Alignment of Peptidase_S58 vs UserSeq/1-344

                   *->mNsITDVkGvkVGhytlidpdasLgagkPvrcGVTaiLPhpgtvgav
                      mNsITDV+G++VGhy+++dpdasLgag  ++cGVT++LP+pgtvgav
     UserSeq     1    MNSITDVGGIRVGHYQRLDPDASLGAG--WACGVTVVLPPPGTVGAV 45   

                   dvraGvfvvnGtretdgldplnsvgfvdapllltntayigaAadGvlrWl
                   d+r+G   ++Gtretd+ldp+nsv+fvda+ll++++ay++aAadGv+rWl
     UserSeq    46 DCRGG---APGTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWL 92   

                   eEhnrgvvmtdGfLWVvPiVPGaeifDlalnDingrPtvkfgyvakAlar
                   eEh+rgv+m++G   VvPiVPGa+ifDl+++++n+rPt++fgy+a+A+a+
     UserSeq    93 EEHRRGVAMDSG---VVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAG 139  

                   daavGvadedvaeGtVGaGtGmrAgefKGGvGTASrvvEseGkgfTVGAL
                           +dva+GtVG+G+G+rAg++KGGvGTAS++++s   g+TVG+L
     UserSeq   140 --------VDVAVGTVGVGVGARAGALKGGVGTASATLQS---GVTVGVL 178  

                   VvvNfggrvvltiaGvPWmaDvgqelalrtPpsqeqiaGlAQLkSPLsAl
                   +vvN++g+vv++++G+PWmaD+++e+alr +p++eqia+lAQL+SPL+A+
     UserSeq   179 AVVNAAGNVVDPATGLPWMADLVGEFALR-APPAEQIAALAQLSSPLGAF 227  

                   NtPfnsiIgViATDapLsPaqlkRvAkrAsvGLARtgrPAhnalsGDivv
                   NtPfn++IgViA+Da+LsPa+++R+A++A++GLARt+rPAh++l+GD+v+
     UserSeq   228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVF 277  

                   AfsTanvRPikhreaevlevksledelittvgaAAaDcveeAVlnavLaA
                   A++T++v  ++++ea+v++++s+e++l+t+vgaAAaDc+++AVl++vL+A
     UserSeq   278 ALATGAV--AVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNA 325  

                   edmaGiPfDRtlrqalPgEalga<-*
                   +++aGiP   t+r+++Pg a+g+   
     UserSeq   326 QPVAGIP---TYRDMFPG-AFGS    344  

Alignment of MnhB vs UserSeq/59-154

                   *->slIlktvarlvaplillfglylflrGHlsPGGGFqgGliiAiaflLl
                       l ++  +r+v +                        l++A +    
     UserSeq    59    LLDPANSVRFVDA------------------------LLLAGGSAYG 81   

                   yiafgievvekflptnyialegiGglllialltlvglllfGypflnqGdf
                   + a +  v++++++ +    + +G          v++++ G+  ++    
     UserSeq    82 LAAADG-VMRWLEEHRRGVAMDSG----------VVPIVPGAVIFD---- 116  

                   gyfflplvGfegrP.pdlleaglitalnfdvGlkvgvggvgvfil<-*
                       lp+ G + rP+    ++g +  +  +v ++vg++gvgv+     
     UserSeq   117 ----LPVGGWNCRPtA---DFGYSACAAAGVDVAVGTVGVGVGAR    154  

Alignment of DUF320 vs UserSeq/148-199

                   *->gaagaasadagAeGaAvgSPGVlSGNvVQvPVHvPVNvCGNtvdVVG
                      g++ +a a+a  +G ++ S  + SG  V v V   VN+ GN vd   
     UserSeq   148    GVGVGARAGALKGGVGTASATLQSG--VTVGVLAVVNAAGNVVD--- 189  

                   lLNPAfGNeCeNd<-*
                      PA+G    +d   
     UserSeq   190 ---PATGLPWMAD    199  

