BLASTP2 Result
of  Bork Group's Advanced BLAST2 Search Service at  EMBL.
back to BLAST2

BLASTP 2.0MP-WashU [16-Dec-1999] [irix6-r10k-L64 23:35:48 16-Dec-1999]

Copyright (C) 1996-1999 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-1999) http://blast.wustl.edu

Query=  sw|Q10644|YD33_MYCTU Hypothetical protein Rv1333.
        (344 letters)

Database:  nrdb-95%
           879,644 sequences; 285,484,446 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done


Summary:                                   
                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

/:swissnew|Q10644|YD33_MYCTU Hypothetical protein Rv1333/...  1768  7.8e-182  1
/:tremblnew|AE017235|AE017235_250 product: "hypothetical ...  1425  1.7e-145  1
/:swiss|P53425|YD33_MYCLE Hypothetical protein ML1167.//:...  1337  3.7e-136  1
/:sptrembl|Q9KYV2|Q9KYV2 Hypothetical protein SCO3193.//:...   702  7.2e-69   1
/:sptrembl|Q82H62|Q82H62 Hypothetical protein.//:trembl|A...   666  4.7e-65   1
/:sptrembl|Q8FMU2|Q8FMU2 Conserved hypothetical protein./...   598  7.5e-58   1
/:sptrembl|Q89IG1|Q89IG1 Blr5678 protein.//:trembl|AP0059...   588  8.6e-57   1
/:sptrembl|Q98NL8|Q98NL8 Hypothetical protein mll0085.//:...   582  3.7e-56   1
/:sptremblnew|CAE29254|CAE29254 Peptidase family T4.//:tr...   574  2.6e-55   1
/:sptrembl|Q92PJ5|Q92PJ5 Hypothetical protein R01755.//:t...   571  5.5e-55   1
/:trembl|BX571866|BX571866_181 Photorhabdus luminescens s...   557  1.7e-53   1
/:sptrembl|Q8FWU6|Q8FWU6 Conserved hypothetical protein./...   554  3.5e-53   1
/:sptremblnew|CAE50384|CAE50384 Hypothetical protein.//:t...   553  4.4e-53   1
/:sptrembl|Q8R934|Q8R934 L-aminopeptidase/D-esterase.//:t...   538  1.7e-51   1
/:sptrembl|Q9A6A7|Q9A6A7 Hypothetical protein CC2187.//:t...   530  1.2e-50   1
/:sptrembl|Q83XN4|Q83XN4 Putative cysteine transferase.//...   525  4.1e-50   1
/:sptrembl|Q8NMQ3|Q8NMQ3 L-aminopeptidase/D-esterase.//:t...   512  9.8e-49   1
/:sptrembl|Q8UCD3|Q8UCD3 Hypothetical protein Atu2565.//:...   508  2.6e-48   1
/:sptrembl|Q8XKH3|Q8XKH3 Hypothetical protein CPE1422.//:...   468  4.5e-44   1
/:sptrembl|Q9RW87|Q9RW87 Hypothetical protein DR0782.//:t...   434  1.8e-40   1
/:sptrembl|Q97Y10|Q97Y10 Hypothetical protein SSO1540.//:...   218  1.1e-28   2
/:sptrembl|Q57326|Q57326 Endo-type 6-aminohexanoate OLIGO...   266  1.1e-22   1
/:sptrembl|Q9I3M6|Q9I3M6 Hypothetical protein PA1486.//:t...   192  2.1e-12   1
/:sptrembl|Q8XZL2|Q8XZL2 Probable D-aminopeptidase protei...   178  7.3e-11   1
/:sptrembl|Q88G81|Q88G81 D-aminopeptidase putative.//:tre...   153  7.4e-08   1
/:sptrembl|Q9V2J0|Q9V2J0 D-aminopeptidase.//:trembl|AJ248...   117  1.0e-07   2
/:sptrembl|Q7WD69|Q7WD69 Probable D-aminopeptidase (EC 3....   138  1.1e-07   2
/:sptrembl|O57784|O57784 361AA long hypothetical D-aminop...   123  1.1e-07   2
/:sptrembl|Q8TZR1|Q8TZR1 D-aminopeptidase.//:trembl|AE010...   118  2.1e-07   2
/:sptrembl|Q8RAV6|Q8RAV6 L-aminopeptidase/D-esterase.//:t...   148  2.6e-07   1
/:sptrembl|Q8UCH7|Q8UCH7 Aminopeptidase.//:trembl|AE00816...   102  2.8e-06   3
/:sptrembl|Q8YBZ5|Q8YBZ5 D-aminopeptidase (EC 3.4.11.19)....   112  5.4e-06   2
/:sptrembl|Q8CVA7|Q8CVA7 D-aminopeptidase.//:trembl|AP004...   119  6.1e-06   2
/:sptrembl|Q930Z6|Q930Z6 Putative D-aminopeptidase.//:tre...   122  2.2e-05   2
/:sptrembl|Q98IB6|Q98IB6 Probable D-aminopeptidase.//:tre...   104  4.6e-05   2
/:sptrembl|Q848K7|Q848K7 Putative aminopeptidase.//:tremb...    99  0.00036   1
/:sptrembl|Q98JC5|Q98JC5 Hypothetical protein mll2007.//:...   115  0.00086   1
/:sptrembl|Q9L0P1|Q9L0P1 Hypothetical protein SCO4250.//:...   120  0.0017    1
/:trembl|BX571866|BX571866_200 Photorhabdus luminescens s...   114  0.0020    1
/:sptrembl|Q987V4|Q987V4 D-aminopeptidase.//:trembl|AP003...   113  0.0024    1
/:sptremblnew|BAD08025|BAD08025 Hypothetical protein P048...    91  0.0026    1
/:pdb|1B65|1B65-A  STRUCTURE OF L-AMINOPEPTIDASE D-ALA-ES...   112  0.0031    1
/:sptrembl|Q9X6K5|Q9X6K5 Hypothetical protein.//:trembl|A...   101  0.0035    1
/:sptrembl|Q8VHG2|Q8VHG2 Angiomotin.//:trembl|AF461135|AF...   116  0.0037    1
/:sptrembl|Q8UK81|Q8UK81 Aminopeptidase.//:trembl|AE00789...   100  0.0076    2
/:sptrembl|O50430|O50430 Hypothetical protein Rv1174c.//:...    86  0.0092    1
/:tremblnew|AE017242|AE017242_183 product: "hypothetical ...    97  0.011     2
/:sptremblnew|BAD08024|BAD08024 Hypothetical protein P048...    85  0.012     1
/:sptrembl|Q8XRM8|Q8XRM8 Probable signal peptide protein....   107  0.025     1
/:sptrembl|O13028|O13028 Antifreeze glycopeptide AFGP pol...   104  0.037     1
/:trembl|K03506|BTELC_1 Bovine elastin c mRNA, complete c...   104  0.057     1
/:swiss|P04985|ELS_BOVIN Elastin precursor (Tropoelastin)...   104  0.060     1
/:swissnew|O06250|YY33_MYCTU Hypothetical protein Rv3433c...    88  0.084     2
/:sptrembl|Q7VUX6|Q7VUX6 Putative integral membrane prote...    77  0.092     2
/:sptrembl|Q28099|Q28099 Elastin-cBEL1 (Fragment).//:trem...   101  0.11      1
/:sptrembl|Q896W7|Q896W7 Conserved protein.//:trembl|AE01...    70  0.13      2
/:sptremblnew|CAE48819|CAE48819 Putative secreted protein...    92  0.13      1
/:sptrembl|Q94HY7|Q94HY7 Hypothetical protein.//:sptrembl...    92  0.14      1
/:sptrembl|Q9L547|Q9L547 AknF.//:trembl|AF257324|AF257324...    96  0.15      1
/:sptrembl|O15336|O15336 Elastin (Fragment).//:trembl|U93...    99  0.16      1
/:sptrembl|Q9LAX0|Q9LAX0 Hypothetical protein (Fragment)....   102  0.18      1
/:sptrembl|Q8N2G0|Q8N2G0 Hypothetical protein HEMBA100044...    97  0.18      1
/:trembl|U00020|ML020_14 product: "u229g";  Mycobacterium...    80  0.18      2
/:sptrembl|Q01916|Q01916 IpiB3 protein precursor.//:tremb...    95  0.19      1
/:sptrembl|Q9GUB4|Q9GUB4 Heavy-chain fibroin (Fragment)./...    96  0.21      1
/:swiss|P37391|YY33_MYCLE Hypothetical protein ML0373.//:...    81  0.22      2
/:swiss|P15502|ELS_HUMAN Elastin precursor (Tropoelastin)...    98  0.24      1
/:sptrembl|Q8DS95|Q8DS95 Hypothetical protein.//:trembl|A...    72  0.26      1
/:sptrembl|Q28098|Q28098 Elastin (Fragment).//:trembl|M19...    97  0.29      1
/:sptrembl|Q01914|Q01914 IpiB2 protein precursor.//:tremb...    93  0.29      1
/:sptrembl|Q9S209|Q9S209 Hypothetical protein SCO1791.//:...    94  0.30      1
/:swiss|Q8DHN4|ARGJ_SYNEL Arginine biosynthesis bifunctio...    94  0.30      1
/:sptrembl|Q14234|Q14234 Elastin.//:trembl|M17282|HSEL20_...    97  0.31      1
/:sptrembl|Q8G9V7|Q8G9V7 Hypothetical protein.//:trembl|A...    71  0.32      1
/:swiss|P54320|ELS_MOUSE Elastin precursor (Tropoelastin)...    97  0.35      1
/:sptrembl|Q98JW2|Q98JW2 Hypothetical protein mll1751.//:...    90  0.36      1
/:sptrembl|Q9HQP1|Q9HQP1 Vng1069c.//:trembl|AE005039|AE00...    91  0.37      1
/:sptrembl|Q8G9V6|Q8G9V6 Hypothetical protein.//:trembl|A...    70  0.39      1
/:sptrembl|Q8PGR8|Q8PGR8 Outer membrane protein.//:trembl...    97  0.44      1
/:swissnew|P02834|HMUX_DROME Homeotic Ultrabithorax prote...    91  0.50      1
/:sptrembl|Q8VC49|Q8VC49 Similar to TLH29 protein.//:trem...    89  0.51      1
/:sptrembl|Q9WX72|Q9WX72 Hypothetical protein (ORF569 pro...    93  0.51      1
/:sptrembl|O33312|O33312 PPE-family protein.//:trembl|AE0...    91  0.52      1
/:sptrembl|Q9BIU2|Q9BIU2 Fibroin 1 (Fragment).//:trembl|A...    94  0.53      1
/:pironly|JQ0138|JQ0138 hypothetical 18.2K protein - Pseu...    86  0.54      1
/:sptrembl|Q9KYH3|Q9KYH3 Putative small secreted protein....    68  0.56      1
/:sptrembl|Q829C4|Q829C4 Hypothetical protein.//:trembl|A...    91  0.59      1
/:sptrembl|O18504|O18504 Melanogenic peroxidase.//:trembl...    94  0.63      1
/:sptrembl|Q8K6B1|Q8K6B1 Putative tail protein-phage asso...    96  0.63      1
/:sptrembl|Q8UDK8|Q8UDK8 Lytic murein transglycosylase.//...    89  0.64      1
/:sptrembl|Q98BA1|Q98BA1 Hypothetical protein mll5666.//:...    86  0.64      1
/:sptrembl|Q8NBI4|Q8NBI4 Hypothetical protein NT2RP300347...    92  0.66      1
/:sptrembl|Q9NI17|Q9NI17 Merozoite surface protein 2 (Fra...    75  0.68      1
/:sptrembl|Q826P5|Q826P5 Putative reductase.//:trembl|AP0...    88  0.69      1
/:sptrembl|Q8VKM5|Q8VKM5 Hypothetical protein MT0356.//:t...    90  0.71      1
/:sptrembl|Q23057|Q23057 Hypothetical protein.//:trembl|U...    89  0.71      1
/:sptrembl|Q7X7Z3|Q7X7Z3 OSJNBa0079A21.5 protein (OSJNBb0...    87  0.72      1
/:swiss|P40119|CBYC_ALCEU CbbY protein, chromosomal.//:tr...    86  0.72      1
/:sptrembl|Q9ZB96|Q9ZB96 Hypothetical protein.//:trembl|U...    87  0.74      2
/:sptrembl|Q81QH5|Q81QH5 Hypothetical protein.//:trembl|A...    88  0.75      1
/:swiss|Q9HPL2|COBS_HALN1 Cobalamin synthase (EC 2.-.-.-)...    83  0.81      1
/:sptrembl|Q93JH7|Q93JH7 Putative integral membrane prote...    90  0.81      1
/:sptrembl|Q9NI07|Q9NI07 Merozoite surface protein 2 (Fra...    65  0.82      1
/:sptrembl|Q99013|Q99013 HPLC8 protein.//:trembl|M62413|P...    65  0.82      1
/:trembl|AE003714|AE003714_26 gene: "Ubx"; product: "CG10...    87  0.83      1
/:tremblnew|BC065566|BC065566_1 product: "Unknown (protei...    90  0.84      1
/:sptrembl|Q8KRX8|Q8KRX8 NbmC.//:trembl|AF521878|AF521878...    88  0.84      1
/:sptrembl|Q81YJ5|Q81YJ5 Hypothetical protein.//:trembl|A...    83  0.85      1
/:sptremblnew|BAC86188|BAC86188 CDNA FLJ43523 fis, clone ...    89  0.85      1
/:sptrembl|Q9KYF3|Q9KYF3 Putative membrane protein.//:tre...    90  0.85      1
/:sptrembl|Q93H16|Q93H16 MFS_transporter protein (Putativ...    88  0.85      1
/:sptrembl|Q9YC39|Q9YC39 Hypothetical protein APE1412.//:...    80  0.86      1
/:sptremblnew|BAC85506|BAC85506 CDNA FLJ16246 fis, clone ...    89  0.86      1
/:sptrembl|Q9I3Y4|Q9I3Y4 Hypothetical protein PA1360.//:t...    85  0.88      1
/:sptrembl|Q8N160|Q8N160 Truncated non-neuronal splice va...    64  0.89      1
/:sptrembl|Q14235|Q14235 Elastin.//:trembl|M17282|HSEL20_...    89  0.92      1
/:tremblnew|AP005331|AP005331_99 gene: "VV0336"; product:...    68  0.92      1
/:sptrembl|Q9A9F1|Q9A9F1 Hypothetical protein CC1037.//:t...    88  0.92      1
/:sptrembl|Q9RSY2|Q9RSY2 Hypothetical protein DR1987.//:t...    80  0.93      1
/:sptrembl|Q8UI23|Q8UI23 Hypothetical protein Atu0477.//:...    72  0.94      1
/:sptrembl|Q9W6J8|Q9W6J8 Chimeric AFGP/trypsinogen-like s...    88  0.96      1
/:swiss|Q99372|ELS_RAT Elastin precursor (Tropoelastin) (...    89  0.96      1
/:sptrembl|Q46387|Q46387 Chlorosome protein D (CSMD prote...    73  0.96      1
/:swiss|Q8YVA8|ARJ1_ANASP Arginine biosynthesis bifunctio...    85  0.97      1
/:swiss|P07916|ELS_CHICK Elastin precursor (Tropoelastin)...    88  0.97      1
/:sptrembl|Q83EF3|Q83EF3 Lipoprotein, putative.//:trembl|...    62  0.97      1
/:tremblnew|AE017241|AE017241_233 gene: "ccsA"; product: ...    82  0.97      1
/:sptrembl|Q8VKL9|Q8VKL9 PPE family protein.//:trembl|AE0...    85  0.98      1
/:sptremblnew|CAC80912|CAC80912 NikN protein.//:tremblnew...    86  0.98      1
/:tremblnew|AE017239|AE017239_143 product: "hypothetical ...    84  0.98      1
/:sptremblnew|AAQ23591|AAQ23591 RE13779p.//:trembl|BT0102...    67  0.98      2
/:sptrembl|Q7WQ83|Q7WQ83 Autotransporter.//:trembl|BX6404...    92  0.98      1
/:trembl|M93009|HSIZOI_1 product: "L-isoaspartyl/D-aspart...    71  0.99      1
/:swiss|P55569|Y4MJ_RHISN Probable ABC transporter permea...    83  0.99      1
/:trembl|AX196074|AX196074_1 Sequence 146 from Patent WO0...    83  0.99      1
/:sptrembl|O17436|O17436 Minor ampullate silk protein MiS...    77  0.99      1
/:tremblnew|AE017230|AE017230_89 product: "hypothetical p...    84  0.991     1
/:sptrembl|Q01927|Q01927 IpiB1 protein precursor.//:tremb...    82  0.991     1
/:sptrembl|Q92LP2|Q92LP2 Hypothetical protein R02993.//:t...    61  0.991     1
/:sptrembl|O06556|O06556 Hypothetical protein Rv1158c.//:...    80  0.992     1
/:sptrembl|Q9HRT4|Q9HRT4 Vng0555c.//:trembl|AE005006|AE00...    77  0.993     2
/:sptrembl|Q95VQ0|Q95VQ0 Fibroin heavy chain (Fragment)./...    76  0.995     1
/:sptrembl|Q55600|Q55600 Hypothetical protein sll0327.//:...    75  0.995     1
/:sptremblnew|BAD08023|BAD08023 Fibroin heavy chain-like ...    80  0.995     1
/:sptrembl|Q9F5K8|Q9F5K8 Flagellar hook-associated protei...    89  0.996     1
/:sptrembl|O45197|O45197 Hypothetical protein.//:tremblne...    75  0.996     2
/:sptrembl|Q7Z5D6|Q7Z5D6 Medulloblastoma antigen MU-MB-2....    69  0.997     1
/:sptrembl|Q8S1H2|Q8S1H2 P0699H05.13 protein.//:tremblnew...    70  0.998     1
/:sptrembl|Q8XF00|Q8XF00 Putative exported protein (Putat...    60  0.998     1
/:sptrembl|Q82AN4|Q82AN4 Putative dihydrolipoamide S-succ...    77  0.998     2
/:sptrembl|O06393|O06393 Hypothetical protein (Cytochrome...    80  0.998     1
/:sptrembl|Q9RNI2|Q9RNI2 HmwA.//:trembl|AF180944|AF180944...    89  0.998     1
/:sptrembl|Q9N8G4|Q9N8G4 Conserved hypothetical protein./...    88  0.998     1
/:sptremblnew|CAE25768|CAE25768 Uroporphyrin-III C/tetrap...    81  0.999     1
/:sptremblnew|BAA25438|BAA25438 KIAA0512 protein (Fragmen...    85  0.9991    1
/:sptremblnew|AAR18957|AAR18957 Nitrite reductase (Fragme...    73  0.9992    1
/:sptrembl|Q7W3D2|Q7W3D2 Putative cytochrome c.//:trembl|...    81  0.9993    1
/:sptrembl|Q9XA49|Q9XA49 Putative dihydrolipoamide acyltr...    83  0.9994    1
/:sptrembl|Q9A3D8|Q9A3D8 Putative RNA polymerase sigma fa...    80  0.9995    1
/:sptrembl|Q82GK6|Q82GK6 Putative quinone oxidoreductase....    81  0.9996    1
/:sptrembl|Q9A139|Q9A139 Hypothetical b protein.//:trembl...    59  0.9996    1
/:sptrembl|Q81NZ8|Q81NZ8 Hypothetical protein.//:trembl|A...    59  0.9996    1
/:sptrembl|Q8YEV7|Q8YEV7 Methyltransferase (EC 2.1.1.-)./...    80  0.9997    1
/:sptrembl|O69949|O69949 Hypothetical protein SCO6574.//:...    81  0.9997    1
/:sptrembl|Q84BH5|Q84BH5 Vls recombination cassette Vls9a...    77  0.9997    1
/:sptrembl|Q8GFF3|Q8GFF3 Putative PHA synthase.//:trembl|...    85  0.9997    1
/:sptrembl|Q964F4|Q964F4 Fibroin.//:trembl|AF325500|AF325...    90  0.9998    1
/:sptrembl|Q89U06|Q89U06 Blr1616 protein.//:trembl|AP0059...    65  0.9999    2
/:tremblnew|AY455862|AY455862_1 product: "type I antifree...    70  0.9999    1
/:sptrembl|Q89M96|Q89M96 Blr4297 protein.//:trembl|AP0059...    76  0.9999    1
/:sptrembl|Q24925|Q24925 Peroxidase-like protein (Fragmen...    85  0.9999    1
/:sptrembl|Q8HAP6|Q8HAP6 Minor structural protein.//:sptr...    75  0.99991   1
/:sptrembl|Q16985|Q16985 Fibroin-1 (Fragment).//:trembl|U...    71  0.99993   2
/:sptrembl|Q69260|Q69260 Herpesvirus type 1 latency-relat...    80  0.99994   1
/:sptrembl|Q81AS5|Q81AS5 Collagen triple helix repeat pro...    78  0.99995   1
/:sptrembl|Q81BY6|Q81BY6 Hypothetical protein.//:trembl|A...    58  0.99995   1
/:trembl|L18919|RK2KILE_5 gene: "kleD";  Plasmid RK2 (fro...    58  0.99995   1
     


Query sequence and locally-aligned HSPs from database sequences

                        0         70       140       210       280         
                        |          |         |         |         |         |344
   sw|Q10644|YD33_MYC  | __________________________________________________
^ v swissnew|Q10644|YD | __________________________________________________
^ v tremblnew|AE017235 | __________________________________________________
^ v swiss|P53425|YD33_ | __________________________________________________
^ v sptrembl|Q9KYV2|Q9 | __________________________________________________
^ v sptrembl|Q82H62|Q8 | _________________________________________________
^ v sptrembl|Q8FMU2|Q8 | _________________________________________________
^ v sptrembl|Q89IG1|Q8 | __________________________________________________
^ v sptrembl|Q98NL8|Q9 | _________________________________________________
^ v sptremblnew|CAE292 | _________________________________________________
^ v sptrembl|Q92PJ5|Q9 | ________________________________________________
^ v trembl|BX571866|BX | _________________________________________________
^ v sptrembl|Q8FWU6|Q8 | _________________________________________________
^ v sptremblnew|CAE503 | ________________________________________________
^ v sptrembl|Q8R934|Q8 | _________________________________________________
^ v sptrembl|Q9A6A7|Q9 | _______________________________________________
^ v sptrembl|Q83XN4|Q8 | _________________________________________________
^ v sptrembl|Q8NMQ3|Q8 | _________________________________________________
^ v sptrembl|Q8UCD3|Q8 | __________________________________________________
^ v sptrembl|Q8XKH3|Q8 | _____________________________________________
^ v sptrembl|Q9RW87|Q9 | __________________________________________
^ v sptrembl|Q97Y10|Q9 |  ______________________________  ____________
^ v sptrembl|Q57326|Q5 | _______________________________________________
^ v sptrembl|Q9I3M6|Q9 | _______________________________________________
^ v sptrembl|Q8XZL2|Q8 | ________________________________________________
^ v sptrembl|Q88G81|Q8 | ________________________________________________
^ v sptrembl|Q9V2J0|Q9 | ___________________________       ______________
^ v sptrembl|Q7WD69|Q7 | ______               ___________________________
^ v sptrembl|O57784|O5 | ___________________________       ______________
^ v sptrembl|Q8TZR1|Q8 | ___________________________       ______________
^ v sptrembl|Q8RAV6|Q8 | ________________________________________________
^ v sptrembl|Q8UCH7|Q8 | ______            ___________     ______________
^ v sptrembl|Q8YBZ5|Q8 | ____________________________    ________________
^ v sptrembl|Q8CVA7|Q8 | ____________________________    ________
^ v sptrembl|Q930Z6|Q9 | ____________________________      _____________
^ v sptrembl|Q98IB6|Q9 | ______________________________    ______________
^ v sptrembl|Q848K7|Q8 |                     ________
^ v sptrembl|Q98JC5|Q9 |                   _____________________________
^ v sptrembl|Q9L0P1|Q9 |   ______________________________________________
^ v trembl|BX571866|BX | _________________________________________
^ v sptrembl|Q987V4|Q9 | ____________________________________________
^ v sptremblnew|BAD080 |                    __________
^ v pdb|1B65|1B65-A    | ________________________________________________
^ v sptrembl|Q9X6K5|Q9 |                    __________________
^ v sptrembl|Q8VHG2|Q8 |                 ________________________________
^ v sptrembl|Q8UK81|Q8 | ___________________________       _______________
^ v sptrembl|O50430|O5 |                      ____________
^ v tremblnew|AE017242 |         _______________________________  _________
^ v sptremblnew|BAD080 |                    __________
^ v sptrembl|Q8XRM8|Q8 |    _______________________________________________
^ v sptrembl|O13028|O1 |                    ______________________________
^ v trembl|K03506|BTEL |  _________________________________________________
^ v swiss|P04985|ELS_B |  _________________________________________________
^ v swissnew|O06250|YY |              _____________________________________
^ v sptrembl|Q7VUX6|Q7 |                _________________   _____________
^ v sptrembl|Q28099|Q2 |  _________________________________________________
^ v sptrembl|Q896W7|Q8 | __                                _______
^ v sptremblnew|CAE488 |                               ___________
^ v sptrembl|Q94HY7|Q9 |                       __________________
^ v sptrembl|Q9L547|Q9 |               ______________________________
^ v sptrembl|O15336|O1 |  _________________________________________________
^ v sptrembl|Q9LAX0|Q9 |   ______________________________________________
^ v sptrembl|Q8N2G0|Q8 |    ______________________________________________
^ v trembl|U00020|ML02 |              ____________________________________
^ v sptrembl|Q01916|Q0 |     ________________________
^ v sptrembl|Q9GUB4|Q9 |  _____________________________________________
^ v swiss|P37391|YY33_ |         __________________________________________
^ v swiss|P15502|ELS_H |  _________________________________________________
^ v sptrembl|Q8DS95|Q8 |                   ______
^ v sptrembl|Q28098|Q2 | __________________________________________________
^ v sptrembl|Q01914|Q0 |  ____________________________
^ v sptrembl|Q9S209|Q9 |                _________________________________
^ v swiss|Q8DHN4|ARGJ_ |                              _________________
^ v sptrembl|Q14234|Q1 |  _________________________________________________
^ v sptrembl|Q8G9V7|Q8 |                    _______
^ v swiss|P54320|ELS_M |            _____________________________________
^ v sptrembl|Q98JW2|Q9 |                   _________
^ v sptrembl|Q9HQP1|Q9 |           ______________________________________
^ v sptrembl|Q8G9V6|Q8 |                    _______
^ v sptrembl|Q8PGR8|Q8 |    _________________________
^ v swissnew|P02834|HM |             __________________
^ v sptrembl|Q8VC49|Q8 |                   ____________________________
^ v sptrembl|Q9WX72|Q9 |                     ____________________________
^ v sptrembl|O33312|O3 |             _________________________________
^ v sptrembl|Q9BIU2|Q9 |                     ______________________________
^ v pironly|JQ0138|JQ0 |                     _____________
^ v sptrembl|Q9KYH3|Q9 |                     _______
^ v sptrembl|Q829C4|Q8 |                     ______________________________
^ v sptrembl|O18504|O1 |            _____________________________________
^ v sptrembl|Q8K6B1|Q8 |                      ___________________________
^ v sptrembl|Q8UDK8|Q8 |                     ___________________________
^ v sptrembl|Q98BA1|Q9 |                   __________
^ v sptrembl|Q8NBI4|Q8 | __________________________________________________
^ v sptrembl|Q9NI17|Q9 |                     ___________
^ v sptrembl|Q826P5|Q8 |            ___________________
^ v sptrembl|Q8VKM5|Q8 |                     _____________________________
^ v sptrembl|Q23057|Q2 |            _____________________________________
^ v sptrembl|Q7X7Z3|Q7 |                    ____________________________
^ v swiss|P40119|CBYC_ |                                     ______________
^ v sptrembl|Q9ZB96|Q9 |      ______________________
^ v sptrembl|Q81QH5|Q8 |    _____________________________________________


