Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
Hit list size
Sequences with E-value BETTER than threshold
Related Structures
Score E
Sequences producing significant alignments:
(bits) Value
gi|15608473|ref|NP_215849.1| hypothetical protein Rv1333 [Mycoba... 393 e-108
gi|15827589|ref|NP_301852.1| possible hydrolase [Mycobacterium l... 383 e-105
gi|41408525|ref|NP_961361.1| hypothetical protein MAP2427c [Myco... 371 e-102
gi|18310404|ref|NP_562338.1| conserved hypothetical protein [Clo... 366 e-100
gi|37526152|ref|NP_929496.1| hypothetical protein [Photorhabdus ... 361 7e-99
gi|20808213|ref|NP_623384.1| L-aminopeptidase/D-esterase [Thermo... 347 2e-94
gi|39936874|ref|NP_949150.1| Peptidase family T4 [Rhodopseudomon... 335 8e-91
gi|17989243|ref|NP_541876.1| ENDO-TYPE 6-AMINOHEXANOATE OLIGOMER... 322 8e-87
gi|13470389|ref|NP_101957.1| hypothetical protein [Mesorhizobium... 321 1e-86
gi|23500102|ref|NP_699542.1| conserved hypothetical protein [Bru... 320 3e-86
gi|16126426|ref|NP_420990.1| conserved hypothetical protein [Cau... 316 4e-85
gi|27380789|ref|NP_772318.1| blr5678 [Bradyrhizobium japonicum] 316 5e-85
gi|21325284|dbj|BAB99906.1| L-aminopeptidase/D-esterase [Coryneb... 311 1e-83
gi|19553713|ref|NP_601715.1| L-aminopeptidase/D-esterase [Coryne... 307 2e-82
gi|15965508|ref|NP_385861.1| CONSERVED HYPOTHETICAL PROTEIN [Sin... 306 4e-82
gi|38234425|ref|NP_940192.1| Conserved hypothetical protein [Cor... 295 1e-78
gi|25028963|ref|NP_739017.1| conserved hypothetical protein [Cor... 294 1e-78
gi|17936440|ref|NP_533230.1| conserved hypothetical protein [Agr... 290 3e-77
gi|15889823|ref|NP_355504.1| AGR_C_4649p [Agrobacterium tumefaci... 289 5e-77
gi|22971282|ref|ZP_00018257.1| hypothetical protein [Chloroflexu... 289 6e-77
gi|21221628|ref|NP_627407.1| conserved hypothetical protein SCE2... 284 2e-75
gi|29830227|ref|NP_824861.1| hypothetical protein [Streptomyces ... 266 4e-70
gi|30577697|emb|CAD18988.1| putative cysteine transferase [Strep... 260 2e-68
gi|15898366|ref|NP_342971.1| Conserved hypothetical protein [Sul... 258 1e-67
gi|23061446|ref|ZP_00086291.1| COG3191: L-aminopeptidase/D-ester... 256 4e-67
gi|423943|pir||A47039 nylon oligomer-degrading enzyme EIII nylC ... 236 6e-61
gi|15805808|ref|NP_294506.1| conserved hypothetical protein [Dei... 232 8e-60
gi|26990549|ref|NP_745974.1| D-aminopeptidase putative [Pseudomo... 227 2e-58
gi|32041534|ref|ZP_00139117.1| COG3191: L-aminopeptidase/D-ester... 177 3e-43
gi|15596683|ref|NP_250177.1| hypothetical protein [Pseudomonas a... 177 4e-43
gi|38103362|gb|EAA50063.1| hypothetical protein MG03822.4 [Magna... 133 4e-30
gi|16119469|ref|NP_396175.1| AGR_pAT_343p [Agrobacterium tumefac... 128 1e-28
gi|14590032|ref|NP_142096.1| D-aminopeptidase [Pyrococcus horiko... 128 2e-28
gi|18978296|ref|NP_579653.1| d-aminopeptidase [Pyrococcus furios... 125 1e-27
gi|14520302|ref|NP_125777.1| d-aminopeptidase. [Pyrococcus abyss... 123 5e-27
gi|37526171|ref|NP_929515.1| hypothetical protein [Photorhabdus ... 121 3e-26
gi|5821800|pdb|1B65|A Chain A, Structure Of L-Aminopeptidase D-A... 116 6e-25 
gi|20807555|ref|NP_622726.1| L-aminopeptidase/D-esterase [Thermo... 108 2e-22
gi|13475743|ref|NP_107310.1| D-aminopeptidase [Mesorhizobium lot... 102 1e-20
gi|22975947|ref|ZP_00021868.1| COG3191: L-aminopeptidase/D-ester... 99 1e-19
gi|13472247|ref|NP_103814.1| probable D-aminopeptidase [Mesorhiz... 94 4e-18
gi|23036948|ref|ZP_00069168.1| COG3191: L-aminopeptidase/D-ester... 91 3e-17
gi|23098305|ref|NP_691771.1| D-aminopeptidase [Oceanobacillus ih... 90 6e-17
gi|23500278|ref|NP_699718.1| D-aminopeptidase, putative [Brucell... 86 7e-16
gi|17989086|ref|NP_541719.1| D-AMINOPEPTIDASE [Brucella melitens... 86 8e-16
gi|23009700|ref|ZP_00050653.1| COG3191: L-aminopeptidase/D-ester... 86 9e-16
gi|22984022|ref|ZP_00029183.1| COG3191: L-aminopeptidase/D-ester... 84 3e-15
gi|16262501|ref|NP_435294.1| putative D-aminopeptidase [Sinorhiz... 83 7e-15
gi|17546102|ref|NP_519504.1| PROBABLE D-AMINOPEPTIDASE PROTEIN [... 81 3e-14
gi|33593381|ref|NP_881025.1| probable D-aminopeptidase [Bordetel... 80 9e-14
gi|33597782|ref|NP_885425.1| probable D-aminopeptidase [Bordetel... 79 1e-13
gi|23038492|ref|ZP_00070632.1| COG3191: L-aminopeptidase/D-ester... 73 5e-12
gi|15889775|ref|NP_355456.1| AGR_C_4562p [Agrobacterium tumefaci... 64 5e-09
Sequences with E-value WORSE than threshold
gi|28210592|ref|NP_781536.1| conserved protein [Clostridium teta... 48 2e-04
gi|28875488|gb|AAO59969.1| putative aminopeptidase [uncultured b... 45 0.003
gi|23111287|ref|ZP_00096975.1| COG3191: L-aminopeptidase/D-ester... 44 0.004
gi|32566780|ref|NP_505174.2| peptidoglycan-binding LysM and GRAM... 34 3.5 
gi|26991199|ref|NP_746624.1| conserved hypothetical protein [Pse... 34 4.0
gi|39590311|emb|CAE66050.1| Hypothetical protein CBG11250 [Caeno... 34 4.0
gi|32566776|ref|NP_505173.2| peptidoglycan-binding LysM and GRAM... 34 4.0
gi|22976051|ref|ZP_00021963.1| COG1364: N-acetylglutamate syntha... 34 4.3
gi|17987468|ref|NP_540102.1| H+ TRANSLOCATING PYROPHOSPHATE SYNT... 34 4.4
gi|32566782|ref|NP_872149.1| peptidoglycan-binding LysM and GRAM... 34 5.1
gi|23058719|ref|ZP_00083754.1| COG0729: Outer membrane protein [... 33 6.7
gi|22299454|ref|NP_682701.1| ORF_ID:tll1911~arginine biosynthesi... 33 6.7
gi|18419442|gb|AAL69328.1| inorganic pyrophosphatase [Brucella m... 33 6.7
gi|23501658|ref|NP_697785.1| V-type H(+)-translocating pyrophosp... 33 6.9
gi|33301205|sp|Q8YGH4|HPPA_BRUME Pyrophosphate-energized proton ... 33 7.5
gi|21232003|ref|NP_637920.1| TonB-dependent receptor [Xanthomona... 33 7.8
gi|21243469|ref|NP_643051.1| TonB-dependent receptor [Xanthomona... 33 9.4
Alignments
>gi|15608473|ref|NP_215849.1| hypothetical protein Rv1333 [Mycobacterium tuberculosis H37Rv]
Length = 344
Score = 393 bits (1010), Expect = e-108
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL
Sbjct: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG
Sbjct: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
Query: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV
Sbjct: 121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
Query: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC
Sbjct: 181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
Query: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET
Sbjct: 241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
Query: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS
Sbjct: 301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
>gi|15827589|ref|NP_301852.1| possible hydrolase [Mycobacterium leprae]
Length = 362
Score = 383 bits (984), Expect = e-105
Identities = 268/352 (76%), Positives = 287/352 (81%), Gaps = 12/352 (3%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MNSITD+ GI+VGHY RLDPDASLGAGWACGVTVVL PPGTVGAVDCRGG PGTRETDLL
Sbjct: 8 MNSITDISGIQVGHYHRLDPDASLGAGWACGVTVVLTPPGTVGAVDCRGGVPGTRETDLL 67
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPANSVRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGV M GVVPIVPGAVIFDL VG
Sbjct: 68 DPANSVRFVDAVLLAGGSAYGLAAADGVMRWLEEHERGVVMLGGVVPIVPGAVIFDLSVG 127
Query: 121 GWNCRPTADFGYSACAAAG--------VDVAVGTVGVGVGARAGALKGGVGTASATLQSG 172
++CRPTA+FGY AC AA VAVGTVG GVGARAG LKGGVGTAS TL+SG
Sbjct: 128 DFHCRPTAEFGYLACQAAYDAAVGGQDATVAVGTVGAGVGARAGVLKGGVGTASITLESG 187
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
TVG + VVN+ G+VVD ATGLPWM DL+ EFALR P EQIA AQL SPL A N
Sbjct: 188 PTVGAVVVVNSVGDVVDRATGLPWMTDLIDEFALRPPSPEQIAGFAQLKSPLSA----LN 243
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIGV+A DA LSPAAC+R+A+AA DGLARTIRPAHT LDGDTVFALATGAV A V
Sbjct: 244 TTIGVVATDATLSPAACQRVAMAAQDGLARTIRPAHTALDGDTVFALATGAVEATATADV 303
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
P A+SPET L+T VGAAA DCLARAVL VL A+ VAGIPTY MFPGAFG+
Sbjct: 304 PVAMSPETGLITEVGAAADDCLARAVLVAVLAAESVAGIPTYCGMFPGAFGT 355
>gi|41408525|ref|NP_961361.1| hypothetical protein MAP2427c [Mycobacterium avium subsp.
