RepeatMasker summary: ================================================== file name: RMemail18880.seq sequences: 1 total length: 2481 bp (2481 bp excl N-runs) GC level: 54.86 % bases masked: 69 bp ( 2.78 %) ================================================== number of length percentage elements* occupied of sequence -------------------------------------------------- SINEs: 1 69 bp 2.78 % ALUs 0 0 bp 0.00 % MIRs 1 69 bp 2.78 % LINEs: 0 0 bp 0.00 % LINE1 0 0 bp 0.00 % LINE2 0 0 bp 0.00 % L3/CR1 0 0 bp 0.00 % LTR elements: 0 0 bp 0.00 % MaLRs 0 0 bp 0.00 % ERVL 0 0 bp 0.00 % ERV_classI 0 0 bp 0.00 % ERV_classII 0 0 bp 0.00 % DNA elements: 0 0 bp 0.00 % MER1_type 0 0 bp 0.00 % MER2_type 0 0 bp 0.00 % Unclassified: 0 0 bp 0.00 % Total interspersed repeats: 69 bp 2.78 % Small RNA: 0 0 bp 0.00 % Satellites: 0 0 bp 0.00 % Simple repeats: 0 0 bp 0.00 % Low complexity: 0 0 bp 0.00 % ================================================== * most repeats fragmented by insertions or deletions have been counted as one element The sequence(s) were assumed to be of primate origin. RepeatMasker version 07/07/2001 , default mode run with cross_match version 0.990329 RepBase Update 6.3, vs 05152001 Repeats: SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 271 21.7 4.3 1.4 human 1318 1386 (1095) C MIR SINE/MIR (131) 131 61 1 Masked Sequence: >human AGCTTTCTTCTTTTCCCTGTTGCTCAAATAAATAGTGTTCTTTGCTCAAA CCCCCTTTCCCTCCTCCTTCTGCAATCTCAGCGCCTAGCGAAATCTGTTT TCTTCATTGTAACCTCAGCTTCACCGCAATTAATTTTTTTTCCCTCTGGT CACAAGATAATTCCTGACGCCAGTGAGTCTGGAGGTCAGACGAACAGCAA ATTGGGGAACAAGGCGGCACTAATTCCTTACAAGTTCCTTGAAAAATCTT TCGCTTAAAAAAAACGGGGGGTGGGGGGAGCTTCTTTGCTGTTCAGGGAT TTATGCCTCGCGGAGCTGTGGCTCGAACCAGTGTTGGCTAAGGCGGACTG GCAGGGGCAGGGAAGCTCAAAGATCTGGGGTGCTGCCAGGAAAAAGCAAA TTCTGGAAGTTAATGGTTTTGAGTGATTTTTAAATCCTTGCTGGCGGAGA GGCCCGCCTCTCCCCGGTATCAGCGCTTCCTCATTCTTTGAATCCGCGGC TCCGCGGTCTTCGGCGTCAGACCAGCCGGAGGAAGCCTGTTTGCAATTTA AGCGGGCTGTGAACGCCCAGGGCCGGCGGGGGCAGGGCCGAGGCGGGCCA TTTTGAATAAAGAGGCGTGCCTTCCAGGCAGGCTCTATAAGTGACCGCCG CGGCGAGCGTGCGCGCGTTGCAGGTCACTGTAGCGGACTTCTTTTGGTTT TCTTTCTCTTTGGGGCACCTCTGGACTCACTCCCCAGCATGAAGGCGCTG AGCCCGGTGCGCGGCTGCTACGAGGCGGTGTGCTGCCTGTCGGAACGCAG TCTGGCCATCGCCCGGGGCCGAGGGAAGGGCCCGGCAGCTGAGGAGCCGC TGAGCTTGCTGGACGACATGAACCACTGCTACTCCCGCCTGCGGGAACTG GTACCCGGAGTCCCGAGAGGCACTCAGCTTAGCCAGGTGGAAATCCTACA GCGCGTCATCGACTACATTCTCGACCTGCAGGTAGTCCTGGCCGAGCCAG CCCCTGGACCCCCTGATGGCCCCCACCTTCCCATCCAGGTAAGCCTCGAA GTCGGGACAGGGCTGAACACCCAGGCAAGGATGCTGCGGGACCCTCGGAG CTCCCGATTGCCTCGCGTAACTCTTCCCTCTTTTCCTCTAATCAGACAGC CGAGCTCGCTCCGGAACTTGTCATCTCCAACGACAAAAGGAGCTTTTGCC ACTGACTCGGCCGTGTCCTGACACCTCCAGGTGAGTATCTCCTCTCTTGG AGAGGGAGGTTTAAACGGCAAGTCCTGGAGTTGGCAGACGTTTTGAAAAA TTGCCACTCACTCGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCCATGTGATGT GCATTTAAGCCTTAATGCGCCTGGCCCTGCCTCCGCAGTGGCCGAGGTCT GGCAAGTAGACATGGTCCGACTAAATACAAGTCTTTCTGTTCCATGTTGT ATAGGAGCTGTCTTCGGCAGCCCCCTCCCAGCTAGTGTCAATTCCAAGTA GGAGGGGTAGCGCAACGTCCGCCTGTGGTCTTTGGCGCCAACTGGGTGGG GGCAGCGTGGGGGGCGGAGTTATCAGGCTGGAGGTACAGACCAAGTTTCC TCCCTGGCGCCGGCCAGTCTGCGGACGGCCCCCGCCTCGGCACGCTCGGC GGAAACTGACTGCTCCTTGGTCTTCTTTCCTCCCCCGCCCAGAACGCAGG TGCTGGCGCCCGTTCTGCCTGGGACCCCGGGAACCTCTCCTGCCGGAAGC CGGACGGCAGGGATGGGCCCCAACTTCGCCCTGCCCACTTGACTTCACCA AATCCCTTCCTGGAGACTAAACCTGGTGCTCAGGAGCGAAGGACTGTGAA CTTGTGGCCTGAAGAGCCAGAGCTAGCTCTGGCCACCAGCTGGGCGACGT CACCCTGCTCCCACCCCACCCCCAAGTTCTAAGGTCTTTTCAGAGCGTGG AGGTGTGGAAGGAGTGGCTGCTCTCCAAACTATGCCAAGGCGGCGGCAGA GCTGGTCTTCTGGTCTCCTTGGAGAAAGGTTCTGTTGCCCTGATTTATGA ACTCTATAATAGAGTATATAGGTTTTGTACCTTTTTTACAGGAAGGTGAC TTTCTGTAACAATGCGATGTATATTAAACTTTTTATAAAAGTTAACATTT TGCATAATAAACGATTTTTAAACACTTGTGTATATGATGACACCCGTCTC CATTAAGTACTAATGATGCTTTCTCGCACATGGCCGAATTTTGGGAGCTT TGGGAAAGTGAACTTGCTTATTCTACGAGAGGGAAATGAAAAACTGCCTG GTTGAGAGGGGATGGGGTGGAGAGAGAAGGGTTCATGATGGGAGTCTCAT GTCCATTGAGGGATGGGTGCAGAGAAAAGTTCTGGCTCTGCCTCATTATT TCAGAGATGAAACCAGAGACTGGTGCAAGCT