Alignments:


^ = swissnew|Q10644|YD33_MYCTU Hypothetical protein
            Rv1333/MT1375/Mb1368.//:swiss|Q10644|YD33_MYCTU Hypothetical
            protein Rv1333/MT1375/Mb1368.//:trembl|AE007011|AE007011_3 gene:
            "MT1375"; product: "conserved hypothetical protein";  Mycobacterium
            tuberculosis CDC1551,  section 97 of 280 of the complete genome.
            //:trembl|BX248338|BX248338_156 gene: "Mb1368"; product: "PROBABLE
            HYDROLASE";  Mycobacterium bovis subsp. bovis AF2122/97 complete
            genome; segment 5/14 //:trembl|BX842576|BX842576_96 product:
            "PROBABLE HYDROLASE";  Mycobacterium tuberculosis H37Rv complete
            genome; segment 5/13 //:gp|BX842576|1340099 PROBABLE HYDROLASE
            [Mycobacterium tuberculosis H37Rv]//:gp|BX248338|31618118 PROBABLE
            HYDROLASE [Mycobacterium bovis subsp. bovis
            AF2122/97]//:gp|AE007011|13880983 conserved hypothetical protein
            [Mycobacterium tuberculosis CDC1551]
            Length = 344

                        0         70       140       210       280         
                        |          |         |         |         |         |344
swissnew|Q10644|YD33_  | __________________________________________________
Local hits (HSPs)      | __________________________________________________

 Score = 1768 (627.4 bits), Expect = 7.8e-182, P = 7.8e-182
 Identities = 344/344 (100%), Positives = 344/344 (100%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
             MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL
Sbjct:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60

Query:    61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
             DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG
Sbjct:    61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120

Query:   121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180
             GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV
Sbjct:   121 GWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV 180

Query:   181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
             VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC
Sbjct:   181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240

Query:   241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
             DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET
Sbjct:   241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300

Query:   301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
             QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS
Sbjct:   301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344


^ = tremblnew|AE017235|AE017235_250 product: "hypothetical protein";
            Mycobacterium avium subsp. paratuberculosis str. k10, section 9 of
            16 of the complete genome.
            Length = 347

                        0         70       140       210       280         
                        |          |         |         |         |         |347
tremblnew|AE017235|AE  | __________________________________________________
Local hits (HSPs)      | __________________________________________________

 Score = 1425 (506.7 bits), Expect = 1.7e-145, P = 1.7e-145
 Identities = 279/346 (80%), Positives = 295/346 (85%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
             MN+ITDVGGIRVGH+QRLDPDASLGAGWACGVTVVL  PGTVGAVDCRGGAPGTRETDLL
Sbjct:     1 MNAITDVGGIRVGHHQRLDPDASLGAGWACGVTVVLTAPGTVGAVDCRGGAPGTRETDLL 60

Query:    61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
             DPAN+VRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGVAMD GVVPIVPGAVIFDLPVG
Sbjct:    61 DPANTVRFVDAVLLAGGSAYGLAAADGVMRWLEEHDRGVAMDGGVVPIVPGAVIFDLPVG 120

Query:   121 GWNCRPTADFGYSACAAAGVD---VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
             GW CRPTA+FGY ACAAA  D    AVGTVG GVGARAGALKGGVGTAS TL SGVTVG 
Sbjct:   121 GWQCRPTAEFGYLACAAAARDDDAPAVGTVGAGVGARAGALKGGVGTASRTLPSGVTVGA 180

Query:   178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
             LAVVN+AG VVD ATGLPWM DLV +F LR PPAEQI A A L SP    + P NT I V
Sbjct:   181 LAVVNSAGEVVDRATGLPWMTDLVEQFGLRPPPAEQIEAFAALPSPSNPLDNPLNTVIAV 240

Query:   238 IACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALS 297
             +A DAALS AACRR+A+AAHDGLAR+IRPAHTP+DGDTVF LATGAV VPPEA  PAA S
Sbjct:   241 VATDAALSAAACRRVAVAAHDGLARSIRPAHTPVDGDTVFVLATGAVEVPPEADTPAAFS 300

Query:   298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFG 343
             PET+L T VG AAADCLA AVL GVL A  VAGIP+YRD+ PGA G
Sbjct:   301 PETRLATEVGVAAADCLAHAVLGGVLAADSVAGIPSYRDVLPGALG 346


^ = swiss|P53425|YD33_MYCLE Hypothetical protein
            ML1167.//:trembl|U00014|ML014_11 product: "B1549_C2_208";
            Mycobacterium leprae cosmid B1549. //:trembl|AL583921|MLEPRTN5_15
            gene: "ML1167"; product: "possible hydrolase";  Mycobacterium
            leprae strain TN complete genome; segment 5/10
            //:gp|AL583921|13093140 possible hydrolase [Mycobacterium
            leprae]//:gp|U00014|466914 B1549_C2_208 [Mycobacterium leprae]
            Length = 362

                        0          80        160        240        320     
                        |           |          |          |          |     |362
swiss|P53425|YD33_MYC  | __________________________________________________
Local hits (HSPs)      |  ________________________________________________

 Score = 1337 (475.7 bits), Expect = 3.7e-136, P = 3.7e-136
 Identities = 270/352 (76%), Positives = 289/352 (82%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
             MNSITD+ GI+VGHY RLDPDASLGAGWACGVTVVL PPGTVGAVDCRGG PGTRETDLL
Sbjct:     8 MNSITDISGIQVGHYHRLDPDASLGAGWACGVTVVLTPPGTVGAVDCRGGVPGTRETDLL 67

Query:    61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVG 120
             DPANSVRFVDA+LLAGGSAYGLAAADGVMRWLEEH RGV M  GVVPIVPGAVIFDL VG
Sbjct:    68 DPANSVRFVDAVLLAGGSAYGLAAADGVMRWLEEHERGVVMLGGVVPIVPGAVIFDLSVG 127

Query:   121 GWNCRPTADFGYSACAAA------GVD--VAVGTVGVGVGARAGALKGGVGTASATLQSG 172
              ++CRPTA+FGY AC AA      G D  VAVGTVG GVGARAG LKGGVGTAS TL+SG
Sbjct:   128 DFHCRPTAEFGYLACQAAYDAAVGGQDATVAVGTVGAGVGARAGVLKGGVGTASITLESG 187

Query:   173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
              TVG + VVN+ G+VVD ATGLPWM DL+ EFALR P  EQIA  AQL SPL A NT   
Sbjct:   188 PTVGAVVVVNSVGDVVDRATGLPWMTDLIDEFALRPPSPEQIAGFAQLKSPLSALNT--- 244

Query:   233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
              TIGV+A DA LSPAAC+R+A+AA DGLARTIRPAHT LDGDTVFALATGAV     A V
Sbjct:   245 -TIGVVATDATLSPAACQRVAMAAQDGLARTIRPAHTALDGDTVFALATGAVEATATADV 303

Query:   293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
             P A+SPET L+T VGAAA DCLARAVL  VL A+ VAGIPTY  MFPGAFG+
Sbjct:   304 PVAMSPETGLITEVGAAADDCLARAVLVAVLAAESVAGIPTYCGMFPGAFGT 355


^ = sptrembl|Q9KYV2|Q9KYV2 Hypothetical protein
            SCO3193.//:trembl|AL939115|SCO939115_140 gene: "SCO3193";
            "SCE22.10"; product: "conserved hypothetical protein SCE22.10";
            Streptomyces coelicolor A3(2) complete genome; segment 12/29
            //:gp|AL939115|7799513 conserved hypothetical protein SCE22.10
            [Streptomyces coelicolor A3(2)]
            Length = 348

                        0         70       140       210       280         
                        |          |         |         |         |         |348
sptrembl|Q9KYV2|Q9KYV  | __________________________________________________
Local hits (HSPs)      | __________________________________________________

 Score = 702 (252.2 bits), Expect = 7.2e-69, P = 7.2e-69
 Identities = 173/359 (48%), Positives = 213/359 (59%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDL 59
             ++++TDV G+ VGH  R       G GW  G TVVL P G  V  VD RGG PGT+ETD 
Sbjct:     3 VDALTDVAGLLVGHATRT------GDGWLTGTTVVLAPEGGAVAGVDVRGGGPGTKETDA 56

Query:    60 LDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFD 116
             LDP N V+ V A++L GGSAYGL AA GVM WLEE  RGV +    + VVP+VP A +FD
Sbjct:    57 LDPRNLVQKVQAVVLTGGSAYGLDAASGVMAWLEERGRGVRVGPDPAHVVPVVPAACVFD 116

Query:   117 LPVGG-WNCRPTADFGYSACAAA-----GVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
             L  GG +  RP A  GY+A AAA     G  VA G VG G GA  GALKGGVGTAS  L 
Sbjct:   117 LGRGGDFRARPDAVTGYAAVAAAHASAPGAAVAEGCVGAGTGAVVGALKGGVGTASTVLD 176

Query:   171 SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP 230
             SG+TV  L V NAAG+V DP TG+ +  +L     +  P  E   A  +  + + A N P
Sbjct:   177 SGITVAALVVANAAGSVTDPETGVLY-GELFRGGRVEYPAPEVHEAAGRRLAEVAARNAP 235

Query:   231 --FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
                NTT+ V+A DA LS A  +++A  AHDG+AR +RP H   DGDTVFALATG    P 
Sbjct:   236 PPLNTTLAVVATDAGLSKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFALATGVR--PL 293

Query:   289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI----PTYRDMFPGAFG 343
             +AG P AL+        V AA AD + RA++  V  A+PV G     P+Y  ++ G  G
Sbjct:   294 DAGQPLALNE-------VLAAGADVVTRAIVRAVRAAEPVDGPGGAWPSYGGLYGGPDG 345


^ = sptrembl|Q82H62|Q82H62 Hypothetical protein.//:trembl|AP005036|AP005036_43
            product: "hypothetical protein";  Streptomyces avermitilis genomic
            DNA, complete genome, section 16/30. //:gp|AP005036|29607338
            hypothetical protein [Streptomyces avermitilis MA-4680]
            Length = 342

                        0         70       140       210       280         
                        |          |         |         |         |         |342
sptrembl|Q82H62|Q82H6  | __________________________________________________
Local hits (HSPs)      | __________________________________________________

 Score = 666 (239.5 bits), Expect = 4.7e-65, P = 4.7e-65
 Identities = 169/358 (47%), Positives = 214/358 (59%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDL 59
             ++++TDV G+RVGH  R       G GW  G TVVL P G  V AVD RGG PGT+ETD 
Sbjct:     3 VDALTDVAGLRVGHATRT------GGGWLTGTTVVLAPEGGAVAAVDVRGGGPGTKETDA 56

Query:    60 LDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMD---SGVVPIVPGAVIFD 116
             LDP N V+ V+A++L GGSAYGL +A GVM WLEE RRGV +    + VVP+VP A +FD
Sbjct:    57 LDPRNLVQRVEAVVLTGGSAYGLDSASGVMAWLEEQRRGVRVGPDPAHVVPVVPAACVFD 116

Query:   117 LPVGG-WNCRPTADFGYSACAAA-----GVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
             L  GG +  RP A  G +A  AA     G  V  G VG G GA  G +KGGVGTAS  L 
Sbjct:   117 LGRGGDFRARPDAATGRAAVEAAAASEPGAPVPEGCVGAGTGAVVGQVKGGVGTASTVLG 176

Query:   171 SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGE-FALRAP-PAEQI--AALAQLSSPLGA 226
             SG+TV  L V NAAG+ VDP TG+     L GE F  R   PA+ +  AA  +L+    A
Sbjct:   177 SGITVAALVVANAAGSTVDPETGV-----LYGELFQGRVVYPADGVHEAARRRLAET-AA 230

Query:   227 FNTP--FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
              N P   NTT+ V+A DA L+ A  +++A  AHDG+AR +RP H   DGDTVF LATGA 
Sbjct:   231 KNAPPPLNTTLAVVATDAELTKAQAQKLAGTAHDGIARAVRPVHLLSDGDTVFTLATGAH 290

Query:   285 AVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI----PTYRDMF 338
              +P ++  P AL+        V AA AD + RA++  V  A+   G     P+Y +++
Sbjct:   291 PLPSDS--PLALNE-------VLAAGADVVTRAIVRAVRAAESADGPGGTWPSYGELY 339


^ = sptrembl|Q8FMU2|Q8FMU2 Conserved hypothetical
            protein.//:trembl|AP005222|AP005222_98 product: "conserved
            hypothetical protein";  Corynebacterium efficiens YS-314 DNA,
            complete genome, section 9/11. //:gp|AP005222|23494250 conserved
            hypothetical protein [Corynebacterium efficiens YS-314]
            Length = 317

                        0          70        140        210        280     
                        |           |          |          |          |     |317
sptrembl|Q8FMU2|Q8FMU  | __________________________________________________
Local hits (HSPs)      |  _________________________________________________

 Score = 598 (215.6 bits), Expect = 7.5e-58, P = 7.5e-58
 Identities = 158/345 (45%), Positives = 201/345 (58%)

Query:     4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
             + DV GI +GH    D           GVTVV+ P G    VD RGG PGTRETDLL+P 
Sbjct:     8 LCDVPGIHLGHVTSGDT----------GVTVVVAPGGAFAGVDVRGGGPGTRETDLLEPH 57

Query:    64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAM---DS-G-VVPIVPGAVIFDLP 118
             N+V+ V A+ L GGSAYGLAAADGVM  LEE   G  +   D  G +VPIVP AVIFDL 
Sbjct:    58 NTVQQVHAVALCGGSAYGLAAADGVMYALEERGIGFPVLGPDRPGPIVPIVPAAVIFDLL 117

Query:   119 VGGWNCRPTADFGYSAC--AAAGVDVAV-GTVGVGVGARAGALKGGVGTASATL-QSGVT 174
             VG    RPT + G +A   A AG    V G++G G GA AG L+GG G AS T+ +  V 
Sbjct:   118 VGDPTNRPTREHGLTAVDHALAGRQREVSGSIGAGTGATAGHLRGGFGQASTTVGEFVVA 177

Query:   175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
              G++A  N  G VVDP TG  + A   G       PA  +  LA +  P        NTT
Sbjct:   178 AGIVA--NPVGEVVDPTTGTLYGAP--GR------PAVDVDKLAAVPHPAA----DLNTT 223

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
             IGVIA +A ++ A  +R+A+  HDGLAR +RP+H+P+DGDT+FAL+TG        GV A
Sbjct:   224 IGVIATNAPVTKAQAKRLALTGHDGLARAVRPSHSPMDGDTLFALSTG-----DGTGVDA 278

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
              L      + ++ AAAADC+  A++  V +A P  G+ TYR++ P
Sbjct:   279 TL------LASLCAAAADCVQNAIVDAVTSASPGHGLTTYRELIP 317


^ = sptrembl|Q89IG1|Q89IG1 Blr5678 protein.//:trembl|AP005955|AP005955_221 gene:
            "blr5678";  Bradyrhizobium japonicum USDA 110 DNA, complete genome,
            section 21/31. //:gp|AP005955|27353954 blr5678 [Bradyrhizobium
            japonicum USDA 110]
            Length = 332

                        0         70        140        210       280       
                        |          |          |          |         |       |332
sptrembl|Q89IG1|Q89IG  | __________________________________________________
Local hits (HSPs)      | __________________________________________________

 Score = 588 (212.0 bits), Expect = 8.6e-57, P = 8.6e-57
 Identities = 144/351 (41%), Positives = 191/351 (54%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             N +TD+ G+RVGH +    DA +    A G T ++     V A+D RGG PGTRE  LLD
Sbjct:     3 NLLTDIAGVRVGHAE----DAKV----ASGTTAIIFDSPAVAAIDVRGGGPGTREDALLD 54

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
              AN+V  VDA+ L+GGSA+GL    GV  WL E  RG  +   ++PIVPGA++FDL  GG
Sbjct:    55 LANTVERVDAIALSGGSAFGLDTGGGVQAWLAEQGRGHRVREALIPIVPGAILFDLLNGG 114

Query:   122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
                W    P  D GY+A AAAG D A+G+VG G+GA     KGG+G+ASA    GV V  
Sbjct:   115 DKAWGRFSPYRDLGYAAAAAAGTDFAIGSVGAGLGATTATFKGGLGSASAVTPDGVKVAA 174

Query:   178 LAVVNAAGNVVDPATGLPWM----ADLVGEFALRAPPAEQIAALAQLSSPLG-AFNTPFN 232
             +  VNA G+V     G PW      ++ GE+  R  P +    + ++    G A +   N
Sbjct:   175 IVAVNAVGSVT-VGNG-PWFWAAPFEVDGEYGGRGLPDKFTDDMLRMRIKGGPAASAREN 232

Query:   233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
             TTIG +  DA L+    +R+A+ AH G AR I P H P DGD ++A AT    + P  G+
Sbjct:   233 TTIGAVVTDAVLTKPQAKRLAMIAHTGFARAIYPVHAPTDGDVLYAAATCEKPIEPLVGL 292

Query:   293 PAALSPETQLVTAVGAAAADCLARAVLAGVL--NAQPVAGI-PTYRDMFPG 340
                        T +G  AA+ +ARA+  GV    A P  G  P +RD F G
Sbjct:   293 -----------TELGTVAANVVARAIARGVYCATALPFGGAQPAWRDRFGG 332


^ = sptrembl|Q98NL8|Q98NL8 Hypothetical protein
            mll0085.//:trembl|AP002994|AP002994_62 gene: "mll0085";
            Mesorhizobium loti DNA, complete genome, section 1/21.
            //:gp|AP002994|14021130 hypothetical protein [Mesorhizobium loti]
            Length = 341

                        0         70        140       210       280        
                        |          |          |         |         |        |341
sptrembl|Q98NL8|Q98NL  | __________________________________________________
Local hits (HSPs)      |  ________________________________________________

 Score = 582 (209.9 bits), Expect = 3.7e-56, P = 3.7e-56
 Identities = 159/352 (45%), Positives = 193/352 (54%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             N ITDV G+RVG+      DA L +G    VT +L     V  V   GGAPGTRETDLL+
Sbjct:     8 NLITDVAGLRVGN----SSDARLKSG----VTTILCDEPAVAGVQILGGAPGTRETDLLE 59

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
             P NS+  + A++L+GGSA+GL AA GV   L E  RGV  + G   VPIVP A++FDL  
Sbjct:    60 PHNSIEAIHAVVLSGGSAFGLDAASGVQAALRE--RGVGFEVGGFRVPIVPAAILFDLRN 117

Query:   120 GG---WNCRPT-ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV 175
             GG   W   P   D GY A  +A  D  +GTVG G GA    LKGG+G+AS  L +GVT+
Sbjct:   118 GGDKDWGRYPPYRDLGYEAAQSAATDFQLGTVGAGTGALTAGLKGGLGSASTLLDTGVTI 177

Query:   176 GVLAVVNAAGNVVDPATGLPWMADL-VG-EFA-LRAP---PAEQIAALAQLSSPLGA--F 227
             G LA VN  G+V    T   W A   +G EF  L  P   PA+    L +          
Sbjct:   178 GALAAVNPTGSVTVGRTRHLWAAPFEIGDEFGGLGYPSPMPADAKEILLKYRDKHAGKQM 237

Query:   228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
              T  NTTI VIA DA L+ AA +R+A++AHDG  R I P HTP DGD VFALATG   + 
Sbjct:   238 ETGGNTTIAVIATDAVLTKAAAKRLAMSAHDGFVRAIWPTHTPADGDLVFALATGTSGIR 297

Query:   288 PEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFP 339
              EA   AA+     L  A GA     +ARA+  GV      A  P   D+FP
Sbjct:   298 LEAD--AAID----LYAAAGAT----MARAIGRGVF-----AATPADNDLFP 334


^ = sptremblnew|CAE29254|CAE29254 Peptidase family
            T4.//:tremblnew|BX572605|BX572605_105 product: "Peptidase family
            T4";  Rhodopseudomonas palustris CGA009 complete genome; segment
            13/16 //:gp|BX572605|39650731 Peptidase family T4 [Rhodopseudomonas
            palustris CGA009]
            Length = 349

                        0         70       140       210       280         
                        |          |         |         |         |         |349
sptremblnew|CAE29254|  | __________________________________________________
Local hits (HSPs)      |    ______________________________________________

 Score = 574 (207.1 bits), Expect = 2.6e-55, P = 2.6e-55
 Identities = 146/347 (42%), Positives = 185/347 (53%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             N ITDV G+RVGH      D  L    A GVT +L     V ++D RGG PG R+  LL+
Sbjct:    18 NLITDVAGVRVGHAH----DHKL----ASGVTAILFDKPAVASIDVRGGGPGIRDGALLE 69

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
             P N+V  +D   L+GGSA+GL +  GV  WL E  RG A+ +  +PIVPGAV+FD+  GG
Sbjct:    70 PVNTVEQIDGFTLSGGSAFGLDSGGGVQAWLAERGRGFAIGNATIPIVPGAVVFDMINGG 129

Query:   122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
                W    P  D GY+A  AAG   A+G+VG G+GA    LKGG+G+ASAT   GVTVG 
Sbjct:   130 DKAWGRFSPYRDLGYAAADAAGDSFALGSVGAGLGATTATLKGGLGSASATTPGGVTVGA 189

Query:   178 LAVVNAAGNVVDPATGLPWMADLV--GEFA-LRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
             +AVVNA G+         W A     GEF  L  P +     L        A +   NTT
Sbjct:   190 IAVVNAIGSATIGDGPWFWSAPFEQDGEFGGLGMPESFTPDMLKVRLKGAAAASAIENTT 249

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
             +  +  DA L+    +R+A+ A  G AR I P H PLDGD VFA ATG   V P AG+  
Sbjct:   250 LVAVVTDANLTKPQVKRLAMLAQTGFARAIYPVHAPLDGDVVFAAATGVKPVEPLAGL-- 307

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVA---GIPTYRDMF 338
                      T +G  AA+ +ARA+  GV  A  +      P +RD F
Sbjct:   308 ---------TELGTIAANTVARAIARGVYEATALPFKDAQPAWRDRF 345


^ = sptrembl|Q92PJ5|Q92PJ5 Hypothetical protein
            R01755.//:trembl|AL591788|SME591788_110 gene: "SMc00512"; product:
            "CONSERVED HYPOTHETICAL PROTEIN";  Sinorhizobium meliloti 1021
            complete chromosome; segment 7/12 //:gp|AL591788|15074689 CONSERVED
            HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
            Length = 334

                        0         70        140       210       280        
                        |          |          |         |         |        |334
sptrembl|Q92PJ5|Q92PJ  | __________________________________________________
Local hits (HSPs)      |  _______________________________________________

 Score = 571 (206.1 bits), Expect = 5.5e-55, P = 5.5e-55
 Identities = 149/333 (44%), Positives = 186/333 (55%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             N ITDV G+ VG+ +    D  L +G    VT VL  P    AV   GGAPGTRETDLL 
Sbjct:     7 NLITDVPGLLVGNAE----DIRLKSG----VTAVLCDPPATAAVQVLGGAPGTRETDLLA 58

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
             P N+V+ VDA++L+GGSA+GL AA GV   L E  RG A+    VPIVP A++FDL  GG
Sbjct:    59 PHNTVQAVDAIVLSGGSAFGLDAASGVQAALREMGRGFAVGPHRVPIVPAAILFDLANGG 118

Query:   122 ---WN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGV 177
                W    P  D GY A  A   D   G+ G G GA     KGG+G+AS  L +G+TVG 
Sbjct:   119 DKDWGRYAPYRDLGYQAARAVSADFGTGSTGAGTGALTATFKGGLGSASTVLSNGITVGA 178

Query:   178 LAVVNAAGNVVDPATGLPWMA--DLVGEFA-LRAP-PAEQIAALAQLSSPLGAFNTPFNT 233
             L  VNA G+     T   W A  ++  EF  L  P P  Q AA  +        +   NT
Sbjct:   179 LVAVNAIGSATVGDTRHFWAAPFEMDDEFGGLGQPTPWPQDAAAPRFKFRERQASAT-NT 237

Query:   234 TIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVP 293
             TI VIA DA L+ A  +R+AIAAHDG +R + P+HTPLDGD VFAL+TG           
Sbjct:   238 TIAVIATDALLTKAEAKRLAIAAHDGFSRALWPSHTPLDGDLVFALSTGT---------- 287