paratuberculosis str. k10]
Length = 347
Score = 371 bits (955), Expect = e-102
Identities = 278/346 (80%), Positives = 294/346 (84%), Gaps = 3/346 (0%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
MN+ITDVGGIRVGH+QRLDPDASLGAGWACGVTVVL PGTVGAVDCRGGAPGTRETDLL
Sbjct: 1 MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLL 60
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
DPAN+VRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGVAMD GVVPIVPGAVIFDLPVG
Sbjct: 61 DPANTVRFVDAVLLAGGSAYGLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVG 120
Query: 121 GWNCRPTADFGYSACAAAGVDVA---VGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
GW CRPTA+FGY ACAAA D VGTVG GVGARAGALKGGVGTAS TL SGVTVG
Sbjct: 121 GWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGALKGGVGTASRTLPSGVTVGA 180
Query: 178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
LAVVN+AG VVD ATGLPWM DLV +F LR PPAEQI A A L SP + P NT I V
Sbjct: 181 LAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV 240
Query: 238 IACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALS 297
+A DAALS AACRR+A+AAHDGLAR+IRPAHTP+DGDTVF LATGAV VPPEA PAA S
Sbjct: 241 VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFS 300
Query: 298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFG 343
PET+L T VG AAADCLA AVL GVL A VAGIP+YRD+ PGA G
Sbjct: 301 PETRLATEVGVAAADCLAHAVLGGVLAADSVAGIPSYRDVLPGALG 346
>gi|18310404|ref|NP_562338.1| conserved hypothetical protein [Clostridium perfringens]
Length = 325
Score = 366 bits (941), Expect = e-100
Identities = 123/343 (35%), Positives = 172/343 (50%), Gaps = 36/343 (10%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
ITD+ G ++GH Q + A G TV+L G G VD RGGAPGTRETDLL+P
Sbjct: 6 ITDIDGFKLGHAQDFEG--------ATGCTVLLCEEGASGGVDVRGGAPGTRETDLLNPM 57
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWN 123
V V A++L+GGSA+GL + GVM +LE G + VPIV GAV+FDL G
Sbjct: 58 EMVDKVHAIVLSGGSAFGLDSCSGVMEYLENKNVGFDVGVAKVPIVCGAVLFDLACGNPK 117
Query: 124 CRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGA-------LKGGVGTASATLQSGVT 174
RP + G AC + +D G +G G GA G +KGG G+ + + +
Sbjct: 118 IRPNKEMGLEACKNSETYLDSKNGNIGCGTGATVGKALNQKLAMKGGFGSYAVQVGD-LK 176
Query: 175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
VG + VN+ G++VDP +A + + E+ + LA S+P F NTT
Sbjct: 177 VGAIVGVNSLGDIVDPNNNNKIIAGGLSQDRNSFINIEE-SLLANYSNPKNVFK--GNTT 233
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG I + + A +IA A +G RTIRPAHT DGDT+F L++ V
Sbjct: 234 IGCIVTNGDFNKAEANKIASMAQNGFGRTIRPAHTMFDGDTIFTLSSNKVKAD------- 286
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
+ VG AA + +A++ V A G +++D+
Sbjct: 287 --------INVVGLLAAQVMEKAIIKAVKEADSSYGFLSHKDL 321
>gi|37526152|ref|NP_929496.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 325
Score = 361 bits (929), Expect = 7e-99
Identities = 137/344 (39%), Positives = 187/344 (54%), Gaps = 36/344 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
+I DV G++VGH + G ++++ G V VD RG APGTRET+LLD
Sbjct: 6 GTILDVPGVKVGHAED--------ELQQTGCSIIIFDDGAVCGVDVRGSAPGTRETELLD 57
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N+V+ V+A++L+GGSA+GL +A GVMR+LEE ++G + VVPIVP A+IFDL G
Sbjct: 58 PINTVQKVNAVVLSGGSAFGLDSASGVMRYLEERKKGFDVGVTVVPIVPAAIIFDLNFGD 117
Query: 122 WNCRPTADFGYSACAAAG-VDVAVGTVGVGVGARAGA-------LKGGVGTASATLQSGV 173
RP A GY A A G +G G GA G +KGG+GTAS L G+
Sbjct: 118 PAVRPDAKMGYLAAQNASVTPFPSGNIGAGTGATIGKIAGFDKAMKGGLGTASVKLPDGL 177
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT 233
T+G + VVNA G + DP G + G + I + + ++ F NT
Sbjct: 178 TIGAMVVVNAVGEIRDPKNG----KTIAGACDENGHLIDLIPYIIK-NNKDNNFTQGTNT 232
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVP 293
TIG+I C+A ++ + +++A AHDGLARTI P HT DGDT+FA ATG V
Sbjct: 233 TIGIICCNANMNKSQMKKVAQMAHDGLARTIYPVHTMSDGDTIFAAATGGVD-------- 284
Query: 294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
V VG AA+ +A AVL V +A+ G+ Y D+
Sbjct: 285 -------SSVNIVGILAAEVMAAAVLDAVKSAKSKFGVRGYADL 321
>gi|20808213|ref|NP_623384.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
Length = 324
Score = 347 bits (892), Expect = 2e-94
Identities = 133/343 (38%), Positives = 180/343 (52%), Gaps = 38/343 (11%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
I ++ GI+VG+ + ++ G TVV+ G VD RGGAPGTRETDL+
Sbjct: 8 IKEIEGIKVGNAENVEAG--------TGCTVVICEEGATPGVDVRGGAPGTRETDLIRSE 59
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWN 123
N V + A++LAGGSA+GL AA GVMR+LEE G +PIV A++FDL VG
Sbjct: 60 NLVEKIHAVVLAGGSAFGLDAASGVMRYLEEKGIGFDTGVLKIPIVASAILFDLAVGNPY 119
Query: 124 CRPTADFGYSACAAA-GVDVAVGTVGVGVGARAGA-------LKGGVGTASATLQSG-VT 174
RP + GY AC A + G G G GA G +K G+G LQ+G +
Sbjct: 120 IRPDFEMGYKACVNAEKGEFTYGNKGAGTGASVGKFLGIKRAMKSGLGC--YALQAGELK 177
Query: 175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
VG + VNA G+V DP TG +A L+ E + E+ A + + F NTT
Sbjct: 178 VGAVVAVNALGDVFDPETG-EVIAGLLDEKGEKIISTEE-AIIENIGREKSVFRN--NTT 233
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IGV+ +A LS A ++A AHDG AR I+P HT DGDT+F +ATG V V P
Sbjct: 234 IGVVITNAMLSKAEANKVASMAHDGYARAIKPVHTMFDGDTIFVMATGKVKVDP------ 287
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
T+VG A + RA++ V A+ G+ +Y+D+
Sbjct: 288 ---------TSVGVLAVKAVERAIVRAVKEAESAYGLKSYKDL 321
>gi|39936874|ref|NP_949150.1| Peptidase family T4 [Rhodopseudomonas palustris]
Length = 349
Score = 335 bits (860), Expect = 8e-91
Identities = 141/348 (40%), Positives = 181/348 (52%), Gaps = 29/348 (8%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+RVGH A GVT +L V ++D RGG PG R+ LL+
Sbjct: 18 NLITDVAGVRVGHAHDHK--------LASGVTAILFDKPAVASIDVRGGGPGIRDGALLE 69
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N+V +D L+GGSA+GL + GV WL E RG A+ + +PIVPGAV+FD+ GG
Sbjct: 70 PVNTVEQIDGFTLSGGSAFGLDSGGGVQAWLAERGRGFAIGNATIPIVPGAVVFDMINGG 129
Query: 122 WNCR----PTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
P D GY+A AAG A+G+VG G+GA LKGG+G+ASAT GVTVG
Sbjct: 130 DKAWGRFSPYRDLGYAAADAAGDSFALGSVGAGLGATTATLKGGLGSASATTPGGVTVGA 189
Query: 178 LAVVNAAGNVVDPATGLPWMADL--VGEFALRAPPAEQIAALAQLS-SPLGAFNTPFNTT 234
+AVVNA G+ W A GEF P + ++ A + NTT
Sbjct: 190 IAVVNAIGSATIGDGPWFWSAPFEQDGEFGGLGMPESFTPDMLKVRLKGAAAASAIENTT 249
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
+ + DA L+ +R+A+ A G AR I P H PLDGD VFA ATG V P AG
Sbjct: 250 LVAVVTDANLTKPQVKRLAMLAQTGFARAIYPVHAPLDGDVVFAAATGVKPVEPLAG--- 306
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQP---VAGIPTYRDMFP 339
+T +G AA+ +ARA+ GV A P +RD F
Sbjct: 307 --------LTELGTIAANTVARAIARGVYEATALPFKDAQPAWRDRFG 346
>gi|17989243|ref|NP_541876.1| ENDO-TYPE 6-AMINOHEXANOATE OLIGOMER HYDROLASE [Brucella melitensis]
Length = 335
Score = 322 bits (826), Expect = 8e-87
Identities = 144/346 (41%), Positives = 181/346 (52%), Gaps = 36/346 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
SITDV GI++GH+ G +V+L G VD RG APGTRETDLLD
Sbjct: 7 GSITDVPGIKLGHHTLTRR--------PTGCSVLLCEEGATAGVDVRGSAPGTRETDLLD 58
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N V+ V A+LL+GGSAYGLAAA GVMR+LEE+ G + GVVPIVP A++ DL VG
Sbjct: 59 PINFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGD 118
Query: 122 WNCRPTADFGYSACAAA-GVDVAVGTVGVGVGARAGA-------LKGGVGTASATLQS-G 172
++ RP + GY AC AA G +G G GA G +KGG+GTAS +
Sbjct: 119 FSVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYAMKGGLGTASYKVPGTE 178
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
+ VG + VNA G+V P + L G A + + N
Sbjct: 179 IVVGAIVAVNAVGDVRAPNSHRI----LAGARTEDGKGFRNTMAAIMQGHGV-VKSGGAN 233
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIG IA +A A ++IA AHDG ARTI P HT DGDT+FAL+TG
Sbjct: 234 TTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFALSTGKAK------- 286
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRD 336
VTA+GA AA +A AV V+ A+ P +P +RD
Sbjct: 287 -----DGQADVTAIGAIAASVMADAVARAVVQAESLPHLNLPAHRD 327
>gi|13470389|ref|NP_101957.1| hypothetical protein [Mesorhizobium loti]
Length = 341
Score = 321 bits (823), Expect = 1e-86
Identities = 146/350 (41%), Positives = 179/350 (51%), Gaps = 35/350 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+RVG+ GVT +L V V GGAPGTRETDLL+
Sbjct: 8 NLITDVAGLRVGNSSDARLK--------SGVTTILCDEPAVAGVQILGGAPGTRETDLLE 59
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P NS+ + A++L+GGSA+GL AA GV L E G + VPIVP A++FDL GG
Sbjct: 60 PHNSIEAIHAVVLSGGSAFGLDAASGVQAALRERGVGFEVGGFRVPIVPAAILFDLRNGG 119
Query: 122 W----NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
P D GY A +A D +GTVG G GA LKGG+G+AS L +GVT+G
Sbjct: 120 DKDWGRYPPYRDLGYEAAQSAATDFQLGTVGAGTGALTAGLKGGLGSASTLLDTGVTIGA 179
Query: 178 LAVVNAAGNVVDPATGLPWMADL-----VGEFALRAP-PAEQIAALAQLSSPLGA--FNT 229
LA VN G+V T W A G +P PA+ L + T
Sbjct: 180 LAAVNPTGSVTVGRTRHLWAAPFEIGDEFGGLGYPSPMPADAKEILLKYRDKHAGKQMET 239
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
NTTI VIA DA L+ AA +R+A++AHDG R I P HTP DGD VFALATG + E
Sbjct: 240 GGNTTIAVIATDAVLTKAAAKRLAMSAHDGFVRAIWPTHTPADGDLVFALATGTSGIRLE 299
Query: 290 AGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
A + AAA +ARA+ GV A P D+FP
Sbjct: 300 AD----------AAIDLYAAAGATMARAIGRGVFAATPADN-----DLFP 334
>gi|23500102|ref|NP_699542.1| conserved hypothetical protein [Brucella suis 1330]
Length = 368
Score = 320 bits (821), Expect = 3e-86
Identities = 144/346 (41%), Positives = 181/346 (52%), Gaps = 36/346 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
SITDV GI++GH+ G +V+L G VD RG APGTRETDLLD
Sbjct: 40 GSITDVPGIKLGHHTLTRR--------PTGCSVLLCEEGATAGVDVRGSAPGTRETDLLD 91
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N V+ V A+LL+GGSAYGLAAA GVMR+LEE+ G + GVVPIVP A++ DL VG
Sbjct: 92 PINFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGD 151
Query: 122 WNCRPTADFGYSACAAA-GVDVAVGTVGVGVGARAGA-------LKGGVGTASATLQS-G 172
++ RP + GY AC AA G +G G GA G +KGG+GTAS +
Sbjct: 152 FSVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYAMKGGLGTASYKVPGTE 211
Query: 173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
+ VG + VNA G+V P + L G A + + N
Sbjct: 212 IVVGAIVAVNAVGDVRAPNSHRI----LAGARTEDGKGFRNTMAAIMQGHGV-VKSGGAN 266
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
TTIG IA +A A ++IA AHDG ARTI P HT DGDT+FAL+TG
Sbjct: 267 TTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFALSTGKAK------- 319
Query: 293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRD 336
VTA+GA AA +A AV V+ A+ P +P +RD
Sbjct: 320 -----DGQADVTAIGAIAASVMADAVARAVVQAESLPHLNLPAHRD 360
>gi|16126426|ref|NP_420990.1| conserved hypothetical protein [Caulobacter crescentus CB15]
Length = 330
Score = 316 bits (811), Expect = 4e-85
Identities = 135/334 (40%), Positives = 169/334 (50%), Gaps = 25/334 (7%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G++VG + GVTVVL P AVD RGG P RETD L
Sbjct: 8 NLITDVPGLKVGCVED--------EAVRTGVTVVLCPEAWTAAVDVRGGGPAVRETDTLR 59
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
P NS A+ +GGS +GL AADGV L G+ + +G +PIVP A + DL
Sbjct: 60 PENSFSKAHAICFSGGSVFGLGAADGVASALSNRDVGLRITAGTPAIPIVPAACLHDLSN 119
Query: 120 GGWNCR----PTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV 175
GG P G A AAG D +G VG G GA AG GG+G+AS L G+ V
Sbjct: 120 GGDKAWGLTPPYRALGMKAVEAAGEDFPLGPVGAGRGAMAGLRPGGLGSASLDLGDGLIV 179
