BLASTP 2.2.3 [Apr-24-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= d1bgc__:a.26.1.1 (165 letters) Database: /data/tmp/fabascal/DBASE/scop+nr100.faa.nrdb90.reformated 475,909 sequences; 166,026,790 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) 275 1e-73 tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu 232 6e-61 sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre 230 3e-60 sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p 217 3e-56 tr|:P97712 (P97712) Granulocyte colony stimulating factor 196 7e-50 sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p 187 2e-47 tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor 151 2e-36 sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( 98 2e-20 >scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) Length = 165 Score = 275 bits (702), Expect = 1e-73 Identities = 154/165 (93%), Positives = 154/165 (93%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP Sbjct: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPLSSCSSQ 60 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA Sbjct: 61 SLQLRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA Sbjct: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 >tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu Length = 195 Score = 232 bits (592), Expect = 6e-61 Identities = 128/163 (78%), Positives = 135/163 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRK+QADG LQERLCAAHKLCHPEEL+LL H+LGIPQAP Sbjct: 29 SLPQSFLLKCLEQVRKVQADGTALQERLCAAHKLCHPEELVLLGHALGIPQAPLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCL QLH GLFLYQGLLQALAGISPELAPTLD LQLD+TDFA NIW QMED+G A Sbjct: 89 ALQLTGCLRQLHSGLFLYQGLLQALAGISPELAPTLDMLQLDITDFAINIWQQMEDVGMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRY 163 PAV PTQG MPTFTSAFQRRAGG LVAS L FLE+AYR LR+ Sbjct: 149 PAVPPTQGTMPTFTSAFQRRAGGTLVASNLQSFLEVAYRALRH 191 >sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre Length = 195 Score = 230 bits (586), Expect = 3e-60 Identities = 133/165 (80%), Positives = 137/165 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCA HKLCHP+EL+LL HSLG+PQA Sbjct: 29 SLPQSFLLKCLEQVRKIQADGAELQERLCATHKLCHPQELVLLGHSLGLPQASLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCLNQLHGGL LYQGLLQALAGISPELAP LD LQLDVTD ATNIWLQMEDL A Sbjct: 89 ALQLTGCLNQLHGGLVLYQGLLQALAGISPELAPALDILQLDVTDLATNIWLQMEDLRMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PA PTQG +PTFTSAFQRRAGGVLV SQL FLELAYR LRYLA Sbjct: 149 PASLPTQGTVPTFTSAFQRRAGGVLVVSQLQSFLELAYRVLRYLA 193 >sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p Length = 207 Score = 217 bits (552), Expect = 3e-56 Identities = 126/168 (75%), Positives = 135/168 (80%), Gaps = 3/168 (1%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERL---CAAHKLCHPEELMLLRHSLGIPQAPXXXX 57 SLPQSFLLKCLEQVRKIQ DGA LQE+L CA +KLCHPEEL+LL HSLGIP AP Sbjct: 38 SLPQSFLLKCLEQVRKIQGDGAALQEKLVSECATYKLCHPEELVLLGHSLGIPWAPLSSC 97 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 GCL+QLH GLFLYQGLLQAL GISPEL PTLDTLQLDV DFAT IW QME+L Sbjct: 98 PSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEEL 157 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 G APA+QPTQGAMP F SAFQRRAGGVLVAS L FLE++YR LR+LA Sbjct: 158 GMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLA 205 >tr|:P97712 (P97712) Granulocyte colony stimulating factor Length = 214 Score = 196 bits (497), Expect = 7e-50 Identities = 111/163 (68%), Positives = 120/163 (73%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA EL E+LCA +KLCHPEEL+L HSLGIP+A Sbjct: 36 LPRSFLLKSLEQVRKIQARNTELLEQLCATYKLCHPEELVLFGHSLGIPKASLSSCSSQA 95 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GLFLYQGLLQALAGIS ELAPTLD L LDV +FAT IW QME LG AP Sbjct: 96 LQQTKCLSQLHSGLFLYQGLLQALAGISSELAPTLDMLHLDVDNFATTIWQQMESLGVAP 155 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYL 164 VQPTQ MP FTSAFQRRAGGVLV S L FLE A+ L +L Sbjct: 156 TVQPTQSTMPIFTSAFQRRAGGVLVTSYLQSFLETAHHALHHL 198 >sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p Length = 208 Score = 187 bits (475), Expect = 2e-47 Identities = 112/164 (68%), Positives = 123/164 (74%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA G+ L E+LCA +KLCHPEEL+LL HSLGIP+A Sbjct: 45 LPRSFLLKSLEQVRKIQASGSVLLEQLCATYKLCHPEELVLLGHSLGIPKASLSGCSSQA 104 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GL LYQGLLQAL+GISP LAPTLD LQLDV +FAT IW QME+LG AP Sbjct: 105 LQQTQCLSQLHSGLCLYQGLLQALSGISPALAPTLDLLQLDVANFATTIWQQMENLGVAP 164 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 VQPTQ AMP FTSAFQRRAGGVL S L FLE A L +LA Sbjct: 165 TVQPTQSAMPAFTSAFQRRAGGVLAISYLQGFLETARLALHHLA 208 >tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor Length = 127 Score = 151 bits (381), Expect = 2e-36 Identities = 98/125 (78%), Positives = 99/125 (78%) Query: 41 MLLRHSLGIPQAPXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQ 100 MLL HSLGIPQ GCL+QLH GL LYQGLLQALAGISPELAPTLD LQ Sbjct: 1 MLLGHSLGIPQPLLSSCSSQALQLTGCLSQLHSGLLLYQGLLQALAGISPELAPTLDMLQ 60 Query: 101 LDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRG 160 LDVTDFATNIW QMEDLG AP VQPT G MPTF SAFQRRAGGVLVAS L RFLELAYRG Sbjct: 61 LDVTDFATNIWQQMEDLGVAPVVQPTHGPMPTFASAFQRRAGGVLVASNLQRFLELAYRG 120 Query: 161 LRYLA 165 LRYLA Sbjct: 121 LRYLA 125 >sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( Length = 201 Score = 97.8 bits (242), Expect = 2e-20 Identities = 63/164 (38%), Positives = 84/164 (50%), Gaps = 2/164 (1%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXX 63 Q FL K LE RKI+ D A LQ +C +LC EEL L++ + QAP Sbjct: 36 QLFLHKNLEFTRKIRGDVAALQRAVCDTFQLCTEEELQLVQPDPHLVQAPLDQCHKRGFQ 95 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 C Q+ GL Y L A+ + P ++TLQLD + ++NI QMEDLG Sbjct: 96 AEVCFTQIRAGLHAYHDSLGAVLRLLPNHTTLVETLQLDAANLSSNIQQQMEDLGLDTVT 155 Query: 124 QPTQ--GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 P + PTF+ FQ++ GG + + RFLE AYR LR+LA Sbjct: 156 LPAEQRSPPPTFSGPFQQQVGGFFILANFQRFLETAYRALRHLA 199 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) 261 1e-69 tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu 257 2e-68 sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p 250 4e-66 sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre 247 2e-65 tr|:P97712 (P97712) Granulocyte colony stimulating factor 244 1e-64 sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p 236 5e-62 sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( 215 6e-56 tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor 170 3e-42 Sequences not found previously or not previously below threshold: tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor 52 2e-06 >scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) Length = 165 Score = 261 bits (668), Expect = 1e-69 Identities = 154/165 (93%), Positives = 154/165 (93%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP Sbjct: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPLSSCSSQ 60 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA Sbjct: 61 SLQLRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA Sbjct: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 >tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu Length = 195 Score = 257 bits (658), Expect = 2e-68 Identities = 128/163 (78%), Positives = 135/163 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRK+QADG LQERLCAAHKLCHPEEL+LL H+LGIPQAP Sbjct: 29 SLPQSFLLKCLEQVRKVQADGTALQERLCAAHKLCHPEELVLLGHALGIPQAPLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCL QLH GLFLYQGLLQALAGISPELAPTLD LQLD+TDFA NIW QMED+G A Sbjct: 89 ALQLTGCLRQLHSGLFLYQGLLQALAGISPELAPTLDMLQLDITDFAINIWQQMEDVGMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRY 163 PAV PTQG MPTFTSAFQRRAGG LVAS L FLE+AYR LR+ Sbjct: 149 PAVPPTQGTMPTFTSAFQRRAGGTLVASNLQSFLEVAYRALRH 191 >sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p Length = 207 Score = 250 bits (638), Expect = 4e-66 Identities = 126/168 (75%), Positives = 135/168 (80%), Gaps = 3/168 (1%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERL---CAAHKLCHPEELMLLRHSLGIPQAPXXXX 57 SLPQSFLLKCLEQVRKIQ DGA LQE+L CA +KLCHPEEL+LL HSLGIP AP Sbjct: 38 SLPQSFLLKCLEQVRKIQGDGAALQEKLVSECATYKLCHPEELVLLGHSLGIPWAPLSSC 97 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 GCL+QLH GLFLYQGLLQAL GISPEL PTLDTLQLDV DFAT IW QME+L Sbjct: 98 PSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEEL 157 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 G APA+QPTQGAMP F SAFQRRAGGVLVAS L FLE++YR LR+LA Sbjct: 158 GMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLA 205 >sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre Length = 195 Score = 247 bits (631), Expect = 2e-65 Identities = 133/165 (80%), Positives = 137/165 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCA HKLCHP+EL+LL HSLG+PQA Sbjct: 29 SLPQSFLLKCLEQVRKIQADGAELQERLCATHKLCHPQELVLLGHSLGLPQASLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCLNQLHGGL LYQGLLQALAGISPELAP LD LQLDVTD ATNIWLQMEDL A Sbjct: 89 ALQLTGCLNQLHGGLVLYQGLLQALAGISPELAPALDILQLDVTDLATNIWLQMEDLRMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PA PTQG +PTFTSAFQRRAGGVLV SQL FLELAYR LRYLA Sbjct: 149 PASLPTQGTVPTFTSAFQRRAGGVLVVSQLQSFLELAYRVLRYLA 193 >tr|:P97712 (P97712) Granulocyte colony stimulating factor Length = 214 Score = 244 bits (624), Expect = 1e-64 Identities = 111/163 (68%), Positives = 120/163 (73%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA EL E+LCA +KLCHPEEL+L HSLGIP+A Sbjct: 36 LPRSFLLKSLEQVRKIQARNTELLEQLCATYKLCHPEELVLFGHSLGIPKASLSSCSSQA 95 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GLFLYQGLLQALAGIS ELAPTLD L LDV +FAT IW QME LG AP Sbjct: 96 LQQTKCLSQLHSGLFLYQGLLQALAGISSELAPTLDMLHLDVDNFATTIWQQMESLGVAP 155 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYL 164 VQPTQ MP FTSAFQRRAGGVLV S L FLE A+ L +L Sbjct: 156 TVQPTQSTMPIFTSAFQRRAGGVLVTSYLQSFLETAHHALHHL 198 >sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p Length = 208 Score = 236 bits (602), Expect = 5e-62 Identities = 112/164 (68%), Positives = 123/164 (74%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA G+ L E+LCA +KLCHPEEL+LL HSLGIP+A Sbjct: 45 LPRSFLLKSLEQVRKIQASGSVLLEQLCATYKLCHPEELVLLGHSLGIPKASLSGCSSQA 104 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GL LYQGLLQAL+GISP LAPTLD LQLDV +FAT IW QME+LG AP Sbjct: 105 LQQTQCLSQLHSGLCLYQGLLQALSGISPALAPTLDLLQLDVANFATTIWQQMENLGVAP 164 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 VQPTQ AMP FTSAFQRRAGGVL S L FLE A L +LA Sbjct: 165 TVQPTQSAMPAFTSAFQRRAGGVLAISYLQGFLETARLALHHLA 208 >sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( Length = 201 Score = 215 bits (549), Expect = 6e-56 Identities = 63/164 (38%), Positives = 84/164 (50%), Gaps = 2/164 (1%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXX 63 Q FL K LE RKI+ D A LQ +C +LC EEL L++ + QAP Sbjct: 36 QLFLHKNLEFTRKIRGDVAALQRAVCDTFQLCTEEELQLVQPDPHLVQAPLDQCHKRGFQ 95 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 C Q+ GL Y L A+ + P ++TLQLD + ++NI QMEDLG Sbjct: 96 AEVCFTQIRAGLHAYHDSLGAVLRLLPNHTTLVETLQLDAANLSSNIQQQMEDLGLDTVT 155 Query: 124 QPTQ--GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 P + PTF+ FQ++ GG + + RFLE AYR LR+LA Sbjct: 156 LPAEQRSPPPTFSGPFQQQVGGFFILANFQRFLETAYRALRHLA 199 >tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor Length = 127 Score = 170 bits (431), Expect = 3e-42 Identities = 98/125 (78%), Positives = 99/125 (78%) Query: 41 MLLRHSLGIPQAPXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQ 100 MLL HSLGIPQ GCL+QLH GL LYQGLLQALAGISPELAPTLD LQ Sbjct: 1 MLLGHSLGIPQPLLSSCSSQALQLTGCLSQLHSGLLLYQGLLQALAGISPELAPTLDMLQ 60 Query: 101 LDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRG 160 LDVTDFATNIW QMEDLG AP VQPT G MPTF SAFQRRAGGVLVAS L RFLELAYRG Sbjct: 61 LDVTDFATNIWQQMEDLGVAPVVQPTHGPMPTFASAFQRRAGGVLVASNLQRFLELAYRG 120 Query: 161 LRYLA 165 LRYLA Sbjct: 121 LRYLA 125 >tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor Length = 241 Score = 51.7 bits (123), Expect = 2e-06 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 9/165 (5%) Query: 7 LLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXR 65 LL C R ++ +LQ+ +C +C ML+R++L +P+ Sbjct: 71 LLDCEPLARVLRDRAVQLQDEMCKKFTVCENSMEMLVRNNLNLPKVTEEDGCLLAGFDEE 130 Query: 66 GCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQP 125 CL +L GLF +Q L+ + +++L A I + + V P Sbjct: 131 KCLTKLSSGLFAFQTYLEFIQETFDSEKQNVESLCYSTKHLAATIRQMV--INPDEVVIP 188 Query: 126 TQGAMPTFTSAFQ------RRAGGVLVASQLHRFLELAYRGLRYL 164 A + + + + L+ F+E R +RYL Sbjct: 189 DSAAQKSLLANLKSDKDWIEKITMHLILRDFTSFMEKTVRAVRYL 233 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) 253 4e-67 tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu 247 3e-65 sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p 242 7e-64 sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre 236 3e-62 tr|:P97712 (P97712) Granulocyte colony stimulating factor 235 7e-62 sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p 226 4e-59 sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( 205 8e-53 tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor 196 5e-50 tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor 164 3e-40 Sequences not found previously or not previously below threshold: tr|:Q9XT80 (Q9XT80) Interleukin 6 81 2e-15 sp|:IL6_PIG (P26893) Interleukin-6 precursor (IL-6) 79 1e-14 sp|:IL6_HORSE (Q95181) Interleukin-6 precursor (IL-6) 78 2e-14 sp|:IL6_CANFA (P41323) Interleukin-6 precursor (IL-6) 75 2e-13 tr|:Q28403 (Q28403) Interleukin 6 (Fragment) 72 1e-12 tn|:AAM27192 (AAM27192) Interleukin-6 71 3e-12 sp|:IL6_FELCA (P41683) Interleukin-6 precursor (IL-6) 66 1e-10 tn|:AAK92044 (AAK92044) Interleukin-6 66 1e-10 scop|:d1alu__:a.26.1.1 (d1alu__:a.26.1.1) 65 2e-10 sp|:IL6_PHOVI (Q28819) Interleukin-6 precursor (IL-6) (Fragment 61 4e-09 tr|:Q9MZR1 (Q9MZR1) Interleukin 6 59 1e-08 sp|:IL6_BOVIN (P26892) Interleukin-6 precursor (IL-6) 54 3e-07 sp|:IL6_CAPHI (Q28319) Interleukin-6 precursor (IL-6) 53 7e-07 sp|:IL6_MARMO (O35736) Interleukin-6 precursor (IL-6) 52 1e-06 tr|:O97535 (O97535) Interleukin-6 (Fragment) 50 4e-06 tr|:Q9WVQ8 (Q9WVQ8) IL-6 (Fragment) 50 7e-06 sp|:IL6_MOUSE (P08505) Interleukin-6 precursor (IL-6) (Interleu 48 3e-05 tr|:Q9MZQ8 (Q9MZQ8) Interleukin 6 (Fragment)#tr|:Q9MZQ7 (Q9MZQ7)... 45 1e-04 tr|:Q9MZR0 (Q9MZR0) Interleukin 6 (Fragment) 43 0.001 sp|:IL6_MUSVI (P41693) Interleukin-6 (IL-6) (Fragment) 42 0.001 >scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) Length = 165 Score = 253 bits (646), Expect = 4e-67 Identities = 154/165 (93%), Positives = 154/165 (93%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP Sbjct: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPLSSCSSQ 60 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA Sbjct: 61 SLQLRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA Sbjct: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 >tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu Length = 195 Score = 247 bits (631), Expect = 3e-65 Identities = 128/163 (78%), Positives = 135/163 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRK+QADG LQERLCAAHKLCHPEEL+LL H+LGIPQAP Sbjct: 29 SLPQSFLLKCLEQVRKVQADGTALQERLCAAHKLCHPEELVLLGHALGIPQAPLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCL QLH GLFLYQGLLQALAGISPELAPTLD LQLD+TDFA NIW QMED+G A Sbjct: 89 ALQLTGCLRQLHSGLFLYQGLLQALAGISPELAPTLDMLQLDITDFAINIWQQMEDVGMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRY 163 PAV PTQG MPTFTSAFQRRAGG LVAS L FLE+AYR LR+ Sbjct: 149 PAVPPTQGTMPTFTSAFQRRAGGTLVASNLQSFLEVAYRALRH 191 >sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p Length = 207 Score = 242 bits (618), Expect = 7e-64 Identities = 126/168 (75%), Positives = 135/168 (80%), Gaps = 3/168 (1%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERL---CAAHKLCHPEELMLLRHSLGIPQAPXXXX 57 SLPQSFLLKCLEQVRKIQ DGA LQE+L CA +KLCHPEEL+LL HSLGIP AP Sbjct: 38 SLPQSFLLKCLEQVRKIQGDGAALQEKLVSECATYKLCHPEELVLLGHSLGIPWAPLSSC 97 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 GCL+QLH GLFLYQGLLQAL GISPEL PTLDTLQLDV DFAT IW QME+L Sbjct: 98 PSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEEL 157 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 G APA+QPTQGAMP F SAFQRRAGGVLVAS L FLE++YR LR+LA Sbjct: 158 GMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLA 205 >sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre Length = 195 Score = 236 bits (604), Expect = 3e-62 Identities = 133/165 (80%), Positives = 137/165 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCA HKLCHP+EL+LL HSLG+PQA Sbjct: 29 SLPQSFLLKCLEQVRKIQADGAELQERLCATHKLCHPQELVLLGHSLGLPQASLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCLNQLHGGL LYQGLLQALAGISPELAP LD LQLDVTD ATNIWLQMEDL A Sbjct: 89 ALQLTGCLNQLHGGLVLYQGLLQALAGISPELAPALDILQLDVTDLATNIWLQMEDLRMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PA PTQG +PTFTSAFQRRAGGVLV SQL FLELAYR LRYLA Sbjct: 149 PASLPTQGTVPTFTSAFQRRAGGVLVVSQLQSFLELAYRVLRYLA 193 >tr|:P97712 (P97712) Granulocyte colony stimulating factor Length = 214 Score = 235 bits (601), Expect = 7e-62 Identities = 111/163 (68%), Positives = 120/163 (73%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA EL E+LCA +KLCHPEEL+L HSLGIP+A Sbjct: 36 LPRSFLLKSLEQVRKIQARNTELLEQLCATYKLCHPEELVLFGHSLGIPKASLSSCSSQA 95 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GLFLYQGLLQALAGIS ELAPTLD L LDV +FAT IW QME LG AP Sbjct: 96 LQQTKCLSQLHSGLFLYQGLLQALAGISSELAPTLDMLHLDVDNFATTIWQQMESLGVAP 155 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYL 164 VQPTQ MP FTSAFQRRAGGVLV S L FLE A+ L +L Sbjct: 156 TVQPTQSTMPIFTSAFQRRAGGVLVTSYLQSFLETAHHALHHL 198 >sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p Length = 208 Score = 226 bits (578), Expect = 4e-59 Identities = 112/164 (68%), Positives = 123/164 (74%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA G+ L E+LCA +KLCHPEEL+LL HSLGIP+A Sbjct: 45 LPRSFLLKSLEQVRKIQASGSVLLEQLCATYKLCHPEELVLLGHSLGIPKASLSGCSSQA 104 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GL LYQGLLQAL+GISP LAPTLD LQLDV +FAT IW QME+LG AP Sbjct: 105 LQQTQCLSQLHSGLCLYQGLLQALSGISPALAPTLDLLQLDVANFATTIWQQMENLGVAP 164 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 VQPTQ AMP FTSAFQRRAGGVL S L FLE A L +LA Sbjct: 165 TVQPTQSAMPAFTSAFQRRAGGVLAISYLQGFLETARLALHHLA 208 >sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( Length = 201 Score = 205 bits (523), Expect = 8e-53 Identities = 63/164 (38%), Positives = 84/164 (50%), Gaps = 2/164 (1%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXX 63 Q FL K LE RKI+ D A LQ +C +LC EEL L++ + QAP Sbjct: 36 QLFLHKNLEFTRKIRGDVAALQRAVCDTFQLCTEEELQLVQPDPHLVQAPLDQCHKRGFQ 95 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 C Q+ GL Y L A+ + P ++TLQLD + ++NI QMEDLG Sbjct: 96 AEVCFTQIRAGLHAYHDSLGAVLRLLPNHTTLVETLQLDAANLSSNIQQQMEDLGLDTVT 155 Query: 124 QPTQ--GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 P + PTF+ FQ++ GG + + RFLE AYR LR+LA Sbjct: 156 LPAEQRSPPPTFSGPFQQQVGGFFILANFQRFLETAYRALRHLA 199 >tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor Length = 241 Score = 196 bits (499), Expect = 5e-50 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 9/165 (5%) Query: 7 LLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXR 65 LL C R ++ +LQ+ +C +C ML+R++L +P+ Sbjct: 71 LLDCEPLARVLRDRAVQLQDEMCKKFTVCENSMEMLVRNNLNLPKVTEEDGCLLAGFDEE 130 Query: 66 GCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQP 125 CL +L GLF +Q L+ + +++L A I + + V P Sbjct: 131 KCLTKLSSGLFAFQTYLEFIQETFDSEKQNVESLCYSTKHLAATIRQMV--INPDEVVIP 188 Query: 126 TQGAMPTFTSAFQ------RRAGGVLVASQLHRFLELAYRGLRYL 164 A + + + + L+ F+E R +RYL Sbjct: 189 DSAAQKSLLANLKSDKDWIEKITMHLILRDFTSFMEKTVRAVRYL 233 >tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor Length = 127 Score = 164 bits (415), Expect = 3e-40 Identities = 98/125 (78%), Positives = 99/125 (78%) Query: 41 MLLRHSLGIPQAPXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQ 100 MLL HSLGIPQ GCL+QLH GL LYQGLLQALAGISPELAPTLD LQ Sbjct: 1 