Alignment of Sulfate_transp vs UserSeq/7-256

                   *->lGllRLGfLveflSravi.sGFmaGaAilI..........llsQLkg
                       G  R+G + ++ ++a +++G   G+ ++++++++ +  ++    +g
     UserSeq     7    VGGIRVGHYQRLDPDASLgAGWACGVTVVLpppgtvgavdCRGGAPG 53   

                   llGlsnlftrhsgivsvlralfdlvdnlhdflkwnwatlvigisfLifLl
                      ++  +  +   v ++ al+                          L+
     UserSeq    54 TRETD--LLDPANSVRFVDALL--------------------------LA 75   

                   iikllpnpkkrkkklfwvpapapLvavilaTlisylfnrhkladrygv..
                    +  ++                    + +a +++ ++      +r+gv  
     UserSeq    76 GGSAYG--------------------LAAADGVMRWL----EEHRRGVam 101  

                   .sivGeipsGlpppslPrlnlspstlldllpialalAlvgllesiltaks
                   +s v  i +G   ++lP   ++     d    a+a+A v ++++      
     UserSeq   102 dSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGT----- 146  

                   fakikgykiDsNkELvAqGiaNIvgslfggypatgsfsRSavNvkaGakT
                                  v++G++  +g l gg  ++ ++ +S v v      
     UserSeq   147 ---------------VGVGVGARAGALKGGVGTASATLQSGVTVG----- 176  

                   qLSgivmavvvllvlLfltplley...iP.mavLaaIiivaligmLidws
                             vl v+  ++ ++ + +++P ma L++   + ++    +++
     UserSeq   177 ----------VLAVVNAAGNVVDPatgLPwMADLVGEFALRAPP-AEQIA 215  

                   elirllwklsklDfliwlatffgtvfvdNleiGvlvGVaiSllflilrv<
                   +l   l   +   f + + t +g++  d   +++  +   ++ ++++   
     UserSeq   216 ALAQ-LS-SPLGAFNTPFNTTIGVIACD---AALSPA---ACRRIAIAA  256  

                   -*
                     
     UserSeq     -    -    

Alignment of Cation_efflux vs UserSeq/63-274

                   *->lwislalnlllavvKliaGllsgSlALlaDavHslsDvaasliaLla
                      +  + ++ +ll+++  ++Gl                 +a  ++ +l 
     UserSeq    63    ANSVRFVDALLLAGGSAYGLA----------------AADGVMRWL- 92   

                   lriarkPaDrrhpfGhgRaEiLaalinavllfvvglggfilyeaierlls
                            ++h+ G       +a+ ++v+ +v g    i+   +  +  
     UserSeq    93 ---------EEHRRG-------VAMDSGVVPIVPGA--VIFDLPVGGWNC 124  

                   PyeeedsShgdahepvdpglialivalis.lvvnlllalyllrvgkktns
                                ++ d+g  ++++a++ + +v ++ + +  r+g+  ++
     UserSeq   125 R------------PTADFG-YSACAAAGVdVAVGTVGVGVGARAGALKGG 161  

                   gdpalraaalHvlsDlLgSlgvlvgalliyftgnglheWpwaDPiaallI
                       +        s++L+S +++  + +    gn      ++DP+ +   
     UserSeq   162 ----VG-----TASATLQSGVTVGVLAVVNAAGN------VVDPATG--- 193  

                   sllIlktafrllkesvniLldgvppeedlekireillsipgVkgvhdlrt
                       l++  +l+ e ++    ++pp e+++   + l+s  g  + +    
     UserSeq   194 ----LPWMADLVGEFAL----RAPPAEQIA-ALAQLSSPLG--AFNTPFN 232  

                   wsiGpgefvlsvHievdpdlsleeaheiadeieerlleefpeiehvtihv
                    +i  g ++       d++ls+    +++ +i  +++ + +  ++++   
     UserSeq   233 TTI--GVIAC------DAALSP----AACRRI--AIAAHDG-LARTIRPA 267  

                   epeglee<-*
                   ++  +++   
     UserSeq   268 HTPLDGD    274  

Alignment of Hydantoinase_A vs UserSeq/134-317

                   *->RtvTavlNAyLsPi...vrrylealedalkerGikaplmvmqSDGGL
                       + +a ++ ++  ++ +v     al+                  GG+
     UserSeq   134    ACAAAGVDVAVGTVgvgVGARAGALK------------------GGV 162  