Query: 176 GVLAVVNAAGNVV--DPATGLPWMADLVGEFALRAPP--AEQIAALAQLSSPLGAFNTPF 231
L N G+ D T W ++ GEF R P A I L S
Sbjct: 180 AALVAANPVGSAYMADGETFWAWPFEIDGEFGGRRPGTMAPAIEPLPDDSKLGARLAAGA 239
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
NTT+ ++A A LS A +R+A+ AHDG+AR +RP HTP DGD VFALA+GA + +
Sbjct: 240 NTTLALVATTADLSTAEAQRMAMMAHDGMARAVRPCHTPFDGDVVFALASGAKPLGEDP- 298
Query: 292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNA 325
+ L T +G+AAADCLARA+ V +
Sbjct: 299 ------MRSVLRTRIGSAAADCLARAMARAVYES 326
>gi|27380789|ref|NP_772318.1| blr5678 [Bradyrhizobium japonicum]
Length = 332
Score = 316 bits (810), Expect = 5e-85
Identities = 139/349 (39%), Positives = 183/349 (52%), Gaps = 29/349 (8%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ G+RVGH + A A G T ++ V A+D RGG PGTRE LLD
Sbjct: 3 NLLTDIAGVRVGHAED--------AKVASGTTAIIFDSPAVAAIDVRGGGPGTREDALLD 54
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
AN+V VDA+ L+GGSA+GL GV WL E RG + ++PIVPGA++FDL GG
Sbjct: 55 LANTVERVDAIALSGGSAFGLDTGGGVQAWLAEQGRGHRVREALIPIVPGAILFDLLNGG 114
Query: 122 WNCR----PTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
P D GY+A AAAG D A+G+VG G+GA KGG+G+ASA GV V
Sbjct: 115 DKAWGRFSPYRDLGYAAAAAAGTDFAIGSVGAGLGATTATFKGGLGSASAVTPDGVKVAA 174
Query: 178 LAVVNAAGNVVDPATGLPWMADL--VGEFALRAPPAEQIAALAQLSSPLG-AFNTPFNTT 234
+ VNA G+V W A GE+ R P + + ++ G A + NTT
Sbjct: 175 IVAVNAVGSVTVGNGPWFWAAPFEVDGEYGGRGLPDKFTDDMLRMRIKGGPAASARENTT 234
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ +R+A+ AH G AR I P H P DGD ++A AT + P G
Sbjct: 235 IGAVVTDAVLTKPQAKRLAMIAHTGFARAIYPVHAPTDGDVLYAAATCEKPIEPLVG--- 291
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQP---VAGIPTYRDMFPG 340
+T +G AA+ +ARA+ GV A P +RD F G
Sbjct: 292 --------LTELGTVAANVVARAIARGVYCATALPFGGAQPAWRDRFGG 332
>gi|21325284|dbj|BAB99906.1| L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
Length = 320
Score = 311 bits (798), Expect = 1e-83
Identities = 136/340 (40%), Positives = 179/340 (52%), Gaps = 41/340 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV G +GH + D G +VV+ P G VD RGG PGTRETDLL+P
Sbjct: 18 LIDVAGFLLGHVTKGD----------TGCSVVIAPNGAFAGVDVRGGGPGTRETDLLEPH 67
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGV--AMDSGVVPIVPGAVIFDLPVGG 121
NSV+ A++L GGSA+GLAAADGVM LE G + +VPIVPGAVIFDL VG
Sbjct: 68 NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 127
Query: 122 WNCRPTADFGYSA--CAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
RPTA G A A AG G+VG G GA AG L+GG G +S + T+
Sbjct: 128 PKNRPTAADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRV-GKYTIAAGV 186
Query: 180 VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIA 239
V N G VVD TG + V L + NTTIGV+A
Sbjct: 187 VANPVGEVVDLTTGALFGRPEVMGVG---------------VDKLKSAAETLNTTIGVVA 231
Query: 240 CDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPE 299
DA ++ A +R+A+ AHDGLAR +RP+H+P+DGDT FA+++G
Sbjct: 232 TDAPVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAMSSG-----------DGSGVT 280
Query: 300 TQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
+ + A AADC+ A++ +L A P G+ ++R++ P
Sbjct: 281 PVELAELSAHAADCVQDAIIDAILTASPGLGLKSFRELLP 320
>gi|19553713|ref|NP_601715.1| L-aminopeptidase/D-esterase [Corynebacterium glutamicum ATCC 13032]
Length = 304
Score = 307 bits (788), Expect = 2e-82
Identities = 136/340 (40%), Positives = 179/340 (52%), Gaps = 41/340 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV G +GH + D G +VV+ P G VD RGG PGTRETDLL+P
Sbjct: 2 LIDVAGFLLGHVTKGD----------TGCSVVIAPNGAFAGVDVRGGGPGTRETDLLEPH 51
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGV--AMDSGVVPIVPGAVIFDLPVGG 121
NSV+ A++L GGSA+GLAAADGVM LE G + +VPIVPGAVIFDL VG
Sbjct: 52 NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 111
Query: 122 WNCRPTADFGYSA--CAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
RPTA G A A AG G+VG G GA AG L+GG G +S + T+
Sbjct: 112 PKNRPTAADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRV-GKYTIAAGV 170
Query: 180 VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIA 239
V N G VVD TG + V L + NTTIGV+A
Sbjct: 171 VANPVGEVVDLTTGALFGRPEVMGVG---------------VDKLKSAAETLNTTIGVVA 215
Query: 240 CDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPE 299
DA ++ A +R+A+ AHDGLAR +RP+H+P+DGDT FA+++G
Sbjct: 216 TDAPVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAMSSG-----------DGSGVT 264
Query: 300 TQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
+ + A AADC+ A++ +L A P G+ ++R++ P
Sbjct: 265 PVELAELSAHAADCVQDAIIDAILTASPGLGLKSFRELLP 304
>gi|15965508|ref|NP_385861.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 334
Score = 306 bits (785), Expect = 4e-82
Identities = 133/297 (44%), Positives = 160/297 (53%), Gaps = 19/297 (6%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N ITDV G+ VG+ + + GVT VL P AV GGAPGTRETDLL
Sbjct: 7 NLITDVPGLLVGNAEDIRLK--------SGVTAVLCDPPATAAVQVLGGAPGTRETDLLA 58
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P N+V+ VDA++L+GGSA+GL AA GV L E RG A+ VPIVP A++FDL GG
Sbjct: 59 PHNTVQAVDAIVLSGGSAFGLDAASGVQAALREMGRGFAVGPHRVPIVPAAILFDLANGG 118
Query: 122 W----NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
P D GY A A D G+ G G GA KGG+G+AS L +G+TVG
Sbjct: 119 DKDWGRYAPYRDLGYQAARAVSADFGTGSTGAGTGALTATFKGGLGSASTVLSNGITVGA 178
Query: 178 LAVVNAAGNVVDPATGLPWMADL-----VGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
L VNA G+ T W A G P + AA A T N
Sbjct: 179 LVAVNAIGSATVGDTRHFWAAPFEMDDEFGGLGQPTPWPQDAAAPRFKFRERQASAT--N 236
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
TTI VIA DA L+ A +R+AIAAHDG +R + P+HTPLDGD VFAL+TG P
Sbjct: 237 TTIAVIATDALLTKAEAKRLAIAAHDGFSRALWPSHTPLDGDLVFALSTGTSGKAPL 293
>gi|38234425|ref|NP_940192.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 310
Score = 295 bits (756), Expect = 1e-78
Identities = 145/341 (42%), Positives = 187/341 (54%), Gaps = 39/341 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
M + DV G+ VGH D G TVV+ P +GAVD RGG PGTRETDLL
Sbjct: 1 MGGLIDVPGVLVGHRSLGD----------TGCTVVVMPESAIGAVDVRGGGPGTRETDLL 50
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPV 119
+P N+V+ V A++L+GGSA+GLA ADGVMR L+ G + GV VPIVPGAVIFDL V
Sbjct: 51 EPHNTVQRVHAVVLSGGSAFGLATADGVMRALDSRGIGFPVPGGVSVPIVPGAVIFDLLV 110
Query: 120 GGWNCRPTADFGYSACAAA---GVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
G RPTA G +A A G AVG+VG G A AG L+GG G AS V V
Sbjct: 111 GDPYHRPTAADGEAAVRDAFDGGSAAAVGSVGAGCAATAGVLRGGFGQASQRAGDYV-VA 169
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIG 236
V N G+VVDP +G W V + S L T NTTIG
Sbjct: 170 AGVVANPVGSVVDPRSGRLWADPDVR-------------VDCEKFSQLKGLETKLNTTIG 216
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAAL 296
VIA DA ++ A +R+A+ HDG+A IRPAH+PLDGDT+FA++TG
Sbjct: 217 VIATDAPVTKAQAQRLAMVGHDGIAVAIRPAHSPLDGDTLFAISTG-----------DGA 265
Query: 297 SPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
+ + + AAA+ +A+A+++ V+NA G+ ++
Sbjct: 266 GVDVDTLAQLSRAAAEVVAQAIVSAVVNATSAYGMTALSEI 306
>gi|25028963|ref|NP_739017.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 317
Score = 294 bits (755), Expect = 1e-78
Identities = 152/344 (44%), Positives = 193/344 (56%), Gaps = 42/344 (12%)
Query: 4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
+ DV GI +GH D GVTVV+ P G VD RGG PGTRETDLL+P
Sbjct: 8 LCDVPGIHLGHVTSGD----------TGVTVVVAPGGAFAGVDVRGGGPGTRETDLLEPH 57
Query: 64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAM-----DSGVVPIVPGAVIFDLP 118
N+V+ V A+ L GGSAYGLAAADGVM LEE G + +VPIVP AVIFDL
Sbjct: 58 NTVQQVHAVALCGGSAYGLAAADGVMYALEERGIGFPVLGPDRPGPIVPIVPAAVIFDLL 117
Query: 119 VGGWNCRPTADFGYSAC--AAAGVDVAV-GTVGVGVGARAGALKGGVGTASATLQSGVTV 175
VG RPT + G +A A AG V G++G G GA AG L+GG G AS T+ V V
Sbjct: 118 VGDPTNRPTREHGLTAVDHALAGRQREVSGSIGAGTGATAGHLRGGFGQASTTVGEFV-V 176
Query: 176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI 235
V N G VVDP TG + A PA + LA + P NTTI
Sbjct: 177 AAGIVANPVGEVVDPTTGTLYGA--------PGRPAVDVDKLAAVPHPAA----DLNTTI 224
Query: 236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAA 295
GVIA +A ++ A +R+A+ HDGLAR +RP+H+P+DGDT+FAL+TG
Sbjct: 225 GVIATNAPVTKAQAKRLALTGHDGLARAVRPSHSPMDGDTLFALSTG-----------DG 273
Query: 296 LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
+ L+ ++ AAAADC+ A++ V +A P G+ TYR++ P
Sbjct: 274 TGVDATLLASLCAAAADCVQNAIVDAVTSASPGHGLTTYRELIP 317
>gi|17936440|ref|NP_533230.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58
(U. Washington)]
Length = 334
Score = 290 bits (743), Expect = 3e-77
Identities = 138/351 (39%), Positives = 172/351 (49%), Gaps = 32/351 (9%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ GI VG+ L GVT ++ V + GGAPG R+T LLD
Sbjct: 6 NLLTDIDGILVGNVTDLSLG--------SGVTAIVFEKPAVASGSVLGGAPGGRDTGLLD 57
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P+ +V VDAL+L+GGSA+GL AA GV L E RG+ + S VPIVP A++ D+ GG
Sbjct: 58 PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 117
Query: 122 WN----CRPTADFGYSACAAAG-VDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
P + GY+A AAG +GT G G GA KGG+G+ASA G V
Sbjct: 118 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 177
Query: 177 VLAVVNAAGNVVDPATGLPWMADL--VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+ VNA G+ + W A GEF PA A L TT
Sbjct: 178 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALRLKGVNLTA---TT 234
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ A R++I AHDGLAR + PAH P DGDT+FA ATG P E G A
Sbjct: 235 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATG--DKPQEGG--A 290
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIP-TYRDMFPGAF 342
+ L T +ARAV GV A PV G YRD+ F
Sbjct: 291 HFAELCYLATI-------VMARAVARGVYEATALPVDGAQRAYRDIHGRGF 334
>gi|15889823|ref|NP_355504.1| AGR_C_4649p [Agrobacterium tumefaciens]
Length = 355
Score = 289 bits (741), Expect = 5e-77
Identities = 138/351 (39%), Positives = 172/351 (49%), Gaps = 32/351 (9%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N +TD+ GI VG+ L GVT ++ V + GGAPG R+T LLD
Sbjct: 27 NLLTDIDGILVGNVTDLSLG--------SGVTAIVFEKPAVASGSVLGGAPGGRDTGLLD 78
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P+ +V VDAL+L+GGSA+GL AA GV L E RG+ + S VPIVP A++ D+ GG
Sbjct: 79 PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 138
Query: 122 WN----CRPTADFGYSACAAAG-VDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
P + GY+A AAG +GT G G GA KGG+G+ASA G V
Sbjct: 139 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 198
Query: 177 VLAVVNAAGNVVDPATGLPWMADL--VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+ VNA G+ + W A GEF PA A L TT
Sbjct: 199 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALRLKGVNLTA---TT 255
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
IG + DA L+ A R++I AHDGLAR + PAH P DGDT+FA ATG P E G A
Sbjct: 256 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATG--DKPQEGG--A 311
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIP-TYRDMFPGAF 342
+ L T +ARAV GV A PV G YRD+ F
Sbjct: 312 HFAELCYLATI-------VMARAVARGVYEATALPVDGAQRAYRDIHGRGF 355
>gi|22971282|ref|ZP_00018257.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 354
Score = 289 bits (740), Expect = 6e-77
Identities = 165/346 (47%), Positives = 194/346 (56%), Gaps = 41/346 (11%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