Query:   294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQ 326
             +  +P  Q    + AAAA  +ARA+  GV +A+
Sbjct:   288 SGKAPLLQDFIDLSAAAAATMARAIARGVYDAR 320


^ = trembl|BX571866|BX571866_181 Photorhabdus luminescens subsp. laumondii TTO1
            complete genome; segment 8/17 //:gp|BX571866|36785582 unnamed
            protein product [Photorhabdus luminescens subsp. laumondii TTO1]
            Length = 325

                        0         70        140        210        280      
                        |          |          |          |          |      |325
trembl|BX571866|BX571  | __________________________________________________
Local hits (HSPs)      |  ________________________________________________

 Score = 557 (201.1 bits), Expect = 1.7e-53, P = 1.7e-53
 Identities = 142/343 (41%), Positives = 193/343 (56%)

Query:     3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
             +I DV G++VGH +  D     G    C  ++++   G V  VD RG APGTRET+LLDP
Sbjct:     7 TILDVPGVKVGHAE--DELQQTG----C--SIIIFDDGAVCGVDVRGSAPGTRETELLDP 58

Query:    63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
              N+V+ V+A++L+GGSA+GL +A GVMR+LEE ++G  +   VVPIVP A+IFDL  G  
Sbjct:    59 INTVQKVNAVVLSGGSAFGLDSASGVMRYLEERKKGFDVGVTVVPIVPAAIIFDLNFGDP 118

Query:   123 NCRPTADFGYSACAAAGVD-VAVGTVGVGVGARAG-------ALKGGVGTASATLQSGVT 174
               RP A  GY A   A V     G +G G GA  G       A+KGG+GTAS  L  G+T
Sbjct:   119 AVRPDAKMGYLAAQNASVTPFPSGNIGAGTGATIGKIAGFDKAMKGGLGTASVKLPDGLT 178

Query:   175 VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
             +G + VVNA G + DP  G      + G         + I  + + +     F    NTT
Sbjct:   179 IGAMVVVNAVGEIRDPKNG----KTIAGACDENGHLIDLIPYIIKNNKD-NNFTQGTNTT 233

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
             IG+I C+A ++ +  +++A  AHDGLARTI P HT  DGDT+FA ATG        GV +
Sbjct:   234 IGIICCNANMNKSQMKKVAQMAHDGLARTIYPVHTMSDGDTIFAAATG--------GVDS 285

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
             +       V  VG  AA+ +A AVL  V +A+   G+  Y D+
Sbjct:   286 S-------VNIVGILAAEVMAAAVLDAVKSAKSKFGVRGYADL 321


^ = sptrembl|Q8FWU6|Q8FWU6 Conserved hypothetical
            protein.//:trembl|AE014534|AE014534_9 gene: "BRA0349"; product:
            "conserved hypothetical protein";  Brucella suis 1330 chromosome II
            section 30 of 108 of the complete genome. //:gp|AE014534|23463695
            conserved hypothetical protein [Brucella suis 1330]
            Length = 368

                        0         80        160        240        320      
                        |          |          |          |          |      |368
sptrembl|Q8FWU6|Q8FWU  | __________________________________________________
Local hits (HSPs)      |      ___________________________________________

 Score = 554 (200.1 bits), Expect = 3.5e-53, P = 3.5e-53
 Identities = 149/347 (42%), Positives = 190/347 (54%)

Query:     3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
             SITDV GI++GH+               G +V+L   G    VD RG APGTRETDLLDP
Sbjct:    41 SITDVPGIKLGHHTLTRRPT--------GCSVLLCEEGATAGVDVRGSAPGTRETDLLDP 92

Query:    63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW 122
              N V+ V A+LL+GGSAYGLAAA GVMR+LEE+  G  +  GVVPIVP A++ DL VG +
Sbjct:    93 INFVQKVQAILLSGGSAYGLAAATGVMRYLEENNLGFEIGKGVVPIVPAAILMDLGVGDF 152

Query:   123 NCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQ-SGV 173
             + RP  + GY AC AA       G +G G GA  G       A+KGG+GTAS  +  + +
Sbjct:   153 SVRPDEEAGYLACKAATAAPSGEGNIGAGAGATVGKMFGMDYAMKGGLGTASYKVPGTEI 212

Query:   174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIA-ALAQLSSPLGAFNTP-F 231
              VG +  VNA G+V  P +       L G    R    +     +A +    G   +   
Sbjct:   213 VVGAIVAVNAVGDVRAPNSH----RILAGA---RTEDGKGFRNTMAAIMQGHGVVKSGGA 265

Query:   232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG 291
             NTTIG IA +A    A  ++IA  AHDG ARTI P HT  DGDT+FAL+TG  A   +A 
Sbjct:   266 NTTIGAIATNAPFGKAELKKIAGMAHDGFARTINPVHTMWDGDTIFALSTGK-AKDGQAD 324

Query:   292 VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIPTYRD 336
             V           TA+GA AA  +A AV   V+ A+  P   +P +RD
Sbjct:   325 V-----------TAIGAIAASVMADAVARAVVQAESLPHLNLPAHRD 360


^ = sptremblnew|CAE50384|CAE50384 Hypothetical
            protein.//:trembl|BX248359|BX248359_157 product: "Conserved
            hypothetical protein";  Corynebacterium diphtheriae gravis
            NCTC13129, complete genome; segment 6/8 //:gp|BX248359|38200688
            Conserved hypothetical protein [Corynebacterium diphtheriae]
            Length = 310

                        0          70         140        210        280    
                        |           |           |          |          |    |310
sptremblnew|CAE50384|  | __________________________________________________
Local hits (HSPs)      | _________________________________________________

 Score = 553 (199.7 bits), Expect = 4.4e-53, P = 4.4e-53
 Identities = 140/287 (48%), Positives = 172/287 (59%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
             M  + DV G+ VGH        SLG     G TVV+ P   +GAVD RGG PGTRETDLL
Sbjct:     1 MGGLIDVPGVLVGH-------RSLGD---TGCTVVVMPESAIGAVDVRGGGPGTRETDLL 50

Query:    61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPV 119
             +P N+V+ V A++L+GGSA+GLA ADGVMR L+    G  +  GV VPIVPGAVIFDL V
Sbjct:    51 EPHNTVQRVHAVVLSGGSAFGLATADGVMRALDSRGIGFPVPGGVSVPIVPGAVIFDLLV 110

Query:   120 GGWNCRPTADFGYSACAAA---GVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV- 175
             G    RPTA  G +A   A   G   AVG+VG G  A AG L+GG G AS      V   
Sbjct:   111 GDPYHRPTAADGEAAVRDAFDGGSAAAVGSVGAGCAATAGVLRGGFGQASQRAGDYVVAA 170

Query:   176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI 235
             GV+A  N  G+VVDP +G  W           A P  ++    +  S L    T  NTTI
Sbjct:   171 GVVA--NPVGSVVDPRSGRLW-----------ADPDVRVDC--EKFSQLKGLETKLNTTI 215

Query:   236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG 282
             GVIA DA ++ A  +R+A+  HDG+A  IRPAH+PLDGDT+FA++TG
Sbjct:   216 GVIATDAPVTKAQAQRLAMVGHDGIAVAIRPAHSPLDGDTLFAISTG 262

 Score = 215 (80.7 bits), Expect = 8.1e-16, P = 8.1e-16
 Identities = 80/240 (33%), Positives = 117/240 (48%)

Query:   100 AMDS-GVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARA-GA 157
             A+DS G+   VPG V   +  G           Y    AA  + AV     G  A A G+
Sbjct:    81 ALDSRGIGFPVPGGVSVPIVPGAVIFDLLVGDPYHRPTAADGEAAVRDAFDGGSAAAVGS 140

Query:   158 LKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFA------LRAPPA 211
             +  G    +  L+ G   G  +    AG+ V  A G+  +A+ VG         L A P 
Sbjct:   141 VGAGCAATAGVLRGGF--GQAS--QRAGDYV-VAAGV--VANPVGSVVDPRSGRLWADPD 193

Query:   212 EQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPL 271
              ++    +  S L    T  NTTIGVIA DA ++ A  +R+A+  HDG+A  IRPAH+PL
Sbjct:   194 VRVDC--EKFSQLKGLETKLNTTIGVIATDAPVTKAQAQRLAMVGHDGIAVAIRPAHSPL 251

Query:   272 DGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI 331
             DGDT+FA++TG       AGV      +   +  +  AAA+ +A+A+++ V+NA    G+
Sbjct:   252 DGDTLFAISTG-----DGAGV------DVDTLAQLSRAAAEVVAQAIVSAVVNATSAYGM 300


^ = sptrembl|Q8R934|Q8R934
            L-aminopeptidase/D-esterase.//:trembl|AE013132|AE013132_6 gene:
            "DmpA2"; product: "L-aminopeptidase/D-esterase";
            Thermoanaerobacter tengcongensis strain MB4T, section 159 of 244 of
            the complete genome. //:gp|AE013132|20516808
            L-aminopeptidase/D-esterase [Thermoanaerobacter tengcongensis]
            Length = 324

                        0         70        140        210        280      
                        |          |          |          |          |      |324
sptrembl|Q8R934|Q8R93  | __________________________________________________
Local hits (HSPs)      |  ________________________________________________

 Score = 538 (194.4 bits), Expect = 1.7e-51, P = 1.7e-51
 Identities = 139/345 (40%), Positives = 190/345 (55%)

Query:     4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
             I ++ GI+VG+ + ++      AG  C  TVV+   G    VD RGGAPGTRETDL+   
Sbjct:     8 IKEIEGIKVGNAENVE------AGTGC--TVVICEEGATPGVDVRGGAPGTRETDLIRSE 59

Query:    64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVGG 121
             N V  + A++LAGGSA+GL AA GVMR+LEE  +G+  D+GV  +PIV  A++FDL VG 
Sbjct:    60 NLVEKIHAVVLAGGSAFGLDAASGVMRYLEE--KGIGFDTGVLKIPIVASAILFDLAVGN 117

Query:   122 WNCRPTADFGYSACAAAGV-DVAVGTVGVGVGARAG-------ALKGGVGTASATLQSG- 172
                RP  + GY AC  A   +   G  G G GA  G       A+K G+G  +  LQ+G 
Sbjct:   118 PYIRPDFEMGYKACVNAEKGEFTYGNKGAGTGASVGKFLGIKRAMKSGLGCYA--LQAGE 175

Query:   173 VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFN 232
             + VG +  VNA G+V DP TG   +A L+ E   +    E+ A +  +      F    N
Sbjct:   176 LKVGAVVAVNALGDVFDPETG-EVIAGLLDEKGEKIISTEE-AIIENIGREKSVFRN--N 231

Query:   233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
             TTIGV+  +A LS A   ++A  AHDG AR I+P HT  DGDT+F +ATG V V P    
Sbjct:   232 TTIGVVITNAMLSKAEANKVASMAHDGYARAIKPVHTMFDGDTIFVMATGKVKVDP---- 287

Query:   293 PAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDM 337
                        T+VG  A   + RA++  V  A+   G+ +Y+D+
Sbjct:   288 -----------TSVGVLAVKAVERAIVRAVKEAESAYGLKSYKDL 321


^ = sptrembl|Q9A6A7|Q9A6A7 Hypothetical protein
            CC2187.//:trembl|AE005891|AE005891_1 gene: "CC2187"; product:
            "conserved hypothetical protein";  Caulobacter crescentus CB15
            section 217 of 359 of the complete genome. //:pironly|B87520|B87520
            conserved hypothetical protein CC2187 [imported] - Caulobacter
            crescentus//:gp|AE005891|13423688 conserved hypothetical protein
            [Caulobacter crescentus CB15]
            Length = 330

                        0         70        140        210       280       
                        |          |          |          |         |       |330
sptrembl|Q9A6A7|Q9A6A  | __________________________________________________
Local hits (HSPs)      |  ________________________________________________

 Score = 530 (191.6 bits), Expect = 1.2e-50, P = 1.2e-50
 Identities = 142/333 (42%), Positives = 176/333 (52%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             N ITDV G++VG  +    D ++  G    VTVVL P     AVD RGG P  RETD L 
Sbjct:     8 NLITDVPGLKVGCVE----DEAVRTG----VTVVLCPEAWTAAVDVRGGGPAVRETDTLR 59

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPV 119
             P NS     A+  +GGS +GL AADGV   L     G+ + +G   +PIVP A + DL  
Sbjct:    60 PENSFSKAHAICFSGGSVFGLGAADGVASALSNRDVGLRITAGTPAIPIVPAACLHDLSN 119

Query:   120 GG---WNCRPT-ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTV 175
             GG   W   P     G  A  AAG D  +G VG G GA AG   GG+G+AS  L  G+ V
Sbjct:   120 GGDKAWGLTPPYRALGMKAVEAAGEDFPLGPVGAGRGAMAGLRPGGLGSASLDLGDGLIV 179

Query:   176 GVLAVVNAAGN--VVDPATGLPWMADLVGEFALRAPP--AEQIAALAQLSSPLGA-FNTP 230
               L   N  G+  + D  T   W  ++ GEF  R P   A  I  L    S LGA     
Sbjct:   180 AALVAANPVGSAYMADGETFWAWPFEIDGEFGGRRPGTMAPAIEPLPD-DSKLGARLAAG 238

Query:   231 FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA 290
              NTT+ ++A  A LS A  +R+A+ AHDG+AR +RP HTP DGD VFALA+GA       
Sbjct:   239 ANTTLALVATTADLSTAEAQRMAMMAHDGMARAVRPCHTPFDGDVVFALASGAK------ 292

Query:   291 GVPAALSP-ETQLVTAVGAAAADCLARAVLAGV 322
               P    P  + L T +G+AAADCLARA+   V
Sbjct:   293 --PLGEDPMRSVLRTRIGSAAADCLARAMARAV 323


^ = sptrembl|Q83XN4|Q83XN4 Putative cysteine
            transferase.//:trembl|AJ421798|SCA421798_22 product: "putative
            cysteine transferase";  Streptomyces cattleya thienamycin gene
            cluster //:gp|AJ421798|30577697 putative cysteine transferase
            [Streptomyces cattleya]
            Length = 399

                        0         80       160       240       320         
                        |          |         |         |         |         |399
sptrembl|Q83XN4|Q83XN  | __________________________________________________
Local hits (HSPs)      |      _____________________________________________

 Score = 525 (189.9 bits), Expect = 4.1e-50, P = 4.1e-50
 Identities = 123/216 (56%), Positives = 137/216 (63%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG-TVGAVDCRGGAPGTRETDLL 60
             N +TDV G+RVGH  R       G GW  GVTVVL PPG  V AVD RGG PGTRETD L
Sbjct:    33 NGLTDVPGVRVGHAGRT------GDGWLTGVTVVLAPPGGAVAAVDVRGGGPGTRETDAL 86

Query:    61 DPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRG--VAMD-SGVVPIVPGAVIFDL 117
             DP N V+ +DA++L GGSA+GL AA GV  WLEE  RG  V  D S VVP+VP A +FDL
Sbjct:    87 DPRNLVQTIDAVVLTGGSAFGLDAAGGVAAWLEEQGRGFPVGADPSQVVPVVPAAALFDL 146

Query:   118 PVGG-WNCRPTADFGYSACAAA-----GVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
               GG W  RP A  G +A  AA     G  V  G VG G GA  G LKGG+GTAS  L S
Sbjct:   147 GRGGTWRARPDAALGRAAVEAAAARPEGDPVEQGGVGAGTGAVVGGLKGGIGTASVVLDS 206

Query:   172 GVTVGVLAVVNAAGNVVDPATGLPWMA--DLVGEFA 205
             G TV  LA VNAAG+ VDPATG+ + A   L GEFA
Sbjct:   207 GATVAALAAVNAAGSAVDPATGVLYGARTGLPGEFA 242

 Score = 349 (127.9 bits), Expect = 1.8e-31, P = 1.8e-31
 Identities = 101/230 (43%), Positives = 125/230 (54%)

Query:   133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPAT 192
             +A    G  V  G VG G GA  G LKGG+GTAS  L SG TV  LA VNAAG+ VDPAT
Sbjct:   168 AAARPEGDPVEQGGVGAGTGAVVGGLKGGIGTASVVLDSGATVAALAAVNAAGSAVDPAT 227

Query:   193 GLPWMA--DLVGEFALRAPP--------AEQIAALAQLSSPL-----GAFNTPFNTTIGV 237
             G+ + A   L GEFA    P        A   A LA+ +        G   T  NTT+ V
Sbjct:   228 GVLYGARTGLPGEFAGYGVPDAIGADTHARARARLAEAAEETARRRAGGAAT-LNTTLAV 286

Query:   238 IACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA-VAVP--PEAGVPA 294
             +A DA L+ A  +++A  AHDGLAR +RP H   DGDTVFAL+TG    +P  P+A    
Sbjct:   287 VATDATLTRAQAQKLAGTAHDGLARAVRPVHLLSDGDTVFALSTGRRPLLPDRPDATAAR 346

Query:   295 ALSP--ETQLVTAVGAAAADCLARAVLAGVLNAQPV---AGI-PTYRDMF 338
             A     E   +  V AA AD L RAV+  VL A  V    G+ P+YR+++
Sbjct:   347 AFGVHLEAGALNEVLAAGADVLTRAVVHAVLAATGVDTPGGVHPSYRELY 396


^ = sptrembl|Q8NMQ3|Q8NMQ3
            L-aminopeptidase/D-esterase.//:trembl|AP005281|AP005281_309 gene:
            "Cgl2513"; product: "L-aminopeptidase/D-esterase";  Corynebacterium
            glutamicum ATCC 13032 DNA, complete genome, section 8/10.
            //:gp|AP005281|21325284 L-aminopeptidase/D-esterase
            [Corynebacterium glutamicum ATCC 13032]
            Length = 320

                        0         70        140        210        280      
                        |          |          |          |          |      |320
sptrembl|Q8NMQ3|Q8NMQ  | __________________________________________________
Local hits (HSPs)      |   _______________________________________________

 Score = 512 (185.3 bits), Expect = 9.8e-49, P = 9.8e-49
 Identities = 130/283 (45%), Positives = 162/283 (57%)

Query:     4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
             + DV G  +GH  + D           G +VV+ P G    VD RGG PGTRETDLL+P 
Sbjct:    18 LIDVAGFLLGHVTKGDT----------GCSVVIAPNGAFAGVDVRGGGPGTRETDLLEPH 67

Query:    64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRG--VAMDSGVVPIVPGAVIFDLPVGG 121
             NSV+   A++L GGSA+GLAAADGVM  LE    G  V  +  +VPIVPGAVIFDL VG 
Sbjct:    68 NSVQQAHAVVLCGGSAFGLAAADGVMTALENRGIGFPVRPEGPIVPIVPGAVIFDLLVGD 127

Query:   122 WNCRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
                RPTA  G  A   A AG     G+VG G GA AG L+GG G +S  +    T+    
Sbjct:   128 PKNRPTAADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRVGK-YTIAAGV 186

Query:   180 VVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIA 239
             V N  G VVD  TG           AL   P      + +L S   A  T  NTTIGV+A
Sbjct:   187 VANPVGEVVDLTTG-----------ALFGRPEVMGVGVDKLKS---AAET-LNTTIGVVA 231

Query:   240 CDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG 282
              DA ++ A  +R+A+ AHDGLAR +RP+H+P+DGDT FA+++G
Sbjct:   232 TDAPVTKAQAKRLALVAHDGLARAVRPSHSPMDGDTFFAMSSG 274

 Score = 224 (83.9 bits), Expect = 6.2e-17, P = 6.2e-17
 Identities = 67/203 (33%), Positives = 103/203 (50%)

Query:   137 AAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPW 196
             AA  + AV     G    +G++  G G  +  L+ G       V          A  +  
Sbjct:   134 AADGEQAVENAFAGTHNGSGSVGAGTGATAGRLRGGFGQSSRRVGKYTIAAGVVANPVGE 193

Query:   197 MADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAA 256
             + DL    AL   P      + +L S   A  T  NTTIGV+A DA ++ A  +R+A+ A
Sbjct:   194 VVDLTTG-ALFGRPEVMGVGVDKLKS---AAET-LNTTIGVVATDAPVTKAQAKRLALVA 248

Query:   257 HDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLAR 316
             HDGLAR +RP+H+P+DGDT FA+++G       +GV    +P  +L   + A AADC+  
Sbjct:   249 HDGLARAVRPSHSPMDGDTFFAMSSG-----DGSGV----TP-VELAE-LSAHAADCVQD 297

Query:   317 AVLAGVLNAQPVAGIPTYRDMFP 339
             A++  +L A P  G+ ++R++ P
Sbjct:   298 AIIDAILTASPGLGLKSFRELLP 320


^ = sptrembl|Q8UCD3|Q8UCD3 Hypothetical protein
            Atu2565.//:trembl|AE008169|AE008169_5 gene: "AGR_C_4649"; product:
            "AGR_C_4649p";  Agrobacterium tumefaciens str. C58 circular
            chromosome, section 227 of 254 of the complete sequence.
            //:pironly|H97666|H97666 hypothetical 33.9K protein rv1333
            [imported] - Agrobacterium tumefaciens
            (strain//:gp|AE008169|15157757 AGR_C_4649p [Agrobacterium
            tumefaciens str. C58 (Cereon)]
            Length = 355

                        0          80         160        240        320    
                        |           |           |          |          |    |355
sptrembl|Q8UCD3|Q8UCD  | __________________________________________________
Local hits (HSPs)      |     ______________________________________________

 Score = 508 (183.9 bits), Expect = 2.6e-48, P = 2.6e-48
 Identities = 146/351 (41%), Positives = 183/351 (52%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             N +TD+ GI VG+      D SLG+G    VT ++     V +    GGAPG R+T LLD
Sbjct:    27 NLLTDIDGILVGNVT----DLSLGSG----VTAIVFEKPAVASGSVLGGAPGGRDTGLLD 78

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
             P+ +V  VDAL+L+GGSA+GL AA GV   L E  RG+ + S  VPIVP A++ D+  GG
Sbjct:    79 PSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGG 138

Query:   122 ---WNCR-PTADFGYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG 176
                W    P  + GY+A  AAG D   +GT G G GA     KGG+G+ASA    G  V 
Sbjct:   139 NKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVA 198

Query:   177 VLAVVNAAGNVVDPATGLPWMA--DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
              +  VNA G+     +   W A  ++ GEF     PA   A    L   L   N    TT
Sbjct:   199 AIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALR--LKGVNLTA-TT 255

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
             IG +  DA L+ A   R++I AHDGLAR + PAH P DGDT+FA ATG    P E G  A
Sbjct:   256 IGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATGDK--PQEGG--A 311

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQ--PVAGIP-TYRDMFPGAF 342
               +    L T V       +ARAV  GV  A   PV G    YRD+    F
Sbjct:   312 HFAELCYLATIV-------MARAVARGVYEATALPVDGAQRAYRDIHGRGF 355


^ = sptrembl|Q8XKH3|Q8XKH3 Hypothetical protein
            CPE1422.//:trembl|AP003190|AP003190_142 gene: "CPE1422"; product:
            "conserved hypothetical protein";  Clostridium perfringens str. 13
            DNA, complete genome, section 6/10. //:gp|AP003190|18145084
            conserved hypothetical protein [Clostridium perfringens str. 13]
            Length = 325

                        0         70        140        210        280      
                        |          |          |          |          |      |325
sptrembl|Q8XKH3|Q8XKH  | __________________________________________________
Local hits (HSPs)      | ______________________________________________

 Score = 468 (169.8 bits), Expect = 4.5e-44, P = 4.5e-44
 Identities = 129/319 (40%), Positives = 170/319 (53%)

Query:     4 ITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA 63
             ITD+ G ++GH Q  +     G   A G TV+L   G  G VD RGGAPGTRETDLL+P 
Sbjct:     6 ITDIDGFKLGHAQDFE-----G---ATGCTVLLCEEGASGGVDVRGGAPGTRETDLLNPM 57

Query:    64 NSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV--VPIVPGAVIFDLPVGG 121
               V  V A++L+GGSA+GL +  GVM +LE   + V  D GV  VPIV GAV+FDL  G 
Sbjct:    58 EMVDKVHAIVLSGGSAFGLDSCSGVMEYLEN--KNVGFDVGVAKVPIVCGAVLFDLACGN 115

Query:   122 WNCRPTADFGYSAC--AAAGVDVAVGTVGVGVGARAG-------ALKGGVGTASATLQSG 172
                RP  + G  AC  +   +D   G +G G GA  G       A+KGG G  S  +Q G
Sbjct:   116 PKIRPNKEMGLEACKNSETYLDSKNGNIGCGTGATVGKALNQKLAMKGGFG--SYAVQVG 173

Query:   173 -VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPF 231
              + VG +  VN+ G++VDP      +A  + +        E+ + LA  S+P   F    
Sbjct:   174 DLKVGAIVGVNSLGDIVDPNNNNKIIAGGLSQDRNSFINIEE-SLLANYSNPKNVFKG-- 230

Query:   232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA- 290
             NTTIG I  +   + A   +IA  A +G  RTIRPAHT  DGDT+F L++  V       
Sbjct:   231 NTTIGCIVTNGDFNKAEANKIASMAQNGFGRTIRPAHTMFDGDTIFTLSSNKVKADINVV 290

Query:   291 GVPAALSPETQLVTAVGAA 309
             G+ AA   E  ++ AV  A
Sbjct:   291 GLLAAQVMEKAIIKAVKEA 309


^ = sptrembl|Q9RW87|Q9RW87 Hypothetical protein
            DR0782.//:trembl|AE001933|AE001933_5 gene: "DR0782"; product:
            "conserved hypothetical protein";  Deinococcus radiodurans R1
            section 70 of 229 of the complete chromosome 1.
            //:pironly|B75476|B75476 conserved hypothetical protein -
            Deinococcus radiodurans (strain R1)//:gp|AE001933|6458494 conserved
            hypothetical protein [Deinococcus radiodurans] [Deinococcus
            radiodurans R1]
            Length = 310

