitica 3 Silene latifolia 3 Solanum melongena 3 Allium sativum 2 Boea crassifolia 2 Bubalus arnee bubalis (water buffalo) 2 Circulifer tenellus (beet leafhopper) 2 Dictyocaulus viviparus (bovine lungworm) 2 Elaeis oleifera 2 Eptatretus cirrhatus 2 Hevea brasiliensis (Para rubber tree) 2 Labeo rohita 2 Musca domestica 2 Tagetes erecta 2 Ajellomyces capsulatus 1 Aphis gossypii 1 Catla catla 1 Chaetoceros compressum 1 Cocos nucifera 1 Eleutherococcus senticosus 1 Geotria australis 1 Hoplodactylus maculatus 1 Hydra vulgaris 1 Leishmania mexicana mexicana 1 Marsilea quadrifolia 1 Mustela putorius furo 1 Narcissus pseudonarcissus (daffodil) 1 Oncorhynchus keta 1 Planococcus lilacinus (lilac mealybug) 1 Procambarus clarkii 1 Vicia faba 1