+IT V G+ VG D GVTVVL P G VD RGGAPGTRETDLL+P
Sbjct: 39 AITAVQGVLVGQVADQDA--------LTGVTVVLTPNGATAGVDVRGGAPGTRETDLLNP 90
Query: 63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
N V+ V A++L GGSA+GLAAA GV+ WL E G + VPIVP AVIFDL +G
Sbjct: 91 VNLVQQVHAVVLTGGSAFGLAAATGVVSWLHERGYGFDVGLTKVPIVPAAVIFDLGIGRS 150
Query: 123 NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGA-------LKGGVGTASATLQSGVTV 175
+ P A GY+AC AA VA G+VG G+GA G ++GGVG+ S TL GVTV
Sbjct: 151 DVWPDATMGYAACMAAEAAVAEGSVGAGIGATVGKVGGMATAMRGGVGSWSETLADGVTV 210
Query: 176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF----NTPF 231
G LAVVNA G+VVD + A RAP I A L S L T
Sbjct: 211 GALAVVNAFGDVVDDHGRIIAGA--------RAPDQSLIGTSALLRSGLSRRSFADTTGQ 262
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
NTTI V+A DA L AA R+A+ A DGLAR IRPAH+P DGDTVFALATG PP
Sbjct: 263 NTTIAVVATDARLDKAAATRLAMMAQDGLARAIRPAHSPFDGDTVFALATGVYEAPP--- 319
Query: 292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
+ +GA AAD LA A++ V A AG+P RD+
Sbjct: 320 -----------LVTLGAVAADVLATAIMRAVQAATAAAGVPAARDL 354
>gi|21221628|ref|NP_627407.1| conserved hypothetical protein SCE22.10 [Streptomyces coelicolor
A3(2)]
Length = 348
Score = 284 bits (727), Expect = 2e-75
Identities = 167/358 (46%), Positives = 204/358 (56%), Gaps = 30/358 (8%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDL 59
++++TDV G+ VGH R G GW G TVVL P G V VD RGG PGT+ETD
Sbjct: 3 VDALTDVAGLLVGHATRT------GDGWLTGTTVVLAPEGGAVAGVDVRGGGPGTKETDA 56
Query: 60 LDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFD 116
LDP N V+ V A++L GGSAYGL AA GVM WLEE RGV + + VVP+VP A +FD
Sbjct: 57 LDPRNLVQKVQAVVLTGGSAYGLDAASGVMAWLEERGRGVRVGPDPAHVVPVVPAACVFD 116
Query: 117 LPVGG-WNCRPTADFGY-----SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
L GG + RP A GY + +A G VA G VG G GA GALKGGVGTAS L
Sbjct: 117 LGRGGDFRARPDAVTGYAAVAAAHASAPGAAVAEGCVGAGTGAVVGALKGGVGTASTVLD 176
Query: 171 SGVTVGVLAVVNAAGNVVDPATGLPWMADLV-GEFALRAPPAEQIAALAQLSSPLGAFNT 229
SG+TV L V NAAG+V DP TG+ + G AP + A
Sbjct: 177 SGITVAALVVANAAGSVTDPETGVLYGELFRGGRVEYPAPEVHEAAGRRLAEVAARNAPP 236
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
P NTT+ V+A DA LS A +++A AHDG+AR +RP H DGDTVFALATG P +
Sbjct: 237 PLNTTLAVVATDAGLSKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFALATGV--RPLD 294
Query: 290 AGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG----IPTYRDMFPGAFG 343
AG P A + V AA AD + RA++ V A+PV G P+Y ++ G G
Sbjct: 295 AGQPLA-------LNEVLAAGADVVTRAIVRAVRAAEPVDGPGGAWPSYGGLYGGPDG 345
>gi|29830227|ref|NP_824861.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 342
Score = 266 bits (682), Expect = 4e-70
Identities = 149/352 (42%), Positives = 196/352 (55%), Gaps = 27/352 (7%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
++++TDV G+RVGH R G V+ P G V AVD RGG PGT+ETD L
Sbjct: 3 VDALTDVAGLRVGHATRTGGGWLTGTTV-----VLAPEGGAVAAVDVRGGGPGTKETDAL 57
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFDL 117
DP N V+ V+A++L GGSAYGL +A GVM WLEE RRGV + + VVP+VP A +FDL
Sbjct: 58 DPRNLVQRVEAVVLTGGSAYGLDSASGVMAWLEEQRRGVRVGPDPAHVVPVVPAACVFDL 117
Query: 118 PVGG-WNCRPTADFG-----YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
GG + RP A G +A + G V G VG G GA G +KGGVGTAS L S
Sbjct: 118 GRGGDFRARPDAATGRAAVEAAAASEPGAPVPEGCVGAGTGAVVGQVKGGVGTASTVLGS 177
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF 231
G+TV L V NAAG+ VDP TG+ + G A + A + P
Sbjct: 178 GITVAALVVANAAGSTVDPETGVLYGELFQGRVVYPADGVHEAARRRLAETAAKNAPPPL 237
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
NTT+ V+A DA L+ A +++A AHDG+AR +RP H DGDTVF LATGA +P ++
Sbjct: 238 NTTLAVVATDAELTKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFTLATGAHPLPSDSP 297
Query: 292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG----IPTYRDMFP 339
+ + V AA AD + RA++ V A+ G P+Y +++
Sbjct: 298 LA---------LNEVLAAGADVVTRAIVRAVRAAESADGPGGTWPSYGELYG 340
>gi|30577697|emb|CAD18988.1| putative cysteine transferase [Streptomyces cattleya]
Length = 399
Score = 260 bits (667), Expect = 2e-68
Identities = 169/373 (45%), Positives = 204/373 (54%), Gaps = 39/373 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVL-PPPGTVGAVDCRGGAPGTRETDLL 60
N +TDV G+RVGH R G GW GVTVVL PP G V AVD RGG PGTRETD L
Sbjct: 33 NGLTDVPGVRVGHAGRT------GDGWLTGVTVVLAPPGGAVAAVDVRGGGPGTRETDAL 86
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDS---GVVPIVPGAVIFDL 117
DP N V+ +DA++L GGSA+GL AA GV WLEE RG + + VVP+VP A +FDL
Sbjct: 87 DPRNLVQTIDAVVLTGGSAFGLDAAGGVAAWLEEQGRGFPVGADPSQVVPVVPAAALFDL 146
Query: 118 PVGG-WNCRPTADFG-----YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
GG W RP A G +A G V G VG G GA G LKGG+GTAS L S
Sbjct: 147 GRGGTWRARPDAALGRAAVEAAAARPEGDPVEQGGVGAGTGAVVGGLKGGIGTASVVLDS 206
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPPAEQIAA------------L 217
G TV LA VNAAG+ VDPATG+ + A L GEFA P A
Sbjct: 207 GATVAALAAVNAAGSAVDPATGVLYGARTGLPGEFAGYGVPDAIGADTHARARARLAEAA 266
Query: 218 AQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVF 277
+ + NTT+ V+A DA L+ A +++A AHDGLAR +RP H DGDTVF
Sbjct: 267 EETARRRAGGAATLNTTLAVVATDATLTRAQAQKLAGTAHDGLARAVRPVHLLSDGDTVF 326
Query: 278 ALATGAVAVPPE-----AGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNA----QPV 328
AL+TG + P+ A + E + V AA AD L RAV+ VL A P
Sbjct: 327 ALSTGRRPLLPDRPDATAARAFGVHLEAGALNEVLAAGADVLTRAVVHAVLAATGVDTPG 386
Query: 329 AGIPTYRDMFPGA 341
P+YR+++
Sbjct: 387 GVHPSYRELYARP 399
>gi|15898366|ref|NP_342971.1| Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 282
Score = 258 bits (660), Expect = 1e-67
Identities = 91/291 (31%), Positives = 136/291 (46%), Gaps = 44/291 (15%)
Query: 7 VGGIRVGHYQRLDPDASLGAGWACGVTVVLPP-PGTVGAVDCRGGAPGTRETDLLDPAN- 64
+ GI+VG Y GVTV+L + RGG+P T TDLL P +
Sbjct: 5 INGIKVGGYTDEKSK--------SGVTVILSEIENNTAGISQRGGSPATLGTDLLRPKHR 56
Query: 65 SVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPVGGWN 123
+ V+A++L G S +G+ D V+ L E G + + +PIV A IFD
Sbjct: 57 GNQSVNAIVLTGRSVFGIRVVDAVLMKLFELGVGFKISQNLKIPIVVSASIFDFYDN--T 114
Query: 124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS-------GVTVG 176
PT D+GY+A + G D+ +G G GA G LK G+ A + Q + +G
Sbjct: 115 IMPTPDWGYNAMSNLGYDIPIGRYWAGRGATVGKLK-GIKYAKPSGQGYYEIENNNLKIG 173
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIG 236
V++VVN+ GN+ D L + E+ NTP TT+G
Sbjct: 174 VISVVNSIGNIYDEKGELLVGEE-----------TEEFK-----------INTP-GTTLG 210
Query: 237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
V+ ++ L+ + R+A +A +G + I+P + LDGDTVF +AT + VP
Sbjct: 211 VVITNSKLNNSDACRVASSAENGFSSVIKPYNLSLDGDTVFTIATNEMEVP 261
>gi|23061446|ref|ZP_00086291.1| COG3191: L-aminopeptidase/D-esterase [Pseudomonas fluorescens
PfO-1]
Length = 372
Score = 256 bits (656), Expect = 4e-67
Identities = 97/349 (27%), Positives = 136/349 (38%), Gaps = 41/349 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
+N+ITDV G+RVGH AS G GVT++ P G+ A C G
Sbjct: 20 LNAITDVPGVRVGHSNVRGRSAS-GRDICSGVTLIEPRAGSTNAQPCFAGVHVLNGNGDA 78
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVV----PIVPGAVIF 115
+R +A LL A+ + GV+R L E R D G + P+V
Sbjct: 79 TGLEWIR--EAGLLTSPIAFTNTHSLGVVRDALIELDRAQQPDDGRLYWNMPVVLETFDG 136
Query: 116 DL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL---QS 171
L + G++ +P + A G V G VG G G KGG+GTAS L Q
Sbjct: 137 LLNDINGFHVKPKHVAEAMSNAVDG-PVQEGAVGGGSGMICHEFKGGIGTASRRLSKAQG 195
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP- 230
G TVG + N G P + Q+ SP + P
Sbjct: 196 GWTVGAIVQANHGIRSELRVDGYPVGRY-----------------MEQVDSPFLRASLPH 238
Query: 231 --FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
+ + +A DA L P C R+A A GLART + GD A ATG +PP
Sbjct: 239 PGMGSIVVALATDAPLLPHQCTRLAQRASLGLART-GGGNEDHSGDIFIAFATGNGHIPP 297
Query: 289 EAGVPAALSPETQL-------VTAVGAAAADCLARAVLAGVLNAQPVAG 330
A S L ++ + AA + + A++ +L ++ G
Sbjct: 298 AAYEGKGASTCDGLRMVNNDHISELFLAATEAVEEAIINALLTSESTEG 346
>gi|423943|pir||A47039 nylon oligomer-degrading enzyme EIII nylC - Flavobacterium sp
Length = 355
Score = 236 bits (603), Expect = 6e-61
Identities = 95/327 (29%), Positives = 138/327 (42%), Gaps = 38/327 (11%)
Query: 6 DVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANS 65
D G+ +G + G TV+ P G AVD RGGA G +
Sbjct: 54 DFPGVSIGAAHYEEG--------PTGATVIHIPAGARTAVDARGGAVGL--------SGG 97
Query: 66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCR 125
F A+ LAGG+ YGL A GV L E + +V AVI+D ++ R
Sbjct: 98 YDFNHAICLAGGAGYGLEAGAGVSDALLER-LEHRTGFAELQLVSSAVIYD-----FSAR 151
Query: 126 PTADFGYSACAAAGVDVAV------GTVGVGVGARAGAL---KGGVGTASATLQSGVTVG 176
TA + A A ++ AV G G G+ A AG + + + A + V
Sbjct: 152 STAVYPDKALGRAALEFAVPGEFPQGRAGAGMSASAGKVDWDRTEITGQGAAFRRLGDVR 211
Query: 177 VLAVV--NAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
+LAVV N G +VD A + R P + A A+ P+ NTT
Sbjct: 212 ILAVVVPNPVGVIVDRAGTVVRGNYDAQTGVRRHPVFDYQEAFAEQVPPV---TEAGNTT 268
Query: 235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
I I + +SP + A H + R I+P HT +DGDT+FA+ T + +P G +
Sbjct: 269 ISAIVTNVRMSPVELNQFAKQVHSSMHRGIQPFHTDMDGDTLFAVTTDEIDLPTTPG--S 326
Query: 295 ALSPETQLVTAVGAAAADCLARAVLAG 321
+ + TA+GA A++ + AVL
Sbjct: 327 SRGRLSVNATALGAIASEVMWDAVLEA 353
>gi|15805808|ref|NP_294506.1| conserved hypothetical protein [Deinococcus radiodurans]
Length = 310
Score = 232 bits (593), Expect = 8e-60
Identities = 115/292 (39%), Positives = 144/292 (49%), Gaps = 38/292 (13%)
Query: 3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPP-PGTVGAVDCRGGAPGTRETDLLD 61
++T + G +VGH+ G TVVL P G V + G +P TRE LL
Sbjct: 17 TLTAIPGFQVGHWTD--------PLAQTGCTVVLCPPEGAVASASFIGPSPATREGVLLS 68
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
P V V ALLL GGSA+GLAAA GV+R LEE G G VPIVP AVI+DL VG
Sbjct: 69 PEKKVERVHALLLTGGSAFGLAAATGVVRVLEERGIGHETAFGRVPIVPAAVIYDLGVGN 128
Query: 122 WNCRPTADFGY-SACAAAGVDVAVGTVGVGVGARAGA----LKGGVGTASATLQSGVTVG 176
RP G +A AA+ V G VG G GA AG G + +SGV V
Sbjct: 129 PRVRPGEIEGEAAARAASSAPVERGQVGAGTGATAGKYLGGGVPGGLGSVCLERSGVRVA 188
Query: 177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF---NT 233
LAVVN G+V+D G+ + P+ A TP NT
Sbjct: 189 ALAVVNPVGDVLDERGGVLAGPG---------------------TGPVAAAFTPGDVENT 227
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVA 285
T+ +A + AL+ A CRR+A AA LAR I P+HT DGD+ F L++ A+
Sbjct: 228 TLVAVATEHALTKAECRRLADAAQTALARVIHPSHTAWDGDSAFVLSSAALP 279
>gi|26990549|ref|NP_745974.1| D-aminopeptidase putative [Pseudomonas putida KT2440]
gi|24985528|gb|AAN69438.1| D-aminopeptidase putative [Pseudomonas putida KT2440]
Length = 377
Score = 227 bits (580), Expect = 2e-58
Identities = 93/350 (26%), Positives = 132/350 (37%), Gaps = 44/350 (12%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
+N+ITDV G+RVGH A+ G GVT++ P G+ C G
Sbjct: 24 LNAITDVPGVRVGHSNVRGRTAN-GRDILTGVTIIEPRVGSTSQQPCFAGVHVLNGNGDA 82
Query: 61 DPANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVV----PIVPGAVIF 115
+R +A LL A+ + GV+R L R D G + P+V
Sbjct: 83 TGLEWIR--EAGLLTSPIAFTNTHSLGVVRDALIVLDREQQPDDGRIYWNMPVVLETYDG 140
Query: 116 DL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL---QS 171
L + G++ + + A G V G VG G G KGG+GTAS L Q
Sbjct: 141 LLNDINGFHVKHEHVAEALSNAVIG-PVIEGAVGGGSGMICHEFKGGIGTASRRLSSTQG 199
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP- 230
