REMARK 1 lists important publications related to the structure presented in the entry. These citations are chosen by the depositor. They are listed in reverse-chronological order. Citations are not repeated from the JRNL records. After the first blank record and the REFERENCE sub-record, the sub-record types for REMARK 1 are the same as in the JRNL sub-record types. For details, see the JRNL section.
PDB is in the process of linking and/or adding references to CitDB, the literature database of the Genome Data Base (available at URL http://gdbwww.gdb.org/gdb-bin/genera/genera/citation/Citation).
Record Format and Details
As with all other remarks, the first line is empty and is used as a spacer.
The following tables are used to describe the sub-record types of REMARK 1.
1. REFERENCE
Each reference is preceded by a line indicating the reference number in the entry.
COLUMNS DATA TYPE FIELD DEFINITION
--------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
12 - 20 LString(9) "REFERENCE"
22 - 70 Integer refNum Reference number. Starts with
1 and increments by 1.
2. AUTH
AUTH contains the list of authors of the reference.
COLUMNS DATA TYPE FIELD DEFINITION
-------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(4) "AUTH" Appears on all continuation
records.
17 - 18 Continuation continuation Allows a long list of authors.
20 - 70 List authorList List of the authors.
See JRNL AUTH for details.
3. TITL
TITL specifies the title of the reference.
COLUMNS DATA TYPE FIELD DEFINITION
-------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(4) "TITL" Appears on all continuation
records.
17 - 18 Continuation continuation Permits long titles.
20 - 70 LString title Title of the article.
See JRNL TITL for details.
4. EDIT
EDIT appears if editors are associated with a non-journal reference.
COLUMNS DATA TYPE FIELD DEFINITION
-------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(4) "EDIT" Appears on all continuation
records.
17 - 18 Continuation continuation Permits long list of editors.
20 - 70 LString editorList List of the editors.
See JRNL EDIT for details.
5. REF
REF is a group of fields which contains the name of the publication.
5a. If it hasnot yet been published, the REF sub-record type has the form:
COLUMNS DATA TYPE FIELD DEFINITION ------------------------------------------------------------------------------- 1 - 6 Record name "REMARK" 10 LString(1) "1" 13 - 16 LString(3) "REF" 20 - 34 LString(15) "TO BE PUBLISHED"
At the present time, there is no formal mechanism in place for monitoring the subsequent publication of referenced papers. PDB relies upon the depositor to provide reference update information since preliminary information can change by the time of actual publication.
5b. If the referencehas been published, then the REF sub-record type group contains information about the name of the publication, supplement, report, volume, page, and year, in the appropriate fields.
COLUMNS DATA TYPE FIELD DEFINITION
---------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(3) "REF"
17 - 18 Continuation continuation Permits long publication names.
20 - 47 LString pubName Name of the publication including
section or series designation.
This is the only field of this
record which may be continued on
successive records.
50 - 51 LString(2) "V." Appears in the first record only,
and only if column 55 is filled in.
52 - 55 String volume Right-justified blank-filled volume
information; appears in the first
sub-record only.
57 - 61 String page First page of the article; appears
in the first sub-record only.
63 - 66 Integer year Year of publication, first record
only.
See JRNL REF for details.
6. PUBL
PUBL contains the name of the publisher and place of publication if the reference is to a book or other non-journal publication. If the reference has not yet been published or released, this sub-record is absent.
COLUMNS DATA TYPE FIELD DEFINITION
---------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(4) "PUBL"
17 - 18 Continuation continuation Permits long publisher and city
information.
20 - 70 LString pub Name of the publisher and city of
publication.
See JRNL PUBL for details.
7. REFN
REFN is a group of fields which contains encoded references to the citation.
7a. If the citation hasnot been published, this form of the REFN sub-record type group is used.
COLUMNS DATA TYPE FIELD DEFINITION
-------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(4) "REFN"
67 - 70 LString(4) "0353" This is the PDB coden for unpublished
works.
7b. If the citationhas been published, this form of the REFN sub-record type group is used.