                        0          70         140        210        280    
                        |           |           |          |          |    |310
sptrembl|Q9RW87|Q9RW8  | __________________________________________________
Local hits (HSPs)      |    __________________________________________

 Score = 434 (157.8 bits), Expect = 1.8e-40, P = 1.8e-40
 Identities = 129/293 (44%), Positives = 161/293 (54%)

Query:     3 SITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDP 62
             ++T + G +VGH+   DP A  G    C V V+ PP G V +    G +P TRE  LL P
Sbjct:    17 TLTAIPGFQVGHWT--DPLAQTG----CTV-VLCPPEGAVASASFIGPSPATREGVLLSP 69

Query:    63 ANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDS--GVVPIVPGAVIFDLPVG 120
                V  V ALLL GGSA+GLAAA GV+R LEE  RG+  ++  G VPIVP AVI+DL VG
Sbjct:    70 EKKVERVHALLLTGGSAFGLAAATGVVRVLEE--RGIGHETAFGRVPIVPAAVIYDLGVG 127

Query:   121 GWNCRPTADFGYSAC-AAAGVDVAVGTVGVGVGARAGA-LKGGV--GTASATLQ-SGVTV 175
                 RP    G +A  AA+   V  G VG G GA AG  L GGV  G  S  L+ SGV V
Sbjct:   128 NPRVRPGEIEGEAAARAASSAPVERGQVGAGTGATAGKYLGGGVPGGLGSVCLERSGVRV 187

Query:   176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI 235
               LAVVN  G+V+D   G+           L  P    +AA     +P G      NTT+
Sbjct:   188 AALAVVNPVGDVLDERGGV-----------LAGPGTGPVAAAF---TP-GDVE---NTTL 229

Query:   236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
               +A + AL+ A CRR+A AA   LAR I P+HT  DGD+ F L++ A+  PP
Sbjct:   230 VAVATEHALTKAECRRLADAAQTALARVIHPSHTAWDGDSAFVLSSAAL--PP 280


^ = sptrembl|Q97Y10|Q97Y10 Hypothetical protein
            SSO1540.//:trembl|AE006768|AE006768_8 gene: "SSO1540"; product:
            "Conserved hypothetical protein";  Sulfolobus solfataricus section
            127 of 272 of the complete genome. //:pironly|B90313|B90313
            conserved hypothetical protein [imported] - Sulfolobus
            solfataricus//:gp|AE006768|13814773 Conserved hypothetical protein
            [Sulfolobus solfataricus]
            Length = 282

                        0         60        120        180       240       
                        |          |          |          |         |       |282
sptrembl|Q97Y10|Q97Y1  | __________________________________________________
Local hits (HSPs)      | _________________________________________________

 Score = 218 (81.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
 Identities = 69/213 (32%), Positives = 103/213 (48%)

Query:     7 VGGIRVGHYQRLDPDASLGAGWACGVTVVLPP-PGTVGAVDCRGGAPGTRETDLLDPAN- 64
             + GI+VG Y   D  +        GVTV+L         +  RGG+P T  TDLL P + 
Sbjct:     5 INGIKVGGYT--DEKSK------SGVTVILSEIENNTAGISQRGGSPATLGTDLLRPKHR 56

Query:    65 SVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPVGGWN 123
               + V+A++L G S +G+   D V+  L E   G  +   + +PIV  A IFD       
Sbjct:    57 GNQSVNAIVLTGRSVFGIRVVDAVLMKLFELGVGFKISQNLKIPIVVSASIFDFYDN--T 114

Query:   124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-------SGVTVG 176
               PT D+GY+A +  G D+ +G    G GA  G LKG +  A  + Q       + + +G
Sbjct:   115 IMPTPDWGYNAMSNLGYDIPIGRYWAGRGATVGKLKG-IKYAKPSGQGYYEIENNNLKIG 173

Query:   177 VLAVVNAAGNVVDPATGLPWMADLVGEFALRAP 209
             V++VVN+ GN+ D    L  + +   EF +  P
Sbjct:   174 VISVVNSIGNIYDEKGEL-LVGEETEEFKINTP 205

 Score = 123 (48.4 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
 Identities = 26/79 (32%), Positives = 45/79 (56%)

Query:   228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
             NTP  TT+GV+  ++ L+ +   R+A +A +G +  I+P +  LDGDTVF +AT  + VP
Sbjct:   203 NTP-GTTLGVVITNSKLNNSDACRVASSAENGFSSVIKPYNLSLDGDTVFTIATNEMEVP 261

Query:   288 PEAGVPAALSPETQLVTAV 306
              +  +        + V ++
Sbjct:   262 VDKVIALTYEASRESVLSI 280


^ = sptrembl|Q57326|Q57326 Endo-type 6-aminohexanoate OLIGOMER
            hydrolase.//:trembl|D10686|FSNYLC_1 gene: "nylC"; product:
            "endotype 6-aminohexanoate-oligomer hydrolase";  Flavobacterium sp.
            plasmid pOAD2 gene for endotype 6-aminohexanoat-oligomer hydrolase,
            complete cds. //:trembl|D26094|PPPOAD2_2 gene: "nylC"; product:
            "endo-type 6-aminohexanoate oligomer hydrolase";  Flavobacterium
            sp. plasmid pOAD2 DNA, whole sequence. //:pironly|A47039|A47039
            nylon oligomer-degrading enzyme EIII nylC - Flavobacterium
            sp.//:gp|D10686|216839 endotype 6-aminohexanoate-oligomer hydrolase
            [Flavobacterium sp.]//:gp|D26094|488341 endo-type 6-aminohexanoate
            oligomer hydrolase [Flavobacterium sp.]
            Length = 355

                        0          80         160        240        320    
                        |           |           |          |          |    |355
sptrembl|Q57326|Q5732  | __________________________________________________
Local hits (HSPs)      |      ____________________________________________

 Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 114/345 (33%), Positives = 155/345 (44%)

Query:     2 NSITDVGGIR-VGHYQ-RLD-PDASLGAGW----ACGVTVVLPPPGTVGAVDCRGGAPGT 54
             N   D+  +R  G    R D P  S+GA        G TV+  P G   AVD RGGA G 
Sbjct:    35 NDAFDLAPVRSTGREMLRFDFPGVSIGAAHYEEGPTGATVIHIPAGARTAVDARGGAVGL 94

Query:    55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVM-RWLE--EHRRGVAMDSGVVPIVPG 111
                     +    F  A+ LAGG+ YGL A  GV    LE  EHR G A     + +V  
Sbjct:    95 --------SGGYDFNHAICLAGGAGYGLEAGAGVSDALLERLEHRTGFAE----LQLVSS 142

Query:   112 AVIFDLPVGGWNCRPTADFGYSACAAAGVDVAV------GTVGVGVGARAGALKGG---- 161
             AVI+D     ++ R TA +   A   A ++ AV      G  G G+ A AG +       
Sbjct:   143 AVIYD-----FSARSTAVYPDKALGRAALEFAVPGEFPQGRAGAGMSASAGKVDWDRTEI 197

Query:   162 VGTASATLQSGVTVGVLAVV--NAAGNVVDPATGLPWMADLVGEFALRAPPA-EQIAALA 218
              G  +A  + G  V +LAVV  N  G +VD A G     +   +  +R  P  +   A A
Sbjct:   198 TGQGAAFRRLG-DVRILAVVVPNPVGVIVDRA-GTVVRGNYDAQTGVRRHPVFDYQEAFA 255

Query:   219 QLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFA 278
             +   P+       NTTI  I  +  +SP    + A   H  + R I+P HT +DGDT+FA
Sbjct:   256 EQVPPVTEAG---NTTISAIVTNVRMSPVELNQFAKQVHSSMHRGIQPFHTDMDGDTLFA 312

Query:   279 LATGAVAVPPEAGVPAA-LSPETQLVTAVGAAAADCLARAVL-AG 321
             + T  + +P   G     LS      TA+GA A++ +  AVL AG
Sbjct:   313 VTTDEIDLPTTPGSSRGRLSVNA---TALGAIASEVMWDAVLEAG 354


^ = sptrembl|Q9I3M6|Q9I3M6 Hypothetical protein
            PA1486.//:trembl|AE004577|AE004577_10 product: "hypothetical
            protein";  Pseudomonas aeruginosa PAO1, section 138 of 529 of the
            complete genome. //:pironly|G83460|G83460 hypothetical protein
            PA1486 [imported] - Pseudomonas aeruginosa (strain
            PAO1)//:gp|AE004577|9947440 hypothetical protein PA1486
            [Pseudomonas aeruginosa PAO1]
            Length = 366

                        0         80        160        240        320      
                        |          |          |          |          |      |366
sptrembl|Q9I3M6|Q9I3M  | __________________________________________________
Local hits (HSPs)      |   __________________________________________

 Score = 192 (72.6 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 102/339 (30%), Positives = 139/339 (41%)

Query:     2 NSITDVGGIRVGHY---QRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETD 58
             N+ITDV G+RVGH    QR+D     G     GVT+V P  G      C  G        
Sbjct:    19 NAITDVPGVRVGHSTLNQRID-----GRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNG 73

Query:    59 LLDPANSVRFV-DALLLAGGSAYGLAAADGVMR--WLEEHRRGVAMDSGVVPIVPGAV-I 114
                 A  + ++ +A LL    A     + G +R   + E R  +  DSG+   +P  +  
Sbjct:    74 ---DATGLEWIREAGLLTTPIAITNTHSVGAVRDALIAEERAELG-DSGLYWCMPVVMET 129

Query:   115 FDLPVGG-WNCRPTA-DFGYS-ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATL-- 169
             FD  +   W     A   G + ACA +G  V  G+VG G G      KGG+G+AS  L  
Sbjct:   130 FDGLLNDIWGQHVGARQVGEALACAESG-PVREGSVGGGTGMICHEFKGGIGSASRRLPA 188

Query:   170 -QSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
              Q G TVG L   N          G P     VG              L  + SP     
Sbjct:   189 EQGGWTVGALVQANHGQRRELRVDGYP-----VGR------------RLGDIPSPFSEEG 231

Query:   229 TP-FNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVP 287
             TP   + + ++A DA L P  C+R+A  A  G+ART         GD   A ATG   +P
Sbjct:   232 TPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDS-SGDVFLAFATGNQDLP 290

Query:   288 PEAGVPAALSPETQL-------VTAVGAAAADCLARAVL 319
             P       L   T L       ++ + AAAA+ +  A++
Sbjct:   291 PADYARKDLPQSTPLRMLNNDHISPLFAAAAEAVEEAIV 329


^ = sptrembl|Q8XZL2|Q8XZL2 Probable D-aminopeptidase protein (EC
            3.4.11.-).//:trembl|AL646064|AL646064_58 gene: "RSc1383";
            "RS04666"; product: "PROBABLE D-AMINOPEPTIDASE PROTEIN";  Ralstonia
            solanacearum GMI1000 chromosome, complete sequence; segment 8/19
            //:gp|AL646064|17428398 PROBABLE D-AMINOPEPTIDASE PROTEIN
            [Ralstonia solanacearum]
            Length = 341

                        0         70        140       210       280        
                        |          |          |         |         |        |341
sptrembl|Q8XZL2|Q8XZL  | __________________________________________________
Local hits (HSPs)      |    _____________________________________________

 Score = 178 (67.7 bits), Expect = 7.3e-11, P = 7.3e-11
 Identities = 110/347 (31%), Positives = 145/347 (41%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWA-CGVTVVLPPPGT--VGAVD--CRGGAPGTRE 56
             NSITDV GI VGH       A+L  G    GVTVV P  G   +  V   C       + 
Sbjct:    17 NSITDVAGITVGH-------ATLAGGSIQTGVTVVRPHAGDPFLDKVPAACAVLNGFGKS 69

Query:    57 TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRR-GVAMDSGVVPIVPGAVIF 115
               LL           + L    A G  A   V + +E H + G A  + V P+V     F
Sbjct:    70 VGLLQVEELGVLETPIALTNTFAVGDVARAQVQQAVEAHPQIGRAWPT-VNPLV-----F 123

Query:   116 DLPVGGWNCRPT---ADFGY-SACAAAGVDVAVGTVGVGVGARAGALKGGVGTAS--ATL 169
             +   G  N   +    D  Y +AC AAG   A G VG G G  A  +KGG+G+AS    L
Sbjct:   124 ECNDGYLNDLQSFAVRDLHYYAACLAAGGAFAQGAVGAGRGMSAFGVKGGLGSASRVVAL 183

Query:   170 QSGV--TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF 227
             + G   TVG L + N          G    AD+    A  AP  E+              
Sbjct:   184 EDGTRRTVGALVLANFGVTANLTLAGRRIGADIARVLAEDAPGPEK-------------- 229

Query:   228 NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRP-AHTPLDGDTVFALATGAVAV 286
                  + I ++A DA L     RR+A+ A  GLART     H    GD   A +T A  V
Sbjct:   230 ----GSIIMLLATDAPLDARQLRRVALRAGAGLARTGSVFGHG--SGDIALAFST-AYTV 282

Query:   287 PPEAG--VPA-ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
             P      +PA A++ ET L   +  AAAD + +A++  +  A+ V G
Sbjct:   283 PHLGARPMPAVAMTHETHL-DPLFQAAADSVEQAIVHALFYAETVTG 328


^ = sptrembl|Q88G81|Q88G81 D-aminopeptidase
            putative.//:trembl|AE016788|AE016788_136 product: "D-aminopeptidase
            putative";  Pseudomonas putida KT2440 section 15 of 21 of the
            complete genome. //:gp|AE016788|24985528 D-aminopeptidase putative
            [Pseudomonas putida KT2440]
            Length = 377

                        0         80        160        240       320       
                        |          |          |          |         |       |377
sptrembl|Q88G81|Q88G8  | __________________________________________________
Local hits (HSPs)      |     ___________________________________________

 Score = 153 (58.9 bits), Expect = 7.4e-08, P = 7.4e-08
 Identities = 96/348 (27%), Positives = 138/348 (39%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
             +N+ITDV G+RVGH       A+ G     GVT++ P  G+     C  G          
Sbjct:    24 LNAITDVPGVRVGHSNVRGRTAN-GRDILTGVTIIEPRVGSTSQQPCFAGVHVLNGNG-- 80

Query:    61 DPANSVRFV-DALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVV----PIVPGAVI 114
               A  + ++ +A LL    A+    + GV+R  L    R    D G +    P+V     
Sbjct:    81 -DATGLEWIREAGLLTSPIAFTNTHSLGVVRDALIVLDREQQPDDGRIYWNMPVVLETYD 139

Query:   115 FDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
               L  + G++ +        + A  G  V  G VG G G      KGG+GTAS  L S  
Sbjct:   140 GLLNDINGFHVKHEHVAEALSNAVIG-PVIEGAVGGGSGMICHEFKGGIGTASRRLSS-- 196

Query:   174 TVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT 233
             T G   V    G +V    G+        E  +   P  +   + Q  SP    + P   
Sbjct:   197 TQGSWTV----GAIVQANHGIR------NELRVDGYPVGRY--MEQADSPFLKASLPHPG 244

Query:   234 TIGVIAC---DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEA 290
                ++ C   DA L P  C R+A  A  GLART    +    GD   A +TG   VPP A
Sbjct:   245 MGSIVVCLATDAPLLPHQCTRLAQRASIGLART-GGGNEDHSGDIFIAFSTGN-HVPP-A 301

Query:   291 GVPAALSPETQLVTAVG--------AAAADCLARAVLAGVLNAQPVAG 330
                +  +P T  ++ V          AA + +  A++  +L A    G
Sbjct:   302 AYESKRAPTTDNLSMVNNDHISELFLAATEAVEEAIINALLAADTAEG 349


^ = sptrembl|Q9V2J0|Q9V2J0 D-aminopeptidase.//:trembl|AJ248283|CNSPAX01_85
            product: "D-aminopeptidase (EC 3.4.11.19)";  Pyrococcus abyssi
            complete genome; segment 1/6 //:pironly|A75195|A75195
            d-aminopeptidase. PAB0045 - Pyrococcus abyssi (strain
            Orsay)//:gp|AJ248283|5457517 D-aminopeptidase (EC 3.4.11.19)
            [Pyrococcus abyssi]
            Length = 361

                        0          80        160        240        320     
                        |           |          |          |          |     |361
sptrembl|Q9V2J0|Q9V2J  | __________________________________________________
Local hits (HSPs)      |    __________________________     _____________

 Score = 117 (46.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 53/193 (27%), Positives = 84/193 (43%)

Query:     2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PG-T 54
             N I+DV G++VGH   +     L  G G    GVTV+LP  G +      GGA    G +
Sbjct:    19 NKISDVKGVKVGHVTLIRGKGKLIPGKGPVRTGVTVILPHEGNIYKEKVLGGAFVMNGYS 78

Query:    55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAV 113
             +   L+           ++L    + G  A DG++ ++      + + +G V P+V    
Sbjct:    79 KPVGLVQLWELGTIETPIVLTNTLSIG-TAVDGLLDYVLSENEDIGVTTGSVNPLVLECN 137

Query:   114 IFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-S 171
                L  + G + +   +    A   A  D   G VG G G  A   KGG+G++S  ++  
Sbjct:   138 DSYLNDIRGRHVK--REHVVEAIKNAKEDFEEGAVGSGTGMSAFEFKGGIGSSSRIVKIE 195

Query:   172 G--VTVGVLAVVN 182
             G   T+G L + N
Sbjct:   196 GRSYTIGALVMTN 208

 Score = 77 (32.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 28/96 (29%), Positives = 45/96 (46%)

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
             I +IA DA L+     R+A  A  GLART   A+    GD   A +T       E  +  
Sbjct:   241 IMIIATDAPLTSRQLNRLAKRAVVGLARTGGYAYNG-SGDIAVAFSTANKIKHYEKDIME 299

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
               +    L++ +  AAA+ +  A++  +L A+ + G
Sbjct:   300 IKALPDSLLSPLFKAAAEAVEEAIINSLLEAKTMDG 335


^ = sptrembl|Q7WD69|Q7WD69 Probable D-aminopeptidase (EC
            3.4.11.19).//:sptrembl|Q7VW73|Q7VW73 Probable
            D-aminopeptidase.//:trembl|BX640418|BX640418_85 product: "probable
            D-aminopeptidase";  Bordetella pertussis strain Tohama I, complete
            genome; segment 8/12 //:trembl|BX640448|BX640448_108 product:
            "probable D-aminopeptidase";  Bordetella bronchiseptica strain
            RB50, complete genome; segment 12/16 //:gp|BX640418|33572737
            probable D-aminopeptidase [Bordetella pertussis] [Bordetella
            pertussis Tohama I]//:gp|BX640448|33577126 probable
            D-aminopeptidase [Bordetella bronchiseptica] [Bordetella
            bronchiseptica RB50]
            Length = 382

                        0         80        160       240       320        
                        |          |          |         |         |        |382
sptrembl|Q7WD69|Q7WD6  | __________________________________________________
Local hits (HSPs)      |       ____               ______________________

 Score = 138 (53.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 57/193 (29%), Positives = 87/193 (45%)

Query:   145 GTVGVGVGARAGALKGGVGTASATLQS--G--VTVGVLAVVNAAGNVVDPATGLPWMADL 200
             G+VG G G  +   KGG+G+AS   ++  G   TVG L + N          G P+    
Sbjct:   184 GSVGAGRGMSSFGFKGGIGSASRLAEAYPGQRYTVGALVLSNFGQRSSMTIAGRPF---- 239

Query:   201 VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGL 260
                         ++AA A+   P G       + I ++A DA L     RR+++ A  GL
Sbjct:   240 ----------GRRLAAAARDGEPAG--QPEKGSIILLLATDAPLDSRQLRRLSLRAGAGL 287

Query:   261 ARTIRP-AHTPLDGDTVFALATGAVAVP--PEAGVPAALSPETQLVTAVGAAAADCLARA 317
             ART     H    GD   A +T A  +P   E G+P  +      + A+  AAA+ + +A
Sbjct:   288 ARTGSVFGHG--SGDIALAFST-AYTIPHLAERGMPVQVMLHETRIDALFEAAAEAVEQA 344

Query:   318 VLAGVLNAQPVAG 330
             ++A +  A+ VAG
Sbjct:   345 IVAALWRAETVAG 357

 Score = 54 (24.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 17/40 (42%), Positives = 22/40 (55%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPG 40
             ++SI DV G+ VGH+       + GA    GVTVV P  G
Sbjct:    43 LDSIGDVPGVTVGHFT-----LAQGARQT-GVTVVRPHEG 76


^ = sptrembl|O57784|O57784 361AA long hypothetical
            D-aminopeptidase.//:trembl|AP000001|AP000001_82 gene: "PH0078";
            product: "361aa long hypothetical D-aminopeptidase";  Pyrococcus
            horikoshii OT3 genomic DNA, 1-287000 nt. position (1/7).
            //:pironly|D71227|D71227 probable D-aminopeptidase - Pyrococcus
            horikoshii//:gp|AP000001|3256464 361aa long hypothetical
            D-aminopeptidase [Pyrococcus horikoshii]
            Length = 361

                        0          80        160        240        320     
                        |           |          |          |          |     |361
sptrembl|O57784|O5778  | __________________________________________________
Local hits (HSPs)      |    __________________________     _____________

 Score = 123 (48.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 54/193 (27%), Positives = 83/193 (43%)

Query:     2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PG-T 54
             N ITDV G++VGH   +     L  G G    GVT +LP  G +       GA    G +
Sbjct:    19 NKITDVKGVKVGHVTLIKGKGKLIPGKGPVRTGVTAILPHEGNIYKEKVLAGAFVMNGYS 78

Query:    55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAV 113
             +   L+           ++L    + G  A +G++ ++ E    + + +G V P+V    
Sbjct:    79 KPVGLIQLWELGTIETPIILTNTLSIG-TAVEGLLDYILEENEDIGVTTGSVNPLVLECN 137

Query:   114 IFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-S 171
                L  + G + +   +    A   A  D   G VG G G  A   KGG+G+AS  ++  
Sbjct:   138 DSYLNDIRGRHVK--REHVVEAIKRADEDFEEGAVGAGTGMSAFEFKGGIGSASRIVEIE 195

Query:   172 G--VTVGVLAVVN 182
             G   TVG L + N
Sbjct:   196 GKKYTVGALVLSN 208

 Score = 70 (29.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 27/96 (28%), Positives = 44/96 (45%)

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
             I +IA DA L+     R+A  A  GLART   A+    GD   A +T       E  V  
Sbjct:   241 IMIIATDAPLTGRQLNRVAKRAIVGLARTGGYAYNG-SGDIAVAFSTANRIKHYEKEVIE 299

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
               +    +++ +  A A+ +  A++  +L A+ + G
Sbjct:   300 IKALPDSVISPLFKATAEAVEEAIINSLLEARTMDG 335


^ = sptrembl|Q8TZR1|Q8TZR1 D-aminopeptidase.//:trembl|AE010286|AE010286_8 gene:
            "PF1924"; product: "d-aminopeptidase";  Pyrococcus furiosus DSM
            3638, section 161 of 173 of the complete genome.
            //:gp|AE010286|18894120 d-aminopeptidase [Pyrococcus furiosus DSM
            3638]
            Length = 361

                        0          80        160        240        320     
                        |           |          |          |          |     |361
sptrembl|Q8TZR1|Q8TZR  | __________________________________________________
Local hits (HSPs)      |    __________________________     _____________

 Score = 118 (46.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 53/193 (27%), Positives = 84/193 (43%)

Query:     2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PG-T 54
             NSI+DV G++VGH   +     L  G G    GVT +LP  G +       GA    G +
Sbjct:    19 NSISDVKGVKVGHVTLIKGRGKLIPGKGPVRTGVTAILPHDGNIYKEKVLAGAFVMNGYS 78

Query:    55 RETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAV 113
             +   L+           ++L    + G  A DG++ ++      + + +G V P+V    
Sbjct:    79 KPVGLVQLWELGTIETPIILTNTLSIG-TAIDGLLDYVLRENEDIGVTTGSVNPLVLECN 137

Query:   114 IFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-S 171
                L  + G + +   +    A  +A  D   G VG G G  A   KGG+G++S  ++  
Sbjct:   138 DSYLNDIRGRHVK--REHVVEAIESASKDFEEGAVGAGTGMSAFEFKGGIGSSSRIVEVE 195

Query:   172 G--VTVGVLAVVN 182
             G   TVG L + N
Sbjct:   196 GKKYTVGALVLSN 208

 Score = 73 (30.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
 Identities = 27/97 (27%), Positives = 47/97 (48%)

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEAGVP 293
             I ++A DA L+     R+A  A  GLART   A+    GD V A +T   +    +  + 
Sbjct:   241 IMIVATDAPLTARQLNRLAKRAVVGLARTGGYAYNG-SGDVVVAFSTANKIKHYEKQEIS 299

Query:   294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
                 P++ L + +  A A+ +  A++  +L A+ + G
Sbjct:   300 IRALPDSVL-SPIFKATAEAVEEAIINSLLQAKTMDG 335


^ = sptrembl|Q8RAV6|Q8RAV6
            L-aminopeptidase/D-esterase.//:trembl|AE013072|AE013072_5 gene:
            "DmpA"; product: "L-aminopeptidase/D-esterase";  Thermoanaerobacter
            tengcongensis strain MB4T, section 99 of 244 of the complete
            genome. //:gp|AE013072|20516090 L-aminopeptidase/D-esterase
            [Thermoanaerobacter tengcongensis]
            Length = 364

                        0         80        160        240        320      
                        |          |          |          |          |      |364
sptrembl|Q8RAV6|Q8RAV  | __________________________________________________
Local hits (HSPs)      |   ____________________________________________

 Score = 148 (57.2 bits), Expect = 2.6e-07, P = 2.6e-07
 Identities = 88/346 (25%), Positives = 139/346 (40%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGA----VDCRGGAPG 53
             +N+ITDV G+ VGH   +  +  L  G G    GVT ++P  G +        C  G   
Sbjct:    20 LNAITDVEGVTVGHVTLISGEGKLIPGKGPVRTGVTAIVPHSGNIFKEKLIASCYVGNGF 79