TVG + N G P + Q SP + P
Sbjct: 200 SWTVGAIVQANHGIRNELRVDGYPVGRY-----------------MEQADSPFLKASLPH 242
Query: 231 --FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
+ + +A DA L P C R+A A GLART + GD A +TG VPP
Sbjct: 243 PGMGSIVVCLATDAPLLPHQCTRLAQRASIGLART-GGGNEDHSGDIFIAFSTGN-HVPP 300
Query: 289 EAGVPAALSPETQLV--------TAVGAAAADCLARAVLAGVLNAQPVAG 330
A + +P T + + + AA + + A++ +L A G
Sbjct: 301 AA-YESKRAPTTDNLSMVNNDHISELFLAATEAVEEAIINALLAADTAEG 349
>gi|32041534|ref|ZP_00139117.1| COG3191: L-aminopeptidase/D-esterase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 366
Score = 177 bits (450), Expect = 3e-43
Identities = 85/296 (28%), Positives = 109/296 (36%), Gaps = 30/296 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N+ITDV G+RVGH G GVT+V P G C G
Sbjct: 19 NAITDVPGVRVGHSTLNQR--IDGRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNGDAT 76
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGV---VPIVPGAVIFDL 117
+R +A LL A + G +R L R DSG+ +P+V L
Sbjct: 77 GLEWIR--EAGLLTTPIAITNTHSVGAVRDALIAEERAELGDSGLYWCMPVVMETFDGLL 134
Query: 118 -PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL---QSGV 173
+ G + ACA +G V G+VG G G KGG+G+AS L Q G
Sbjct: 135 NDIWGQHVGARQVGEALACAESG-PVREGSVGGGTGMICHEFKGGIGSASRRLPAEQGGW 193
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT 233
TVG L N G P VG P +
Sbjct: 194 TVGALVQANHGQRRELRVDGYP-----VGRRLGDIPSPFSEEG-----------TPGMGS 237
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
+ ++A DA L P C+R+A A G+ART GD A ATG +PP
Sbjct: 238 IVVILATDAPLLPHQCQRLAQRASIGIART-GGGTEDSSGDVFLAFATGNQDLPPA 292
>gi|15596683|ref|NP_250177.1| hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11349220|pir||G83460 hypothetical protein PA1486 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gi|9947440|gb|AAG04875.1| hypothetical protein PA1486 [Pseudomonas aeruginosa PAO1]
Length = 366
Score = 177 bits (449), Expect = 4e-43
Identities = 85/296 (28%), Positives = 109/296 (36%), Gaps = 30/296 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N+ITDV G+RVGH G GVT+V P G C G
Sbjct: 19 NAITDVPGVRVGHSTLNQR--IDGRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNGDAT 76
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGV---VPIVPGAVIFDL 117
+R +A LL A + G +R L R DSG+ +P+V L
Sbjct: 77 GLEWIR--EAGLLTTPIAITNTHSVGAVRDALIAEERAELGDSGLYWCMPVVMETFDGLL 134
Query: 118 -PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL---QSGV 173
+ G + ACA +G V G+VG G G KGG+G+AS L Q G
Sbjct: 135 NDIWGQHVGARQVGEALACAESG-PVREGSVGGGTGMICHEFKGGIGSASRRLPAEQGGW 193
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT 233
TVG L N G P VG P +
Sbjct: 194 TVGALVQANHGQRRELRVDGYP-----VGRRLGDIPSPFSEEG-----------TPGMGS 237
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
+ ++A DA L P C+R+A A G+ART GD A ATG +PP
Sbjct: 238 IVVILATDAPLLPHQCQRLAQRASIGIART-GGGTEDSSGDVFLAFATGNQDLPPA 292
>gi|38103362|gb|EAA50063.1| hypothetical protein MG03822.4 [Magnaporthe grisea 70-15]
Length = 395
Score = 133 bits (337), Expect = 4e-30
Identities = 85/361 (23%), Positives = 129/361 (35%), Gaps = 45/361 (12%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
NS+TDV G+ V + S G T +LP C G +
Sbjct: 32 NSLTDVPGVLV----HTETIRSADGQVNTGATTILPRKDWFRDA-CHAGVFRFNGAGEMT 86
Query: 62 PANSVRFVDALLLAGGSAYGL-----AAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIF- 115
+ + + LLA A GV+ + EH R ++P+V
Sbjct: 87 GCHWLE--ETGLLASPIVITNSFSVGDAYRGVLDYAVEHNRAHGTKWFMLPVVAETFDGF 144
Query: 116 --DLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
DL + +P S +A+ V G VG G G KGG G++S + GV
Sbjct: 145 MNDLYR--FAVKPEHIA-QSIRSASSAPVPEGNVGGGTGMLCQGFKGGTGSSSRLVP-GV 200
Query: 174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF-- 231
+ AAG+ T A + + + ++ + +
Sbjct: 201 KLSA-----AAGDGKTKETSWTVAALVQANYGQLHHLHFAGVPVGRIMAEQRRADEATAA 255
Query: 232 -------------NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
+ I V+A DA L+P C+R+A A GLAR H L GD A
Sbjct: 256 ADRAYAEAKDDKDGSIIVVVATDAPLNPLQCQRLARRATAGLARVGGYGHN-LSGDIFLA 314
Query: 279 LATG-AVAVPPEAGVP----AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
+TG +V V E G P A S + + A+ AAAD A+ + A+ + G
Sbjct: 315 FSTGSSVVVQTEGGQPAQEIAGSSIDDNTINALFEAAADATQEAIYNALCMAETMTGFEG 374
Query: 334 Y 334
+
Sbjct: 375 H 375
>gi|16119469|ref|NP_396175.1| AGR_pAT_343p [Agrobacterium tumefaciens]
gi|17938827|ref|NP_535615.1| aminopeptidase [Agrobacterium tumefaciens str. C58 (U. Washington)]
gi|25521856|pir||AE3189 aminopeptidase Atu5242 [imported] - Agrobacterium tumefaciens
(strain C58, Dupont) plasmid AT
gi|15162009|gb|AAK90616.1| AGR_pAT_343p [Agrobacterium tumefaciens str. C58 (Cereon)]
gi|17743680|gb|AAL45931.1| aminopeptidase [Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 384
Score = 128 bits (324), Expect = 1e-28
Identities = 79/361 (21%), Positives = 122/361 (33%), Gaps = 43/361 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWA--CGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
+N+ITD+ GI VG + G GVT +LP V G
Sbjct: 27 LNAITDIAGIHVGVSTIREEVPRPGRKLPVRTGVTAILPHATASEPVPVFAGIHRFNGNG 86
Query: 59 LLDPANSVR----FVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSG---VVPIVPG 111
+ ++ + FV +L+ + G+A RW+ + ++P+V
Sbjct: 87 EMTGSHWIDDGGYFVGPVLITNTHSVGIAHHSA-ARWMIDRYSATYEGDEQLWIMPVVAE 145
Query: 112 AVIFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
L + G + F A G VA G+VG G G A KGG GTAS +
Sbjct: 146 TYDGLLNDINGQHVTVDHVFEALNGANTG-PVAEGSVGGGTGMIAYGFKGGTGTASRRIA 204
Query: 171 SGV---TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF 227
G TV L N GLP L +
Sbjct: 205 VGGEEFTVAALVQANHGQRDWLSIGGLPVGKLLQQTD------PDLSER----------- 247
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLAR--TIRPAHTPLDGDTVFALATGAVA 285
+ I VIA D L+P +++A G+ R T+ +++ GD A +T
Sbjct: 248 ----GSIIVVIATDVPLAPHQLQKLARRGAIGIGRNGTVGGSNS---GDIFLAFSTANPH 300
Query: 286 VPPEAGVPAA--LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFG 343
P + ++ V A + AV+ ++ A+ G P R G
Sbjct: 301 PMRHKAGPLLSIVMVNDDVLDPVYQAVVQSVEEAVVNAMIAAETTGGTPYDRYRIEAIDG 360
Query: 344 S 344
+
Sbjct: 361 N 361
>gi|14590032|ref|NP_142096.1| D-aminopeptidase [Pyrococcus horikoshii]
gi|7520999|pir||D71227 probable D-aminopeptidase - Pyrococcus horikoshii
gi|3256464|dbj|BAA29147.1| 361aa long hypothetical D-aminopeptidase [Pyrococcus horikoshii]
Length = 361
Score = 128 bits (323), Expect = 2e-28
Identities = 81/344 (23%), Positives = 129/344 (37%), Gaps = 42/344 (12%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAG---WACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N ITDV G++VGH + L G GVT +LP G + GA
Sbjct: 19 NKITDVKGVKVGHVTLIKGKGKLIPGKGPVRTGVTAILPHEGNIYKEKVLAGAFVMNGYS 78
Query: 59 LLDPANSVRFVD------ALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPG 111
P ++ + ++L + G A +G++ ++ E + + +G V P+V
Sbjct: 79 --KPVGLIQLWELGTIETPIILTNTLSIG-TAVEGLLDYILEENEDIGVTTGSVNPLVLE 135
Query: 112 AVI-FDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL- 169
+ + G + + + A A D G VG G G A KGG+G+AS +
Sbjct: 136 CNDSYLNDIRGRHVK--REHVVEAIKRADEDFEEGAVGAGTGMSAFEFKGGIGSASRIVE 193
Query: 170 --QSGVTVGVLAVVNAAGNVVDPA-TGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
TVG L + N G D G+P +L
Sbjct: 194 IEGKKYTVGALVLSN-FGRREDLTIAGVPVGLELKNWPGRGG------------------ 234
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV 286
+ I +IA DA L+ R+A A GLART GD A +T
Sbjct: 235 --EGKGSIIMIIATDAPLTGRQLNRVAKRAIVGLART-GGYAYNGSGDIAVAFSTANRIK 291
Query: 287 PPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E V + +++ + A A+ + A++ +L A+ + G
Sbjct: 292 HYEKEVIEIKALPDSVISPLFKATAEAVEEAIINSLLEARTMDG 335
>gi|18978296|ref|NP_579653.1| d-aminopeptidase [Pyrococcus furiosus DSM 3638]
gi|18894120|gb|AAL82048.1| d-aminopeptidase [Pyrococcus furiosus DSM 3638]
Length = 361
Score = 125 bits (315), Expect = 1e-27
Identities = 81/344 (23%), Positives = 130/344 (37%), Gaps = 42/344 (12%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAG---WACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
NSI+DV G++VGH + L G GVT +LP G + GA
Sbjct: 19 NSISDVKGVKVGHVTLIKGRGKLIPGKGPVRTGVTAILPHDGNIYKEKVLAGAFVMNGYS 78
Query: 59 LLDPANSVRFVD------ALLLAGGSAYGLAAADGVMRWL--EEHRRGVAMDSGVVPIVP 110
P V+ + ++L + G A DG++ ++ E GV S V P+V
Sbjct: 79 --KPVGLVQLWELGTIETPIILTNTLSIG-TAIDGLLDYVLRENEDIGVTTGS-VNPLVL 134
Query: 111 GAVI-FDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL 169
+ + G + + + A +A D G VG G G A KGG+G++S +
Sbjct: 135 ECNDSYLNDIRGRHVK--REHVVEAIESASKDFEEGAVGAGTGMSAFEFKGGIGSSSRIV 192
Query: 170 ---QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
TVG L + N G+P +L
Sbjct: 193 EVEGKKYTVGALVLSNFGKREDLTIAGVPVGLELKDWPGRGG------------------ 234
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV 286
+ + I ++A DA L+ R+A A GLART GD V A +T
Sbjct: 235 --SGKGSIIMIVATDAPLTARQLNRLAKRAVVGLART-GGYAYNGSGDVVVAFSTANKIK 291
Query: 287 PPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E + + +++ + A A+ + A++ +L A+ + G
Sbjct: 292 HYEKQEISIRALPDSVLSPIFKATAEAVEEAIINSLLQAKTMDG 335
>gi|14520302|ref|NP_125777.1| d-aminopeptidase. [Pyrococcus abyssi]
gi|7514726|pir||A75195 d-aminopeptidase. PAB0045 - Pyrococcus abyssi (strain Orsay)
gi|5457517|emb|CAB49008.1| D-aminopeptidase (EC 3.4.11.19) [Pyrococcus abyssi]
Length = 361
Score = 123 bits (310), Expect = 5e-27
Identities = 83/344 (24%), Positives = 129/344 (37%), Gaps = 42/344 (12%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAG---WACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N I+DV G++VGH + L G GVTV+LP G + GGA
Sbjct: 19 NKISDVKGVKVGHVTLIRGKGKLIPGKGPVRTGVTVILPHEGNIYKEKVLGGAFVMNGYS 78
Query: 59 LLDPANSVRFVD------ALLLAGGSAYGLAAADGVMRWL--EEHRRGVAMDSGVVPIVP 110
P V+ + ++L + G A DG++ ++ E GV S V P+V
Sbjct: 79 --KPVGLVQLWELGTIETPIVLTNTLSIG-TAVDGLLDYVLSENEDIGVTTGS-VNPLVL 134
Query: 111 GAVI-FDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL 169
+ + G + + + A A D G VG G G A KGG+G++S +
Sbjct: 135 ECNDSYLNDIRGRHVK--REHVVEAIKNAKEDFEEGAVGSGTGMSAFEFKGGIGSSSRIV 192
Query: 170 ---QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
T+G L + N G+P +L
Sbjct: 193 KIEGRSYTIGALVMTNFGKREDLTIAGVPVGLELKHWPGRGGD----------------- 235
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV 286
+ I +IA DA L+ R+A A GLART GD A +T
Sbjct: 236 ---GKGSIIMIIATDAPLTSRQLNRLAKRAVVGLART-GGYAYNGSGDIAVAFSTANKIK 291
Query: 287 PPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E + + L++ + AAA+ + A++ +L A+ + G
Sbjct: 292 HYEKDIMEIKALPDSLLSPLFKAAAEAVEEAIINSLLEAKTMDG 335
>gi|37526171|ref|NP_929515.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785601|emb|CAE14551.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 397
Score = 121 bits (304), Expect = 3e-26
Identities = 70/344 (20%), Positives = 119/344 (34%), Gaps = 35/344 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAG---WACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N+ITDV G+ VG+ ++ D L G GVT +LP
Sbjct: 41 NAITDVSGVEVGYSTIIEGDGKLEVGKGPIRTGVTAILPKGKKFS--PVFSSTFSLNGNG 98
Query: 59 LLDPANSVRFVDALLLAGGSAYGLAAADGVMR-----WLEEHRRGVAMDSGV---VPIVP 110
+ V+ ++ L + G++R W+ ++ + + +P+V
Sbjct: 99 DMTGNQWVK--ESGFLETPILITNTHSVGIVRDSTISWMIDNNLTSPLKDDLFWLLPVVA 156
Query: 111 GAVIFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL 169