                   vsaeeArrkPvetilSGPAAGvvGAaylgrlaGlknaIvfDmGGTSTDvs
                    +a+        t+ SG + Gv++++     aG+    v+D         
     UserSeq   163 GTAS-------ATLQSGVTVGVLAVVN---AAGN----VVD--------- 189  

                   liidGepeissegevvgvHhGRvKGgGyptrvp......mldirtvgaGG
                   + + G p     ++ v         g++ +r+p+ ++  +l+  ++++G 
     UserSeq   190 PAT-GLP---WMADLV---------GEFALRAPpaeqiaALAQLSSPLG- 225  

                   GSivwwvddggalrvGPeSaGadPgplAAaYPfleLeknrprgldeiiQp
                      +  +++  + ++G   + a   p                        
     UserSeq   226 ---A--FNTPFNTTIGVIACDAALSP------------------------ 246  

                   TkFFVrsgeLeEreacygkGGeplTvTDAnlvLGrlnpedflkifGPgGd
                                                  ++ r+ +            
     UserSeq   247 ------------------------------AACRRIAIA----------- 255  

                   mkldveaArrafeeLAdplglsveevAegilrianetmarairllGeyte
                                                    a + +ar ir       
     UserSeq   256 ---------------------------------AHDGLARTIRPA----- 267  

                   WdeAsriGAelLgrlmgeeFcaVKrvarNmAdLlFfegkelkllaesver
                                                                     
     UserSeq     - -------------------------------------------------- -    

                   GldprdfplvafGGaGplhaaelAeelGikeViippypgVlsAvGallAd
                    +  +  +++a+  ++ ++++e     G++  + p+  +   AvGa++Ad
     UserSeq   268 HTPLDGDTVFALATGAVAVPPEA----GVPAALSPET-QLVTAVGAAAAD 312  

                   vraev<-*
                   + a++   
     UserSeq   313 CLARA    317  

Alignment of BPD_transp_2 vs UserSeq/100-342

                   *->nlfniltqasilgiaALGltlvfGiaGvinLgvggqmalGaayvaal
                       ++++++ + + + +   + l++   G++n    + ++ + a++aa 
     UserSeq   100    AMDSGVVPIVPGAVI---FDLPV---GGWNCRPTADFGYS-ACAAAG 139  

                   llalggsnglaflggvdnllwlallagllvgaavGllnGlLvvrlkvnev
                   + ++               +    + + + ++a+ + +G +++ l     
     UserSeq   140 VDVA---------------VGTVGVGVGARAGALKGGVGTASATLQSGVT 174  

                   ivtlllnfilrgltlllvtgilggpvgsstsvallgfpgallsfgfglif
                   + +l++  ++ ++++           g ++  +l g++++ ++ + +  +
     UserSeq   175 VGVLAVVNAAGNVVD--------PATGLPWMADLVGEFALRAPPAEQIAA 216  

                   fklilvalagipwagflgvgipvpillalllallvwllLrrTrfGralrA
                                            l+ l   l ++    +T++G++   
     UserSeq   217 -------------------------LAQLSSPLGAFNTPFNTTIGVIACD 241  

                   vGenprAAryaGinv..krtkllafvls.....GalAGlAGallvlslgs
                   ++ +p+A+r+  i  ++   +++  + ++ +++ ++A   Ga+ v    +
     UserSeq   242 AALSPAACRRIAIAAhdGLARTIRPAHTpldgdTVFALATGAVAVPPEAG 291  

                   adpesnaglglgfdaiaavv...lGGasLgGGrGspiGvvvGaliigllq
                   +++    +   + +a++a+  + l++a                 +++ + 
     UserSeq   292 VPAA-LSPETQLVTAVGAAAadcLARA-----------------VLAGVL 323  

                   slgltllgiiflglnlpvggpelsllvqGailiavl<-*
                   +     +gi           p + +++ Ga         
     UserSeq   324 N-AQPVAGI-----------PTYRDMFPGAF-----    342