Query:    54 TRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGA 112
              +   L+           ++L    + G  AADG++ ++      + + +G V P+V   
Sbjct:    80 GKSIGLIQVKELGTLETPIILTNTLSVG-TAADGLIEYMLSFNEDIGITTGTVNPVVLEC 138

Query:   113 VIFDL-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS 171
                 L  + G + +   +   +A  +A  +   G+VG G G      KGG+GTAS  ++ 
Sbjct:   139 NDGYLNDIRGRHVKK--EHVIAAIKSAKNEFETGSVGAGTGMICHGFKGGIGTASRRIEI 196

Query:   172 G---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFN 228
             G    TVGVL + N  G + D    L +    VG   L+    E+I    +      A  
Sbjct:   197 GGKVYTVGVLLLTNY-GRMED----LIFNGKNVGRM-LK----EEIKKGKE------AAK 240

Query:   229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP 288
                 + I VIA DA +      R+A     GLA+T         GD   A +T       
Sbjct:   241 EDQGSCIIVIATDAPMDAHGLERVAKRGVLGLAKTGSFMGNG-SGDIAIAFSTANKIC-- 297

Query:   289 EAGVPA----ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
               G P      +SP +  +  V  A  + +  AV   +  A+ + G
Sbjct:   298 HYGEPVMEIKTISPHSGDINKVFQAVVEAVEEAVWDSMFTAERIVG 343


^ = sptrembl|Q8UCH7|Q8UCH7 Aminopeptidase.//:trembl|AE008163|AE008163_9 gene:
            "AGR_C_4562"; product: "AGR_C_4562p";  Agrobacterium tumefaciens
            str. C58 circular chromosome, section 221 of 254 of the complete
            sequence. //:trembl|AE009197|AE009197_9 gene: "Atu2510"; product:
            "aminopeptidase";  Agrobacterium tumefaciens strain C58 circular
            chromosome, section 223 of 256 of the complete sequence.
            //:pironly|AC2885|AC2885 aminopeptidase Atu2510 [imported] -
            Agrobacterium tumefaciens (strain C58,
            Dupon//:pironly|H97660|H97660 D-aminopeptidase (PAB0045) (strain
            orsay) [imported] - Agrobacterium
            tumefaciens//:gp|AE008163|15157697 AGR_C_4562p [Agrobacterium
            tumefaciens str. C58 (Cereon)]//:gp|AE009197|17741004
            aminopeptidase [Agrobacterium tumefaciens str. C58 (U. Washington)]
            Length = 362

                        0          80        160        240        320     
                        |           |          |          |          |     |362
sptrembl|Q8UCH7|Q8UCH  | __________________________________________________
Local hits (HSPs)      |      ____            _________________________

 Score = 102 (41.0 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
 Identities = 32/79 (40%), Positives = 44/79 (55%)

Query:   125 RPTADFGYSAC--AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-SG--VTVGVLA 179
             RPT D   +A   AA G  VA G VG G G  A  +KGG+GTAS  +  SG   T+G+L 
Sbjct:   154 RPTVDEISAALKNAATG-PVAEGGVGAGTGTVAFGMKGGIGTASRRVTISGQAYTIGILV 212

Query:   180 VVNAAGNVVDPATGLPWMA 198
               N  G+++    G P+++
Sbjct:   213 QSNYGGHLL--VCGKPYVS 229

 Score = 62 (26.9 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
 Identities = 26/97 (26%), Positives = 41/97 (42%)

Query:   237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA-VAVPPEAGVPAA 295
             ++A DA LS    +R+A  +  GLART   A +   GD   A +T   +   P       
Sbjct:   242 IVATDAPLSSRNLKRLAARSFGGLART-GAALSNGSGDYALAFSTDERLRRTPARRKAVT 300

Query:   296 LSPE--TQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
               PE     ++ +  AA +    A+L  +  A   +G
Sbjct:   301 EYPELSNDAISPLFEAAIEATEEAILNSLCAATTTSG 337

 Score = 53 (23.7 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV 42
             +N+ITDV G+  GH   ++     G     G T +LP  G +
Sbjct:    34 LNAITDVEGVTSGHSTVIE-----GETIRTGATAILPHGGNL 70

 Score = 39 (18.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query:   264 IRPAHTPLDGDTVFALATGA 283
             + P H   DG  V  +AT A
Sbjct:   228 VSPEHKDKDGSIVIIVATDA 247


^ = sptrembl|Q8YBZ5|Q8YBZ5 D-aminopeptidase (EC
            3.4.11.19).//:trembl|AE009708|AE009708_8 gene: "BMEII0741";
            product: "D-AMINOPEPTIDASE";  Brucella melitensis 16M chromosome
            II, section 70 of 107 of the complete sequence.
            //:pironly|AD3602|AD3602 D-stereospecific aminopeptidase (EC
            3.4.11.19) [imported] - Brucella melitensis //:gp|AE009708|17984931
            D-AMINOPEPTIDASE [Brucella melitensis 16M]
            Length = 340

                        0         70        140       210       280        
                        |          |          |         |         |        |340
sptrembl|Q8YBZ5|Q8YBZ  | __________________________________________________
Local hits (HSPs)      |     ___________________________ _______________

 Score = 112 (44.5 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
 Identities = 56/202 (27%), Positives = 86/202 (42%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTV------GAVDCRGGAPGTR 55
             N+ITDV G++VGH+   D + + G      VT ++P  G +       A D   G  G +
Sbjct:    21 NAITDVPGVQVGHHTLRDGNINTG------VTAIIPHGGNLYRRKVLAACDIINGF-G-K 72

Query:    56 ETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAVI 114
              T L+           +LL      G   A+ ++R        +   +  V P+V     
Sbjct:    73 STGLVQIEELGSLETPILLTNTFGVG-TCANALIRDAIAANPDIGRATATVNPVV--LEC 129

Query:   115 FDLPVGGWNCRP-TADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ-SG 172
              D P+        T +    A  +A V+V  G VG G G      KGG+GT+S   +  G
Sbjct:   130 NDGPLNDIQAMAVTEEHARLALRSAQVNVPQGNVGAGTGMTCFGFKGGIGTSSRRFEFDG 189

Query:   173 VT--VGVLAVVN--AAGNVVDP 190
                 +G+LA+ N   AG++V P
Sbjct:   190 KLHHLGILALTNFGRAGDLVLP 211

 Score = 65 (27.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
 Identities = 30/111 (27%), Positives = 42/111 (37%)

Query:   222 SPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALAT 281
             SP         + I V+A D AL     +R+      GLAR +        GD      T
Sbjct:   217 SPKAETQPEKGSVILVLATDVALEHRQLKRVTRRCGAGLAR-LGAFWGHGSGDIAIGFTT 275

Query:   282 GAVAVPPEAG--VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
             G      E    +P  +  E ++ T    AAA+    AVL  +  AQ + G
Sbjct:   276 GITFDHDEPNDFIPMMILNENRIDTLF-RAAAEATEEAVLNSMCRAQAMRG 325


^ = sptrembl|Q8CVA7|Q8CVA7 D-aminopeptidase.//:trembl|AP004596|AP004596_4 gene:
            "OB0850"; product: "D-aminopeptidase";  Oceanobacillus iheyensis
            HTE831 genomic DNA, section 4/13. //:gp|AP004596|22776531
            D-aminopeptidase [Oceanobacillus iheyensis HTE831]
            Length = 328

                        0         70        140        210       280       
                        |          |          |          |         |       |328
sptrembl|Q8CVA7|Q8CVA  | __________________________________________________
Local hits (HSPs)      |   _____________________________  _______

 Score = 119 (46.9 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
 Identities = 52/204 (25%), Positives = 87/204 (42%)

Query:     4 ITDVGGIRVGH---YQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTRET 57
             ITDV G++VGH   Y++++   ++      GVT +LP PG +       G     G  +T
Sbjct:    11 ITDVHGVQVGHTTLYEKINEKDTI----CTGVTAILPHPGNLFRQKVIAGCSVINGFGKT 66

Query:    58 DLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDL 117
               L   N +  +++ ++   +        G + ++      +   +G + ++ G    D 
Sbjct:    67 TGLVQLNELGLIESPIMLTNTLSIAPVMQGTLTYMLNRTEEIGDTTGTINLIVGECN-DS 125

Query:   118 PVGGWNCRP-TADFGYSACAAAGVDVAV-GTVGVGVGARAGALKGGVGTASATLQ-SGV- 173
              +     +  T      A  +A  + +  G VG G G +    KGG+GTAS  +Q   V 
Sbjct:   126 YLNSIRLQAITPSHAIKAIESASNESSEEGAVGAGTGMQCFGYKGGIGTASRLIQVEDVI 185

Query:   174 -TVGVLAVVNAAGNVVDPATGLPW 196
              T+G L V N  GN    AT   W
Sbjct:   186 YTLGGLVVSNY-GNRKQ-ATFADW 207

 Score = 56 (24.8 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
 Identities = 19/53 (35%), Positives = 24/53 (45%)

Query:   229 TPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALAT 281
             TP  + + ++A DA LS     RIA     GL RT   A     GD   A +T
Sbjct:   214 TPDGSIMMILATDAPLSDRQLNRIAKRCAAGLGRT-GSALDHGSGDIAIAFST 265


^ = sptrembl|Q930Z6|Q930Z6 Putative
            D-aminopeptidase.//:trembl|AE007199|AE007199_4 gene: "SMa0095";
            product: "putative D-aminopeptidase";  Sinorhizobium meliloti
            plasmid pSymA section 5 of 121 of the complete plasmid sequence.
            //:pironly|H95267|H95267 probable D-aminopeptidase [imported] -
            Sinorhizobium meliloti (strain 1021) maga//:gp|AE007199|14523107
            putative D-aminopeptidase [Sinorhizobium meliloti]
            Length = 345

                        0         70       140       210       280         
                        |          |         |         |         |         |345
sptrembl|Q930Z6|Q930Z  | __________________________________________________
Local hits (HSPs)      |     ___________________________   ____________

 Score = 122 (48.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 61/205 (29%), Positives = 87/205 (42%)

Query:     2 NSITDVGGIRVGHYQRLDPDASL-GAGWACGVTVVLPPPGTVGAVDCRGGAP---GT-RE 56
             N+ITDV G+ VGH        SL G G   GVT +LP  G V  V  R       G  + 
Sbjct:    21 NAITDVAGVSVGH-------RSLRGEGLFTGVTAILPHAGDVFRVKPRAAVEVINGFGKS 73

Query:    57 TDLLDPANSVRFVDALLLAGGSAYGLAAA-DGVMRWLEEHRRGVAMDSGVVPIVPGAVIF 115
               L+  A        ++L   + +G+AA  + ++R        +   +  V     A++ 
Sbjct:    74 AGLMQVAEIGTIETPIVLT--NTFGVAACTEALVRRAISANPAIGRKTSTV----NALVC 127

Query:   116 DLPVGGWN-----CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ 170
             +   G  N         AD   +  AA    V  G VG G G  A   K G+GTAS  ++
Sbjct:   128 ECNDGSINDIQALAVTPADAEAALDAARTGPVEQGAVGAGSGMTAFGFKAGIGTASRRMR 187

Query:   171 SG---VTVGVLAVVN--AAGNVVDP 190
              G    T+G L + N  AAG++V P
Sbjct:   188 VGKRDFTLGTLVLANFGAAGDLVLP 212

 Score = 48 (22.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 27/91 (29%), Positives = 37/91 (40%)

Query:   233 TTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGV 292
             + I V+A D  L+    +R+A  A  GLAR +        GD      T   A P E   
Sbjct:   229 SVIVVMATDLPLADRQLQRVARRAGAGLAR-LGAFWGHGSGDVALCFTT---ADPVEHEP 284

Query:   293 PAALSPETQL----VTAVGAAAADCLARAVL 319
               A + + +L    +     AAAD    AVL
Sbjct:   285 ATAFTTQERLADGHIDIAFRAAADTTQEAVL 315


^ = sptrembl|Q98IB6|Q98IB6 Probable
            D-aminopeptidase.//:trembl|AP002999|AP002999_285 gene: "mlr2477";
            product: "probable D-aminopeptidase";  Mesorhizobium loti DNA,
            complete genome, section 6/21. //:gp|AP002999|14022992 probable
            D-aminopeptidase [Mesorhizobium loti]
            Length = 343

                        0         70       140       210       280         
                        |          |         |         |         |         |343
sptrembl|Q98IB6|Q98IB  | __________________________________________________
Local hits (HSPs)      |     _____________________________  _____________

 Score = 104 (41.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
 Identities = 58/213 (27%), Positives = 88/213 (41%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTRETD 58
             N+ITDV G+RVGH    + D + G      VT +LP  G +        +    G  +T 
Sbjct:    21 NAITDVPGVRVGHCTLRNGDINTG------VTAILPHGGNLFRKKVTAASHVINGFGKTI 74

Query:    59 LLDPANSVRFVDA-LLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVV-PIVPGAVIFD 116
              L     +  ++  +LL    + G  A   ++R        +   +G V P+V G    D
Sbjct:    75 GLTQVQELGSIETPVLLTNTLSVGTCATT-LIRDAIRQNPDIGRTTGTVNPLV-GECN-D 131

Query:   117 LPVGGWNCRPTAD-FGYSACAAAGV-DVAVGTVGVGVGARAGALKGGVGTASA--TLQSG 172
              P+        ++    +A A A   +V  G VG G G      KGG+G+AS    L  G
Sbjct:   132 GPLNDIQALAISEEHALAALADAHEGEVEQGNVGAGTGMTCFGFKGGIGSASRRIALGGG 191

Query:   173 VTVGVLAVVNAA--GNVVDPATGLPWMADLVGE 203
               +GVL + N    G++V P    P      G+
Sbjct:   192 HHLGVLVLSNFGRPGDLVLPDGRRPTSGQPAGD 224

 Score = 65 (27.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
 Identities = 28/96 (29%), Positives = 42/96 (43%)

Query:   237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAG--VPA 294
             V+A D  L      R+A  A  G+AR +        GD   A +TG +    E+   VP 
Sbjct:   232 VLATDLPLEHRQLERVARRAGAGIAR-LGSFWGHGSGDIAIAFSTGNLVDHDESRDLVPL 290

Query:   295 ALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAG 330
                 E + +  +  AAA+    AVL  +L+A+   G
Sbjct:   291 LALNEAR-IDILFRAAAEATQEAVLNSMLSAEAFTG 325


^ = sptrembl|Q848K7|Q848K7 Putative aminopeptidase.//:trembl|AF543480|AF543480_6
            product: "putative aminopeptidase";  Uncultured bacterium plasmid
            pAK106 SodA (sodA) gene, partial cds; GreA (greA), MutY (mutY),
            putative aminopeptidase, and putative response regulator genes,
            complete cds; and unknown genes. //:gp|AF543480|28875488 putative
            aminopeptidase [uncultured bacterium]
            Length = 115

                        0            30           60           90          
                        |             |            |            |          |115
sptrembl|Q848K7|Q848K  | __________________________________________________
Local hits (HSPs)      |               __________________________

 Score = 99 (39.9 bits), Expect = 0.00036, P = 0.00036
 Identities = 27/63 (42%), Positives = 35/63 (55%)

Query:   136 AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG---VTVGVLAVVNAAGNVVDPAT 192
             AA    VA G+VG G G  A   KGG+GT+S  + +G    TVGVL   N  G++V    
Sbjct:    32 AARSGPVAEGSVGAGTGTIAFGWKGGIGTSSRAVTAGGSSYTVGVLVQSNYGGDLV--MA 89

Query:   193 GLP 195
             G+P
Sbjct:    90 GVP 92


^ = sptrembl|Q98JC5|Q98JC5 Hypothetical protein
            mll2007.//:trembl|AP002998|AP002998_263 gene: "mll2007";
            Mesorhizobium loti DNA, complete genome, section 5/21.
            //:gp|AP002998|14022632 hypothetical protein [Mesorhizobium loti]
            Length = 289

                        0         60        120       180       240        
                        |          |          |         |         |        |289
sptrembl|Q98JC5|Q98JC  | __________________________________________________
Local hits (HSPs)      |         ___________________________________

 Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
 Identities = 69/218 (31%), Positives = 91/218 (41%)

Query:   119 VGGWNCRPTADFGYSACAAAGVDVAVGTVG-VGVGARAGALKGGVGTASATLQSGVTV-G 176
             VGG         G S  A+ GV  +VG VG   VGA  GA   GV  +     +GV+  G
Sbjct:    41 VGGLGLGAGVSAG-SKGASVGVGASVGGVGGANVGASVGAGNAGVDASGNVGNAGVSASG 99

Query:   177 VL--AVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTT 234
              +  A V+A GNV   ATG   ++  VG   L A P+ +  ++A       A     + T
Sbjct:   100 NVGSAGVSAGGNV--GATG-GGLSTGVG---LGADPSAETGSVAASGGSAAAATASGSAT 153

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLA--RTIRPAHTPLDGDTVFALATGAVAVPPEA-- 290
              G  A  +A +  A    A  A   +A    +RP      GD    LA G    P EA  
Sbjct:   154 TGSAATGSAATATATTATAKTARQSIALPTVLRPTKAG-QGD----LARGYPFAPLEALK 208

Query:   291 ---GVPAA--LSPETQLVTAVGAAAADCLARAVLAGVL 323
                G PAA  L+    +++A     A    RAV AG L
Sbjct:   209 AKPGTPAAVVLACRAAIMSAAKPLGA-VRVRAVSAGAL 245


^ = sptrembl|Q9L0P1|Q9L0P1 Hypothetical protein
            SCO4250.//:trembl|AL939119|SCO939119_128 gene: "SCO4250";
            "SCD8A.23"; product: "conserved hypothetical protein SCD8A.23";
            Streptomyces coelicolor A3(2) complete genome; segment 16/29
            //:gp|AL939119|7242771 conserved hypothetical protein SCD8A.23
            [Streptomyces coelicolor A3(2)]
            Length = 1111

                        0        230        460       690       920        
                        |          |          |         |         |        |1111
sptrembl|Q9L0P1|Q9L0P  | __________________________________________________
Local hits (HSPs)      |      ___________________

 Score = 120 (47.3 bits), Expect = 0.0017, P = 0.0017
 Identities = 98/320 (30%), Positives = 111/320 (34%)

Query:    25 GAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY---- 80
             GA    G   V+  PG+VGA D   GA G  E   +   +SVR  DA    G  A     
Sbjct:   111 GAVGEAGAVTVVAGPGSVGA-DGLAGAAGAAEGGAI--GSSVRRSDARWTGGSGAPPGCA 167

Query:    81 --GLAAADG----VMRWLEEHRRGVAMDSGVVPIV-PGAVIFDLPVG----GWNCRPTAD 129
               G A  DG      RW      G A   G V  V P  V   +PVG    G    P  D
Sbjct:   168 EDGRAGGDGWAADARRWTGGRPAGAAGTPGAVAEVRPPPVASPVPVGRAPDGAAVSPP-D 226

Query:   130 FGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQ--SGVTVGVLAVVNAAGNV 187
                    AA   V    VG   GA A    G  G A A  +  +G  VG  A + AAG  
Sbjct:   227 SAAGVVRAAACRVGAPAVGPSAGAAARWTGGPTGVAPADGEGAAGPPVGG-APLPAAGVA 285

Query:   188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP-LGAFNTPFNTTIGVIACDAAL-S 245
              D  +     A      A    P    A     S P  G          GV+  +    S
Sbjct:   286 ADRESARRTGACPCA--ASEVVPDAGGAVRPWASDPGSGCAAARCTGAPGVVCGEPVRRS 343

Query:   246 PAACRRIAIAAHDGLARTIRPAH--TPLDGDTVFALATGAVAVPP-EAGVPAALSPETQL 302
             PA   R    A   +A    PA    P           GA AV P  AG  A LSP    
Sbjct:   344 PADAGRSGCPAARRVAGAASPAGGVVPPSVRRTARCTGGAPAVAPLPAGADAGLSPGRTA 403

Query:   303 VTAVGAAAADCL-ARAVLAG 321
                 GAA A  L A +V AG
Sbjct:   404 GRRAGAADAGPLPAASVGAG 423

 Score = 95 (38.5 bits), Expect = 0.96, P = 0.62
 Identities = 101/339 (29%), Positives = 120/339 (35%)

Query:    11 RVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVD 70
             RVG    + P A   A W  G T V P  G   A    GGAP        D   S R   
Sbjct:   238 RVGA-PAVGPSAGAAARWTGGPTGVAPADGEGAAGPPVGGAPLPAAGVAAD-RESARRTG 295

Query:    71 ALLLAGGSAYGLAAADGVMR-WLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTAD 129
             A   A      +  A G +R W  +   G A  +      PG V  + PV     R  AD
Sbjct:   296 ACPCAASEV--VPDAGGAVRPWASDPGSGCA--AARCTGAPGVVCGE-PVR----RSPAD 346

Query:   130 FGYSACAAAG-VDVAVGTVG--VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGN 186
              G S C AA  V  A    G  V    R  A   G   A A L +G   G L+    AG 
Sbjct:   347 AGRSGCPAARRVAGAASPAGGVVPPSVRRTARCTGGAPAVAPLPAGADAG-LSPGRTAGR 405

Query:   187 VVDPATGLPWMADLVG-----EFALR----APPAEQIAALAQL--SSPLGAFNTPFNTTI 235
                 A   P  A  VG       A R     P AE + A A +  S PL           
Sbjct:   406 RAGAADAGPLPAASVGAGPDGRAAARWTGGVPGAEPLFAGAGVDGSPPLDG-RAVARWAG 464

Query:   236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAA 295
             G +  D  LSP A    A +   G A    P    +   T      GAVA+   AGV   
Sbjct:   465 GAV--DVELSPGAVA--AGSPPPGCAG--EPVGRAVARWT--GGVPGAVALSAGAGVEGV 516

Query:   296 LSPETQLVTA-VGAAAADCL-ARAVLAGVLNAQPVAGIP 332
             L P+ + V    G      L   AV+AG+L   P   +P
Sbjct:   517 LLPDGRAVARWTGGVPGVVLPVGAVVAGLL---PGCAVP 552


^ = trembl|BX571866|BX571866_200 Photorhabdus luminescens subsp. laumondii TTO1
            complete genome; segment 8/17 //:gp|BX571866|36785601 unnamed
            protein product [Photorhabdus luminescens subsp. laumondii TTO1]
            Length = 397

                        0         80       160       240       320         
                        |          |         |         |         |         |397
trembl|BX571866|BX571  | __________________________________________________
Local hits (HSPs)      |       __________________________________

 Score = 114 (45.2 bits), Expect = 0.0020, P = 0.0020
 Identities = 72/292 (24%), Positives = 112/292 (38%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWA---CGVTVVLPPPGTVGAV-DCRGGAPGTRET 57
             N+ITDV G+ VG+   ++ D  L  G      GVT +LP       V        G  + 
Sbjct:    41 NAITDVSGVEVGYSTIIEGDGKLEVGKGPIRTGVTAILPKGKKFSPVFSSTFSLNGNGDM 100

Query:    58 DLLDPANSVRFVDA-LLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPG-AVIF 115
                       F++  +L+    + G+   D  + W+ ++     +   +  ++P  A  +
Sbjct:   101 TGNQWVKESGFLETPILITNTHSVGIVR-DSTISWMIDNNLTSPLKDDLFWLLPVVAETW 159

Query:   116 D--L-PVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS- 171
             D  L  + G + +    +     A +G  +  G VG G G      KGG GT+S  L   
Sbjct:   160 DGILNDINGMHVKKEHVYHALNSAKSGA-IEEGNVGGGTGMNLFKFKGGTGTSSRILDKK 218

Query:   172 --GVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
               G TVGVL      GN  D         DL+       P  ++I  L  +         
Sbjct:   219 DGGYTVGVLV----QGNFGD-------RDDLI---IAGIPVGKEIQDLKPIYHGGKKKIK 264

Query:   230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALAT 281
                + I V+A DA L+P    +IA     GLA+    A     G+   A +T
Sbjct:   265 DAGSIIAVVATDAPLAPHQLEKIAKRVSLGLAKVGGVARNT-SGEIFIAFST 315


^ = sptrembl|Q987V4|Q987V4 D-aminopeptidase.//:trembl|AP003010|AP003010_141
            gene: "mll6895"; product: "D-aminopeptidase";  Mesorhizobium loti
            DNA, complete genome, section 17/21. //:gp|AP003010|14026499
            D-aminopeptidase [Mesorhizobium loti]
            Length = 378

                        0         80        160        240       320       
                        |          |          |          |         |       |378
sptrembl|Q987V4|Q987V  | __________________________________________________
Local hits (HSPs)      |      ______________________________________

 Score = 113 (44.8 bits), Expect = 0.0024, P = 0.0024
 Identities = 84/321 (26%), Positives = 129/321 (40%)

Query:     2 NSITDVGGIRVGHYQRLDPDASL--GAGWA-CGVTVVLPPPGTVGAVDCRGGA---PGTR 55
             N+ITD+ G+ VG+   +  D  L  G G    GVT +LP P    A+    G     G  
Sbjct:    32 NAITDLPGVAVGYATLISGDGPLIVGKGPVRTGVTAILPRPLADLAIPVFAGIFSQNGNG 91

Query:    56 E---TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV-VPIVPG 111
             E   + +++   +  F   + +    + G++  DG +RW++      A+DS   +P+   
Sbjct:    92 ELTGSHIIEETGAFNF--PITITNTHSCGVSR-DGTLRWMQRVLP-TAVDSAWGLPVA-- 145

Query:   112 AVIFDLPVGGWNCRPTADFGYSACA---AAGVDVAVGTVGVGVGARAGALKGGVGTASAT 168
             A  +D  +   N      F + A A   A G  +  G+VG G G      K G GTAS  
Sbjct:   146 AETYDGFLNDINGHHLT-FDHVAQALDDATGGPIEEGSVGGGTGMITFGFKAGSGTASRI 204

Query:   169 LQ---SGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALR--APPAEQIAALAQLSSP 223
             +    +  TVG     N          GL   ++L  E A+R   P AE+          
Sbjct:   205 VGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELT-EPAIREGTPRAEK---------- 253