L + G + + + ++ +A + G VG G G KGG GT+S L
Sbjct: 157 ETWDGILNDINGMHVKKEHVY-HALNSAKSGAIEEGNVGGGTGMNLFKFKGGTGTSSRIL 215
Query: 170 Q---SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
G TVGVL GN D + P ++I L +
Sbjct: 216 DKKDGGYTVGVLVQ----GNFGDRDDLIIAG----------IPVGKEIQDLKPIYHGGKK 261
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV 286
+ I V+A DA L+P +IA GLA+ + G+ A +T
Sbjct: 262 KIKDAGSIIAVVATDAPLAPHQLEKIAKRVSLGLAK-VGGVARNTSGEIFIAFSTANNDA 320
Query: 287 PPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
V + + A A++ ++ A+ + G
Sbjct: 321 FSRKDVRTIKILSNDKLDPLYEATISATEEAIINAMIAAKKMVG 364
>gi|5821800|pdb|1B65|A Chain A, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821801|pdb|1B65|B Chain B, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821802|pdb|1B65|C Chain C, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821803|pdb|1B65|D Chain D, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821804|pdb|1B65|E Chain E, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|5821805|pdb|1B65|F Chain F, Structure Of L-Aminopeptidase D-Ala-EsteraseAMIDASE FROM
Ochrobactrum Anthropi, A Prototype For The Serine
Aminopeptidases, Reveals A New Variant Among The Ntn
Hydrolase Fold
gi|1310704|emb|CAA66259.1| D-aminopeptidase [Ochrobactrum anthropi]
Length = 375
Score = 116 bits (292), Expect = 6e-25
Identities = 77/349 (22%), Positives = 116/349 (33%), Gaps = 43/349 (12%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWA--CGVTVVLPPPGTVGAVDCRGGAPGTRETDL 59
N+ITDV G+ VG ++ + G GVT +LP + V G
Sbjct: 27 NAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGE 86
Query: 60 LDPANSVRFVDALLLAGGSAYGLAAADGV-----MRWLEEH-RRGVAMDSGV--VPIVPG 111
+ + + D G G+ +RW+ + D + +P+V
Sbjct: 87 MTGTHWIE--DGGYFLGPVVITNTHGIGMAHHATVRWMVDRYASTYQTDDFLWIMPVVAE 144
Query: 112 AVIFDL-PVGGWNCRPTADFGYSACAA-AGVDVAVGTVGVGVGARAGALKGGVGTASATL 169
L + G+ T A A V G G G G KGG GTAS +
Sbjct: 145 TYDGALNDINGFPV--TEADVRKALDNVASGPVQEGNCGGGTGMITYGFKGGTGTASRVV 202
Query: 170 QSGV---TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
+ G T+G L N G+P P ++
Sbjct: 203 EFGGRSFTIGALVQANHGQRDWLTIAGVPVG----QHMRDGTPQSQLQER---------- 248
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV 286
+ I V+A D L P +R+A A G+ R P GD A +T
Sbjct: 249 -----GSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNS-GDIFIAFSTAN-QR 301
Query: 287 PPEAGVPAALSPETQL---VTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
P + L E + V AA D + AV+ ++ A+ + G P
Sbjct: 302 PMQHRSAPFLDVEMVNDEPLDTVYLAAVDSVEEAVVNAMIAAEDMGGTP 350
>gi|20807555|ref|NP_622726.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
gi|20516090|gb|AAM24330.1| L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
Length = 364
Score = 108 bits (271), Expect = 2e-22
Identities = 73/296 (24%), Positives = 114/296 (38%), Gaps = 32/296 (10%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAG---WACGVTVVLPPPGTVGA----VDCRGGAPG 53
+N+ITDV G+ VGH + + L G GVT ++P G + C G
Sbjct: 20 LNAITDVEGVTVGHVTLISGEGKLIPGKGPVRTGVTAIVPHSGNIFKEKLIASCYVGNGF 79
Query: 54 TRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGA 112
+ L+ ++L + G AADG++ ++ + + +G V P+V
Sbjct: 80 GKSIGLIQVKELGTLETPIILTNTLSVG-TAADGLIEYMLSFNEDIGITTGTVNPVVLEC 138
Query: 113 VIFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
L + G + + +A +A + G+VG G G KGG+GTAS ++
Sbjct: 139 NDGYLNDIRGRHVKKEHVI--AAIKSAKNEFETGSVGAGTGMICHGFKGGIGTASRRIEI 196
Query: 172 G---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
G TVGVL + N G + D G+ R ++ A
Sbjct: 197 GGKVYTVGVLLLTN-YGRMED--------LIFNGKNVGRM-------LKEEIKKGKEAAK 240
Query: 229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
+ I VIA DA + R+A GLA+T GD A +T
Sbjct: 241 EDQGSCIIVIATDAPMDAHGLERVAKRGVLGLAKT-GSFMGNGSGDIAIAFSTANK 295
>gi|13475743|ref|NP_107310.1| D-aminopeptidase [Mesorhizobium loti]
gi|14026499|dbj|BAB53096.1| D-aminopeptidase [Mesorhizobium loti]
Length = 378
Score = 102 bits (256), Expect = 1e-20
Identities = 67/307 (21%), Positives = 98/307 (31%), Gaps = 36/307 (11%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAG---WACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
N+ITD+ G+ VG+ + D L G GVT +LP P A+ G
Sbjct: 32 NAITDLPGVAVGYATLISGDGPLIVGKGPVRTGVTAILPRPLADLAIPVFAGIFSQNGNG 91
Query: 59 LLDPANSVRFVDALLLAGGSAYGLAAADGVMR--WLEEHRRGVAMDSGV---VPIVPGAV 113
L ++ + A + GV R L +R + +P+
Sbjct: 92 ELTGSHIIEETGAFNF--PITITNTHSCGVSRDGTLRWMQRVLPTAVDSAWGLPVAAETY 149
Query: 114 I-FDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL--- 169
F + G + A G + G+VG G G K G GTAS +
Sbjct: 150 DGFLNDINGHHLTFDHVAQALD-DATGGPIEEGSVGGGTGMITFGFKAGSGTASRIVGWQ 208
Query: 170 QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
+ TVG N + L L P + A+
Sbjct: 209 GNSYTVGAFVQSN------FGKRRNFTLRGLRAGSELTEPAIREGTPRAEK--------- 253
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPE 289
+ I V+A DA P +R+A G+A T GD A +T P
Sbjct: 254 --GSIIAVVATDAPFLPHQMKRLARRVPLGVAMT-GGFGYHSSGDIFLAFSTAN---PAA 307
Query: 290 AGVPAAL 296
A P+
Sbjct: 308 ALAPSGR 314
>gi|22975947|ref|ZP_00021868.1| COG3191: L-aminopeptidase/D-esterase [Ralstonia metallidurans]
Length = 352
Score = 98.8 bits (246), Expect = 1e-19
Identities = 86/340 (25%), Positives = 122/340 (35%), Gaps = 45/340 (13%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N+ITDV G+ VGH D GVTV+ P G V A
Sbjct: 29 NAITDVAGVTVGHCTLADG------ACQTGVTVIRPHAGNVYREKVPAAATVLNGFG--K 80
Query: 62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLE---------EHRRGVAMDSGVVPIVPGA 112
V+ + ++ A + G + + E R V P+V
Sbjct: 81 SIGLVQVDELGVMETPIALTNTFSVGALAQAQIRAAIAENPEIGRAWP---TVNPLVFEC 137
Query: 113 VIFDLPVGGWNCRPTADFGY-SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
D + Y SA AAA VDVA G VG G G + +KGG+GTAS
Sbjct: 138 --NDGYLNDIQAMAVQGMHYDSALAAASVDVAQGAVGAGRGMSSFGVKGGIGTASRI-AG 194
Query: 172 GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF 231
G TVG L + N G A L G+ P +
Sbjct: 195 GYTVGALVLSNFGTPDSLIYGGRLLGAALAGQLRQEIVPEK------------------- 235
Query: 232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEA 290
+ I ++A DA L R+++ A GLART GD A +T V +
Sbjct: 236 GSIIMIVATDAPLDARQLGRLSLRAGAGLART-GSVFGHGSGDIALAFSTAYTVPHLADV 294
Query: 291 GVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
+PA + + AAAD + +A++ + + + V G
Sbjct: 295 PMPAVQMVHETRLDPLFRAAADSVEQAIVNALWHGETVHG 334
>gi|13472247|ref|NP_103814.1| probable D-aminopeptidase [Mesorhizobium loti]
gi|14022992|dbj|BAB49600.1| probable D-aminopeptidase [Mesorhizobium loti]
Length = 343
Score = 93.8 bits (233), Expect = 4e-18
Identities = 77/339 (22%), Positives = 117/339 (34%), Gaps = 44/339 (12%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N+ITDV G+RVGH + D GVT +LP G + +
Sbjct: 21 NAITDVPGVRVGHCTLRNGD------INTGVTAILPHGGNLFRKKVTAASHVINGFGKTI 74
Query: 62 PANSVRFVDAL----LLAGGSAYGLAAADGVMRWLEEH-RRGVAMDSGVVPIVPGAVIFD 116
V+ + ++ LL + G A + + ++ G V P+V
Sbjct: 75 GLTQVQELGSIETPVLLTNTLSVGTCATTLIRDAIRQNPDIG-RTTGTVNPLVGECNDGP 133
Query: 117 LPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASAT--LQSGVT 174
L + A +V G VG G G KGG+G+AS L G
Sbjct: 134 LNDIQALAISEEHALAALADAHEGEVEQGNVGAGTGMTCFGFKGGIGSASRRIALGGGHH 193
Query: 175 VGVLAVVNAA--GNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
+GVL + N G++V P P G+
Sbjct: 194 LGVLVLSNFGRPGDLVLPDGRRPTSGQPAGDER--------------------------G 227
Query: 233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA-VAVPPEAG 291
+ + V+A D L R+A A G+AR + GD A +TG V
Sbjct: 228 SVMIVLATDLPLEHRQLERVARRAGAGIAR-LGSFWGHGSGDIAIAFSTGNLVDHDESRD 286
Query: 292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
+ L+ + + AAA+ AVL +L+A+ G
Sbjct: 287 LVPLLALNEARIDILFRAAAEATQEAVLNSMLSAEAFTG 325
>gi|23036948|ref|ZP_00069168.1| COG3191: L-aminopeptidase/D-esterase [Oenococcus oeni MCW]
gi|23038491|ref|ZP_00070631.1| COG3191: L-aminopeptidase/D-esterase [Oenococcus oeni MCW]
Length = 369
Score = 90.7 bits (225), Expect = 3e-17
Identities = 69/298 (23%), Positives = 113/298 (37%), Gaps = 48/298 (16%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV------GA---VDCRGGAP 52
N ITDV G+ VG + GVT +LP PG V A ++ G +
Sbjct: 20 NLITDVDGVEVGQITIDQ------DDFHSGVTAILPHPGNVFKRKVPAASYVINGFGKSV 73
Query: 53 GTRETDLLDPANSVRFVDALLLAGGSAYGLAAA-DGVMRWLEEHRRGVAMDSGVV-PIVP 110
G + D L + ++L + +G+ A + + +++ + + + V PIV
Sbjct: 74 GLIQIDELGTIET-----PIVLT--NTFGVGTAINALTKYMLKQNPEIGDTTSTVNPIVA 126
Query: 111 GAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL- 169
++ + T SA AA + G VG G G LKGG+G++S +
Sbjct: 127 ECNDGNISNIR-AMKITESDVSSALNAAKDTLEEGAVGGGRGMVCYGLKGGIGSSSRIVK 185
Query: 170 ---QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
T+G L + N + F + P + A +S
Sbjct: 186 VDDDHTYTLGALVMTN---------------YGFLDNFIVNGIPIGKSLAEMLVSDKQK- 229
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
+ I V+A DA L+ +R+A A G+ RT G+ VFA +T +
Sbjct: 230 --EEKGSIITVLATDAPLNSRQLKRLAKRATVGINRT-GGYIGNGSGEIVFAFSTSNL 284
>gi|23098305|ref|NP_691771.1| D-aminopeptidase [Oceanobacillus iheyensis HTE831]
gi|22776531|dbj|BAC12806.1| D-aminopeptidase [Oceanobacillus iheyensis HTE831]
Length = 328
Score = 90.0 bits (223), Expect = 6e-17
Identities = 69/350 (19%), Positives = 112/350 (32%), Gaps = 52/350 (14%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
+ ITDV G++VGH + + GVT +LP PG + G
Sbjct: 9 DCITDVHGVQVGHTTLYE-KINEKDTICTGVTAILPHPGNLFRQKVIAGCSVINGFGKTT 67
Query: 62 PANSVRFVDALLLAGGSAYGLAAA-----DGVMRWLEEHRRGVAMDSGVVPIVPGAVIFD 116
V+ + L+ + G + ++ + +G + ++ G
Sbjct: 68 G--LVQLNELGLIESPIMLTNTLSIAPVMQGTLTYMLNRTEEIGDTTGTINLIVGECNDS 125
Query: 117 LPVGGWNCRPTADFGYSACAA----AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG 172
+ R A A A + G VG G G + KGG+GTAS +Q
Sbjct: 126 YLN---SIRLQAITPSHAIKAIESASNESSEEGAVGAGTGMQCFGYKGGIGTASRLIQVE 182
Query: 173 ---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
T+G L V N + FA T
Sbjct: 183 DVIYTLGGLVVSN-------------YGNRKQATFA---------------DWEHTGQET 214
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPL-DGDTVFALATGA---VA 285
P + + ++A DA LS RIA GL RT + GD A +T
Sbjct: 215 PDGSIMMILATDAPLSDRQLNRIAKRCAAGLGRT--GSALDHGSGDIAIAFSTANQVSHD 272
Query: 286 VPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYR 335
A L + ++ + A + + V+ + A+ G ++
Sbjct: 273 SKNHLMSAAYLRDDHPVMNQLFQAVVEVIESCVIHSLQKAKTTLGRSGHK 322
>gi|23500278|ref|NP_699718.1| D-aminopeptidase, putative [Brucella suis 1330]
gi|23463886|gb|AAN33723.1| D-aminopeptidase, putative [Brucella suis 1330]
Length = 340
Score = 86.5 bits (214), Expect = 7e-16
Identities = 71/294 (24%), Positives = 102/294 (34%), Gaps = 51/294 (17%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV------GAVDCRGGAPGTR 55
N+ITDV G++VGH+ D + GVT ++P G + A D G +
Sbjct: 21 NAITDVPGVQVGHHTLRDGN------INTGVTAIIPHGGNLYRRKVLAACDIINGF--GK 72
Query: 56 ETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLE-EHRRGVAMDSGVVPIVPGAVI 114
T L+ +LL G A + + G + V P+V
Sbjct: 73 STGLVQIEELGSLETPILLTNTFGVGTCANALIRDAIAANPDIG-RATATVNPVVLECND 131
Query: 115 FDLPVGGWNCRP-TADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
L T + A +A V+V G VG G G KGG+GT+S +
Sbjct: 132 GPL--NDIQAMAVTEEHARLALRSAQVNVPQGNVGAGTGMTCFGFKGGIGTSSRRFEFDG 189