COLUMNS DATA TYPE FIELD DEFINITION
--------------------------------------------------------------------------------
1 - 6 Record name "REMARK"
10 LString(1) "1"
13 - 16 LString(4) "REFN"
20 - 23 LString(4) "ASTM" Blank if reference is not
serialized.
25 - 30 LString astm Code from the ASTM file.
33 - 34 LString country 2-digit abbreviation for
country of publication.
36 - 39 LString(4) "ISBN" or
"ISSN"
41 - 65 LString isbn ISSN or ISBN number.
68 - 70 LString(4) coden Number from Cambridge
Crystallographic Data Center
coden list, or assigned by the
PDB.
See JRNL REFN for details.
Verification/Validation/Value Authority Control
PDB verifies that this record is correctly formatted.
PDB uses MEDLINE to verify the accuracy of references and to obtain information required for CitDB that is not required by the PDB listing. The process of using MEDLINE requires following the National Library of Medicine rules for the transcription of names and titles. Articles in non-MEDLINE journals are verified through other online databases or with the reprint in hand. Verification of book references is done using online cooperative or individual library catalogs.
Citations appearing in REMARK 1 may not appear in JRNL.
Relationships to Other Record Types
Citations appearing in REMARK 1 may not appear in JRNL.
Example
1 2 3 4 5 6 7
1234567890123456789012345678901234567890123456789012345678901234567890
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH A.M.BONVIN,J.A.RULLMANN,R.M.LAMERICHS,R.BOELENS,
REMARK 1 AUTH 2 R.KAPTEIN
REMARK 1 TITL "ENSEMBLE" ITERATIVE RELAXATION MATRIX APPROACH:
REMARK 1 TITL 2 A NEW NMR REFINEMENT PROTOCOL APPLIED TO THE
REMARK 1 TITL 3 SOLUTION STRUCTURE OF CRAMBIN
REMARK 1 REF PROTEINS: STRUCT.,FUNCT., V. 15 385 1993
REMARK 1 REF 2 GENET.
REMARK 1 REFN ASTM PSFGEY US ISSN 0887-3585 0867
REMARK 1 REFERENCE 2
REMARK 1 AUTH J.A.C.RULLMANN,A.M.J.J.BONVIN,R.BOELENS,R.KAPTEIN
REMARK 1 TITL STRUCTURE DETERMINATION BY NMR - APPLICATION TO
REMARK 1 TITL 2 CRAMBIN
REMARK 1 EDIT D.M.SOUMPASIS,T.M.JOVIN
REMARK 1 REF COMPUTATION OF BIOMOLECULAR 1 1992
REMARK 1 REF 2 STRUCTURES; ACHIEVEMENTS,
REMARK 1 REF 3 PROBLEMS, AND PERSPECTIVES
REMARK 1 PUBL BERLIN : SPRINGER-VERLAG
REMARK 1 REFN GW ISBN 3540559515 2010
REMARK 1 REFERENCE 3
REMARK 1 AUTH R.M.J.M.LAMERICHS
REMARK 1 REF 2D NMR STUDIES OF 1989
REMARK 1 REF 2 BIOMOLECULES: PROTEIN
REMARK 1 REF 3 STRUCTURE AND PROTEIN-DNA
REMARK 1 REF 4 INTERACTIONS
REMARK 1 PUBL UTRECHT : UNIVERSITY OF UTRECHT (THESIS)
REMARK 1 REFN NE 2011
REMARK 1
REMARK 1 REFERENCE 1
REMARK 1 AUTH G.FERMI,M.F.PERUTZ
REMARK 1 REF HAEMOGLOBIN AND MYOGLOBIN 1981
REMARK 1 REF 2 (IN: ATLAS OF MOLECULAR
REMARK 1 REF 3 STRUCTURES IN BIOLOGY, V.2)
REMARK 1 PUBL OXFORD : CLARENDON PRESS
REMARK 1 REFN ISBN 0-19-854706-4 0986
Known Problems
See JRNL for a listing of problems associated with references.