Query:   224 LGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA-HTPLDGDTVFALATG 282
                      + I V+A DA   P   +R+A     G+A T     H+  D    F+ A  
Sbjct:   254 --------GSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAFSTANP 305

Query:   283 AVAVPPEAGVPAA-LSPETQL 302
             A A+ P   +  A   P+T +
Sbjct:   306 AAALAPSGRIAKADFIPDTDI 326


^ = sptremblnew|BAD08025|BAD08025 Hypothetical protein
            P0482F12.25.//:tremblnew|AP005311|AP005311_20 gene: "P0482F12.25";
            product: "unknown protein";  Oryza sativa (japonica cultivar-group)
            genomic DNA, chromosome 2, PAC clone:P0482F12.
            Length = 99

                        0         20        40        60        80         
                        |          |         |         |         |         |99
sptremblnew|BAD08025|  | __________________________________________________
Local hits (HSPs)      |                   _______________________________

 Score = 91 (37.1 bits), Expect = 0.0026, P = 0.0026
 Identities = 28/66 (42%), Positives = 33/66 (50%)

Query:   136 AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLP 195
             A AG D  VG   VG GA A AL  G G A A   +GV  G+ A  N AG++   A G  
Sbjct:    35 AGAGADAGVGAA-VGAGADA-ALGVGAGAAGAA-GAGVGAGIGAAANVAGSLTGAAEGAA 91

Query:   196 WMADLV 201
              +A  V
Sbjct:    92 GVAPKV 97

 Score = 78 (32.5 bits), Expect = 0.068, P = 0.066
 Identities = 26/59 (44%), Positives = 31/59 (52%)

Query:   128 ADFGYSACAAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSGVTVGVLAVVNAAG 185
             AD G  A   AG D A+G VG G    AGA  G G+G A+A +   +T G  A   AAG
Sbjct:    39 ADAGVGAAVGAGADAALG-VGAGAAGAAGAGVGAGIG-AAANVAGSLT-G--AAEGAAG 92


^ = pdb|1B65|1B65-A  STRUCTURE OF L-AMINOPEPTIDASE D-ALA-ESTERASE/AMIDASE FROM
            OCHROBACTRUM ANTHROPI, A PROTOTYPE FOR THE SERINE AMINOPEPTIDASES,
            REVEALS A NEW VARIANT AMONG THE NTN HYDROLASE FOLD
            //:sptrembl|Q59632|Q59632 D-aminopeptidase (EC
            3.4.11.19).//:trembl|X97669|OADAMP_1 gene: "dmpA"; product:
            "D-aminopeptidase";  O.anthropi dmpA gene //:gp|X97669|1310704
            D-aminopeptidase [Ochrobactrum anthropi]
            Length = 375

                        0         80        160        240       320       
                        |          |          |          |         |       |375
pdb|1B65|1B65-A        | __________________________________________________
Local hits (HSPs)      |     ___________________________________________

 Score = 112 (44.5 bits), Expect = 0.0031, P = 0.0031
 Identities = 78/344 (22%), Positives = 122/344 (35%)

Query:     2 NSITDVGGIRVGHYQRLDPDASLGAGWAC--GVTVVLPPPGTVGAVDCRGGAPGTRETDL 59
             N+ITDV G+ VG    ++ +   G       GVT +LP   +   V    G         
Sbjct:    27 NAITDVDGVGVGFQTIIENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGE 86

Query:    60 LDPANSVR----FVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPG-AVI 114
             +   + +     F+  +++      G+A     +RW+ +           + I+P  A  
Sbjct:    87 MTGTHWIEDGGYFLGPVVITNTHGIGMAH-HATVRWMVDRYASTYQTDDFLWIMPVVAET 145

Query:   115 FDLPVGGWNCRPT--ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG 172
             +D  +   N  P   AD   +    A   V  G  G G G      KGG GTAS  ++ G
Sbjct:   146 YDGALNDINGFPVTEADVRKALDNVASGPVQEGNCGGGTGMITYGFKGGTGTASRVVEFG 205

Query:   173 ---VTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNT 229
                 T+G L   N          G+P     VG+      P  Q+     +         
Sbjct:   206 GRSFTIGALVQANHGQRDWLTIAGVP-----VGQHMRDGTPQSQLQERGSI--------- 251

Query:   230 PFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA-HTPLDGDTVFALATGAVAVPP 288
                  I V+A D  L P   +R+A  A  G+ R   P  +   D    F+ A        
Sbjct:   252 -----IVVLATDLPLMPHQLKRLARRASIGIGRNGTPGGNNSGDIFIAFSTANQRPMQHR 306

Query:   289 EAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
              A          + +  V  AA D +  AV+  ++ A+ + G P
Sbjct:   307 SAPFLDVEMVNDEPLDTVYLAAVDSVEEAVVNAMIAAEDMGGTP 350


^ = sptrembl|Q9X6K5|Q9X6K5 Hypothetical protein.//:trembl|AF139719|AF139719_8
            product: "unknown";  Klebsiella oxytoca plasmid pACM1 DNA primase
            (pri) gene, complete cds; and unknown genes. //:gp|AF139719|4929025
            unknown [Klebsiella oxytoca]
            Length = 153

                        0        30        60        90       120       150
                        |         |         |         |         |         |153
sptrembl|Q9X6K5|Q9X6K  | __________________________________________________
Local hits (HSPs)      |          ________________________________________

 Score = 101 (40.6 bits), Expect = 0.0035, P = 0.0035
 Identities = 43/132 (32%), Positives = 62/132 (46%)

Query:   126 PTADFG--YSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNA 183
             P+   G  YS  AAAG  +A G V  G  A AGAL  G  ++ +     +  G  +  +A
Sbjct:    28 PSRSVGAAYSGSAAAGA-LATGAVSSG-SAAAGALATGAASSGSAAAGALATGAASTGSA 85

Query:   184 AGNVVDPATG-LPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDA 242
             A  V+  ATG +   +   G  A  A      AA A L++  GA +T  +   GV+A  A
Sbjct:    86 ASGVL--ATGAVSTSSAAAGALATGAASTASAAAGA-LAT--GAASTG-SAAAGVLATGA 139

Query:   243 ALSPAACRRIAI 254
             A S AA   +++
Sbjct:   140 AFSGAATAALSV 151


^ = sptrembl|Q8VHG2|Q8VHG2 Angiomotin.//:trembl|AF461135|AF461135_1 product:
            "angiomotin";  Mus musculus angiomotin mRNA, complete cds.
            //:gp|AF461135|18479137 angiomotin [Mus musculus]
            Length = 891

                        0        180       360       540       720         
                        |          |         |         |         |         |891
sptrembl|Q8VHG2|Q8VHG  | __________________________________________________
Local hits (HSPs)      |                                  _____________

 Score = 116 (45.9 bits), Expect = 0.0037, P = 0.0037
 Identities = 59/233 (25%), Positives = 85/233 (36%)

Query:   107 PIVPGAVIFDL--PVGGWNCRPTADFGYSACAAAGVD-VAVGTVG-VGVGARAGALKGGV 162
             P+ P   +       G  +C    + G  +   A V  ++    G V   A A A+    
Sbjct:   587 PVPPSTPLLSAHSKTGSRDCSTQTERGPESTKTAAVTPISAPMAGPVAAAAPAAAINATA 646

Query:   163 GTASATLQSGVTVGVLAVVNAAGNVVDPATGL--PWMADLVGEFALRAPPAEQIAALAQL 220
              T +AT  +  T+ V A   A   V  PA     P  A+     A  A PA  ++A   +
Sbjct:   647 ATNTATAATNTTIMVAAAPVAVAAVAAPAAAAATPSPANAAA-LAAAAAPATSVSAATSV 705

Query:   221 SSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALA 280
             S+              V+   A +SPAA  +I  AA          + TP       A A
Sbjct:   706 SAANSISPAAPVAPAAVVPPAAPVSPAAAVQIPAAA----------SLTPATVSPTAATA 755

Query:   281 TGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
             T AVA    A + AA +  T  +    A +A   + A +     AQ  A  PT
Sbjct:   756 TAAVAAATTAAITAAAAAATTAIQVAPATSAPVPSPASIPAPATAQASAPTPT 808

 Score = 94 (38.1 bits), Expect = 0.95, P = 0.61
 Identities = 48/178 (26%), Positives = 65/178 (36%)

Query:   138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWM 197
             A   VAV  V     A A          +A      +V     V+AA N + PA   P  
Sbjct:   662 AAAPVAVAAVAAPAAAAATPSPANAAALAAAAAPATSVSAATSVSAA-NSISPAA--P-- 716

Query:   198 ADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAH 257
                V   A+  PPA  ++  A +  P  A  TP   T+   A  A  + AA    AI A 
Sbjct:   717 ---VAPAAV-VPPAAPVSPAAAVQIPAAASLTP--ATVSPTAATATAAVAAATTAAITAA 770

Query:   258 DGLART---IRPAHT-PLDGDTVF---ALATGAVAVPPEAGVPAALSPETQLVTAVGA 308
                A T   + PA + P+         A A  +   P +A  PA   P + + T   A
Sbjct:   771 AAAATTAIQVAPATSAPVPSPASIPAPATAQASAPTPTQASTPAPTEPPSPVPTPTPA 828


^ = sptrembl|Q8UK81|Q8UK81 Aminopeptidase.//:trembl|AE007894|AE007894_6 gene:
            "AGR_pAT_343"; product: "AGR_pAT_343p";  Agrobacterium tumefaciens
            str. C58 plasmid AT, section 22 of 50 of the complete sequence.
            //:trembl|AE008947|AE008947_1 gene: "Atu5242"; product:
            "aminopeptidase";  Agrobacterium tumefaciens str. C58 AT plasmid
            section 22 of 49 of the complete sequence. //:pironly|AE3189|AE3189
            aminopeptidase Atu5242 [imported] - Agrobacterium tumefaciens
            (strain C58, Dupon//:gp|AE007894|15162009 AGR_pAT_343p
            [Agrobacterium tumefaciens str. C58
            (Cereon)]//:gp|AE008947|17743680 aminopeptidase [Agrobacterium
            tumefaciens str. C58 (U. Washington)]
            Length = 384

                        0         80        160       240       320        
                        |          |          |         |         |        |384
sptrembl|Q8UK81|Q8UK8  | __________________________________________________
Local hits (HSPs)      |     _________________________     ____________

 Score = 100 (40.3 bits), Expect = 0.0077, Sum P(2) = 0.0076
 Identities = 56/198 (28%), Positives = 79/198 (39%)

Query:     1 MNSITDVGGIRVG--HYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAP---GTR 55
             +N+ITD+ GI VG    +   P          GVT +LP       V    G     G  
Sbjct:    27 LNAITDIAGIHVGVSTIREEVPRPGRKLPVRTGVTAILPHATASEPVPVFAGIHRFNGNG 86

Query:    56 E---TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWL-EEHRRGVAMDSG--VVPIV 109
             E   +  +D      FV  +L+    + G+A      RW+ + +      D    ++P+V
Sbjct:    87 EMTGSHWIDDGGY--FVGPVLITNTHSVGIAHHSAA-RWMIDRYSATYEGDEQLWIMPVV 143

Query:   110 PGAVIFDLPVGGWNCRP-TADFGYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASA 167
               A  +D  +   N +  T D  + A   A    VA G+VG G G  A   KGG GTAS 
Sbjct:   144 --AETYDGLLNDINGQHVTVDHVFEALNGANTGPVAEGSVGGGTGMIAYGFKGGTGTASR 201

Query:   168 TLQSG---VTVGVLAVVN 182
              +  G    TV  L   N
Sbjct:   202 RIAVGGEEFTVAALVQAN 219

 Score = 49 (22.3 bits), Expect = 0.0077, Sum P(2) = 0.0076
 Identities = 24/102 (23%), Positives = 46/102 (45%)

Query:   235 IGVIACDAALSPAACRRIAIAAHDGLAR--TIRPAHTPLDGDTVFALATGAV-AVPPEAG 291
             I VIA D  L+P   +++A     G+ R  T+  +++   GD   A +T     +  +AG
Sbjct:   251 IVVIATDVPLAPHQLQKLARRGAIGIGRNGTVGGSNS---GDIFLAFSTANPHPMRHKAG 307

Query:   292 -VPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
              + + +     ++  V  A    +  AV+  ++ A+   G P
Sbjct:   308 PLLSIVMVNDDVLDPVYQAVVQSVEEAVVNAMIAAETTGGTP 349


^ = sptrembl|O50430|O50430 Hypothetical protein
            Rv1174c.//:sptrembl|Q7U0G8|Q7U0G8 Hypothetical
            protein.//:trembl|AE006998|AE006998_9 gene: "MT1211"; product:
            "hypothetical protein";  Mycobacterium tuberculosis CDC1551,
            section 84 of 280 of the complete genome.
            //:trembl|BX248337|BX248337_296 gene: "Mb1207c"; product:
            "HYPOTHETICAL PROTEIN";  Mycobacterium bovis subsp. bovis AF2122/97
            complete genome; segment 4/14 //:trembl|BX842575|BX842575_255 gene:
            "TB8.4"; product: "LOW MOLECULAR WEIGHT T-CELL ANTIGEN TB8.4";
            Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
            //:pironly|F70875|F70875 hypothetical protein Rv1174c -
            Mycobacterium tuberculosis (strain H37RV)//:gp|BX248337|31617956
            HYPOTHETICAL PROTEIN [Mycobacterium bovis subsp. bovis
            AF2122/97]//:gp|AE006998|13880799 hypothetical protein
            [Mycobacterium tuberculosis CDC1551]
            Length = 110

                        0            30            60           90         
                        |             |             |            |         |110
sptrembl|O50430|O5043  | __________________________________________________
Local hits (HSPs)      |  _________________________________________

 Score = 86 (35.3 bits), Expect = 0.0092, P = 0.0092
 Identities = 32/91 (35%), Positives = 42/91 (46%)

Query:   142 VAVGTVGVGVGARAGALKGGVGTASATLQSGV--TVGVLAVVNAAGNVVDPATGLPWMAD 199
             +++  +  GVGA A +L  G G ASA     V  T      V AA N  DP     + A 
Sbjct:     3 LSLTALSAGVGAVAMSLTVGAGVASADPVDAVINTTCNYGQVVAALNATDPGAAAQFNAS 62

Query:   200 LVGEFALR----APPAEQIAALAQLSSPLGA 226
              V +  LR    APP ++ A  AQL +  GA
Sbjct:    63 PVAQSYLRNFLAAPPPQRAAMAAQLQAVPGA 93


^ = tremblnew|AE017242|AE017242_183 product: "hypothetical protein";
            Mycobacterium avium subsp. paratuberculosis str. k10, section 16 of
            16 of the complete genome.
            Length = 473

                        0        100        200        300       400       
                        |          |          |          |         |       |473
tremblnew|AE017242|AE  | __________________________________________________
Local hits (HSPs)      |      _______________________            ______

 Score = 97 (39.2 bits), Expect = 0.012, Sum P(2) = 0.011
 Identities = 71/237 (29%), Positives = 99/237 (41%)

Query:    49 GGAPGTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEE-HRRGVAM--DSG- 104
             GG  G R   ++   ++    DAL  A       AAAD ++   E  HR+G+A    +G 
Sbjct:    47 GGVAGRRVCAVVGSGDNGG--DALWAATFLRRRGAAADAILLNPERAHRKGLAAFGKAGG 104

Query:   105 --VVPIVPGA-VIFDLPVG--GWNC-RPTADFGYSACAAAGVDVAVGTVGVGVGARAGAL 158
               V  + P   ++ D  VG  G    RP A   ++A   AG+ V    +  G+ A  GA 
Sbjct:   105 RIVESVSPTTDLVIDGVVGISGSGALRPAAAEVFAAVDDAGIPVVAVDIPSGIDAATGAT 164

Query:   159 KGGVGTASATLQSGVTVGVLAVVNAAGN-----VVDPATGLPWMADLVGEFALRAPPAEQ 213
              G    A  T    VT G L  V+A G+     ++D    LP   D++G F      A  
Sbjct:   165 SGPAVHAVLT----VTFGGLKPVHALGDCGRVKLIDIGLDLP-QTDVLG-FE-----AAD 213

Query:   214 IAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAA--CRRIAIAAHDGLARTIRPAH 268
             +AA   +  P     T   T  GV+A  A    AA  C   A+AA  G+ R    AH
Sbjct:   214 VAARWPVPGPHDDKYTQGVT--GVMAGSATYPGAAVLCTGAAVAATSGMVRYAGSAH 268

 Score = 53 (23.7 bits), Expect = 0.012, Sum P(2) = 0.011
 Identities = 21/67 (31%), Positives = 29/67 (43%)

Query:   276 VFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYR 335
             V  L  G V V  + G P  L+P  Q   A  A + D     VL+G++ A   +G+P   
Sbjct:   377 VTVLLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLASGLPAGE 430

Query:   336 DMFPGAF 342
                  AF
Sbjct:   431 AAAAAAF 437


^ = sptremblnew|BAD08024|BAD08024 Hypothetical protein
            P0482F12.23.//:tremblnew|AP005311|AP005311_19 gene: "P0482F12.23";
            product: "hypothetical protein";  Oryza sativa (japonica
            cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12.
            Length = 96

                        0         20         40        60        80        
                        |          |          |         |         |        |96
sptremblnew|BAD08024|  | __________________________________________________
Local hits (HSPs)      |                  ________________________________

 Score = 85 (35.0 bits), Expect = 0.012, P = 0.012
 Identities = 27/66 (40%), Positives = 32/66 (48%)

Query:   136 AAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLP 195
             A AG D  VG   VG GA A AL  G   A A   +GV  G+ A  N AG++   A G  
Sbjct:    32 AGAGADAGVGAA-VGAGADA-ALGVGANAAGAA-GAGVGAGIGAAANVAGSLTGAAEGAA 88

Query:   196 WMADLV 201
              +A  V
Sbjct:    89 GVAPKV 94

 Score = 72 (30.4 bits), Expect = 0.30, P = 0.26
 Identities = 25/59 (42%), Positives = 30/59 (50%)

Query:   128 ADFGYSACAAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSGVTVGVLAVVNAAG 185
             AD G  A   AG D A+G VG      AGA  G G+G A+A +   +T G  A   AAG
Sbjct:    36 ADAGVGAAVGAGADAALG-VGANAAGAAGAGVGAGIG-AAANVAGSLT-G--AAEGAAG 89


^ = sptrembl|Q8XRM8|Q8XRM8 Probable signal peptide
            protein.//:trembl|AL646081|AL646081_1 gene: "RSp0803"; "RS01904";
            product: "PROBABLE SIGNAL PEPTIDE PROTEIN";  Ralstonia solanacearum
            GMI1000 megaplasmid, complete sequence; segment 6/11
            //:gp|AL646081|17431275 PROBABLE SIGNAL PEPTIDE PROTEIN [Ralstonia
            solanacearum]//:gpnew|AL646081|17431275 PROBABLE SIGNAL PEPTIDE
            PROTEIN [Ralstonia solanacearum]
            Length = 667

                        0        140        280       420       560        
                        |          |          |         |         |        |667
sptrembl|Q8XRM8|Q8XRM  | __________________________________________________
Local hits (HSPs)      |      _____________________________________________

 Score = 107 (42.7 bits), Expect = 0.025, P = 0.025
 Identities = 74/287 (25%), Positives = 113/287 (39%)

Query:    38 PPGTV-GAVDCRGGAPGTRE-TDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEEH 95
             P G + G V+   G  G+   T  L+         AL  AGG++  LA   G +  +   
Sbjct:   394 PTGALSGVVNTVTGTLGSNSPTGALNGVVGT-VTGALGNAGGASNLLAPVQGTVTQVVST 452

Query:    96 RRGVAMDSGVVPIVP--GAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGA 153
               G A  S + PI    G +   LPVGG    P    G    A   V  A+G+VG G GA
Sbjct:   453 LSG-AGGSPITPITSLVGTLQNALPVGG---NPA---GALTGAVGTVTGALGSVGSGSGA 505

Query:   154 RA---GALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPP 210
              A   G +   VGT   +  +G   GV+  V  A    +PA  L      +G       P
Sbjct:   506 LAPVQGVVNQVVGTLGGSNPTGALSGVVGSVTGALGGSNPAGALTGSLGSIGA------P 559

Query:   211 AEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTP 270
               Q+  +  L+SP+G  +       G ++   A   +    ++   +  ++ T     T 
Sbjct:   560 VSQV--VGSLTSPVGGGSVGVGQVGGAVSGAVAAGGSLLGSVSNVVNSTVSNTAGAVGTV 617

Query:   271 LD--GD---TVFALATG-AVAVPPEAGVPAA--LSPETQLVTAVGAA 309
             ++  G+   TV     G +V+     G      L+P T L+T +  A
Sbjct:   618 VNAVGNAAGTVIGTVPGVSVSTTRSNGTTTIQPLAPVTSLITNLTGA 664

 Score = 104 (41.7 bits), Expect = 0.054, P = 0.052
 Identities = 66/229 (28%), Positives = 85/229 (37%)

Query:   127 TADFGYSACAAA--GV-DVAVGTVG-VGVGARAGALKGGVGTASATLQSGVTVGVL-AVV 181
             T   G ++ A A  GV     G +G VG     GAL G V T + TL S    G L  VV
Sbjct:   277 TGTLGSNSPAGALNGVVGTVTGALGNVGGSDPTGALSGVVNTVTGTLGSNSPTGALNGVV 336

Query:   182 NAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
                   +  A+G    +D  G  AL          L   +SP GA N    T  G +   
Sbjct:   337 GTVTGALGNASG----SDPTG--ALSGVVNTVTGTLGS-NSPAGALNGVVGTVTGALGNA 389

Query:   242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPE-- 299
                 P       +    G   +  P    L+G  V    TGA+      G    L+P   
Sbjct:   390 GGSDPTGALSGVVNTVTGTLGSNSPTGA-LNG--VVGTVTGALG--NAGGASNLLAPVQG 444

Query:   300 --TQLVTAV-GAAAADCLARAVLAGVL-NAQPVAGIPTYRDMFPGAFGS 344
               TQ+V+ + GA  +       L G L NA PV G P       GA G+
Sbjct:   445 TVTQVVSTLSGAGGSPITPITSLVGTLQNALPVGGNPA--GALTGAVGT 491

 Score = 99 (39.9 bits), Expect = 0.19, P = 0.17
 Identities = 86/322 (26%), Positives = 118/322 (36%)

Query:    18 LDPDASLGA-GWACG-VTVVLP-----PPGTVGAV--DCRGGAPGTRE-TDLLDPANSVR 67
             L P  S+GA   + G VT  LP     P  T+ A      G  P +   + ++   NSV 
Sbjct:    57 LTPTTSIGATASSSGEVTTTLPGALGTPTDTLVATVQSVTGNTPASSAVSQVIGTVNSVN 116

Query:    68 FVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPT 127
              V  +    G A G  +  G    L   +  V     VV  V G+       G  N   T
Sbjct:   117 PVGTVASTAGGALG--SIGGGSNALASVQGTVGQ---VVGTVSGSDPSGALSGALNT-VT 170

Query:   128 ADFGYSACAAAGVDVAVGTVGVGVGAR--AGALKGGVGTASATLQSGVTVGVLAVVNAAG 185
                G S  A   ++  VGTV   +G     GAL G +GTA+  L +   VG     +A  
Sbjct:   171 GALGGSGNATGALNGVVGTVTGALGNNNPTGALNGVIGTATGALGN---VGGSDPTSALS 227

Query:   186 NVVDPATGLPWMADLVGEFALRAPPAEQIAALAQL--SSPLGAFNTPFNTTIGVIACDAA 243
              VV+  TG        G  AL         AL  +  S P  A +   NT  G +  +  
Sbjct:   228 GVVNTVTGTLGSNSPAG--ALNGVVGTVTGALGNVGGSDPTSALSGVVNTVTGTLGSN-- 283

Query:   244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
              SPA      +    G    +  +        V    TG +      G   AL+     V
Sbjct:   284 -SPAGALNGVVGTVTGALGNVGGSDPTGALSGVVNTVTGTLGSNSPTG---ALNGVVGTV 339

Query:   304 T-AVGAAAADCLARAVLAGVLN 324
             T A+G A+      A L+GV+N
Sbjct:   340 TGALGNASGSDPTGA-LSGVVN 360


^ = sptrembl|O13028|O13028 Antifreeze glycopeptide AFGP polyprotein
            precursor.//:trembl|U43200|BSU43200_1 product: "antifreeze
            glycopeptide AFGP polyprotein precursor";  Boreogadus saida
            antifreeze glycopeptide AFGP polyprotein precursor gene, complete
            cds. //:pironly|T44768|T44768 antifreeze glycopeptide AFGP
            polyprotein precursor [imported] - Boreogadus
            saida//:gp|U43200|2078483 antifreeze glycopeptide AFGP polyprotein
            precursor [Boreogadus saida]
            Length = 507

                        0        110        220        330        440      
                        |          |          |          |          |      |507
sptrembl|O13028|O1302  | __________________________________________________
Local hits (HSPs)      |   _________________________________________

 Score = 104 (41.7 bits), Expect = 0.037, P = 0.037
 Identities = 59/213 (27%), Positives = 67/213 (31%)

Query:   136 AAAGVDVAVGTVGVGVGARAGALKGGVGTAS--ATLQSGVTVGVLAVVNAAGNVVDPATG 193
             A A       T      A   A      TA+  AT  +  T    A    A     PAT 
Sbjct:   135 ATAATPATAATPATAATAATAATSATAATAARAATPATAATPATPATAARAARAATPATA 194

Query:   194 LPWMADLVGEFALRAPPAEQIAA---LAQLSSPLGAFNTPFNTTIGVIACDAALSPAACR 250
                        A  A  A   A     A+ ++P  A  TP        A  AA +P A  
Sbjct:   195 ATAATAATAATAATAATAATAATPARAARAATPATA-PTPATAATPATAATAATAPTAAT 253

Query:   251 --RIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAV----PPEAGVPA----ALSPET 300
               R A AA    A T+  A TP    T    AT A A     P  A  PA    A +P T
Sbjct:   254 PARAARAATPATAATLATAATPATPATPATAATDATAATAATPARAATPATPATAATPAT 313