Query: 174 T---VGVLAVVN--AAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
+G+LA+ N AG++V P P SP
Sbjct: 190 KLHHLGILALTNFGRAGDLVLPDGRRP--------------------------SPKAETQ 223
Query: 229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG 282
+ I V+A D AL +R+ GLAR + GD TG
Sbjct: 224 PEKGSVILVLATDVALEHRQLKRVTRRCGAGLAR-LGAFWGHGSGDIAIGFTTG 276
>gi|17989086|ref|NP_541719.1| D-AMINOPEPTIDASE [Brucella melitensis]
gi|25529150|pir||AD3602 D-stereospecific aminopeptidase (EC 3.4.11.19) [imported] -
Brucella melitensis (strain 16M)
gi|17984931|gb|AAL53983.1| D-AMINOPEPTIDASE [Brucella melitensis 16M]
Length = 340
Score = 86.1 bits (213), Expect = 8e-16
Identities = 71/294 (24%), Positives = 102/294 (34%), Gaps = 51/294 (17%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV------GAVDCRGGAPGTR 55
N+ITDV G++VGH+ D + GVT ++P G + A D G +
Sbjct: 21 NAITDVPGVQVGHHTLRDGN------INTGVTAIIPHGGNLYRRKVLAACDIINGF--GK 72
Query: 56 ETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLE-EHRRGVAMDSGVVPIVPGAVI 114
T L+ +LL G A + + G + V P+V
Sbjct: 73 STGLVQIEELGSLETPILLTNTFGVGTCANALIRDAIAANPDIG-RATATVNPVVLECND 131
Query: 115 FDLPVGGWNCRP-TADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
L T + A +A V+V G VG G G KGG+GT+S +
Sbjct: 132 GPL--NDIQAMAVTEEHARLALRSAQVNVPQGNVGAGTGMTCFGFKGGIGTSSRRFEFDG 189
Query: 174 T---VGVLAVVN--AAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
+G+LA+ N AG++V P P SP
Sbjct: 190 KLHHLGILALTNFGRAGDLVLPDGRRP--------------------------SPKAETQ 223
Query: 229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG 282
+ I V+A D AL +R+ GLAR + GD TG
Sbjct: 224 PEKGSVILVLATDVALEHRQLKRVTRRCGAGLAR-LGAFWGHGSGDIAIGFTTG 276
>gi|23009700|ref|ZP_00050653.1| COG3191: L-aminopeptidase/D-esterase [Magnetospirillum
magnetotacticum]
Length = 106
Score = 86.1 bits (213), Expect = 9e-16
Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 12/109 (11%)
Query: 234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVP 293
T+ V+A DAAL+ A +R+A+ A DGLAR I PAHTPLDGD VFA+ATGAV +
Sbjct: 7 TLAVVATDAALTKAQAKRLAVVAQDGLARAIHPAHTPLDGDVVFAVATGAVPL------- 59
Query: 294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRDMFPG 340
+ + +GAAAA+ LARAV GV +A P +P +R++
Sbjct: 60 ---ADPITDLARLGAAAAETLARAVALGVHSATRLPCLDLPAWRELHGR 105
>gi|22984022|ref|ZP_00029183.1| COG3191: L-aminopeptidase/D-esterase [Burkholderia fungorum]
Length = 536
Score = 84.2 bits (208), Expect = 3e-15
Identities = 85/349 (24%), Positives = 115/349 (32%), Gaps = 35/349 (10%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
+I DV G+ VGH + GVTV+ P G A
Sbjct: 193 GTIADVHGVTVGHCTLDEG------AVQTGVTVIRPHDGDPFLDKVPAAASVINGFG--K 244
Query: 62 PANSVRFVDALLLAGGSAYGLA---------AADGVMRWLEEHRRGVAMDSGVVPIVPGA 112
V+ + L A +R + R V P+V
Sbjct: 245 SIGLVQVEELGTLETPIALTNTFSVAAAAQAQIRAAVRANPQIGR---EWPTVNPLVFEC 301
Query: 113 VIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL--- 169
L TA A AAAG DVA G+VG G G LKGG+G AS +
Sbjct: 302 NDGYL-NDIQALAVTARHFDDAYAAAGPDVAGGSVGAGRGMSCFDLKGGIGNASRVVSAA 360
Query: 170 QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
TVG L + N G M + G RA A A
Sbjct: 361 GRSYTVGALVLAN---------FGRLPMLTIDGMPLGRALAERADNAEAAALLSATPATQ 411
Query: 230 PF-NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
P + I ++A DA L RR+++ A GLART + GD A +T
Sbjct: 412 PEQGSIIMIVATDAPLDARQLRRLSLRAAAGLART-GSVYGHGSGDIALAFSTAYTVPHG 470
Query: 289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
V + + + A AD + +A+L + A V G R +
Sbjct: 471 ADFVTLPPLVADERLDPLFRACADSVEQAILDALWRAASVTGRAGRRRL 519
>gi|16262501|ref|NP_435294.1| putative D-aminopeptidase [Sinorhizobium meliloti]
gi|25505585|pir||H95267 probable D-aminopeptidase [imported] - Sinorhizobium meliloti
(strain 1021) magaplasmid pSymA
gi|14523107|gb|AAK64706.1| putative D-aminopeptidase [Sinorhizobium meliloti]
Length = 345
Score = 83.0 bits (205), Expect = 7e-15
Identities = 82/340 (24%), Positives = 109/340 (32%), Gaps = 55/340 (16%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
N+ITDV G+ VGH G G GVT +LP G V V R
Sbjct: 21 NAITDVAGVSVGHRSLR------GEGLFTGVTAILPHAGDVFRVKPRAAVEVINGFGKSA 74
Query: 62 PANSVRFVDAL----LLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDL 117
V + + +L + +G+AA L G A++ +
Sbjct: 75 GLMQVAEIGTIETPIVLT--NTFGVAACT---EALVRRAISANPAIGRKTSTVNALVCEC 129
Query: 118 PVGG------WNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
G P A G V G VG G G A K G+GTAS ++
Sbjct: 130 NDGSINDIQALAVTPADAEAALDAARTG-PVEQGAVGAGSGMTAFGFKAGIGTASRRMRV 188
Query: 172 G---VTVGVLAVVN--AAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
G T+G L + N AAG++V P P P
Sbjct: 189 GKRDFTLGTLVLANFGAAGDLVLPDGRRP--------------------------DPRVP 222
Query: 227 FNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALAT-GAVA 285
+ I V+A D L+ +R+A A GLAR + GD T V
Sbjct: 223 AGPERGSVIVVMATDLPLADRQLQRVARRAGAGLAR-LGAFWGHGSGDVALCFTTADPVE 281
Query: 286 VPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNA 325
P + AAAD AVL + A
Sbjct: 282 HEPATAFTTQERLADGHIDIAFRAAADTTQEAVLNALCMA 321
>gi|17546102|ref|NP_519504.1| PROBABLE D-AMINOPEPTIDASE PROTEIN [Ralstonia solanacearum]
gi|17428398|emb|CAD15085.1| PROBABLE D-AMINOPEPTIDASE PROTEIN [Ralstonia solanacearum]
Length = 341
Score = 81.1 bits (200), Expect = 3e-14
Identities = 96/344 (27%), Positives = 131/344 (38%), Gaps = 47/344 (13%)
Query: 2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG---------TVGAVDCRGGAP 52
NSITDV GI VGH G GVTVV P G ++ G +
Sbjct: 17 NSITDVAGITVGHATLA------GGSIQTGVTVVRPHAGDPFLDKVPAACAVLNGFGKSV 70
Query: 53 GTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGA 112
G + + L + + L A G A V + +E H + V P+V
Sbjct: 71 GLLQVEELGVLET-----PIALTNTFAVGDVARAQVQQAVEAHPQIGRAWPTVNPLVFEC 125
Query: 113 VIFDLPV-GGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASAT--L 169
L + R Y+AC AAG A G VG G G A +KGG+G+AS L
Sbjct: 126 NDGYLNDLQSFAVRDLHY--YAACLAAGGAFAQGAVGAGRGMSAFGVKGGLGSASRVVAL 183
Query: 170 QSGV--TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF 227
+ G TVG L + N G AD+ A AP E+
Sbjct: 184 EDGTRRTVGALVLANFGVTANLTLAGRRIGADIARVLAEDAPGPEK-------------- 229
Query: 228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAV 286
+ I ++A DA L RR+A+ A GLART GD A +T V
Sbjct: 230 ----GSIIMLLATDAPLDARQLRRVALRAGAGLART-GSVFGHGSGDIALAFSTAYTVPH 284
Query: 287 PPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
+PA + + AAAD + +A++ + A+ V G
Sbjct: 285 LGARPMPAVAMTHETHLDPLFQAAADSVEQAIVHALFYAETVTG 328
>gi|33593381|ref|NP_881025.1| probable D-aminopeptidase [Bordetella pertussis Tohama I]
gi|33602684|ref|NP_890244.1| probable D-aminopeptidase [Bordetella bronchiseptica RB50]
gi|33572737|emb|CAE42664.1| probable D-aminopeptidase [Bordetella pertussis]
gi|33577126|emb|CAE35683.1| probable D-aminopeptidase [Bordetella bronchiseptica]
Length = 382
Score = 79.6 bits (196), Expect = 9e-14
Identities = 80/342 (23%), Positives = 121/342 (35%), Gaps = 39/342 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPG--TRETD 58
++SI DV G+ VGH+ GVTVV P G R P T
Sbjct: 43 LDSIGDVPGVTVGHFTLAQG------ARQTGVTVVRPHEGD----PFRNKVPAAATVLNG 92
Query: 59 LLDPANSVRFVDALLLAGGSAYGLA-AADGVMRWLEEHRRGVAMDSGVVPIVPGAVIF-- 115
++ + +L A A V + G ++F
Sbjct: 93 FGKSCGLIQVEELGVLETPIALTNTFAVGAVANAQIRQAIAANPEIGRAWPTVNPLVFEC 152
Query: 116 -DLPVGGWNCRPTADFGY-SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG- 172
D + + A+ Y A A G+VG G G + KGG+G+AS ++
Sbjct: 153 NDGYLNDIQAQAVAEAHYEQAWRGAASVFEQGSVGAGRGMSSFGFKGGIGSASRLAEAYP 212
Query: 173 ---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
TVG L + N G P+ L A A
Sbjct: 213 GQRYTVGALVLSNFGQRSSMTIAGRPFGRRLA----------------AAARDGEPAGQP 256
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPP 288
+ I ++A DA L RR+++ A GLART GD A +T +
Sbjct: 257 EKGSIILLLATDAPLDSRQLRRLSLRAGAGLART-GSVFGHGSGDIALAFSTAYTIPHLA 315
Query: 289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E G+P + + A+ AAA+ + +A++A + A+ VAG
Sbjct: 316 ERGMPVQVMLHETRIDALFEAAAEAVEQAIVAALWRAETVAG 357
>gi|33597782|ref|NP_885425.1| probable D-aminopeptidase [Bordetella parapertussis]
gi|33574211|emb|CAE38543.1| probable D-aminopeptidase [Bordetella parapertussis]
Length = 382
Score = 78.8 bits (194), Expect = 1e-13
Identities = 80/342 (23%), Positives = 121/342 (35%), Gaps = 39/342 (11%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPG--TRETD 58
++SI DV G+ VGH+ GVTVV P G R P T
Sbjct: 43 LDSIGDVPGVTVGHFTLAQG------ARQTGVTVVRPHEGD----PFRNKVPAAATVLNG 92
Query: 59 LLDPANSVRFVDALLLAGGSAYGLA-AADGVMRWLEEHRRGVAMDSGVVPIVPGAVIF-- 115
++ + +L A A V + G ++F
Sbjct: 93 FGKSCGLIQVEELGVLETPIALTNTFAVGAVANAQIRQAIAANPEIGRAWPTVNPLVFEC 152
Query: 116 -DLPVGGWNCRPTADFGY-SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG- 172
D + + A+ Y A A G+VG G G + KGG+G+AS ++
Sbjct: 153 NDGYLNDIQAQAVAEVHYEQAWRGAASVFEQGSVGAGRGMSSFGFKGGIGSASRLAEAYP 212
Query: 173 ---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
TVG L + N G P+ L A A
Sbjct: 213 GQRYTVGALVLSNFGQRSSMTIAGRPFGRRLA----------------AAARDGEPAGQP 256
Query: 230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPP 288
+ I ++A DA L RR+++ A GLART GD A +T +
Sbjct: 257 EKGSIILLLATDAPLDSRQLRRLSLRAGAGLART-GSVFGHGSGDIALAFSTAYTIPHLA 315
Query: 289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
E G+P + + A+ AAA+ + +A++A + A+ VAG
Sbjct: 316 ERGMPVQVMLHETRIDALFEAAAEAVEQAIVAALWRAETVAG 357
>gi|23038492|ref|ZP_00070632.1| COG3191: L-aminopeptidase/D-esterase [Oenococcus oeni MCW]
Length = 305
Score = 73.4 bits (180), Expect = 5e-12
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 23/155 (14%)
Query: 134 ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL----QSGVTVGVLAVVNAAGNVVD 189
A AA + G VG G G LKGG+G++S + T+G L + N
Sbjct: 85 ALNAAKDTLEEGAVGGGRGMVCYGLKGGIGSSSRIVKVDDDHTYTLGALVMTN------- 137
Query: 190 PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAAC 249
+ F + P + A +S + I V+A DA L+
Sbjct: 138 --------YGFLDNFIVNGIPIGKSLAEMLVSDKQK---EEKGSIITVLATDAPLNSRQL 186
Query: 250 RRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
+R+A A G+ RT G+ VFA +T +
Sbjct: 187 KRLAKRATVGINRT-GGYIGNGSGEIVFAFSTSNL 220
>gi|15889775|ref|NP_355456.1| AGR_C_4562p [Agrobacterium tumefaciens]
gi|17936391|ref|NP_533181.1| aminopeptidase [Agrobacterium tumefaciens str. C58 (U. Washington)]
gi|25521460|pir||H97660 D-aminopeptidase (PAB0045) (strain orsay) [imported] -
Agrobacterium tumefaciens (strain C58, Cereon)
gi|25522465|pir||AC2885 aminopeptidase Atu2510 [imported] - Agrobacterium tumefaciens
(strain C58, Dupont)
gi|15157697|gb|AAK88241.1| AGR_C_4562p [Agrobacterium tumefaciens str. C58 (Cereon)]
gi|17741004|gb|AAL43497.1| aminopeptidase [Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 362
Score = 63.8 bits (155), Expect = 5e-09
Identities = 72/300 (24%), Positives = 108/300 (36%), Gaps = 63/300 (21%)
Query: 1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG---------TVGAVDCRGGA 51
+N+ITDV G+ GH ++ G G T +LP G + G
Sbjct: 34 LNAITDVEGVTSGHSTVIE-----GETIRTGATAILPHGGNLFQDKVPAAFAVYNGFGKF 88
Query: 52 PGTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPG 111
G+ + + L + ++L A G A + + H + VV I
Sbjct: 89 VGSTQIEELGELET-----PIILTNTLATGRA-----IEAINRHTLAQPGNEKVVSI--N 136