MLLGHSLGIPQPLLSSCSSQALQLTGCLSQLHSGLLLYQGLLQALAGISPELAPTLDMLQ 60 Query: 101 LDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRG 160 LDVTDFATNIW QMEDLG AP VQPT G MPTF SAFQRRAGGVLVAS L RFLELAYRG Sbjct: 61 LDVTDFATNIWQQMEDLGVAPVVQPTHGPMPTFASAFQRRAGGVLVASNLQRFLELAYRG 120 Query: 161 LRYLA 165 LRYLA Sbjct: 121 LRYLA 125 >tr|:Q9XT80 (Q9XT80) Interleukin 6 Length = 208 Score = 81.3 bits (200), Expect = 2e-15 Identities = 27/162 (16%), Positives = 59/162 (35%), Gaps = 10/162 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 K ++ I + +++ +C + C + L ++L +P+ A C Sbjct: 47 KTEALIKYILGKISAMRKEMCEKYDKCENSKEALAENNLNLPKMAEKDGCFQSGFNQETC 106 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L ++ GL YQ L L +++ +Q+ + A + +++ P Sbjct: 107 LMRITTGLLEYQIYLDYLQNEYEGDKGSIEAVQISIKALAQILRQKVK--NPDEVTTPDP 164 Query: 128 GAMPTFTSAFQ-------RRAGGVLVASQLHRFLELAYRGLR 162 + + Q R +L+ L FL+ + R +R Sbjct: 165 TTNASLMNNLQSQNDDWMRNTKIILILRSLENFLQFSLRAVR 206 >sp|:IL6_PIG (P26893) Interleukin-6 precursor (IL-6) Length = 212 Score = 79.0 bits (194), Expect = 1e-14 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 9/161 (5%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 K E ++ I + +++ +C ++ C + +L ++L +P+ A C Sbjct: 52 KTEELIKYILGKISAMRKEMCEKYEKCENSKEVLAENNLNLPKMAEKDGCFQSGFNQETC 111 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L ++ GL +Q L L ++ +Q+ + + + A P Sbjct: 112 LMRITTGLVEFQIYLDYLQKEYESNKGNVEAVQISTKALIQTLRQKGK--NPDKATTPNP 169 Query: 128 GAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 Q + +L+ L FL+ + R +R Sbjct: 170 TTNAGLLDKLQSQNEWMKNTKIILILRSLEDFLQFSLRAIR 210 >sp|:IL6_HORSE (Q95181) Interleukin-6 precursor (IL-6) Length = 208 Score = 77.8 bits (191), Expect = 2e-14 Identities = 27/161 (16%), Positives = 57/161 (34%), Gaps = 10/161 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 K + ++ I + L+ +C C + +L ++L +P+ A C Sbjct: 49 KTKQHIKYILGKISALKNEMCNNFSKCENSKEVLAENNLNLPKMAEKDGCFQSGFNQETC 108 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L ++ GL +Q L+ L + T+Q+ + +M++ P Sbjct: 109 LMKITTGLSEFQIYLEYLQNEFKGEKENIKTMQISTKVLVQILMQKMKN---PEVTTPDP 165 Query: 128 GAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 A + + + L+ L FL+ + R +R Sbjct: 166 TAKSSLLAKLHSQNEWLKNTTTHLILRSLEDFLQFSLRAVR 206 >sp|:IL6_CANFA (P41323) Interleukin-6 precursor (IL-6) Length = 207 Score = 75.2 bits (184), Expect = 2e-13 Identities = 27/169 (15%), Positives = 57/169 (32%), Gaps = 9/169 (5%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXX 59 SLP + K E ++ I + L++ +C C + L ++L +P+ Sbjct: 39 SLPLTSANKVEELIKYILGKISALRKEMCDKFNKCEDSKEALAENNLHLPKLEGKDGCFQ 98 Query: 60 XXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGA 119 CL ++ GL +Q L L + ++ + + +++ Sbjct: 99 SGFNQETCLTRITTGLVEFQLHLNILQNNYEGDKENVKSVHMSTKILVQMLKSKVK--NQ 156 Query: 120 APAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 P + + Q + L+ L FL+ + R +R Sbjct: 157 DEVTTPDPTTDASLQAILQSQDECVKHTTIHLILRSLEDFLQFSLRAVR 205 >tr|:Q28403 (Q28403) Interleukin 6 (Fragment) Length = 207 Score = 72.5 bits (177), Expect = 1e-12 Identities = 24/161 (14%), Positives = 54/161 (32%), Gaps = 11/161 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 K + ++ I + L+ +C + C + +L ++L +P+ A C Sbjct: 49 KMEDFIKFILGKISALRNEMCDKYNKCEDSKEVLAENNLNLPKLAEKDRCFQSRFNQETC 108 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L ++ GL +Q L+ L ++ + + P Sbjct: 109 LTRITTGLQEFQIHLKYLESNYEGNKDNAHSVYISTKHLLQTLRPM----NQIEVTTPDP 164 Query: 128 GAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 + + F+ + L+ +L FL+ + R +R Sbjct: 165 TTDASLQALFKSQDKWLKHTTIHLILRRLEDFLQFSLRAIR 205 >tn|:AAM27192 (AAM27192) Interleukin-6 Length = 214 Score = 70.9 bits (173), Expect = 3e-12 Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 3/133 (2%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 K E ++ I + +++ +C ++ C + +L ++L +P+ A C Sbjct: 52 KTEELIKYILGKISAMRKEMCEKYEKCENSKEVLAENNLNLPKMAEKDGCFQSGFNQETC 111 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L ++ GL +Q L L ++ +Q+ + + + A P Sbjct: 112 LMRITTGLVEFQIYLDYLQKEYESNKGNVEAVQISTKALIQTLRQKGK--NPDKATTPNP 169 Query: 128 GAMPTFTSAFQRR 140 Q + Sbjct: 170 TTNAGLLDKLQSQ 182 >sp|:IL6_FELCA (P41683) Interleukin-6 precursor (IL-6) Length = 208 Score = 65.9 bits (160), Expect = 1e-10 Identities = 33/171 (19%), Positives = 60/171 (34%), Gaps = 15/171 (8%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXX 60 LP + K E ++ I + L++ +C + C + L ++L +P+ A Sbjct: 41 LPLTSADKMEELIKYILGKISALKKEMCDNYNKCEDSKEALAENNLNLPKLAEKDGCFQS 100 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQM---EDL 117 CL ++ GL +Q L+ L ++ +TN+ LQM + Sbjct: 101 GFNQETCLTRITTGLQEFQIYLKFLQDKYEGDEENAKSV-----YTSTNVLLQMLKRKGK 155 Query: 118 GAAPAVQPTQGAMPTFTSAFQ------RRAGGVLVASQLHRFLELAYRGLR 162 P + Q R L +L FL+ + R +R Sbjct: 156 NQDEVTIPVPTVEVGLQAKLQSQEEWLRHTTIHLTLRRLEDFLQFSLRAVR 206 >tn|:AAK92044 (AAK92044) Interleukin-6 Length = 212 Score = 65.5 bits (159), Expect = 1e-10 Identities = 30/173 (17%), Positives = 61/173 (34%), Gaps = 13/173 (7%) Query: 3 PQSFLLKCLEQVRK----IQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXX 57 P LL E++ K I + L++ +C +C + L ++L +P+ A Sbjct: 42 PNRQLLTSTERIDKHIWYILDGISALRKEICNKSNMCESSKEALAENNLNLPKMAEKDGC 101 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 CL ++ GL ++ L+ L +Q+ ++ + ++L Sbjct: 102 FQSGFNEETCLLKITTGLLEFEVYLEYLQNRFESSKEQAGAVQMSTKGLIQSLQRKAKNL 161 Query: 118 GAAPAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 A P + + Q + L+ FL+ + R LR + Sbjct: 162 SA--IATPDPATNASLLTKLQAQDQWLQGVTTHLILRSFKEFLQCSLRALRQM 212 >scop|:d1alu__:a.26.1.1 (d1alu__:a.26.1.1) Length = 166 Score = 65.1 bits (158), Expect = 2e-10 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGCLNQL 71 Q+R I + L++ C +C + L ++L +P+ A CL ++ Sbjct: 10 QIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKI 69 Query: 72 HGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAMP 131 GL ++ L+ L +Q+ + + ++L P Sbjct: 70 ITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNL--DAITTPDPTTNA 127 Query: 132 TFTSAFQ------RRAGGVLVASQLHRFLELAYRGLRYL 164 + + Q + L+ FL+ + R LR + Sbjct: 128 SLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM 166 >sp|:IL6_PHOVI (Q28819) Interleukin-6 precursor (IL-6) (Fragment Length = 209 Score = 60.5 bits (146), Expect = 4e-09 Identities = 23/161 (14%), Positives = 56/161 (34%), Gaps = 9/161 (5%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 K E ++ I + L++ +C + C + L ++L +P+ A C Sbjct: 49 KMEEFIKYILGKISALRKEMCDKYNKCEDSKEALAENNLRLPKLAEKDGCFQSGFNQETC 108 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L ++ GL +Q L+ + +++ + + +++ P Sbjct: 109 LTRITTGLLEFQIHLKYIQANYEGNKEDANSVYISTKLLVQMLMKKVKS--QDEVTTPDP 166 Query: 128 GAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 + + + + L+ L FL+ + R +R Sbjct: 167 TTDTSLQAILKAQDKWLKHTTIHLILRSLEDFLQFSLRAVR 207 >tr|:Q9MZR1 (Q9MZR1) Interleukin 6 Length = 241 Score = 59.0 bits (142), Expect = 1e-08 Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 11/159 (6%) Query: 12 EQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGCLNQ 70 E +R I EL++ +C C + L +L +P+ CL + Sbjct: 55 ESIRSILETIKELRKEMCDHDVNCMNRKEALAEVNLHLPRLIEEDGCFPPAVNNETCLLR 114 Query: 71 LHGGLFLYQGLLQALAGI--SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQG 128 + GL ++ L+ L S E + + ++ + ++++L ++P Sbjct: 115 ITSGLMEFRMYLEHLQAKFRSDEENTRVSMVLKNIQHLIKTLRPKVKNLNEEATLKPAVA 174 Query: 129 AMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGL 161 + Q++ + L FLE R + Sbjct: 175 V--SLMENLQQKNQWLKTTTIHFILRGLTNFLEFTLRAV 211 >sp|:IL6_BOVIN (P26892) Interleukin-6 precursor (IL-6) Length = 208 Score = 54.4 bits (130), Expect = 3e-07 Identities = 26/155 (16%), Positives = 58/155 (36%), Gaps = 1/155 (0%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXXXRG-C 67 K ++++ + +++ +C + C + L + L +P+ + C Sbjct: 52 KTEALIKRMVDKISAMRKEICEKNDECESSKETLAENKLNLPKMEEKDGCFQSGFNQAIC 111 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L + GL YQ L L + L+ ++ + ++ DL PA Sbjct: 112 LIRTTAGLLEYQIYLDYLQNEYEGNQENVRDLRKNIRTLIQILKQKIADLITTPATNTDL 171 Query: 128 GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLR 162 ++ + + A +L+ L FL+ + R +R Sbjct: 172 LEKMQSSNEWVKNAKIILILRNLENFLQFSLRAIR 206 >sp|:IL6_CAPHI (Q28319) Interleukin-6 precursor (IL-6) Length = 208 Score = 53.2 bits (127), Expect = 7e-07 Identities = 27/155 (17%), Positives = 56/155 (35%), Gaps = 1/155 (0%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXXXRG-C 67 K ++ I + +++ +C + C + L + L +P+ + C Sbjct: 52 KTEALIKHIVDKISAIRKEICEKNDECENSKETLAENKLKLPKMEEKDGCFQSGFNQAIC 111 Query: 68 LNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQ 127 L + GL YQ L L T+ LQ + + ++ L PA Sbjct: 112 LIKTTAGLLEYQIYLDFLQNEFEGNQETVMELQSSIRTLIQILKEKIAGLITTPATNTDM 171 Query: 128 GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLR 162 ++ + + A +++ L FL+ + R +R Sbjct: 172 LEKMQSSNEWVKNAKVIIILRSLENFLQFSLRAIR 206 >sp|:IL6_MARMO (O35736) Interleukin-6 precursor (IL-6) Length = 207 Score = 52.4 bits (125), Expect = 1e-06 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 11/149 (7%) Query: 23 ELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXXXR-GCLNQLHGGLFLYQGL 81 E+++ LC + C + + ++L +P+ R CL ++ GL +Q Sbjct: 59 EMRKELCKNDETCIKSHVAVSENNLNLPKMTEKDGCFQTGYNRDDCLVRITSGLLEFQVY 118 Query: 82 LQALAGISPE--LAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAF-- 137 L+ + E + +Q + +++D V P+ A + Sbjct: 119 LRYIRNKFQEGNNRDRAEHVQSSSKALIEILKQEVKD--PNKIVFPSPTANINLLAKLES 176 Query: 138 ----QRRAGGVLVASQLHRFLELAYRGLR 162 Q+ L+ S FL+ R +R Sbjct: 177 QNDWQKVMTMQLILSNFEDFLQFTLRAVR 205 >tr|:O97535 (O97535) Interleukin-6 (Fragment) Length = 160 Score = 50.5 bits (120), Expect = 4e-06 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%) Query: 3 PQSFLLKCLEQ----VRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXX 57 P LL EQ +R I A L++ +C +C + L ++L +P+ A Sbjct: 42 PNRQLLTSTEQIDKHIRYILEGIAALRKEICDKSNMCESSKEALAENNLNLPKMAEKDGC 101 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFAT 108 CL ++ GL ++ L+ L +Q+ +++ Sbjct: 102 FQSGFNEETCLLKITTGLLEFEVYLEYLQNRFESSKEQAGAVQMSTKAWSS 152 >tr|:Q9WVQ8 (Q9WVQ8) IL-6 (Fragment) Length = 210 Score = 49.7 bits (118), Expect = 7e-06 Identities = 28/148 (18%), Positives = 52/148 (34%), Gaps = 10/148 (6%) Query: 23 ELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQLHGGLFLYQGL 81 EL++ LC + C + +LL ++L +P CL ++ GL YQ Sbjct: 63 ELRKELCNNNPGCMDNDYVLLENNLELPVIQINDGCLQTGYNWEICLLKITSGLLDYQIY 122 Query: 82 LQALA-GISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQ-- 138 L+ + + +Q + + +++ G V P+ + + Sbjct: 123 LEFVTNNVQDNKKDKARVIQSTIKTLSQIFKQEVK--GPDKIVTPSPTSKAILMEKLESQ 180 Query: 139 ----RRAGGVLVASQLHRFLELAYRGLR 162 R L+ L FLE+ R R Sbjct: 181 KEWPRTKTIKLILKALEEFLEVTMRSTR 208 >sp|:IL6_MOUSE (P08505) Interleukin-6 precursor (IL-6) (Interleu Length = 211 Score = 47.8 bits (113), Expect = 3e-05 Identities = 28/149 (18%), Positives = 50/149 (32%), Gaps = 10/149 (6%) Query: 22 AELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQLHGGLFLYQG 80 E+++ LC + C + L ++L +P+ CL ++ GL Y Sbjct: 63 VEMRKELCNGNSDCMNNDDALAENNLKLPEIQRNDGCYQTGYNQEICLLKISSGLLEYHS 122 Query: 81 LLQALA-GISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQ- 138 L+ + + LQ D +++DL V PT + T + Sbjct: 123 YLEYMKNNLKDNKKDKARVLQRDTETLIHIFNQEVKDLH--KIVLPTPISNALLTDKLES 180 Query: 139 -----RRAGGVLVASQLHRFLELAYRGLR 162 R + L FL++ R R Sbjct: 181 QKEWLRTKTIQFILKSLEEFLKVTLRSTR 209 >tr|:Q9MZQ8 (Q9MZQ8) Interleukin 6 (Fragment)#tr|:Q9MZQ7 (Q9MZQ7) Interleukin 6 (Fragment) Length = 118 Score = 45.5 bits (107), Expect = 1e-04 Identities = 17/105 (16%), Positives = 39/105 (36%), Gaps = 10/105 (9%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGI--SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L S E + + ++ + ++++L Sbjct: 13 ETCLLRITSGLLEFQMYLEHLQAKFRSDEENTRVSMMLKNIRYLIKTLRPKVKNLNEGAT 72 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGL 161 ++P A + Q++ + L FL+ + R + Sbjct: 73 LKPAIVA--SLMKNLQQKDQWLKTTTIHFILRNLTDFLQFSLRAV 115 >tr|:Q9MZR0 (Q9MZR0) Interleukin 6 (Fragment) Length = 118 Score = 42.8 bits (100), Expect = 0.001 Identities = 16/106 (15%), Positives = 38/106 (35%), Gaps = 10/106 (9%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGI--SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L S E + + ++ + ++++ Sbjct: 13 ETCLLRITSGLLEFQMYLEHLQAKFRSEEENTRVSMILKNMRHLINTLRPKVKNFNEGAT 72 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 ++P + + Q++ + L FL+ R +R Sbjct: 73 LKP--AVVASLMENLQQKDQWLKTTTIHFILRGLTDFLQFTLRSVR 116 >sp|:IL6_MUSVI (P41693) Interleukin-6 (IL-6) (Fragment) Length = 125 Score = 42.4 bits (99), Expect = 0.001 Identities = 17/125 (13%), Positives = 40/125 (31%), Gaps = 11/125 (8%) Query: 45 HSLGIPQ-APXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDV 103 ++L +P+ A C+ ++ GL +Q L+ L ++ + Sbjct: 3 NNLKLPKLAEKDKCFQSQFNQETCMTRITTGLQEFQIHLKYLEANYEGNKNNAHSVYIST 62 Query: 104 TDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELA 157 ++ + P + + F+ + L+ L FL+ + Sbjct: 63 KHLL----QKLRPMNQVEVTTPNPTTDSSLQALFKSQDKWLKHVTIHLILRSLEDFLQFS 118 Query: 158 YRGLR 162 R +R Sbjct: 119 LRAIR 123 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: tr|:Q9XT80 (Q9XT80) Interleukin 6 214 2e-55 sp|:IL6_CANFA (P41323) Interleukin-6 precursor (IL-6) 213 4e-55 sp|:IL6_PIG (P26893) Interleukin-6 precursor (IL-6) 209 6e-54 scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) 209 7e-54 tr|:Q28403 (Q28403) Interleukin 6 (Fragment) 209 7e-54 sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p 207 2e-53 tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu 207 2e-53 sp|:IL6_FELCA (P41683) Interleukin-6 precursor (IL-6) 201 2e-51 sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre 199 6e-51 sp|:IL6_HORSE (Q95181) Interleukin-6 precursor (IL-6) 195 1e-49 sp|:IL6_PHOVI (Q28819) Interleukin-6 precursor (IL-6) (Fragment 194 3e-49 tr|:P97712 (P97712) Granulocyte colony stimulating factor 192 5e-49 sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p 190 2e-48 tn|:AAK92044 (AAK92044) Interleukin-6 189 7e-48 tn|:AAM27192 (AAM27192) Interleukin-6 184 2e-46 sp|:IL6_BOVIN (P26892) Interleukin-6 precursor (IL-6) 183 4e-46 scop|:d1alu__:a.26.1.1 (d1alu__:a.26.1.1) 179 7e-45 sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( 177 2e-44 sp|:IL6_CAPHI (Q28319) Interleukin-6 precursor (IL-6) 177 3e-44 tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor 174 2e-43 tr|:Q9MZR1 (Q9MZR1) Interleukin 6 166 5e-41 sp|:IL6_MARMO (O35736) Interleukin-6 precursor (IL-6) 159 8e-39 tr|:Q9WVQ8 (Q9WVQ8) IL-6 (Fragment) 153 4e-37 sp|:IL6_MOUSE (P08505) Interleukin-6 precursor (IL-6) (Interleu 150 2e-36 tr|:O97535 (O97535) Interleukin-6 (Fragment) 135 1e-31 sp|:IL6_MUSVI (P41693) Interleukin-6 (IL-6) (Fragment) 134 2e-31 tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor 129 7e-30 tr|:Q9MZR0 (Q9MZR0) Interleukin 6 (Fragment) 113 3e-25 tr|:Q9MZQ8 (Q9MZQ8) Interleukin 6 (Fragment)#tr|:Q9MZQ7 (Q9MZQ7)... 113 6e-25 Sequences not found previously or not previously below threshold: sp|:IL6_RAT (P20607) Interleukin-6 precursor (IL-6) 138 1e-32 tr|:Q91ZL3 (Q91ZL3) Interleukin 6 135 1e-31 tr|:Q8SPS3 (Q8SPS3) Interleukin-6 (Fragment) 69 1e-11 >tr|:Q9XT80 (Q9XT80) Interleukin 6 Length = 208 Score = 214 bits (545), Expect = 2e-55 Identities = 28/169 (16%), Positives = 61/169 (35%), Gaps = 10/169 (5%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXX 60 L + K ++ I + +++ +C + C + L ++L +P+ A Sbjct: 40 LLLTSPDKTEALIKYILGKISAMRKEMCEKYDKCENSKEALAENNLNLPKMAEKDGCFQS 99 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 CL ++ GL YQ L L +++ +Q+ + A + +++ Sbjct: 100 GFNQETCLMRITTGLLEYQIYLDYLQNEYEGDKGSIEAVQISIKALAQILRQKVK--NPD 157 Query: 121 PAVQPTQGAMPTFTSAFQ-------RRAGGVLVASQLHRFLELAYRGLR 162 P + + Q R +L+ L FL+ + R +R Sbjct: 158 EVTTPDPTTNASLMNNLQSQNDDWMRNTKIILILRSLENFLQFSLRAVR 206 >sp|:IL6_CANFA (P41323) Interleukin-6 precursor (IL-6) Length = 207 Score = 213 bits (543), Expect = 4e-55 Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 9/171 (5%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXX 59 SLP + K E ++ I + L++ +C C + L ++L +P+ Sbjct: 39 SLPLTSANKVEELIKYILGKISALRKEMCDKFNKCEDSKEALAENNLHLPKLEGKDGCFQ 98 Query: 60 XXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGA 119 CL ++ GL +Q L L + ++ + + +++ Sbjct: 99 SGFNQETCLTRITTGLVEFQLHLNILQNNYEGDKENVKSVHMSTKILVQMLKSKVK--NQ 156 Query: 120 APAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + Q + L+ L FL+ + R +R + Sbjct: 157 DEVTTPDPTTDASLQAILQSQDECVKHTTIHLILRSLEDFLQFSLRAVRIM 207 >sp|:IL6_PIG (P26893) Interleukin-6 precursor (IL-6) Length = 212 Score = 209 bits (533), Expect = 6e-54 Identities = 26/167 (15%), Positives = 59/167 (34%), Gaps = 9/167 (5%) Query: 5 SFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXX 63 + K E ++ I + +++ +C ++ C + +L ++L +P+ A Sbjct: 48 TSPDKTEELIKYILGKISAMRKEMCEKYEKCENSKEVLAENNLNLPKMAEKDGCFQSGFN 107 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 CL ++ GL +Q L L ++ +Q+ + + + A Sbjct: 108 QETCLMRITTGLVEFQIYLDYLQKEYESNKGNVEAVQISTKALIQTLRQKGK--NPDKAT 165 Query: 124 QPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P Q + +L+ L FL+ + R +R + Sbjct: 166 TPNPTTNAGLLDKLQSQNEWMKNTKIILILRSLEDFLQFSLRAIRIM 212 >scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) Length = 165 Score = 209 bits (532), Expect = 7e-54 Identities = 154/165 (93%), Positives = 154/165 (93%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP Sbjct: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPLSSCSSQ 60 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA Sbjct: 61 SLQLRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA Sbjct: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 >tr|:Q28403 (Q28403) Interleukin 6 (Fragment) Length = 207 Score = 209 bits (532), Expect = 7e-54 Identities = 25/169 (14%), Positives = 58/169 (33%), Gaps = 11/169 (6%) Query: 3 PQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXX 61 P + K + ++ I + L+ +C + C + +L ++L +P+ A Sbjct: 43 PLTSADKMEDFIKFILGKISALRNEMCDKYNKCEDSKEVLAENNLNLPKLAEKDRCFQSR 102 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL ++ GL +Q L+ L ++ + + + Sbjct: 103 FNQETCLTRITTGLQEFQIHLKYLESNYEGNKDNAHSVYISTKHLLQTLRP----MNQIE 158 Query: 122 AVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + F+ + L+ +L FL+ + R +R + Sbjct: 159 VTTPDPTTDASLQALFKSQDKWLKHTTIHLILRRLEDFLQFSLRAIRIM 207 >sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p Length = 207 Score = 207 bits (529), Expect = 2e-53 Identities = 126/168 (75%), Positives = 135/168 (80%), Gaps = 3/168 (1%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERL---CAAHKLCHPEELMLLRHSLGIPQAPXXXX 57 SLPQSFLLKCLEQVRKIQ DGA LQE+L CA +KLCHPEEL+LL HSLGIP AP Sbjct: 38 SLPQSFLLKCLEQVRKIQGDGAALQEKLVSECATYKLCHPEELVLLGHSLGIPWAPLSSC 97 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 GCL+QLH GLFLYQGLLQAL GISPEL PTLDTLQLDV DFAT IW QME+L Sbjct: 98 PSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEEL 157 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 G APA+QPTQGAMP F SAFQRRAGGVLVAS L FLE++YR LR+LA Sbjct: 158 GMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLA 205 >tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu Length = 195 Score = 207 bits (528), Expect = 2e-53 Identities = 128/163 (78%), Positives = 135/163 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRK+QADG LQERLCAAHKLCHPEEL+LL H+LGIPQAP Sbjct: 29 SLPQSFLLKCLEQVRKVQADGTALQERLCAAHKLCHPEELVLLGHALGIPQAPLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCL QLH GLFLYQGLLQALAGISPELAPTLD LQLD+TDFA NIW QMED+G A Sbjct: 89 ALQLTGCLRQLHSGLFLYQGLLQALAGISPELAPTLDMLQLDITDFAINIWQQMEDVGMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRY 163 PAV PTQG MPTFTSAFQRRAGG LVAS L FLE+AYR LR+ Sbjct: 149 PAVPPTQGTMPTFTSAFQRRAGGTLVASNLQSFLEVAYRALRH 191 >sp|:IL6_FELCA (P41683) Interleukin-6 precursor (IL-6) Length = 208 Score = 201 bits (512), Expect = 2e-51 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 