Query:   301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
                 A  A AA     A  A    A   A   T
Sbjct:   314 PATAATAATAATAATAATPARAARAATPATAAT 346

 Score = 99 (39.9 bits), Expect = 0.13, P = 0.12
 Identities = 62/213 (29%), Positives = 68/213 (31%)

Query:   125 RPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNA- 183
             RP A    +  A A       T      A   A      T  AT  +  T    A   A 
Sbjct:    27 RPAAAARAATPATAATPATAATPATAATAATEATAATAATP-ATAATPATAATAATTAAT 85

Query:   184 AGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNT-TIGVIACDA 242
             A      AT  P  A      A  A PA   AA A  ++      TP    T    A  A
Sbjct:    86 AATAATAAT--PARAARAATPATAATPAT--AATAATAATAATAETPARAATPATAATPA 141

Query:   243 -ALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA-ALSPET 300
              A +PA     A AA    A T   A TP    T    AT A A    A  PA A +  T
Sbjct:   142 TAATPATAATAATAATSATAATAARAATPATAATPATPATAARAA--RAATPATAATAAT 199

Query:   301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
                 A  A AA     A  A    A   A  PT
Sbjct:   200 AATAATAATAATAATAATPARAARAATPATAPT 232

 Score = 90 (36.7 bits), Expect = 1.3, P = 0.73
 Identities = 57/216 (26%), Positives = 64/216 (29%)

Query:   134 ACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATG 193
             A AA     A           A A +      +ATL +  T    A    A      AT 
Sbjct:   234 ATAATPATAATAATAPTAATPARAARAATPATAATLATAATPATPATPATAATDATAATA 293

Query:   194 L-PWMADLVGEFALRAPPAEQIAAL--------AQLSSPLGAFN--TPFNTTIGVIACDA 242
               P  A      A  A PA    A         A  ++P  A    TP        A  A
Sbjct:   294 ATPARAATPATPATAATPATPATAATAATAATAATAATPARAARAATPATAATPATAATA 353

Query:   243 ALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPP----EAGVPAA-LS 297
             A +  A      A     AR   PA T     T    AT A A  P     A  PA   +
Sbjct:   354 ATAATAATAATAATPARAARAATPA-TAATAATAATAATAATAATPARAARAATPATPAT 412

Query:   298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
             P T    A  A AA     A  A    A   A  PT
Sbjct:   413 PATPATPATAATAATAATAATAATAATAATAATAPT 448


^ = trembl|K03506|BTELC_1 Bovine elastin c mRNA, complete cds.
            //:gp|K03506|163028 elastin c precursor [Bos taurus]
            Length = 713

                        0        150        300        450       600       
                        |          |          |          |         |       |713
trembl|K03506|BTELC_1  | __________________________________________________
Local hits (HSPs)      |             _____________________________________

 Score = 104 (41.7 bits), Expect = 0.058, P = 0.057
 Identities = 77/296 (26%), Positives = 101/296 (34%)

Query:    22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
             A +GAG    +  V+P  PG +  +   GG PG     +   A +     A     G   
Sbjct:   413 AKIGAGGVGALGGVVPGAPGAIPGLPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 469

Query:    81 GLAAADGVMRWLEEHRRGVAMDSGVVPIV---PGAVI-FDLPVGGWNCRPTA---DFGYS 133
             G+A   GV+  +     GV    GV P +   PG VI   +P    +    A    F  +
Sbjct:   470 GVAPGVGVVPGV-----GVVPGVGVAPGIGLGPGGVIGAGVPAAAKSAAKAAAKAQFRAA 524

Query:   134 ACAAAGVD---VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV------VNAA 184
             A   AGV    V  G  G+GVGA    L  G G        G      A       V A 
Sbjct:   525 AGLPAGVPGLGVGAGVPGLGVGAGVPGLGVGAGVPGPGAVPGTLAAAKAAKFGPGGVGAL 584

Query:   185 GNVVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLS-SPLGAFNTP-FNTTIGVIACD 241
             G V D    G+P    + G     A  A+  A  AQ     +G           G +   
Sbjct:   585 GGVGDLGGAGIP--GGVAGVVPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGL- 641

Query:   242 AALSPAACRRIAIAAHDGLARTIRPAHT-PLDGDTVFALATGAVAVPPEAGVPAAL 296
               +SPAA  + A     GL   +      P+ G     L  G     P  G   AL
Sbjct:   642 GGVSPAAAAKAAKFGAAGLGGVLGAGQPFPIGGGAG-GLGVGGKPPKPFGGALGAL 696

 Score = 100 (40.3 bits), Expect = 0.16, P = 0.15
 Identities = 98/342 (28%), Positives = 117/342 (34%)

Query:     8 GGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVR 67
             GG+  G   R  P   +  G   G  V   P   VGA     G PG        P   + 
Sbjct:   161 GGVLPGAGARF-PGIGVLPGVPTGAGV--KPKAQVGA-GAFAGIPGVGPFGGQQPGLPLG 216

Query:    68 F-VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV----VPIVPGAVIFDLPVGGW 122
             + + A  L G      AAA      L     GV    GV    +P  PGA+     + G 
Sbjct:   217 YPIKAPKLPGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGPGIPGAPGAIPGIGGIAGV 276

Query:   123 NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS-GVT-VGVLAV 180
                  A    +A  AA    A G  GVGV    G    GVG     +   GV  VGV  V
Sbjct:   277 GAPDAAAAAAAAAKAAKFGAAGGLPGVGV---PGVGVPGVGVPGVGVPGVGVPGVGVPGV 333

Query:   181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
                 G  V P  G+P     VG   +  P A   AA A+ ++    F       IG I  
Sbjct:   334 -GVPGVGV-PGVGVPG----VGVPGVGVPGALSPAATAKAAAKAAKFGARGAVGIGGIPT 387

Query:   241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALS--P 298
                L P     I  AA    A   + A     G  V AL  G V VP   G P A+   P
Sbjct:   388 -FGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGG--VGAL--GGV-VP---GAPGAIPGLP 438

Query:   299 ETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPG 340
                 V  VG  AA     A  A      P  G+     + PG
Sbjct:   439 GVGGVPGVGIPAAAAAKAAAKAAQFGLGPGVGVAPGVGVVPG 480


^ = swiss|P04985|ELS_BOVIN Elastin precursor
            (Tropoelastin).//:trembl|J02717|BTELA_1 Bovine elastin a mRNA,
            complete cds. //:gp|J02717|163020 elastin a precursor [Bos taurus]
            Length = 747

                        0        150       300       450       600         
                        |          |         |         |         |         |747
swiss|P04985|ELS_BOVI  | __________________________________________________
Local hits (HSPs)      |            ______________________________________

 Score = 104 (41.7 bits), Expect = 0.062, P = 0.060
 Identities = 77/296 (26%), Positives = 101/296 (34%)

Query:    22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
             A +GAG    +  V+P  PG +  +   GG PG     +   A +     A     G   
Sbjct:   447 AKIGAGGVGALGGVVPGAPGAIPGLPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 503

Query:    81 GLAAADGVMRWLEEHRRGVAMDSGVVPIV---PGAVI-FDLPVGGWNCRPTA---DFGYS 133
             G+A   GV+  +     GV    GV P +   PG VI   +P    +    A    F  +
Sbjct:   504 GVAPGVGVVPGV-----GVVPGVGVAPGIGLGPGGVIGAGVPAAAKSAAKAAAKAQFRAA 558

Query:   134 ACAAAGVD---VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAV------VNAA 184
             A   AGV    V  G  G+GVGA    L  G G        G      A       V A 
Sbjct:   559 AGLPAGVPGLGVGAGVPGLGVGAGVPGLGVGAGVPGPGAVPGTLAAAKAAKFGPGGVGAL 618

Query:   185 GNVVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLS-SPLGAFNTP-FNTTIGVIACD 241
             G V D    G+P    + G     A  A+  A  AQ     +G           G +   
Sbjct:   619 GGVGDLGGAGIP--GGVAGVVPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGL- 675

Query:   242 AALSPAACRRIAIAAHDGLARTIRPAHT-PLDGDTVFALATGAVAVPPEAGVPAAL 296
               +SPAA  + A     GL   +      P+ G     L  G     P  G   AL
Sbjct:   676 GGVSPAAAAKAAKFGAAGLGGVLGAGQPFPIGGGAG-GLGVGGKPPKPFGGALGAL 730

 Score = 90 (36.7 bits), Expect = 2.1, P = 0.88
 Identities = 73/247 (29%), Positives = 88/247 (35%)

Query:    98 GVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGA 157
             GV +    +P  PGA+     + G      A    +A  AA    A G  GVGV    G 
Sbjct:   286 GVGVGGPGIPGAPGAIPGIGGIAGVGAPDAAAAAAAAAKAAKFGAAGGLPGVGV---PGV 342

Query:   158 LKGGVGTASATLQS-GVT-VGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIA 215
                GVG     +   GV  VGV  V    G  V P  G+P     VG   +  P A   A
Sbjct:   343 GVPGVGVPGVGVPGVGVPGVGVPGV-GVPGVGV-PGVGVPG----VGVPGVGVPGALSPA 396

Query:   216 ALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDT 275
             A A+ ++    F       IG I     L P     I  AA    A   + A     G  
Sbjct:   397 ATAKAAAKAAKFGARGAVGIGGIPT-FGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGG-- 453

Query:   276 VFALATGAVAVPPEAGVPAALS--PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
             V AL  G V VP   G P A+   P    V  VG  AA     A  A      P  G+  
Sbjct:   454 VGAL--GGV-VP---GAPGAIPGLPGVGGVPGVGIPAAAAAKAAAKAAQFGLGPGVGVAP 507

Query:   334 YRDMFPG 340
                + PG
Sbjct:   508 GVGVVPG 514

 Score = 86 (35.3 bits), Expect = 5.8, P = 1.0
 Identities = 82/337 (24%), Positives = 111/337 (32%)

Query:     8 GGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVR 67
             GG+  G   R  P   +  G   G  V   P   VGA     G PG        P   + 
Sbjct:   161 GGVLPGAGARF-PGIGVLPGVPTGAGV--KPKAQVGA-GAFAGIPGVGPFGGQQPGLPLG 216

Query:    68 F-VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRP 126
             + + A  L  G  YGL    G + +      GVA  +G      G  +          + 
Sbjct:   217 YPIKAPKLPAG--YGLPYKTGKLPY-GFGPGGVAGSAGKAGYPTGTGVGPQAAAA-AAKA 272

Query:   127 TADFGYSACAAAGVDVAVGTVGVGVGARAGALKG-----GVGTASATLQSGVTVGVLAVV 181
              A  G      AGV   VG  G G+    GA+ G     GVG   A   +       A  
Sbjct:   273 AAKLG---AGGAGVLPGVGVGGPGIPGAPGAIPGIGGIAGVGAPDAAAAAAAAAKA-AKF 328

Query:   182 NAAGNVVDPATGLPWMA-DLVGEFALRAP----PAEQIAALAQLSSPLGAFNTPFNTTIG 236
              AAG +  P  G+P +    VG   +  P    P   +  +      +     P     G
Sbjct:   329 GAAGGL--PGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPG 386

Query:   237 VIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV-AVPPEAGVPAA 295
             V     ALSPAA  + A  A    AR        + G   F L  G    +   A  PAA
Sbjct:   387 V-GVPGALSPAATAKAAAKAAKFGAR----GAVGIGGIPTFGLGPGGFPGIGDAAAAPAA 441

Query:   296 LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
              + +   + A G  A   +       +     V G+P
Sbjct:   442 AAAKAAKIGAGGVGALGGVVPGAPGAIPGLPGVGGVP 478


^ = swissnew|O06250|YY33_MYCTU Hypothetical protein
            Rv3433c/MT3539.//:swiss|O06250|YY33_MYCTU Hypothetical protein
            Rv3433c/MT3539.//:trembl|AE007158|AE007158_17 gene: "MT3539";
            product: "YjeF family protein";  Mycobacterium tuberculosis
            CDC1551,  section 244 of 280 of the complete genome.
            //:trembl|BX842583|BX842583_34 product: "CONSERVED HYPOTHETICAL
            PROTEIN";  Mycobacterium tuberculosis H37Rv complete genome;
            segment 12/13 //:gp|AE007158|13883370 YjeF family protein
            [Mycobacterium tuberculosis CDC1551]
            Length = 473

                        0        100        200        300       400       
                        |          |          |          |         |       |473
swissnew|O06250|YY33_  | __________________________________________________
Local hits (HSPs)      |          ______________________         ______

 Score = 88 (36.0 bits), Expect = 0.088, Sum P(2) = 0.084
 Identities = 67/225 (29%), Positives = 94/225 (41%)

Query:    83 AAADGVMRWLEE-HRRGVAM--DSG--VVPIVPGA--VIFDLPVG--GWN-CRPTADFGY 132
             AAAD V+   +  HR+ +A    SG  +V  V  A  ++ D  VG  G    RP A   +
Sbjct:    79 AAADAVLLNPDRTHRKALAAFTKSGGRLVESVSAATDLVIDGVVGISGSGPLRPAAAQVF 138

Query:   133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPAT 192
             +A  AA + V    +  G+    GA+ G    A+ T+  G    V A+ +  G VV    
Sbjct:   139 AAVQAAAIPVVAVDIPSGIDVATGAITGPAVHAALTVTFGGLKPVHALADC-GRVVLVDI 197

Query:   193 GLPWM-ADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAA--C 249
             GL     D++G F      A  +AA   +  P     T   T  GV+A  +    AA  C
Sbjct:   198 GLDLAHTDVLG-FE-----ATDVAARWPVPGPRDDKYTQGVT--GVLAGSSTYPGAAVLC 249

Query:   250 RRIAIAAHDGLARTIRPAHTPL--DGDTVFALATGAVAVPPEAGV 292
                A+AA  G+ R    AH  +      V A  T A A   +A V
Sbjct:   250 TGAAVAATSGMVRYAGTAHAEVLAHWPEVIASPTPAAAGRVQAWV 294

 Score = 54 (24.1 bits), Expect = 0.088, Sum P(2) = 0.084
 Identities = 23/70 (32%), Positives = 32/70 (45%)

Query:   273 GDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             G TV  L  G V V  + G P  L+P  Q   A  A + D     VL+G++ A   +G+P
Sbjct:   376 GATV--LLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLASGLP 427

Query:   333 TYRDMFPGAF 342
             +       AF
Sbjct:   428 SGEAAAAAAF 437


^ = sptrembl|Q7VUX6|Q7VUX6 Putative integral membrane
            protein.//:trembl|BX640419|BX640419_311 product: "putative integral
            membrane protein";  Bordetella pertussis strain Tohama I, complete
            genome; segment 9/12 //:gp|BX640419|33563950 putative integral
            membrane protein [Bordetella pertussis] [Bordetella pertussis
            Tohama I]
            Length = 452

                        0        90       180       270       360       450
                        |         |         |         |         |         |452
sptrembl|Q7VUX6|Q7VUX  | __________________________________________________
Local hits (HSPs)      |         ______________          ________

 Score = 77 (32.2 bits), Expect = 0.096, Sum P(2) = 0.092
 Identities = 44/138 (31%), Positives = 63/138 (45%)

Query:   100 AMDSGVVPI-VP---GAVIFDLPVGGWNCRPTADFGYSACAAAG--VD------VAV-GT 146
             AM  G VP  +P    A+   L    W     A  G +  A  G  VD      +AV G 
Sbjct:    79 AMQVGKVPAALPELRAALDASLAQASWLLSAFAAIGAALGAGVGMAVDAWGARRMAVAGM 138

Query:   147 VGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGL-PWMADLVGEFA 205
             +  GV +  GA+ G +G   A L+    +G LAVV +A +++  ATG  P  A  +  ++
Sbjct:   139 LAQGVASLLGAMAGAIGWLLA-LRVAEGIGFLAVVVSAPSLIVAATGTAPARARALAAWS 197

Query:   206 LRAPPAEQIAALAQLSSP 223
                P    +AA A LS+P
Sbjct:   198 TFMPLG--VAA-AMLSAP 212

 Score = 65 (27.9 bits), Expect = 0.096, Sum P(2) = 0.092
 Identities = 31/93 (33%), Positives = 40/93 (43%)

Query:   242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQ 301
             AAL  AAC    +     LAR +R       G  + AL T AV + P  GVP A      
Sbjct:   307 AALVVAACVGGNLGGGALLARGVRRTRLMTAGFVLLALGT-AVTMAP--GVPGA------ 357

Query:   302 LVTAVGAAAADCLARAVLAGVLNAQPVAGIPTY 334
                   AA   CLA + L G++    +AG P +
Sbjct:   358 ------AAYLACLAASALCGLVPTALLAGAPQH 384


^ = sptrembl|Q28099|Q28099 Elastin-cBEL1 (Fragment).//:trembl|M19372|BTEG8_4
            Bovine elastin gene, exon 1. //:gp|M19372|163003 elastin-cBEL1 [Bos
            taurus]
            Length = 650

                        0       130       260       390       520       650
                        |         |         |         |         |         |650
sptrembl|Q28099|Q2809  | __________________________________________________
Local hits (HSPs)      |         ___________________________________

 Score = 101 (40.6 bits), Expect = 0.11, P = 0.11
 Identities = 95/340 (27%), Positives = 115/340 (33%)

Query:     8 GGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVR 67
             GG+  G   R  P   +  G   G  V    PG  GA     G PG        P   + 
Sbjct:   106 GGVLPGAGARF-PGIGVLPGVPTGAGVKPKAPGGGGAF---AGIPGVGPFGGQQPGVPLG 161

Query:    68 F-VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGV----VPIVPGAVIFDLPVGGW 122
             + + A  L G      AAA      L     GV    GV    +P  PGA+     + G 
Sbjct:   162 YPIKAPKLPGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGAGIPGAPGAIPGIGGIAGV 221

Query:   123 NCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS-GVT-VGVLAV 180
                  A    +A  AA    A G  GVGV    G    GVG     +   GV  VGV  V
Sbjct:   222 GAPDAAAAAAAAAKAAKFGAAGGFPGVGV---PGVGVPGVGVPGVGVPGVGVPGVGVPGV 278

Query:   181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
                 G  V P  G+P     VG   +  P A   AA A+ ++    F       IG I  
Sbjct:   279 -GVPGVGV-PGVGVPG----VGVPGVGVPGAVSPAAAAKAAAKAAKFGARGGVGIGGIPT 332

Query:   241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
                + P     I  AA    A   + A     G  V AL  G V   P A +P    P  
Sbjct:   333 -FGVGPGGFPGIGDAAAAQAAAAAKAAKIGAGG--VGALG-GLVPGAPGA-IPGV--PGV 385

Query:   301 QLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPG 340
               V  VG  AA     A  A      P  G+     + PG
Sbjct:   386 GGVPGVGIPAAAAAKAAAKAAQFGLGPGVGVAPGVGVVPG 425

 Score = 91 (37.1 bits), Expect = 1.4, P = 0.75
 Identities = 64/222 (28%), Positives = 85/222 (38%)

Query:    22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
             A +GAG    +  ++P  PG +  V   GG PG     +   A +     A     G   
Sbjct:   358 AKIGAGGVGALGGLVPGAPGAIPGVPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 414

Query:    81 GLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVI-FDLPVGGWNCRPTADFGYSACAAAG 139
             G+A   GV+  +     GV +  G+  + PG VI   +P    +    A       AAAG
Sbjct:   415 GVAPGVGVVPGVGVVP-GVGVAPGI-GLGPGGVIGAGVPAAAKSAAKAAAKAQFR-AAAG 471

Query:   140 VDVAVGTVGVGVGARA-GALKG--GVGTASATLQSGVTVGVLAVVNAA----------GN 186
             +   V  +GVGVG    G   G  G+G  +     G   G LA   AA          G 
Sbjct:   472 LPAGVPGLGVGVGVPGLGVGVGVPGLGVGAGVPGFGAVPGTLAAAKAAKFGPGGVGALGG 531

Query:   187 VVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLS-SPLGA 226
             V D    G+P     VG  A  A  A+  A  AQ   SP  A
Sbjct:   532 VGDLGGAGIPGGVAGVGPAAAAA--AKAAAKAAQFGVSPAAA 571


^ = sptrembl|Q896W7|Q896W7 Conserved protein.//:trembl|AE015939|AE015939_22
            gene: "CTC00879"; product: "conserved protein";  Clostridium tetani
            E88, section 4 of 10 of the complete genome.
            //:gp|AE015939|28203030 conserved protein [Clostridium tetani E88]
            Length = 103

                        0        20        40        60        80      100 
                        |         |         |         |         |        | |103
sptrembl|Q896W7|Q896W  | __________________________________________________
Local hits (HSPs)      |   ______    _______________________

 Score = 70 (29.7 bits), Expect = 0.13, Sum P(2) = 0.13
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query:   236 GVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV 284
             G++  D  +  +  R     A++   +T+  AH+  DGDT+F L T  V
Sbjct:    23 GIVLYDLDIGMSNIRPNKSMAYNTYGKTMNLAHSMFDGDTIFTLGTNKV 71

 Score = 40 (19.1 bits), Expect = 0.13, Sum P(2) = 0.13
 Identities = 6/12 (50%), Positives = 10/12 (83%)

Query:     3 SITDVGGIRVGH 14
             SI+ + GI++GH
Sbjct:     5 SISSIDGIKIGH 16


^ = sptremblnew|CAE48819|CAE48819 Putative secreted
            protein.//:trembl|BX248354|BX248354_305 product: "Putative secreted
            protein";  Corynebacterium diphtheriae gravis NCTC13129, complete
            genome; segment 1/8 //:gp|BX248354|38199194 Putative secreted
            protein [Corynebacterium diphtheriae]
            Length = 192

                        0         40         80       120       160        
                        |          |          |         |         |        |192
sptremblnew|CAE48819|  | __________________________________________________
Local hits (HSPs)      |                       _____________________

 Score = 92 (37.4 bits), Expect = 0.14, P = 0.13
 Identities = 30/85 (35%), Positives = 45/85 (52%)

Query:   205 ALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAH-DGLART 263
             A+ A P  Q+AA+A L  P+    TP   T G++A  A +  A     +IAA  + +AR+
Sbjct:    84 AVDAEPWRQVAAMASLGVPMSRACTPLANTEGLVAVVAVMRAADASGASIAAGCERIARS 143

Query:   264 IRPAHTPLDGDTVFALATGA-VAVP 287
             +R  H  +D  T  A  TG  +A+P
Sbjct:   144 LRD-HA-VDTYTAQAERTGVLIALP 166


^ = sptrembl|Q94HY7|Q94HY7 Hypothetical protein.//:sptrembl|Q7XCS7|Q7XCS7
            Hypothetical protein.//:trembl|AC025296|AC025296_13 gene:
            "OSJNBa0076F20.23"; product: "hypothetical protein";  Oryza sativa
            chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
            sequence. //:trembl|AE017112|AE017112_35 product: "hypothetical
            protein";  Oryza sativa (japonica cultivar-group) chromosome 10,
            section 66 of 77 of the complete sequence. //:gp|AE017112|31433070
            hypothetical protein [Oryza sativa (japonica
            cultivar-group)]//:gp|AC025296|13786457 hypothetical protein [Oryza
            sativa] [Oryza sativa (japonica cultivar-group)]
            Length = 198

                        0         40        80       120       160         
                        |          |         |         |         |         |198
sptrembl|Q94HY7|Q94HY  | __________________________________________________
Local hits (HSPs)      |             ________________________________

 Score = 92 (37.4 bits), Expect = 0.15, P = 0.14
 Identities = 44/138 (31%), Positives = 57/138 (41%)

Query:   150 GVGARAGALKGGVG---TASATLQSGVTVGVLAVVNAAGNVVDPATGL----PW-MADLV 201
             G G RA     G G   TA+A  ++G   GVLA   AA         L    PW +A  +
Sbjct:    44 GEGGRAAVRARGEGVRATAAAAARAGGGEGVLAAAAAAATACGRRRRLLLLLPWPLASTL 103

Query:   202 GEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLA 261
                  R PP      +A  ++P+ A + P    + V A DAAL P  C R A+       
Sbjct:   104 RH--RRPPPPPPAPTIAAAAAPV-AGDDPILLDVDVGA-DAALLPVPCSRAAVIVTIAEC 159

Query:   262 RTIRPAHTPLDGDTVFAL 279
               IR     +  DTVF L
Sbjct:   160 IVIR-----IGPDTVFLL 172


^ = sptrembl|Q9L547|Q9L547 AknF.//:trembl|AF257324|AF257324_11 gene: "aknF";
            product: "AknF";  Streptomyces galilaeus aclacinomycin biosynthesis
            gene cluster, partial sequence. //:gp|AF257324|7800669 AknF
            [Streptomyces galilaeus]
            Length = 347

                        0         70       140       210       280         
                        |          |         |         |         |         |347
sptrembl|Q9L547|Q9L54  | __________________________________________________
Local hits (HSPs)      |    _______________________________

 Score = 96 (38.9 bits), Expect = 0.16, P = 0.15
 Identities = 73/234 (31%), Positives = 98/234 (41%)

Query:    94 EHRRGVAMDSGVVPIVPGAV--IFDL--PVGG-----WNC-RPTADFGY---SACAAAGV 140
             +HRR  A   G  P+   A+   FD   P G      W   RP  D  +   S      V
Sbjct:    20 QHRRMAAGLYGHEPVFTEAMDEFFDAAGPEGDPLRDDWLAERPVTDIDHVTRSQPLLFAV 79

Query:   141 DVAVGTVGVGVGARAGALKG-GVGT-ASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMA 198
             D A+G + +G G R  AL G  +G  A+ATL      GV A  +AAG V+D    L   A
Sbjct:    80 DHALGRLVLGRGVRPAALLGHSIGELAAATL-----AGVFAPRDAAGLVLDRIRRLS-AA 133

Query:   199 DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI----GVI-ACDAALSPAA--CRR 251
                G  A+ A  AE +A   +    +GA N P  T +    G +   D AL  A   CRR
Sbjct:   134 PPGGMLAVAASTAE-VAPYLRGDVVVGAVNAPRQTVLAGPDGPLDEVDRALREAGFVCRR 192