Query: 112 AVIF---DLPVGGWNC-RPTADFGYSACAAAGV-DVAVGTVGVGVGARAGALKGGVGTAS 166
AV+ D + RPT D +A A VA G VG G G A +KGG+GTAS
Sbjct: 137 AVVGETNDSRLNDIRAGRPTVDEISAALKNAATGPVAEGGVGAGTGTVAFGMKGGIGTAS 196
Query: 167 ATL---QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP 223
+ T+G+L N G+++ E
Sbjct: 197 RRVTISGQAYTIGILVQSNYGGHLLV--------------CGKPYVSPEHKDKD------ 236
Query: 224 LGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA 283
+ + ++A DA LS +R+A + GLART A + GD A +T
Sbjct: 237 --------GSIVIIVATDAPLSSRNLKRLAARSFGGLART-GAALSNGSGDYALAFSTDE 287
>gi|28210592|ref|NP_781536.1| conserved protein [Clostridium tetani E88]
gi|28203030|gb|AAO35473.1| conserved protein [Clostridium tetani E88]
Length = 103
Score = 48.4 bits (115), Expect = 2e-04
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 15/70 (21%)
Query: 254 IAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADC 313
A++ +T+ AH+ DGDT+F L T V V +G A
Sbjct: 41 SMAYNTYGKTMNLAHSMFDGDTIFTLGTNKVKCD---------------VNTIGMLAVKV 85
Query: 314 LARAVLAGVL 323
+ R+VL G+
Sbjct: 86 MERSVLNGIK 95
>gi|28875488|gb|AAO59969.1| putative aminopeptidase [uncultured bacterium]
Length = 115
Score = 44.9 bits (106), Expect = 0.003
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 118 PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG---VT 174
+ G + P A +G VA G+VG G G A KGG+GT+S + +G T
Sbjct: 15 DIRGQHVTPAQVVDAIRAARSG-PVAEGSVGAGTGTIAFGWKGGIGTSSRAVTAGGSSYT 73
Query: 175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALA 218
VGVL N G++V G+P A A R + A A
Sbjct: 74 VGVLVQSNYGGDLVM--AGVPVGASSPPGGARRTRVPVRPTARA 115
>gi|23111287|ref|ZP_00096975.1| COG3191: L-aminopeptidase/D-esterase [Desulfitobacterium hafniense]
Length = 184
Score = 44.1 bits (104), Expect = 0.004
Identities = 32/117 (27%), Positives = 43/117 (36%), Gaps = 28/117 (23%)
Query: 2 NSITDVGGIRVGHYQRL---DPDASLGAGWACGVTVVLPPPGTVGAVDCRG--------- 49
N ITDV G+ VGH + P G+T + P PG + CR
Sbjct: 22 NDITDVPGVLVGHVSLIKGYGPLIPGVGPVRTGITAIRPHPGNIYREPCRAGIHVMNGFG 81
Query: 50 ---GAPGTRETDLLDPANSVRFVDALLLAGG-SAYGLAAADGVMRWL--EEHRRGVA 100
G P +ET LL+ + L S Y AA G++ +L E G
Sbjct: 82 KSLGVPYIQETGLLNS--------PIFLTNTLSVY--DAAQGMLTYLLQENPEIGHD 128
>gi|32566780|ref|NP_505174.2| peptidoglycan-binding LysM and GRAM domain containing protein
family member (5I896) [Caenorhabditis elegans]
gi|27374486|gb|AAO12425.1| Hypothetical protein F52E1.13c [Caenorhabditis elegans]
Length = 819
Score = 34.1 bits (78), Expect = 3.5
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
+G + VGT G A + +A+ TLQSG+ G A + AG VVD
Sbjct: 347 SGAEKVVGTAVQGTKTVAHGVVTHTKSAADTLQSGIENGAKAAADVAGRVVD 398
>gi|26991199|ref|NP_746624.1| conserved hypothetical protein [Pseudomonas putida KT2440]
gi|24986247|gb|AAN70088.1| conserved hypothetical protein [Pseudomonas putida KT2440]
Length = 751
Score = 34.1 bits (78), Expect = 4.0
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 72 LLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNC 124
L+L+GG+A GLA GV++ LEE + +G GAV+ L G++
Sbjct: 52 LVLSGGAARGLAHI-GVLKALEEQGVRIDAIAGT---SMGAVVGGLYASGYSV 100
>gi|39590311|emb|CAE66050.1| Hypothetical protein CBG11250 [Caenorhabditis briggsae]
Length = 842
Score = 34.1 bits (78), Expect = 4.0
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
+G + VGT G A + +A+ TLQSG+ G A + AG VVD
Sbjct: 371 SGAEKVVGTAVQGTKTVAHGVVTHTKSAADTLQSGIENGAKAAADVAGRVVD 422
>gi|32566776|ref|NP_505173.2| peptidoglycan-binding LysM and GRAM domain containing protein
family member, possibly N-myristoylated (5I896)
[Caenorhabditis elegans]
gi|27374484|gb|AAO12423.1| Hypothetical protein F52E1.13a [Caenorhabditis elegans]
Length = 840
Score = 34.1 bits (78), Expect = 4.0
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
+G + VGT G A + +A+ TLQSG+ G A + AG VVD
Sbjct: 368 SGAEKVVGTAVQGTKTVAHGVVTHTKSAADTLQSGIENGAKAAADVAGRVVD 419
>gi|22976051|ref|ZP_00021963.1| COG1364: N-acetylglutamate synthase (N-acetylornithine
aminotransferase) [Ralstonia metallidurans]
Length = 256
Score = 34.1 bits (78), Expect = 4.3
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 220 LSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFAL 279
+S G T +G IA DAA++ +++ A D +I D+ +
Sbjct: 28 ISKGAGMIRPNMATMLGFIATDAAVAQPVLQKLVSHAADHSFNSITIDGDTSTNDSFVLI 87
Query: 280 ATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLA 320
A+G V + AA VTA+ A LA+A++
Sbjct: 88 ASGKAGVTIDRAEGAAFEALRDAVTAL----AQELAQAIVR 124
>gi|17987468|ref|NP_540102.1| H+ TRANSLOCATING PYROPHOSPHATE SYNTHASE [Brucella melitensis]
gi|25290364|pir||AC3400 inorganic diphosphatase (EC 3.6.1.1) [imported] - Brucella
melitensis (strain 16M)
gi|17983163|gb|AAL52366.1| H+ TRANSLOCATING PYROPHOSPHATE SYNTHASE [Brucella melitensis 16M]
Length = 775
Score = 34.1 bits (78), Expect = 4.4
Identities = 36/162 (22%), Positives = 55/162 (33%), Gaps = 11/162 (6%)
Query: 154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQ 213
L G GTA A G++ ++A G V D A G+ MA L E +
Sbjct: 463 STYQLAGLFGTAIAVTAMLGIAGMIVALDAFGPVTDNAGGIAEMAGLDPEVRKA---TDA 519
Query: 214 IAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDG 273
+ A+ + + + +G + L A +A A +G I P + G
Sbjct: 520 LDAVGNTTKAVTKGYAIGSAGLGALV----LFAAYSNDLAYFAANG---QIYPYFADM-G 571
Query: 274 DTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLA 315
F L+ V G +TAVG A +
Sbjct: 572 PVSFDLSNPYVVAGLIFGGLIPYLFGGMAMTAVGRAGGAVVQ 613
>gi|32566782|ref|NP_872149.1| peptidoglycan-binding LysM and GRAM domain containing protein
family member, possibly N-myristoylated (5I896)
[Caenorhabditis elegans]
gi|27374487|gb|AAO12426.1| Hypothetical protein F52E1.13d [Caenorhabditis elegans]
Length = 726
Score = 33.7 bits (77), Expect = 5.1
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
+G + VGT G A + +A+ TLQSG+ G A + AG VVD
Sbjct: 368 SGAEKVVGTAVQGTKTVAHGVVTHTKSAADTLQSGIENGAKAAADVAGRVVD 419
>gi|23058719|ref|ZP_00083754.1| COG0729: Outer membrane protein [Pseudomonas fluorescens PfO-1]
Length = 475
Score = 33.3 bits (76), Expect = 6.7
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 72 LLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNC 124
L+L+GG+A GLA GV++ LEE + +G GAV+ L G+
Sbjct: 33 LVLSGGAARGLAHI-GVLKALEEQGIKIDAIAGT---SMGAVVGGLYASGYKI 81
>gi|22299454|ref|NP_682701.1| ORF_ID:tll1911~arginine biosynthesis bifunctional protein ArgJ
includes glutamate n-acetyltransferase and amino-acid
acetyltransferase [Thermosynechococcus elongatus BP-1]
gi|30172825|sp|Q8DHN4|ARGJ_SYNEL Arginine biosynthesis bifunctional protein argJ [Includes:
Glutamate N-acetyltransferase (Ornithine
acetyltransferase) (Ornithine transacetylase) (OATase);
Amino-acid acetyltransferase (N-acetylglutamate
synthase) (AGS)] [Contains: Arginine biosynthesis
bifunctional protein argJ alpha chain; Arginine
biosynthesis bifunctional protein argJ beta chain]
gi|22295637|dbj|BAC09463.1| ORF_ID:tll1911~arginine biosynthesis bifunctional protein ArgJ
includes glutamate n-acetyltransferase and amino-acid
acetyltransferase [Thermosynechococcus elongatus BP-1]
Length = 419
Score = 33.3 bits (76), Expect = 6.7
Identities = 27/86 (31%), Positives = 37/86 (43%)
Query: 231 FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA 290
T + I CDAA+SP + + A D I D+V ALA G P A
Sbjct: 189 MATMLAFITCDAAVSPHLWQEMLQRACDRSFNQITVDGDTSTNDSVIALANGQSRTPAIA 248
Query: 291 GVPAALSPETQLVTAVGAAAADCLAR 316
AA + +++TAV A +AR
Sbjct: 249 EPGAAATRLEEMLTAVCVHLAKAIAR 274
>gi|18419442|gb|AAL69328.1| inorganic pyrophosphatase [Brucella melitensis biovar Suis]
Length = 680
Score = 33.3 bits (76), Expect = 6.7
Identities = 36/162 (22%), Positives = 55/162 (33%), Gaps = 11/162 (6%)
Query: 154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQ 213
L G GTA A G++ ++A G V D A G+ MA L E +
Sbjct: 368 STYQLAGLFGTAIAVTAMLGIAGMIVALDAFGPVTDNAGGIAEMAGLDPEVRKA---TDA 424
Query: 214 IAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDG 273
+ A+ + + + +G + L A +A A +G I P + G
Sbjct: 425 LDAVGNTTKAVTKGYAIGSAGLGALV----LFAAYSNDLAYFAANG---QIYPYFADM-G 476
Query: 274 DTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLA 315
F L+ V G +TAVG A +
Sbjct: 477 PVSFDLSNPYVVAGLIFGGLIPYLFGGMAMTAVGRAGGAVVQ 518
>gi|23501658|ref|NP_697785.1| V-type H(+)-translocating pyrophosphatase [Brucella suis 1330]
gi|33301184|sp|Q8G1E6|HPPA_BRUSU Pyrophosphate-energized proton pump (Pyrophosphate-energized
inorganic pyrophosphatase) (H+-PPase) (Membrane-bound
proton-translocating pyrophosphatase)
gi|23347578|gb|AAN29700.1| V-type H(+)-translocating pyrophosphatase [Brucella suis 1330]
Length = 718
Score = 33.3 bits (76), Expect = 6.9
Identities = 36/162 (22%), Positives = 55/162 (33%), Gaps = 11/162 (6%)
Query: 154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQ 213
L G GTA A G++ ++A G V D A G+ MA L E +
Sbjct: 406 STYQLAGLFGTAIAVTAMLGIAGMIVALDAFGPVTDNAGGIAEMAGLDPEVRKA---TDA 462
Query: 214 IAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDG 273
+ A+ + + + +G + L A +A A +G I P + G
Sbjct: 463 LDAVGNTTKAVTKGYAIGSAGLGALV----LFAAYSNDLAYFAANG---QIYPYFADM-G 514
Query: 274 DTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLA 315
F L+ V G +TAVG A +
Sbjct: 515 PVSFDLSNPYVVAGLIFGGLIPYLFGGMAMTAVGRAGGAVVQ 556
>gi|33301205|sp|Q8YGH4|HPPA_BRUME Pyrophosphate-energized proton pump (Pyrophosphate-energized
inorganic pyrophosphatase) (H+-PPase) (Membrane-bound
proton-translocating pyrophosphatase)
Length = 718
Score = 33.3 bits (76), Expect = 7.5
Identities = 36/162 (22%), Positives = 55/162 (33%), Gaps = 11/162 (6%)
Query: 154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQ 213
L G GTA A G++ ++A G V D A G+ MA L E +
Sbjct: 406 STYQLAGLFGTAIAVTAMLGIAGMIVALDAFGPVTDNAGGIAEMAGLDPEVRKA---TDA 462
Query: 214 IAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDG 273
+ A+ + + + +G + L A +A A +G I P + G
Sbjct: 463 LDAVGNTTKAVTKGYAIGSAGLGALV----LFAAYSNDLAYFAANG---QIYPYFADM-G 514
Query: 274 DTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLA 315
F L+ V G +TAVG A +
Sbjct: 515 PVSFDLSNPYVVAGLIFGGLIPYLFGGMAMTAVGRAGGAVVQ 556
>gi|21232003|ref|NP_637920.1| TonB-dependent receptor [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|21113738|gb|AAM41844.1| TonB-dependent receptor [Xanthomonas campestris pv. campestris str.
ATCC 33913]
Length = 996
Score = 32.9 bits (75), Expect = 7.8
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 8 GGIRVGHYQRLDPDASLGAGWACGV----TVVLPPPGTVGAVDCRGGAPGTRETDLLD-P 62
+G+ R A LG G+ T+VL V G +PG+ D+ P
Sbjct: 93 PSYTLGNSTRFIGTAGLGLLDLRGMGVDRTLVL-----VNGRRHVGSSPGSTAVDVNTIP 147
Query: 63 ANSVRFVDALLLAGGS--AYGLAAADGVM 89
V V+ ++ GG+ YG A GV+
Sbjct: 148 VEWVERVE--VITGGASAVYGADAVAGVV 174
>gi|21243469|ref|NP_643051.1| TonB-dependent receptor [Xanthomonas axonopodis pv. citri str. 306]
gi|21109025|gb|AAM37587.1| TonB-dependent receptor [Xanthomonas axonopodis pv. citri str. 306]
Length = 996
Score = 32.9 bits (75), Expect = 9.4
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 8 GGIRVGHYQRLDPDASLGAGWACGV----TVVLPPPGTVGAVDCRGGAPGTRETDLLD-P 62
+G+ R A LG G+ T+VL V G +PG+ D+ P
Sbjct: 93 PSYTLGNSTRFIGTAGLGLLDLRGMGVDRTLVL-----VNGRRHVGSSPGSTAVDVNTIP 147
Query: 63 ANSVRFVDALLLAGGS--AYGLAAADGVM 89
V V+ ++ GG+ YG A GV+
Sbjct: 148 VEWVERVE--VITGGASAVYGADAVAGVV 174