9/170 (5%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXX 60 LP + K E ++ I + L++ +C + C + L ++L +P+ A Sbjct: 41 LPLTSADKMEELIKYILGKISALKKEMCDNYNKCEDSKEALAENNLNLPKLAEKDGCFQS 100 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 CL ++ GL +Q L+ L ++ + + + Sbjct: 101 GFNQETCLTRITTGLQEFQIYLKFLQDKYEGDEENAKSVYTSTNVLLQMLKRKGK--NQD 158 Query: 121 PAVQPTQGAMPTFTSAFQ------RRAGGVLVASQLHRFLELAYRGLRYL 164 P + Q R L +L FL+ + R +R + Sbjct: 159 EVTIPVPTVEVGLQAKLQSQEEWLRHTTIHLTLRRLEDFLQFSLRAVRIM 208 >sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre Length = 195 Score = 199 bits (507), Expect = 6e-51 Identities = 133/165 (80%), Positives = 137/165 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCA HKLCHP+EL+LL HSLG+PQA Sbjct: 29 SLPQSFLLKCLEQVRKIQADGAELQERLCATHKLCHPQELVLLGHSLGLPQASLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCLNQLHGGL LYQGLLQALAGISPELAP LD LQLDVTD ATNIWLQMEDL A Sbjct: 89 ALQLTGCLNQLHGGLVLYQGLLQALAGISPELAPALDILQLDVTDLATNIWLQMEDLRMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PA PTQG +PTFTSAFQRRAGGVLV SQL FLELAYR LRYLA Sbjct: 149 PASLPTQGTVPTFTSAFQRRAGGVLVVSQLQSFLELAYRVLRYLA 193 >sp|:IL6_HORSE (Q95181) Interleukin-6 precursor (IL-6) Length = 208 Score = 195 bits (496), Expect = 1e-49 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 10/168 (5%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXX 62 + K + ++ I + L+ +C C + +L ++L +P+ A Sbjct: 44 LTTADKTKQHIKYILGKISALKNEMCNNFSKCENSKEVLAENNLNLPKMAEKDGCFQSGF 103 Query: 63 XXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L + T+Q+ + +M++ Sbjct: 104 NQETCLMKITTGLSEFQIYLEYLQNEFKGEKENIKTMQISTKVLVQILMQKMKN---PEV 160 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P A + + + L+ L FL+ + R +R + Sbjct: 161 TTPDPTAKSSLLAKLHSQNEWLKNTTTHLILRSLEDFLQFSLRAVRIM 208 >sp|:IL6_PHOVI (Q28819) Interleukin-6 precursor (IL-6) (Fragment Length = 209 Score = 194 bits (493), Expect = 3e-49 Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 9/169 (5%) Query: 3 PQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXX 61 P + K E ++ I + L++ +C + C + L ++L +P+ A Sbjct: 43 PLTSPDKMEEFIKYILGKISALRKEMCDKYNKCEDSKEALAENNLRLPKLAEKDGCFQSG 102 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL ++ GL +Q L+ + +++ + + +++ Sbjct: 103 FNQETCLTRITTGLLEFQIHLKYIQANYEGNKEDANSVYISTKLLVQMLMKKVKS--QDE 160 Query: 122 AVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + + + L+ L FL+ + R +R + Sbjct: 161 VTTPDPTTDTSLQAILKAQDKWLKHTTIHLILRSLEDFLQFSLRAVRIM 209 >tr|:P97712 (P97712) Granulocyte colony stimulating factor Length = 214 Score = 192 bits (490), Expect = 5e-49 Identities = 111/163 (68%), Positives = 120/163 (73%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA EL E+LCA +KLCHPEEL+L HSLGIP+A Sbjct: 36 LPRSFLLKSLEQVRKIQARNTELLEQLCATYKLCHPEELVLFGHSLGIPKASLSSCSSQA 95 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GLFLYQGLLQALAGIS ELAPTLD L LDV +FAT IW QME LG AP Sbjct: 96 LQQTKCLSQLHSGLFLYQGLLQALAGISSELAPTLDMLHLDVDNFATTIWQQMESLGVAP 155 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYL 164 VQPTQ MP FTSAFQRRAGGVLV S L FLE A+ L +L Sbjct: 156 TVQPTQSTMPIFTSAFQRRAGGVLVTSYLQSFLETAHHALHHL 198 >sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p Length = 208 Score = 190 bits (485), Expect = 2e-48 Identities = 112/164 (68%), Positives = 123/164 (74%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA G+ L E+LCA +KLCHPEEL+LL HSLGIP+A Sbjct: 45 LPRSFLLKSLEQVRKIQASGSVLLEQLCATYKLCHPEELVLLGHSLGIPKASLSGCSSQA 104 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GL LYQGLLQAL+GISP LAPTLD LQLDV +FAT IW QME+LG AP Sbjct: 105 LQQTQCLSQLHSGLCLYQGLLQALSGISPALAPTLDLLQLDVANFATTIWQQMENLGVAP 164 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 VQPTQ AMP FTSAFQRRAGGVL S L FLE A L +LA Sbjct: 165 TVQPTQSAMPAFTSAFQRRAGGVLAISYLQGFLETARLALHHLA 208 >tn|:AAK92044 (AAK92044) Interleukin-6 Length = 212 Score = 189 bits (480), Expect = 7e-48 Identities = 28/173 (16%), Positives = 59/173 (33%), Gaps = 13/173 (7%) Query: 3 PQSFLLKCLEQVR----KIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXX 57 P LL E++ I + L++ +C +C + L ++L +P+ A Sbjct: 42 PNRQLLTSTERIDKHIWYILDGISALRKEICNKSNMCESSKEALAENNLNLPKMAEKDGC 101 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 CL ++ GL ++ L+ L +Q+ ++ + ++L Sbjct: 102 FQSGFNEETCLLKITTGLLEFEVYLEYLQNRFESSKEQAGAVQMSTKGLIQSLQRKAKNL 161 Query: 118 GAAPAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + Q + L+ FL+ + R LR + Sbjct: 162 S--AIATPDPATNASLLTKLQAQDQWLQGVTTHLILRSFKEFLQCSLRALRQM 212 >tn|:AAM27192 (AAM27192) Interleukin-6 Length = 214 Score = 184 bits (468), Expect = 2e-46 Identities = 20/137 (14%), Positives = 47/137 (33%), Gaps = 3/137 (2%) Query: 5 SFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXX 63 + K E ++ I + +++ +C ++ C + +L ++L +P+ A Sbjct: 48 TSPDKTEELIKYILGKISAMRKEMCEKYEKCENSKEVLAENNLNLPKMAEKDGCFQSGFN 107 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 CL ++ GL +Q L L ++ +Q+ + + + A Sbjct: 108 QETCLMRITTGLVEFQIYLDYLQKEYESNKGNVEAVQISTKALIQTLRQKGK--NPDKAT 165 Query: 124 QPTQGAMPTFTSAFQRR 140 P Q + Sbjct: 166 TPNPTTNAGLLDKLQSQ 182 >sp|:IL6_BOVIN (P26892) Interleukin-6 precursor (IL-6) Length = 208 Score = 183 bits (465), Expect = 4e-46 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 5/165 (3%) Query: 3 PQSFLL----KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXX 58 P LL K ++++ + +++ +C + C + L + L +P+ Sbjct: 42 PGRLLLTTPEKTEALIKRMVDKISAMRKEICEKNDECESSKETLAENKLNLPKMEEKDGC 101 Query: 59 XXXXXXR-GCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 + CL + GL YQ L L + L+ ++ + ++ DL Sbjct: 102 FQSGFNQAICLIRTTAGLLEYQIYLDYLQNEYEGNQENVRDLRKNIRTLIQILKQKIADL 161 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLR 162 PA ++ + + A +L+ L FL+ + R +R Sbjct: 162 ITTPATNTDLLEKMQSSNEWVKNAKIILILRNLENFLQFSLRAIR 206 >scop|:d1alu__:a.26.1.1 (d1alu__:a.26.1.1) Length = 166 Score = 179 bits (454), Expect = 7e-45 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGCLNQL 71 Q+R I + L++ C +C + L ++L +P+ A CL ++ Sbjct: 10 QIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKI 69 Query: 72 HGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAMP 131 GL ++ L+ L +Q+ + + ++L P Sbjct: 70 ITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNL--DAITTPDPTTNA 127 Query: 132 TFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 + + Q + L+ FL+ + R LR + Sbjct: 128 SLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM 166 >sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( Length = 201 Score = 177 bits (451), Expect = 2e-44 Identities = 63/164 (38%), Positives = 84/164 (50%), Gaps = 2/164 (1%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXX 63 Q FL K LE RKI+ D A LQ +C +LC EEL L++ + QAP Sbjct: 36 QLFLHKNLEFTRKIRGDVAALQRAVCDTFQLCTEEELQLVQPDPHLVQAPLDQCHKRGFQ 95 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 C Q+ GL Y L A+ + P ++TLQLD + ++NI QMEDLG Sbjct: 96 AEVCFTQIRAGLHAYHDSLGAVLRLLPNHTTLVETLQLDAANLSSNIQQQMEDLGLDTVT 155 Query: 124 QPTQ--GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 P + PTF+ FQ++ GG + + RFLE AYR LR+LA Sbjct: 156 LPAEQRSPPPTFSGPFQQQVGGFFILANFQRFLETAYRALRHLA 199 >sp|:IL6_CAPHI (Q28319) Interleukin-6 precursor (IL-6) Length = 208 Score = 177 bits (449), Expect = 3e-44 Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 5/165 (3%) Query: 3 PQSFLL----KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXX 58 P LL K ++ I + +++ +C + C + L + L +P+ Sbjct: 42 PSRLLLTTPEKTEALIKHIVDKISAIRKEICEKNDECENSKETLAENKLKLPKMEEKDGC 101 Query: 59 XXXXXXR-GCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 + CL + GL YQ L L T+ LQ + + ++ L Sbjct: 102 FQSGFNQAICLIKTTAGLLEYQIYLDFLQNEFEGNQETVMELQSSIRTLIQILKEKIAGL 161 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLR 162 PA ++ + + A +++ L FL+ + R +R Sbjct: 162 ITTPATNTDMLEKMQSSNEWVKNAKVIIILRSLENFLQFSLRAIR 206 >tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor Length = 241 Score = 174 bits (443), Expect = 2e-43 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 9/168 (5%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQA-PXXXXXXXXX 62 + LL C R ++ +LQ+ +C +C ML+R++L +P+ Sbjct: 68 RRALLDCEPLARVLRDRAVQLQDEMCKKFTVCENSMEMLVRNNLNLPKVTEEDGCLLAGF 127 Query: 63 XXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL +L GLF +Q L+ + +++L A I + + Sbjct: 128 DEEKCLTKLSSGLFAFQTYLEFIQETFDSEKQNVESLCYSTKHLAATIRQMV--INPDEV 185 Query: 123 VQPTQGAMPTFTSAFQR------RAGGVLVASQLHRFLELAYRGLRYL 164 V P A + + + + L+ F+E R +RYL Sbjct: 186 VIPDSAAQKSLLANLKSDKDWIEKITMHLILRDFTSFMEKTVRAVRYL 233 >tr|:Q9MZR1 (Q9MZR1) Interleukin 6 Length = 241 Score = 166 bits (421), Expect = 5e-41 Identities = 25/162 (15%), Positives = 56/162 (34%), Gaps = 11/162 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 + +E +R I EL++ +C C + L +L +P+ C Sbjct: 52 RTIESIRSILETIKELRKEMCDHDVNCMNRKEALAEVNLHLPRLIEEDGCFPPAVNNETC 111 Query: 68 LNQLHGGLFLYQGLLQALAGIS--PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQP 125 L ++ GL ++ L+ L E + + ++ + ++++L ++P Sbjct: 112 LLRITSGLMEFRMYLEHLQAKFRSDEENTRVSMVLKNIQHLIKTLRPKVKNLNEEATLKP 171 Query: 126 TQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGL 161 + Q++ + L FLE R + Sbjct: 172 AVAV--SLMENLQQKNQWLKTTTIHFILRGLTNFLEFTLRAV 211 >sp|:IL6_MARMO (O35736) Interleukin-6 precursor (IL-6) Length = 207 Score = 159 bits (402), Expect = 8e-39 Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 11/163 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQA-PXXXXXXXXXXXRGC 67 K Q+ + + E+++ LC + C + + ++L +P+ C Sbjct: 45 KTRRQISYLIKEVFEMRKELCKNDETCIKSHVAVSENNLNLPKMTEKDGCFQTGYNRDDC 104 Query: 68 LNQLHGGLFLYQGLLQALAGISPE--LAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQP 125 L ++ GL +Q L+ + E + +Q + +++D V P Sbjct: 105 LVRITSGLLEFQVYLRYIRNKFQEGNNRDRAEHVQSSSKALIEILKQEVKD--PNKIVFP 162 Query: 126 TQGAMPTFTSA------FQRRAGGVLVASQLHRFLELAYRGLR 162 + A + +Q+ L+ S FL+ R +R Sbjct: 163 SPTANINLLAKLESQNDWQKVMTMQLILSNFEDFLQFTLRAVR 205 >tr|:Q9WVQ8 (Q9WVQ8) IL-6 (Fragment) Length = 210 Score = 153 bits (388), Expect = 4e-37 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 10/159 (6%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQL 71 V + + EL++ LC + C + +LL ++L +P CL ++ Sbjct: 53 LVTYVLREIYELRKELCNNNPGCMDNDYVLLENNLELPVIQINDGCLQTGYNWEICLLKI 112 Query: 72 HGGLFLYQGLLQALAGI-SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAM 130 GL YQ L+ + +Q + + +++ G V P+ + Sbjct: 113 TSGLLDYQIYLEFVTNNVQDNKKDKARVIQSTIKTLSQIFKQEVK--GPDKIVTPSPTSK 170 Query: 131 PTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 + + L+ L FLE+ R R Sbjct: 171 AILMEKLESQKEWPRTKTIKLILKALEEFLEVTMRSTRQ 209 >sp|:IL6_MOUSE (P08505) Interleukin-6 precursor (IL-6) (Interleu Length = 211 Score = 150 bits (381), Expect = 2e-36 Identities = 27/159 (16%), Positives = 52/159 (31%), Gaps = 10/159 (6%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQL 71 + + + E+++ LC + C + L ++L +P+ CL ++ Sbjct: 54 LITHVLWEIVEMRKELCNGNSDCMNNDDALAENNLKLPEIQRNDGCYQTGYNQEICLLKI 113 Query: 72 HGGLFLYQGLLQALAGIS-PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAM 130 GL Y L+ + LQ D +++DL V PT + Sbjct: 114 SSGLLEYHSYLEYMKNNLKDNKKDKARVLQRDTETLIHIFNQEVKDLH--KIVLPTPISN 171 Query: 131 PTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 T + + + L FL++ R R Sbjct: 172 ALLTDKLESQKEWLRTKTIQFILKSLEEFLKVTLRSTRQ 210 >sp|:IL6_RAT (P20607) Interleukin-6 precursor (IL-6) Length = 211 Score = 138 bits (350), Expect = 1e-32 Identities = 23/159 (14%), Positives = 53/159 (32%), Gaps = 10/159 (6%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQL 71 + + + E+++ LC + C + L ++L +P+ CL ++ Sbjct: 54 LITYVLREILEMRKELCNGNSDCMNSDDALSENNLKLPEIQRNDGCFQTGYNQEICLLKI 113 Query: 72 HGGLFLYQGLLQALAGI-SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAM 130 GL ++ L+ + +Q + +++D + V PT + Sbjct: 114 CSGLLEFRFYLEFVKNNLQDNKKDKARVIQSNTETLVHIFKQEIKD--SYKIVLPTPTSN 171 Query: 131 PTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 + + L+ L FL++ R R Sbjct: 172 ALLMEKLESQKEWLRTKTIQLILKALEEFLKVTMRSTRQ 210 >tr|:Q91ZL3 (Q91ZL3) Interleukin 6 Length = 212 Score = 135 bits (341), Expect = 1e-31 Identities = 23/161 (14%), Positives = 50/161 (30%), Gaps = 10/161 (6%) Query: 11 LEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLN 69 + ++ + ++ + LC + C + L ++L +P CL Sbjct: 53 EGLITRVLKEILQMSKELCNNNPDCMTHDDALSENNLDLPVIERNDGCFQTGYDRENCLL 112 Query: 70 QLHGGLFLYQGLLQALAGI-SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQG 128 ++ GL YQ L+ L +Q + +++D P+ Sbjct: 113 KITSGLLDYQIYLEFLKNNVQDNKKERARVIQNSTKALNQILKQEVKD--PGKTATPSPT 170 Query: 129 AMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 + + + L+ L FL++ R R Sbjct: 171 SKVLLMEKLESQKDWPRTKTIQLILKALEEFLKITMRSTRQ 211 >tr|:O97535 (O97535) Interleukin-6 (Fragment) Length = 160 Score = 135 bits (340), Expect = 1e-31 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%) Query: 3 PQSFLLKCLEQ----VRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXX 57 P LL EQ +R I A L++ +C +C + L ++L +P+ A Sbjct: 42 PNRQLLTSTEQIDKHIRYILEGIAALRKEICDKSNMCESSKEALAENNLNLPKMAEKDGC 101 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFAT 108 CL ++ GL ++ L+ L +Q+ +++ Sbjct: 102 FQSGFNEETCLLKITTGLLEFEVYLEYLQNRFESSKEQAGAVQMSTKAWSS 152 >sp|:IL6_MUSVI (P41693) Interleukin-6 (IL-6) (Fragment) Length = 125 Score = 134 bits (338), Expect = 2e-31 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 11/129 (8%) Query: 43 LRHSLGIPQ-APXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQL 101 ++L +P+ A C+ ++ GL +Q L+ L ++ + Sbjct: 1 AENNLKLPKLAEKDKCFQSQFNQETCMTRITTGLQEFQIHLKYLEANYEGNKNNAHSVYI 60 Query: 102 DVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLE 155 ++ + P + + F+ + L+ L FL+ Sbjct: 61 STKHLL----QKLRPMNQVEVTTPNPTTDSSLQALFKSQDKWLKHVTIHLILRSLEDFLQ 116 Query: 156 LAYRGLRYL 164 + R +R + Sbjct: 117 FSLRAIRIM 125 >tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor Length = 127 Score = 129 bits (325), Expect = 7e-30 Identities = 98/125 (78%), Positives = 99/125 (78%) Query: 41 MLLRHSLGIPQAPXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQ 100 MLL HSLGIPQ GCL+QLH GL LYQGLLQALAGISPELAPTLD LQ Sbjct: 1 MLLGHSLGIPQPLLSSCSSQALQLTGCLSQLHSGLLLYQGLLQALAGISPELAPTLDMLQ 60 Query: 101 LDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRG 160 LDVTDFATNIW QMEDLG AP VQPT G MPTF SAFQRRAGGVLVAS L RFLELAYRG Sbjct: 61 LDVTDFATNIWQQMEDLGVAPVVQPTHGPMPTFASAFQRRAGGVLVASNLQRFLELAYRG 120 Query: 161 LRYLA 165 LRYLA Sbjct: 121 LRYLA 125 >tr|:Q9MZR0 (Q9MZR0) Interleukin 6 (Fragment) Length = 118 Score = 113 bits (285), Expect = 3e-25 Identities = 15/108 (13%), Positives = 38/108 (34%), Gaps = 10/108 (9%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGIS--PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L E + + ++ + ++++ Sbjct: 13 ETCLLRITSGLLEFQMYLEHLQAKFRSEEENTRVSMILKNMRHLINTLRPKVKNFNEGAT 72 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 ++P + + Q++ + L FL+ R +R + Sbjct: 73 LKP--AVVASLMENLQQKDQWLKTTTIHFILRGLTDFLQFTLRSVRLM 118 >tr|:Q9MZQ8 (Q9MZQ8) Interleukin 6 (Fragment)#tr|:Q9MZQ7 (Q9MZQ7) Interleukin 6 (Fragment) Length = 118 Score = 113 bits (283), Expect = 6e-25 Identities = 15/105 (14%), Positives = 38/105 (35%), Gaps = 10/105 (9%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGIS--PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L E + + ++ + ++++L Sbjct: 13 ETCLLRITSGLLEFQMYLEHLQAKFRSDEENTRVSMMLKNIRYLIKTLRPKVKNLNEGAT 72 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGL 161 ++P + + Q++ + L FL+ + R + Sbjct: 73 LKPAI--VASLMKNLQQKDQWLKTTTIHFILRNLTDFLQFSLRAV 115 >tr|:Q8SPS3 (Q8SPS3) Interleukin-6 (Fragment) Length = 70 Score = 68.9 bits (168), Expect = 1e-11 Identities = 14/67 (20%), Positives = 18/67 (25%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQ 124 CL + GL YQ L L + LQ V + + DL P Sbjct: 4 ETCLIRSTVGLLEYQAYLDYLQNEYEGDEENIKDLQSSVRTLLQIMRQKSIDLVTTPTAN 63 Query: 125 PTQGAMP 131 Sbjct: 64 LDLLEKM 70 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: tr|:Q9XT80 (Q9XT80) Interleukin 6 218 1e-56 sp|:IL6_CANFA (P41323) Interleukin-6 precursor (IL-6) 215 1e-55 sp|:IL6_PIG (P26893) Interleukin-6 precursor (IL-6) 214 2e-55 tr|:Q28403 (Q28403) Interleukin 6 (Fragment) 210 2e-54 sp|:IL6_FELCA (P41683) Interleukin-6 precursor (IL-6) 204 2e-52 tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu 203 3e-52 scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) 203 4e-52 sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p 202 5e-52 sp|:IL6_HORSE (Q95181) Interleukin-6 precursor (IL-6) 199 9e-51 sp|:IL6_PHOVI (Q28819) Interleukin-6 precursor (IL-6) (Fragment 198 1e-50 sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre 194 2e-49 tr|:P97712 (P97712) Granulocyte colony stimulating factor 188 1e-47 tn|:AAK92044 (AAK92044) Interleukin-6 188 1e-47 tn|:AAM27192 (AAM27192) Interleukin-6 187 2e-47 sp|:IL6_BOVIN (P26892) Interleukin-6 precursor (IL-6) 187 2e-47 sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p 187 3e-47 sp|:IL6_CAPHI (Q28319) Interleukin-6 precursor (IL-6) 180 4e-45 scop|:d1alu__:a.26.1.1 (d1alu__:a.26.1.1) 179 8e-45 sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( 172 6e-43 tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor 171 1e-42 sp|:IL6_MARMO (O35736) Interleukin-6 precursor (IL-6) 169 6e-42 tr|:Q9MZR1 (Q9MZR1) Interleukin 6 167 3e-41 tr|:Q9WVQ8 (Q9WVQ8) IL-6 (Fragment) 167 3e-41 sp|:IL6_MOUSE (P08505) Interleukin-6 precursor (IL-6) (Interleu 165 7e-41 sp|:IL6_RAT (P20607) Interleukin-6 precursor (IL-6) 161 1e-39 tr|:Q91ZL3 (Q91ZL3) Interleukin 6 160 3e-39 sp|:IL6_MUSVI (P41693) Interleukin-6 (IL-6) (Fragment) 136 6e-32 tr|:O97535 (O97535) Interleukin-6 (Fragment) 133 5e-31 tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor 127 4e-29 tr|:Q9MZR0 (Q9MZR0) Interleukin 6 (Fragment) 115 1e-25 tr|:Q9MZQ8 (Q9MZQ8) Interleukin 6 (Fragment)#tr|:Q9MZQ7 (Q9MZQ7)... 112 7e-25 tr|:Q8SPS3 (Q8SPS3) Interleukin-6 (Fragment) 78 3e-14 Sequences not found previously or not previously below threshold: CONVERGED! >tr|:Q9XT80 (Q9XT80) Interleukin 6 Length = 208 Score = 218 bits (556), Expect = 1e-56 Identities = 27/170 (15%), Positives = 61/170 (35%), Gaps = 10/170 (5%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXX 60 L + K ++ I + +++ +C + C + L ++L +P+ A Sbjct: 40 LLLTSPDKTEALIKYILGKISAMRKEMCEKYDKCENSKEALAENNLNLPKMAEKDGCFQS 99 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 CL ++ GL YQ L L +++ +Q+ + A + +++ Sbjct: 100 GFNQETCLMRITTGLLEYQIYLDYLQNEYEGDKGSIEAVQISIKALAQILRQKVK--NPD 157 Query: 121 PAVQPTQGAMPTFTSAFQRR-------AGGVLVASQLHRFLELAYRGLRY 163 P + + Q + +L+ L FL+ + R +R Sbjct: 158 EVTTPDPTTNASLMNNLQSQNDDWMRNTKIILILRSLENFLQFSLRAVRI 207 >sp|:IL6_CANFA (P41323) Interleukin-6 precursor (IL-6) Length = 207 Score = 215 bits (548), Expect = 1e-55 Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 9/171 (5%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXX 59 SLP + K E ++ I + L++ +C C + L ++L +P+ Sbjct: 39 SLPLTSANKVEELIKYILGKISALRKEMCDKFNKCEDSKEALAENNLHLPKLEGKDGCFQ 98 Query: 60 XXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGA 119 CL ++ GL +Q L L + ++ + + +++ Sbjct: 99 SGFNQETCLTRITTGLVEFQLHLNILQNNYEGDKENVKSVHMSTKILVQMLKSKVK--NQ 156 Query: 120 APAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + Q + L+ L FL+ + R +R + Sbjct: 157 DEVTTPDPTTDASLQAILQSQDECVKHTTIHLILRSLEDFLQFSLRAVRIM 207 >sp|:IL6_PIG (P26893) Interleukin-6 precursor (IL-6) Length = 212 Score = 214 bits (545), Expect = 2e-55 Identities = 26/167 (15%), Positives = 59/167 (34%), Gaps = 9/167 (5%) Query: 5 SFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXX 63 + K E ++ I + +++ +C ++ C + +L ++L +P+ A Sbjct: 48 TSPDKTEELIKYILGKISAMRKEMCEKYEKCENSKEVLAENNLNLPKMAEKDGCFQSGFN 107 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 CL ++ GL +Q L L ++ +Q+ + + + A Sbjct: 108 QETCLMRITTGLVEFQIYLDYLQKEYESNKGNVEAVQISTKALIQTLRQKGK--NPDKAT 165 Query: 124 QPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P Q + +L+ L FL+ + R +R + Sbjct: 166 TPNPTTNAGLLDKLQSQNEWMKNTKIILILRSLEDFLQFSLRAIRIM 212 >tr|:Q28403 (Q28403) Interleukin 6 (Fragment) Length = 207 Score = 210 bits (536), Expect = 2e-54 Identities = 25/169 (14%), Positives = 58/169 (33%), Gaps = 11/169 (6%) Query: 3 PQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXX 61 P + K + ++ I + L+ +C + C + +L ++L +P+ A Sbjct: 43 PLTSADKMEDFIKFILGKISALRNEMCDKYNKCEDSKEVLAENNLNLPKLAEKDRCFQSR 102 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL ++ GL +Q L+ L ++ + + + Sbjct: 103 FNQETCLTRITTGLQEFQIHLKYLESNYEGNKDNAHSVYISTKHLLQTLRP----MNQIE 158 Query: 122 AVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + F+ + L+ +L FL+ + R +R + Sbjct: 159 VTTPDPTTDASLQALFKSQDKWLKHTTIHLILRRLEDFLQFSLRAIRIM 207 >sp|:IL6_FELCA (P41683) Interleukin-6 precursor (IL-6) Length = 208 Score = 204 bits (520), Expect = 2e-52 Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 9/170 (5%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXX 60 LP + K E ++ I + L++ +C + C + L ++L +P+ A Sbjct: 41 LPLTSADKMEELIKYILGKISALKKEMCDNYNKCEDSKEALAENNLNLPKLAEKDGCFQS 100 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 CL ++ GL +Q L+ L ++ + + + Sbjct: 101 GFNQETCLTRITTGLQEFQIYLKFLQDKYEGDEENAKSVYTSTNVLLQMLKRKGK--NQD 158 Query: 121 PAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + Q + L +L FL+ + R +R + Sbjct: 159 EVTIPVPTVEVGLQAKLQSQEEWLRHTTIHLTLRRLEDFLQFSLRAVRIM 208 >tr|:Q9GJU0 (Q9GJU0) Granulocyte colony-stimulating factor precu Length = 195 Score = 203 bits (518), Expect = 3e-52 Identities = 128/163 (78%), Positives = 135/163 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRK+QADG LQERLCAAHKLCHPEEL+LL H+LGIPQAP Sbjct: 29 SLPQSFLLKCLEQVRKVQADGTALQERLCAAHKLCHPEELVLLGHALGIPQAPLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCL QLH GLFLYQGLLQALAGISPELAPTLD LQLD+TDFA NIW QMED+G A Sbjct: 89 ALQLTGCLRQLHSGLFLYQGLLQALAGISPELAPTLDMLQLDITDFAINIWQQMEDVGMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRY 163 PAV PTQG MPTFTSAFQRRAGG LVAS L FLE+AYR LR+ Sbjct: 149 PAVPPTQGTMPTFTSAFQRRAGGTLVASNLQSFLEVAYRALRH 191 >scop|:d1bgc__:a.26.1.1 (d1bgc__:a.26.1.1) Length = 165 Score = 203 bits (517), Expect = 4e-52 Identities = 154/165 (93%), Positives = 154/165 (93%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP Sbjct: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPLSSCSSQ 60 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA Sbjct: 61 SLQLRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA Sbjct: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 >sp|:CSF3_HUMAN (P09919) Granulocyte colony-stimulating factor p Length = 207 Score = 202 bits (516), Expect = 5e-52 Identities = 126/168 (75%), Positives = 135/168 (80%), Gaps = 3/168 (1%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERL---CAAHKLCHPEELMLLRHSLGIPQAPXXXX 57 SLPQSFLLKCLEQVRKIQ DGA LQE+L CA +KLCHPEEL+LL HSLGIP AP Sbjct: 38 SLPQSFLLKCLEQVRKIQGDGAALQEKLVSECATYKLCHPEELVLLGHSLGIPWAPLSSC 97 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 GCL+QLH GLFLYQGLLQAL GISPEL PTLDTLQLDV DFAT IW QME+L Sbjct: 98 PSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEEL 157 Query: 118 GAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 G APA+QPTQGAMP F SAFQRRAGGVLVAS L FLE++YR LR+LA Sbjct: 158 GMAPALQPTQGAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLA 205 >sp|:IL6_HORSE (Q95181) Interleukin-6 precursor (IL-6) Length = 208 Score = 199 bits (506), Expect = 9e-51 Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 10/168 (5%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXX 62 + K + ++ I + L+ +C C + +L ++L +P+ A Sbjct: 44 LTTADKTKQHIKYILGKISALKNEMCNNFSKCENSKEVLAENNLNLPKMAEKDGCFQSGF 103 Query: 63 XXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L + T+Q+ + +M++ Sbjct: 104 NQETCLMKITTGLSEFQIYLEYLQNEFKGEKENIKTMQISTKVLVQILMQKMKN---PEV 160 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P A + + + L+ L FL+ + R +R + Sbjct: 161 TTPDPTAKSSLLAKLHSQNEWLKNTTTHLILRSLEDFLQFSLRAVRIM 208 >sp|:IL6_PHOVI (Q28819) Interleukin-6 precursor (IL-6) (Fragment Length = 209 Score = 198 bits (504), Expect = 1e-50 Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 9/169 (5%) Query: 3 PQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXX 61 P + K E ++ I + L++ +C + C + L ++L +P+ A Sbjct: 43 PLTSPDKMEEFIKYILGKISALRKEMCDKYNKCEDSKEALAENNLRLPKLAEKDGCFQSG 102 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL ++ GL +Q L+ + +++ + + +++ Sbjct: 103 FNQETCLTRITTGLLEFQIHLKYIQANYEGNKEDANSVYISTKLLVQMLMKKVKS--QDE 160 Query: 122 AVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + + + L+ L FL+ + R +R + Sbjct: 161 VTTPDPTTDTSLQAILKAQDKWLKHTTIHLILRSLEDFLQFSLRAVRIM 209 >sp|:CSF3_PIG (O02837) Granulocyte colony-stimulating factor pre Length = 195 Score = 194 bits (494), Expect = 2e-49 Identities = 133/165 (80%), Positives = 137/165 (82%) Query: 1 SLPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXX 60 SLPQSFLLKCLEQVRKIQADGAELQERLCA HKLCHP+EL+LL HSLG+PQA Sbjct: 29 SLPQSFLLKCLEQVRKIQADGAELQERLCATHKLCHPQELVLLGHSLGLPQASLSSCSSQ 88 Query: 61 XXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 GCLNQLHGGL LYQGLLQALAGISPELAP LD LQLDVTD ATNIWLQMEDL A Sbjct: 89 ALQLTGCLNQLHGGLVLYQGLLQALAGISPELAPALDILQLDVTDLATNIWLQMEDLRMA 148 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 PA PTQG +PTFTSAFQRRAGGVLV SQL FLELAYR LRYLA Sbjct: 149 PASLPTQGTVPTFTSAFQRRAGGVLVVSQLQSFLELAYRVLRYLA 193 >tr|:P97712 (P97712) Granulocyte colony stimulating factor Length = 214 Score = 188 bits (479), Expect = 1e-47 Identities = 111/163 (68%), Positives = 120/163 (73%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA EL E+LCA +KLCHPEEL+L HSLGIP+A Sbjct: 36 LPRSFLLKSLEQVRKIQARNTELLEQLCATYKLCHPEELVLFGHSLGIPKASLSSCSSQA 95 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GLFLYQGLLQALAGIS ELAPTLD L LDV +FAT IW QME LG AP Sbjct: 96 LQQTKCLSQLHSGLFLYQGLLQALAGISSELAPTLDMLHLDVDNFATTIWQQMESLGVAP 155 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYL 164 VQPTQ MP FTSAFQRRAGGVLV S L FLE A+ L +L Sbjct: 156 TVQPTQSTMPIFTSAFQRRAGGVLVTSYLQSFLETAHHALHHL 198 >tn|:AAK92044 (AAK92044) Interleukin-6 Length = 212 Score = 188 bits (478), Expect = 1e-47 Identities = 28/173 (16%), Positives = 59/173 (33%), Gaps = 13/173 (7%) Query: 3 PQSFLLKCLEQVR----KIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXX 57 P LL E++ I + L++ +C +C + L ++L +P+ A Sbjct: 42 PNRQLLTSTERIDKHIWYILDGISALRKEICNKSNMCESSKEALAENNLNLPKMAEKDGC 101 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDL 117 CL ++ GL ++ L+ L +Q+ ++ + ++L Sbjct: 102 FQSGFNEETCLLKITTGLLEFEVYLEYLQNRFESSKEQAGAVQMSTKGLIQSLQRKAKNL 161 Query: 118 GAAPAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 P + + Q + L+ FL+ + R LR + Sbjct: 162 S--AIATPDPATNASLLTKLQAQDQWLQGVTTHLILRSFKEFLQCSLRALRQM 212 >tn|:AAM27192 (AAM27192) Interleukin-6 Length = 214 Score = 187 bits (476), Expect = 2e-47 Identities = 20/137 (14%), Positives = 47/137 (33%), Gaps = 3/137 (2%) Query: 5 SFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXX 63 + K E ++ I + +++ +C ++ C + +L ++L +P+ A Sbjct: 48 TSPDKTEELIKYILGKISAMRKEMCEKYEKCENSKEVLAENNLNLPKMAEKDGCFQSGFN 107 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 CL ++ GL +Q L L ++ +Q+ + + + A Sbjct: 108 QETCLMRITTGLVEFQIYLDYLQKEYESNKGNVEAVQISTKALIQTLRQKGK--NPDKAT 165 Query: 124 QPTQGAMPTFTSAFQRR 140 P Q + Sbjct: 166 TPNPTTNAGLLDKLQSQ 182 >sp|:IL6_BOVIN (P26892) Interleukin-6 precursor (IL-6) Length = 208 Score = 187 bits (476), Expect = 2e-47 Identities = 27/162 (16%), Positives = 60/162 (36%), Gaps = 1/162 (0%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 L + K ++++ + +++ +C + C + L + L +P+ Sbjct: 45 LLLTTPEKTEALIKRMVDKISAMRKEICEKNDECESSKETLAENKLNLPKMEEKDGCFQS 104 Query: 62 XXXR-GCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 + CL + GL YQ L L + L+ ++ + ++ DL Sbjct: 105 GFNQAICLIRTTAGLLEYQIYLDYLQNEYEGNQENVRDLRKNIRTLIQILKQKIADLITT 164 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLR 162 PA ++ + + A +L+ L FL+ + R +R Sbjct: 165 PATNTDLLEKMQSSNEWVKNAKIILILRNLENFLQFSLRAIR 206 >sp|:CSF3_MOUSE (P09920) Granulocyte colony-stimulating factor p Length = 208 Score = 187 bits (475), Expect = 3e-47 Identities = 112/164 (68%), Positives = 123/164 (74%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 LP+SFLLK LEQVRKIQA G+ L E+LCA +KLCHPEEL+LL HSLGIP+A Sbjct: 45 LPRSFLLKSLEQVRKIQASGSVLLEQLCATYKLCHPEELVLLGHSLGIPKASLSGCSSQA 104 Query: 62 XXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAP 121 CL+QLH GL LYQGLLQAL+GISP LAPTLD LQLDV +FAT IW QME+LG AP Sbjct: 105 LQQTQCLSQLHSGLCLYQGLLQALSGISPALAPTLDLLQLDVANFATTIWQQMENLGVAP 164 Query: 122 AVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 VQPTQ AMP FTSAFQRRAGGVL S L FLE A L +LA Sbjct: 165 TVQPTQSAMPAFTSAFQRRAGGVLAISYLQGFLETARLALHHLA 208 >sp|:IL6_CAPHI (Q28319) Interleukin-6 precursor (IL-6) Length = 208 Score = 180 bits (457), Expect = 4e-45 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 1/162 (0%) Query: 2 LPQSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXX 61 L + K ++ I + +++ +C + C + L + L +P+ Sbjct: 45 LLLTTPEKTEALIKHIVDKISAIRKEICEKNDECENSKETLAENKLKLPKMEEKDGCFQS 104 Query: 62 XXXR-GCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAA 120 + CL + GL YQ L L T+ LQ + + ++ L Sbjct: 105 GFNQAICLIKTTAGLLEYQIYLDFLQNEFEGNQETVMELQSSIRTLIQILKEKIAGLITT 164 Query: 121 PAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLR 162 PA ++ + + A +++ L FL+ + R +R Sbjct: 165 PATNTDMLEKMQSSNEWVKNAKVIIILRSLENFLQFSLRAIR 206 >scop|:d1alu__:a.26.1.1 (d1alu__:a.26.1.1) Length = 166 Score = 179 bits (454), Expect = 8e-45 Identities = 26/159 (16%), Positives = 54/159 (33%), Gaps = 9/159 (5%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGCLNQL 71 Q+R I + L++ C +C + L ++L +P+ A CL ++ Sbjct: 10 QIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKI 69 Query: 72 HGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAMP 131 GL ++ L+ L +Q+ + + ++L P Sbjct: 70 ITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNL--DAITTPDPTTNA 127 Query: 132 TFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 + + Q + L+ FL+ + R LR + Sbjct: 128 SLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM 166 >sp|:MGF_CHICK (P13854) Myelomonocytic growth factor precursor ( Length = 201 Score = 172 bits (438), Expect = 6e-43 Identities = 63/164 (38%), Positives = 84/164 (50%), Gaps = 2/164 (1%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAPXXXXXXXXXX 63 Q FL K LE RKI+ D A LQ +C +LC EEL L++ + QAP Sbjct: 36 QLFLHKNLEFTRKIRGDVAALQRAVCDTFQLCTEEELQLVQPDPHLVQAPLDQCHKRGFQ 95 Query: 64 XRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAV 123 C Q+ GL Y L A+ + P ++TLQLD + ++NI QMEDLG Sbjct: 96 AEVCFTQIRAGLHAYHDSLGAVLRLLPNHTTLVETLQLDAANLSSNIQQQMEDLGLDTVT 155 Query: 124 QPTQ--GAMPTFTSAFQRRAGGVLVASQLHRFLELAYRGLRYLA 165 P + PTF+ FQ++ GG + + RFLE AYR LR+LA Sbjct: 156 LPAEQRSPPPTFSGPFQQQVGGFFILANFQRFLETAYRALRHLA 199 >tr|:Q90YI0 (Q90YI0) Interleukin-6 precursor Length = 241 Score = 171 bits (435), Expect = 1e-42 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 9/168 (5%) Query: 4 QSFLLKCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQA-PXXXXXXXXX 62 + LL C R ++ +LQ+ +C +C ML+R++L +P+ Sbjct: 68 RRALLDCEPLARVLRDRAVQLQDEMCKKFTVCENSMEMLVRNNLNLPKVTEEDGCLLAGF 127 Query: 63 XXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL +L GLF +Q L+ + +++L A I + + Sbjct: 128 DEEKCLTKLSSGLFAFQTYLEFIQETFDSEKQNVESLCYSTKHLAATIRQMV--INPDEV 185 Query: 123 VQPTQGAMPTFTSAFQR------RAGGVLVASQLHRFLELAYRGLRYL 164 V P A + + + + L+ F+E R +RYL Sbjct: 186 VIPDSAAQKSLLANLKSDKDWIEKITMHLILRDFTSFMEKTVRAVRYL 233 >sp|:IL6_MARMO (O35736) Interleukin-6 precursor (IL-6) Length = 207 Score = 169 bits (429), Expect = 6e-42 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 11/163 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQA-PXXXXXXXXXXXRGC 67 K Q+ + + E+++ LC + C + + ++L +P+ C Sbjct: 45 KTRRQISYLIKEVFEMRKELCKNDETCIKSHVAVSENNLNLPKMTEKDGCFQTGYNRDDC 104 Query: 68 LNQLHGGLFLYQGLLQALAGISP--ELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQP 125 L ++ GL +Q L+ + + +Q + +++D V P Sbjct: 105 LVRITSGLLEFQVYLRYIRNKFQEGNNRDRAEHVQSSSKALIEILKQEVKD--PNKIVFP 162 Query: 126 TQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLR 162 + A + + + L+ S FL+ R +R Sbjct: 163 SPTANINLLAKLESQNDWQKVMTMQLILSNFEDFLQFTLRAVR 205 >tr|:Q9MZR1 (Q9MZR1) Interleukin 6 Length = 241 Score = 167 bits (424), Expect = 3e-41 Identities = 25/165 (15%), Positives = 57/165 (34%), Gaps = 11/165 (6%) Query: 9 KCLEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXXXXXXXXXRGC 67 + +E +R I EL++ +C C + L +L +P+ C Sbjct: 52 RTIESIRSILETIKELRKEMCDHDVNCMNRKEALAEVNLHLPRLIEEDGCFPPAVNNETC 111 Query: 68 LNQLHGGLFLYQGLLQALAGIS--PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQP 125 L ++ GL ++ L+ L E + + ++ + ++++L ++P Sbjct: 112 LLRITSGLMEFRMYLEHLQAKFRSDEENTRVSMVLKNIQHLIKTLRPKVKNLNEEATLKP 171 Query: 126 TQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 + Q++ + L FLE R + + Sbjct: 172 AVAV--SLMENLQQKNQWLKTTTIHFILRGLTNFLEFTLRAVDLM 214 >tr|:Q9WVQ8 (Q9WVQ8) IL-6 (Fragment) Length = 210 Score = 167 bits (424), Expect = 3e-41 Identities = 28/159 (17%), Positives = 54/159 (33%), Gaps = 10/159 (6%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQL 71 V + + EL++ LC + C + +LL ++L +P CL ++ Sbjct: 53 LVTYVLREIYELRKELCNNNPGCMDNDYVLLENNLELPVIQINDGCLQTGYNWEICLLKI 112 Query: 72 HGGLFLYQGLLQALAGI-SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAM 130 GL YQ L+ + +Q + + +++ G V P+ + Sbjct: 113 TSGLLDYQIYLEFVTNNVQDNKKDKARVIQSTIKTLSQIFKQEVK--GPDKIVTPSPTSK 170 Query: 131 PTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 + + L+ L FLE+ R R Sbjct: 171 AILMEKLESQKEWPRTKTIKLILKALEEFLEVTMRSTRQ 209 >sp|:IL6_MOUSE (P08505) Interleukin-6 precursor (IL-6) (Interleu Length = 211 Score = 165 bits (420), Expect = 7e-41 Identities = 27/159 (16%), Positives = 52/159 (31%), Gaps = 10/159 (6%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQL 71 + + + E+++ LC + C + L ++L +P+ CL ++ Sbjct: 54 LITHVLWEIVEMRKELCNGNSDCMNNDDALAENNLKLPEIQRNDGCYQTGYNQEICLLKI 113 Query: 72 HGGLFLYQGLLQALAGIS-PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAM 130 GL Y L+ + LQ D +++DL V PT + Sbjct: 114 SSGLLEYHSYLEYMKNNLKDNKKDKARVLQRDTETLIHIFNQEVKDLH--KIVLPTPISN 171 Query: 131 PTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 T + + + L FL++ R R Sbjct: 172 ALLTDKLESQKEWLRTKTIQFILKSLEEFLKVTLRSTRQ 210 >sp|:IL6_RAT (P20607) Interleukin-6 precursor (IL-6) Length = 211 Score = 161 bits (409), Expect = 1e-39 Identities = 23/159 (14%), Positives = 53/159 (32%), Gaps = 10/159 (6%) Query: 13 QVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLNQL 71 + + + E+++ LC + C + L ++L +P+ CL ++ Sbjct: 54 LITYVLREILEMRKELCNGNSDCMNSDDALSENNLKLPEIQRNDGCFQTGYNQEICLLKI 113 Query: 72 HGGLFLYQGLLQALAGI-SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQGAM 130 GL ++ L+ + +Q + +++D + V PT + Sbjct: 114 CSGLLEFRFYLEFVKNNLQDNKKDKARVIQSNTETLVHIFKQEIKD--SYKIVLPTPTSN 171 Query: 131 PTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 + + L+ L FL++ R R Sbjct: 172 ALLMEKLESQKEWLRTKTIQLILKALEEFLKVTMRSTRQ 210 >tr|:Q91ZL3 (Q91ZL3) Interleukin 6 Length = 212 Score = 160 bits (406), Expect = 3e-39 Identities = 23/161 (14%), Positives = 50/161 (30%), Gaps = 10/161 (6%) Query: 11 LEQVRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQAP-XXXXXXXXXXXRGCLN 69 + ++ + ++ + LC + C + L ++L +P CL Sbjct: 53 EGLITRVLKEILQMSKELCNNNPDCMTHDDALSENNLDLPVIERNDGCFQTGYDRENCLL 112 Query: 70 QLHGGLFLYQGLLQALAGI-SPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQPTQG 128 ++ GL YQ L+ L +Q + +++D P+ Sbjct: 113 KITSGLLDYQIYLEFLKNNVQDNKKERARVIQNSTKALNQILKQEVKD--PGKTATPSPT 170 Query: 129 AMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRY 163 + + + L+ L FL++ R R Sbjct: 171 SKVLLMEKLESQKDWPRTKTIQLILKALEEFLKITMRSTRQ 211 >sp|:IL6_MUSVI (P41693) Interleukin-6 (IL-6) (Fragment) Length = 125 Score = 136 bits (343), Expect = 6e-32 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 11/129 (8%) Query: 43 LRHSLGIPQ-APXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQL 101 ++L +P+ A C+ ++ GL +Q L+ L ++ + Sbjct: 1 AENNLKLPKLAEKDKCFQSQFNQETCMTRITTGLQEFQIHLKYLEANYEGNKNNAHSVYI 60 Query: 102 DVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLE 155 ++ + P + + F+ + L+ L FL+ Sbjct: 61 STKHLL----QKLRPMNQVEVTTPNPTTDSSLQALFKSQDKWLKHVTIHLILRSLEDFLQ 116 Query: 156 LAYRGLRYL 164 + R +R + Sbjct: 117 FSLRAIRIM 125 >tr|:O97535 (O97535) Interleukin-6 (Fragment) Length = 160 Score = 133 bits (336), Expect = 5e-31 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 5/111 (4%) Query: 3 PQSFLLKCLEQ----VRKIQADGAELQERLCAAHKLCHPEELMLLRHSLGIPQ-APXXXX 57 P LL EQ +R I A L++ +C +C + L ++L +P+ A Sbjct: 42 PNRQLLTSTEQIDKHIRYILEGIAALRKEICDKSNMCESSKEALAENNLNLPKMAEKDGC 101 Query: 58 XXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFAT 108 CL ++ GL ++ L+ L +Q+ +++ Sbjct: 102 FQSGFNEETCLLKITTGLLEFEVYLEYLQNRFESSKEQAGAVQMSTKAWSS 152 >tn|:AAM34205 (AAM34205) Granulocyte colony-stimulating factor Length = 127 Score = 127 bits (319), Expect = 4e-29 Identities = 98/125 (78%), Positives = 99/125 (78%) Query: 41 MLLRHSLGIPQAPXXXXXXXXXXXRGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQ 100 MLL HSLGIPQ GCL+QLH GL LYQGLLQALAGISPELAPTLD LQ Sbjct: 1 MLLGHSLGIPQPLLSSCSSQALQLTGCLSQLHSGLLLYQGLLQALAGISPELAPTLDMLQ 60 Query: 101 LDVTDFATNIWLQMEDLGAAPAVQPTQGAMPTFTSAFQRRAGGVLVASQLHRFLELAYRG 160 LDVTDFATNIW QMEDLG AP VQPT G MPTF SAFQRRAGGVLVAS L RFLELAYRG Sbjct: 61 LDVTDFATNIWQQMEDLGVAPVVQPTHGPMPTFASAFQRRAGGVLVASNLQRFLELAYRG 120 Query: 161 LRYLA 165 LRYLA Sbjct: 121 LRYLA 125 >tr|:Q9MZR0 (Q9MZR0) Interleukin 6 (Fragment) Length = 118 Score = 115 bits (289), Expect = 1e-25 Identities = 15/108 (13%), Positives = 38/108 (34%), Gaps = 10/108 (9%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGIS--PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L E + + ++ + ++++ Sbjct: 13 ETCLLRITSGLLEFQMYLEHLQAKFRSEEENTRVSMILKNMRHLINTLRPKVKNFNEGAT 72 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 ++P + + Q++ + L FL+ R +R + Sbjct: 73 LKP--AVVASLMENLQQKDQWLKTTTIHFILRGLTDFLQFTLRSVRLM 118 >tr|:Q9MZQ8 (Q9MZQ8) Interleukin 6 (Fragment)#tr|:Q9MZQ7 (Q9MZQ7) Interleukin 6 (Fragment) Length = 118 Score = 112 bits (282), Expect = 7e-25 Identities = 15/108 (13%), Positives = 39/108 (35%), Gaps = 10/108 (9%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGIS--PELAPTLDTLQLDVTDFATNIWLQMEDLGAAPA 122 CL ++ GL +Q L+ L E + + ++ + ++++L Sbjct: 13 ETCLLRITSGLLEFQMYLEHLQAKFRSDEENTRVSMMLKNIRYLIKTLRPKVKNLNEGAT 72 Query: 123 VQPTQGAMPTFTSAFQRR------AGGVLVASQLHRFLELAYRGLRYL 164 ++P + + Q++ + L FL+ + R + + Sbjct: 73 LKPAI--VASLMKNLQQKDQWLKTTTIHFILRNLTDFLQFSLRAVGLM 118 >tr|:Q8SPS3 (Q8SPS3) Interleukin-6 (Fragment) Length = 70 Score = 77.7 bits (191), Expect = 3e-14 Identities = 14/67 (20%), Positives = 18/67 (25%) Query: 65 RGCLNQLHGGLFLYQGLLQALAGISPELAPTLDTLQLDVTDFATNIWLQMEDLGAAPAVQ 124 CL + GL YQ L L + LQ V + + DL P Sbjct: 4 ETCLIRSTVGLLEYQAYLDYLQNEYEGDEENIKDLQSSVRTLLQIMRQKSIDLVTTPTAN 63 Query: 125 PTQGAMP 131 Sbjct: 64 LDLLEKM 70 Database: /data/tmp/fabascal/DBASE/scop+nr100.faa.nrdb90.reformated Posted date: Jul 30, 2002 10:40 AM Number of letters in database: 166,026,790 Number of sequences in database: 475,909 Lambda K H 0.312 0.181 0.523 Lambda K H 0.267 0.0555 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 343,087,452 Number of Sequences: 475909 Number of extensions: 17061274 Number of successful extensions: 53486 Number of sequences better than 5.0e-03: 112 Number of HSP's better than 0.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 53199 Number of HSP's gapped (non-prelim): 115 length of query: 165 length of database: 166,026,790 effective HSP length: 108 effective length of query: 57 effective length of database: 114,628,618 effective search space: 6533831226 effective search space used: 6533831226 T: 11 A: 40 X1: 15 ( 6.8 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (20.5 bits) S2: 94 (40.4 bits)