Query:   252 I-AIAA-HDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEAGVPAALSPETQL 302
             + +++A H  +         PL     FA A     AVP  +   AA   E+ +
Sbjct:   193 VPSLSAFHSPVLEPACRGAAPL-----FAAACKHPPAVPVHSAYTAAPLTESDI 241


^ = sptrembl|O15336|O15336 Elastin (Fragment).//:trembl|U93037|HSULAST4_1
            product: "elastin";  Homo sapiens elastin gene, exons 5-27 and
            alternatively spliced products, partial cds. //:gp|U93037|2304982
            elastin [Homo sapiens]
            Length = 635

                        0        130       260       390       520         
                        |          |         |         |         |         |635
sptrembl|O15336|O1533  | __________________________________________________
Local hits (HSPs)      |             ________________________________

 Score = 99 (39.9 bits), Expect = 0.18, P = 0.16
 Identities = 93/345 (26%), Positives = 116/345 (33%)

Query:     9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
             G  VG        A   A +  G   VLP  G  G     G  PG      +  PA +  
Sbjct:   219 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 278

Query:    68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
                A   A  G+A GL         GV+        GV +    +P+VPGA I    V G
Sbjct:   279 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 338

Query:   122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVG-V 177
                   A    +  A  G    VG  G+   G  AG   G GVG       +GV +VG V
Sbjct:   339 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGGV 398

Query:   178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
               V    G  + P       A      A  A     +   A  + P G   T     +G 
Sbjct:   399 PGVGGVPGVGISPEAQAAAAAKAAKYGAAGAGVLGGLVPGAPGAVP-GVPGTGGVPGVGT 457

Query:   238 IACDAALSPAACRRIAIAAHDGLARTI--RPAHTPLDGDTV---FALATGA-----VAVP 287
              A  AA + A   + A+    GL   +   P      G  V     LA G      V V 
Sbjct:   458 PAAAAAKAAAKAAQFALLNLAGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVA 517

Query:   288 PEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             P  GV   + P    V A   +AA   A+A L         AGIP
Sbjct:   518 PGVGVAPGIGPGG--VAAAAKSAAKVAAKAQLRAAAGLG--AGIP 558

 Score = 89 (36.4 bits), Expect = 2.2, P = 0.89
 Identities = 69/259 (26%), Positives = 89/259 (34%)

Query:    98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
             GV   +GV P  PG       +P VG +   +P    GY   A       G+    G + 
Sbjct:   140 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 199

Query:   149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
              G G   G + G  G A     +G  VG  A   AA         G   +   VG   + 
Sbjct:   200 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 255

Query:   208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
               P     A+  +    G   TP        A  AA   AA     +    G    +   
Sbjct:   256 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 306

Query:   268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
               P  G     +    + V P AG+P A  P   +V+    AAA   A+A   G      
Sbjct:   307 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 362

Query:   328 VAGIPTY---RDMFPGAFG 343
             V GIPTY      FPG FG
Sbjct:   363 VGGIPTYGVGAGGFPG-FG 380


^ = sptrembl|Q9LAX0|Q9LAX0 Hypothetical protein
            (Fragment).//:trembl|AF083618|AF083618_1 product: "unknown";
            Xanthomonas campestris pv. pelargonii putative serine protease
            gene, partial cds; and unknown gene. //:gp|AF083618|7542317 unknown
            [Xanthomonas campestris pv. pelargonii]
            Length = 1328

                        0        270       540       810      1080         
                        |          |         |         |         |         |1328
sptrembl|Q9LAX0|Q9LAX  | __________________________________________________
Local hits (HSPs)      |                      ___________

 Score = 102 (41.0 bits), Expect = 0.20, P = 0.18
 Identities = 77/326 (23%), Positives = 120/326 (36%)

Query:    10 IRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFV 69
             + VGH       +++  G    V V       VGA +    A       L   A + R  
Sbjct:   544 VAVGHNANATDASAVAVGGVASVPVFDASGSIVGAQEQATLAQARGAVALGSGAVAARTF 603

Query:    70 DALLLAGGSAYG-LAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGW-NCRPT 127
                +  G  A G  + A G     ++    VA   G      G+       G   N   T
Sbjct:   604 ATAVGTGAVASGEQSMASGFSARAQDD---VATAVGAFSTARGSASSAFGFGALANASLT 660

Query:   128 ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG-- 185
                G++A +     VAVG++ V  G R+  + GG+   S+TL+    +GV  V   AG  
Sbjct:   661 TAVGFNASSIGESSVAVGSLAVAAGERSVTV-GGMSLVSSTLRPAGALGVGGVAIGAGAR 719

Query:   186 NVVDPATGLPWMADLVGEFALRAPPA--EQIAALAQLSSPLGAFNTPFNTTIGVIACDAA 243
             +  D A  L + A++          A     A+ A  +  LG  ++        +  DA 
Sbjct:   720 SDGDYAIALGYNANVFSNDTNTDAVAIGHSAASFAPRTVSLGTLSSSEGAEAIAVGYDAR 779

Query:   244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
                 + R IAI +  G   +I        GD + AL T A A  P+A    A+  +  + 
Sbjct:   780 A--VSSRSIAIGS--GATTSI------FSGDNI-ALGTNARAEAPDA---IAIGRDASVG 825

Query:   304 TAVGAAAADCLARAVLAGVLNAQPVA 329
               +G   +  +A  V +  L    VA
Sbjct:   826 VFIGETGSAAMALGVQSTALGNNSVA 851


^ = sptrembl|Q8N2G0|Q8N2G0 Hypothetical protein HEMBA1000446
            (Fragment).//:trembl|AK075494|AK075494_1 unnamed ORF;  Homo sapiens
            cDNA PSEC0191 fis, clone HEMBA1000446, moderately similar to
            ELASTIN PRECURSOR. //:trembl|AX136289|AX136289_1 unnamed ORF;
            Sequence 211 from Patent EP1067182. //:gp|AX136289|14272696 unnamed
            protein product [Homo sapiens]//:gp|AK075494|22761674 unnamed
            protein product [Homo sapiens]
            Length = 472

                        0        100        200        300       400       
                        |          |          |          |         |       |472
sptrembl|Q8N2G0|Q8N2G  | __________________________________________________
Local hits (HSPs)      |     ______________________________________

 Score = 97 (39.2 bits), Expect = 0.20, P = 0.18
 Identities = 66/252 (26%), Positives = 88/252 (34%)

Query:   109 VPGAVIFDLPVGGWNCRPTADFGYSACAAAGVD------VAVGTVGVGVGARAGALKGGV 162
             VPGA+   +P G +   P A  G     A G        V  G  G G+GA  GAL GGV
Sbjct:    29 VPGAIPGGVPGGVFY--PGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAL-GGV 85

Query:   163 GTASATLQSGVTVGVLAVVNAA--GNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQL 220
             G     + +G      A   AA  G       G P     V        P   +      
Sbjct:    86 GIPGGVVGAGPAAAAAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIP 145

Query:   221 SSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAH-TPLDGDTVFAL 279
               P GA   P     GV++ +AA + AA +     A  G+     P +     G   F +
Sbjct:   146 VVP-GA-GIPGAAVPGVVSPEAA-AKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGV 202

Query:   280 ATGAV----AVPPEAGVPAA-------LSPETQLVTAVGAAAADCLARAVLAGVLNAQPV 328
               G +     VP   GVP         +SPE Q   A  AA    +    +A  +   P 
Sbjct:   203 GVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 262

Query:   329 AGIPTYRDMFPG 340
              G+     + PG
Sbjct:   263 VGVAPGVGLAPG 274

 Score = 84 (34.6 bits), Expect = 5.5, P = 1.0
 Identities = 48/170 (28%), Positives = 62/170 (36%)

Query:    20 PDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPA-NSVRFVDAL-LLAGG 77
             P    GAG   G+       G +G V   GG  G         A  + ++  A  L+ GG
Sbjct:    67 PGGLAGAGLGAGL-------GALGGVGIPGGVVGAGPAAAAAAAAKAAKYGAAAGLVPGG 119

Query:    78 SAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAA 137
               +G     GV+        GV +    +P+VPGA I    V G      A    +  A 
Sbjct:   120 PGFG----PGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAK 175

Query:   138 AGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGVTVGVLAVVNAAG 185
              G    VG  G+   G  AG   G GVG       +GV  GV  V    G
Sbjct:   176 YGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVP-GVGGVPGVGG 224

 Score = 84 (34.6 bits), Expect = 5.5, P = 1.0
 Identities = 60/202 (29%), Positives = 73/202 (36%)

Query:    20 PDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPG---TRETDLLDPANSVRF--VDALLL 74
             P   +G G   GV  V   PG VG V   GG PG   + E      A + ++  V  + +
Sbjct:   198 PGFGVGVGGIPGVAGV---PG-VGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGV 253

Query:    75 A-G-GSAYGLAAADGVMRWLEEHRR---GVAMDSGVVP-IVPGAVIFDLPVGGW-----N 123
             A G G A G+  A GV            GVA   GV P I PG V               
Sbjct:   254 APGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 313

Query:   124 CRPTADFGYS------ACAAAGVDVAVGTVGVGVGARA---GALKGGVGTASATLQSGVT 174
              R  A  G             G+ V  G  G+GVGA     GA+ G +  A A       
Sbjct:   314 LRAAAGLGAGIPGLGVGVGVPGLGVGTGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAV 373

Query:   175 VGVLAVVNAAGNVVDPATGLPW 196
              GVL  + A G V      L W
Sbjct:   374 PGVLGGLGALGGVGINLVDLSW 395


^ = trembl|U00020|ML020_14 product: "u229g";  Mycobacterium leprae cosmid B229.
            //:pironly|S72984|S72984 hypothetical protein B229_C2_201 -
            Mycobacterium leprae//:gp|U00020|467116 u229g; match to 39.6 kd
            E.coli protein in amiB 5' region (yjeF); B229_C2_201 [Mycobacterium
            leprae]
            Length = 392

                        0         80       160       240       320         
                        |          |         |         |         |         |392
trembl|U00020|ML020_1  | __________________________________________________
Local hits (HSPs)      |     __________________________            ______

 Score = 80 (33.2 bits), Expect = 0.20, Sum P(2) = 0.18
 Identities = 62/219 (28%), Positives = 96/219 (43%)

Query:    83 AAADGVMRWLEE-HRRG-VAM-DSG--VVPIVPGA--VIFDLPVG--GWN-CRPTADFGY 132
             AAAD V+   +  HR+  VA   +G  +V  V  A  ++ D  VG  G    RP A   +
Sbjct:    25 AAADAVLLNPDRVHRKALVAFRKAGGRIVENVSAATDLVIDGVVGISGSGPLRPAAAAVF 84

Query:   133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG-NVVDPA 191
             +  +A+GV V    +  G+    G + G    A+ T+  G    V A+ +     +VD  
Sbjct:    85 ATVSASGVPVVAVDLPSGIDVVTGVINGPAVHAALTVTFGGLKPVHALADCGDVTLVDIG 144

Query:   192 TGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTI-GVIACDAALSPAA-- 248
               LP  +D++G   L+A     +AA   +  P G  +  +   + GV+A  +    AA  
Sbjct:   145 LDLP-DSDILG---LQAA---DVAAYWPV--P-GVHDDKYTQGVTGVLAGSSTYPGAAVL 194

Query:   249 CRRIAIAAHDGLARTIRPAHTPL--DGDTVFALATGAVA 285
             C   A+AA  G+ R    A+T +      V A AT   A
Sbjct:   195 CTGAAVAATSGMVRYAGSAYTQVLAHWPEVIASATPTAA 233

 Score = 57 (25.1 bits), Expect = 0.20, Sum P(2) = 0.18
 Identities = 23/63 (36%), Positives = 30/63 (47%)

Query:   273 GDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             G TV  L  G V V  + G P  L+P  Q   A  A + D     VL+G++ A   AG+P
Sbjct:   322 GATV--LLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLAAGLP 373

Query:   333 TYR 335
               R
Sbjct:   374 APR 376


^ = sptrembl|Q01916|Q01916 IpiB3 protein precursor.//:trembl|L23936|PIIBIB3A_1
            gene: "ipiB3";  Phytophthora infestans ipiB3 gene, complete cds.
            //:gp|L23936|397689 ipiB3 [Phytophthora infestans]
            Length = 347

                        0         70       140       210       280         
                        |          |         |         |         |         |347
sptrembl|Q01916|Q0191  | __________________________________________________
Local hits (HSPs)      |                    ________________________

 Score = 95 (38.5 bits), Expect = 0.21, P = 0.19
 Identities = 42/126 (33%), Positives = 49/126 (38%)

Query:    69 VDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTA 128
             V A L   G+AYG A A    R       G  + +GV P   G     + VGG     T 
Sbjct:   146 VGAGLYGRGAAYGGAGAGLFGREAGFGGAGAGVAAGVGPAGLGNAYGGVGVGG-----TT 200

Query:   129 DFGYSACAAAGVDVAVGT-VGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNV 187
               G  A    GV   VG  VGVG  A  GA  GG      +  +GV  GV    N    V
Sbjct:   201 GVGAGAGVGGGVSGNVGAGVGVGGNAAVGAGVGGAANGGVSANAGVGAGVSG--NTGAGV 258

Query:   188 VDPATG 193
                A+G
Sbjct:   259 GGGASG 264

 Score = 89 (36.4 bits), Expect = 0.99, P = 0.63
 Identities = 61/179 (34%), Positives = 72/179 (40%)

Query:    22 ASLGAGWA-CGVTVVLPPPGTVGA-VDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSA 79
             A L AG+   G  +     G VGA +  RG A G     L           A + AG   
Sbjct:   125 AGLYAGYGGAGAGLYGRGAGGVGAGLYGRGAAYGGAGAGLFGREAGFGGAGAGVAAGVGP 184

Query:    80 YGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSA----C 135
              GL  A G +        GV   +GV   V G V   + VGG N    A  G +A     
Sbjct:   185 AGLGNAYGGVG--VGGTTGVGAGAGVGGGVSGNVGAGVGVGG-NAAVGAGVGGAANGGVS 241

Query:   136 AAAGVDVAV-GTVGVGVGARA-GALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPAT 192
             A AGV   V G  G GVG  A G   GGV +A+A +  GV  G   V  AA   V  AT
Sbjct:   242 ANAGVGAGVSGNTGAGVGGGASGGANGGV-SANAGVGGGVG-GSAGVGGAASTGVGGAT 298


^ = sptrembl|Q9GUB4|Q9GUB4 Heavy-chain fibroin
            (Fragment).//:trembl|AF095240|AF095240_1 gene: "Fib-H"; product:
            "heavy-chain fibroin";  Galleria mellonella heavy-chain fibroin
            (Fib-H) gene, 3' partial cds. //:gp|AF095240|9971735 heavy-chain
            fibroin [Galleria mellonella]
            Length = 443

                        0         90       180       270       360         
                        |          |         |         |         |         |443
sptrembl|Q9GUB4|Q9GUB  | __________________________________________________
Local hits (HSPs)      |                 __________________________________

 Score = 96 (38.9 bits), Expect = 0.24, P = 0.21
 Identities = 86/323 (26%), Positives = 129/323 (39%)

Query:     7 VGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSV 66
             VGG+ +G    L     +GA  A      L   GT GA    GG  G   +        +
Sbjct:   137 VGGLGLGSLGPLGGIGQIGASSAGASGAGLGGVGTAGASGL-GGLGGAGRSSAGSTGAGL 195

Query:    67 RFVDALLLAGGSAYGLAAAD----GVMRWLEEHRRGV---AMDSGVV-PIVPGAVIFDLP 118
               V A   +G SA  LAA+     G +  +++        A  SG   P  PG   +  P
Sbjct:   196 GGVGAGGSSGSSA-ALAASGTSGAGEVIVIDDRSSAASAAAASSGASGPGGPGLGAWG-P 253

Query:   119 VGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL 178
             +GG+   P    G S+ +A+G    +G VG    +  G L GGVG ASA   +G  +G +
Sbjct:   254 LGGFG--P---IGASSGSASGA--GLGGVGAAGTSGLGGL-GGVG-ASAGGSAGAGLGGI 304

Query:   179 AVVNAAGNVVDPATGLPWMADLVGEFAL---RAPPAEQIAALAQLSSP----LGAFNTPF 231
               V ++G+   PA+     A   GE  +   R+  A   AA +  S P    LG    P+
Sbjct:   305 GAVGSSGS--SPASAASG-ASGAGEVIVIDDRSSAASAAAAGSGASGPGGLGLGGLG-PY 360

Query:   232 NTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDG-DTVFALATGAVAVPPEA 290
                IG     AA +P     ++     G A+ I      +       +++  +V+  P  
Sbjct:   361 GG-IGPNVVSAASAPVVGPSVSSVGPVG-AQVIEIGSPVVPSVSRTGSVSRVSVSGRPGV 418

Query:   291 GVPAALSPETQLVTAVGAAAADC 313
              VP +L+   Q V  +G     C
Sbjct:   419 RVPCSLT-RRQFVVKIGTRRQPC 440


^ = swiss|P37391|YY33_MYCLE Hypothetical protein
            ML0373.//:trembl|AL583918|MLEPRTN2_110 gene: "ML0373"; product:
            "conserved hypothetical protein";  Mycobacterium leprae strain TN
            complete genome; segment 2/10 //:gp|AL583918|13092651 conserved
            hypothetical protein [Mycobacterium leprae]
            Length = 473

                        0        100        200        300       400       
                        |          |          |          |         |       |473
swiss|P37391|YY33_MYC  | __________________________________________________
Local hits (HSPs)      |      _________________________          ______

 Score = 81 (33.6 bits), Expect = 0.25, Sum P(2) = 0.22
 Identities = 70/253 (27%), Positives = 108/253 (42%)

Query:    49 GGAPGTRETDLLDPANSVRFVDALLLAGGSAYGLAAADGVMRWLEE-HRRG-VAM-DSG- 104
             GG  G R   ++   ++    DAL  A       AAAD V+   +  HR+  VA   +G 
Sbjct:    47 GGVTGRRVCAVVGSGDNGG--DALWAATFLRRRGAAADAVLLNPDRVHRKALVAFRKAGG 104

Query:   105 -VVPIVPGA--VIFDLPVG--GWN-CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGAL 158
              +V  V  A  ++ D  VG  G    RP A   ++  +A+GV V    +  G+    G +
Sbjct:   105 RIVENVSAATDLVIDGVVGISGSGPLRPAAAAVFATVSASGVPVVAVDLPSGIDVVTGVI 164

Query:   159 KGGVGTASATLQSGVTVGVLAVVNAAG-NVVDPATGLPWMADLVGEFALRAPPAEQIAAL 217
              G    A+ T+  G    V A+ +     +VD    LP  +D++G   L+A     +AA 
Sbjct:   165 NGPAVHAALTVTFGGLKPVHALADCGDVTLVDIGLDLP-DSDILG---LQAA---DVAAY 217

Query:   218 AQLSSPLGAFNTPFNTTI-GVIACDAALSPAA--CRRIAIAAHDGLARTIRPAHTPL--D 272
               +  P G  +  +   + GV+A  +    AA  C   A+AA  G+ R    A+T +   
Sbjct:   218 WPV--P-GVHDDKYTQGVTGVLAGSSTYPGAAVLCTGAAVAATSGMVRYAGSAYTQVLAH 274

Query:   273 GDTVFALATGAVA 285
                V A AT   A
Sbjct:   275 WPEVIASATPTAA 287

 Score = 57 (25.1 bits), Expect = 0.25, Sum P(2) = 0.22
 Identities = 24/70 (34%), Positives = 31/70 (44%)

Query:   273 GDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             G TV  L  G V V  + G P  L+P  Q   A  A + D     VL+G++ A   AG+P
Sbjct:   376 GATV--LLKGNVTVIADPGGPVYLNPAGQSWAAT-AGSGD-----VLSGMIGALLAAGLP 427

Query:   333 TYRDMFPGAF 342
                     AF
Sbjct:   428 AAEAAAAAAF 437


^ = swiss|P15502|ELS_HUMAN Elastin precursor
            (Tropoelastin).//:trembl|M36860|HSELASF_1 gene: "ELN";  Human
            elastin mRNA, complete cds. //:gp|M36860|182062 elastin precursor
            [Homo sapiens]
            Length = 730

                        0        150        300       450       600        
                        |          |          |         |         |        |730
swiss|P15502|ELS_HUMA  | __________________________________________________
Local hits (HSPs)      |             ___________________________

 Score = 98 (39.6 bits), Expect = 0.27, P = 0.24
 Identities = 87/336 (25%), Positives = 119/336 (35%)

Query:     9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
             G  VG        A   A +  G   VLP  G  G     G  PG      +  PA +  
Sbjct:   247 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 306

Query:    68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
                A   A  G+A GL         GV+        GV +    +P+VPGA I    V G
Sbjct:   307 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 366

Query:   122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVG-V 177
                   A    +  A  G    VG  G+   G  AG   G GVG       +GV +VG V
Sbjct:   367 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGGV 426

Query:   178 LAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
               V    G  + P       A    ++ +  P A    A A+ ++     N       GV
Sbjct:   427 PGVGGVPGVGISPEAQAAAAAK-AAKYGVGTPAAAAAKAAAK-AAQFALLNLA-GLVPGV 483

Query:   238 -IACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAAL 296
              +A    ++P     + +A   GLA  +  A  P  G     +A G V V P  G P  +
Sbjct:   484 GVAPGVGVAPG----VGVAPGVGLAPGVGVA--PGVG-----VAPG-VGVAPGIG-PGGV 530

Query:   297 SPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             +   +    V A A    A  + AG+       G+P
Sbjct:   531 AAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVP 566

 Score = 89 (36.4 bits), Expect = 2.7, P = 0.93
 Identities = 69/259 (26%), Positives = 89/259 (34%)

Query:    98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
             GV   +GV P  PG       +P VG +   +P    GY   A       G+    G + 
Sbjct:   168 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 227

Query:   149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
              G G   G + G  G A     +G  VG  A   AA         G   +   VG   + 
Sbjct:   228 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283

Query:   208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
               P     A+  +    G   TP        A  AA   AA     +    G    +   
Sbjct:   284 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 334

Query:   268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
               P  G     +    + V P AG+P A  P   +V+    AAA   A+A   G      
Sbjct:   335 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 390

Query:   328 VAGIPTY---RDMFPGAFG 343
             V GIPTY      FPG FG
Sbjct:   391 VGGIPTYGVGAGGFPG-FG 408


^ = sptrembl|Q8DS95|Q8DS95 Hypothetical protein.//:trembl|AE015016|AE015016_9
            gene: "SMU.1914c"; product: "hypothetical protein";  Streptococcus
            mutans UA159 section 164 of 185 of the complete genome.
            //:gp|AE015016|24378275 hypothetical protein SMU.1914c
            [Streptococcus mutans UA159]
            Length = 76

                        0            20           40           60          
                        |             |            |            |          |76
sptrembl|Q8DS95|Q8DS9  | __________________________________________________
Local hits (HSPs)      |                   _____________________________

 Score = 72 (30.4 bits), Expect = 0.30, P = 0.26
 Identities = 18/47 (38%), Positives = 22/47 (46%)

Query:   121 GWNCRP--TADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTA 165
             GWNC        G    A AG    +G   +G GA  GA+ GG+G A
Sbjct:    26 GWNCAAGIALGAGQGYMATAGGTAFLGPYAIGTGA-FGAIAGGIGGA 71


^ = sptrembl|Q28098|Q28098 Elastin (Fragment).//:trembl|M19372|BTEG8_3 Bovine
            elastin gene, exon 1. //:gp|M19372|163002 elastin [Bos taurus]
            Length = 707

                        0        150        300        450       600       
                        |          |          |          |         |       |707
sptrembl|Q28098|Q2809  | __________________________________________________
Local hits (HSPs)      |      _________________________________________

 Score = 97 (39.2 bits), Expect = 0.34, P = 0.29
 Identities = 72/269 (26%), Positives = 97/269 (36%)

Query:    22 ASLGAGWACGVTVVLP-PPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAY 80
             A +GAG    +  ++P  PG +  V   GG PG     +   A +     A     G   
Sbjct:   392 AKIGAGGVGALGGLVPGAPGAIPGVPGVGGVPGV---GIPAAAAAKAAAKAAQFGLGPGV 448

Query:    81 GLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVI-FDLPVGGWNCRPTADFGYSACAAAG 139
             G+A   GV+  +     GV +  G+  + PG VI   +P    +    A       AAAG
Sbjct:   449 GVAPGVGVVPGVGVVP-GVGVAPGI-GLGPGGVIGAGVPAAAKSAAKAAAKAQFR-AAAG 505

Query:   140 VDVAVGTVGVGVGARA-GALKG--GVGTASATLQSGVTVGVLAVVNAA----------GN 186
             +   V  +GVGVG    G   G  G+G  +     G   G LA   AA          G 
Sbjct:   506 LPAGVPGLGVGVGVPGLGVGVGVPGLGVGAGVPGFGAVPGTLAAAKAAKFGPGGVGALGG 565

Query:   187 VVD-PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALS 245
             V D    G+P     VG  A  A  A   AA   L    G          G +     +S
Sbjct:   566 VGDLGGAGIPGGVAGVGPAAAAAAKAAAKAAQFGLGGVGGLGVGGLGAVPGAVGL-GGVS 624

Query:   246 PAACRRIAIAAHDGLARTIRPAHT-PLDG 273
             PAA  + A     GL   +      P+ G
Sbjct:   625 PAAAAKAAKFGAAGLGGVLGAGQPFPIGG 653

 Score = 91 (37.1 bits), Expect = 1.5, P = 0.79
 Identities = 72/275 (26%), Positives = 93/275 (33%)

Query:    75 AGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSA 134
             AG + Y      G        +    + +G   ++PG  +    + G    P A  G   
Sbjct:   195 AGKAGYPTGTGVGPQAAAAAAKAAAKLGAGGAGVLPGVGVGGAGIPG---APGAIPGIGG 251

Query:   135 CAAAGV-DVAVGTVGVGVGARAGALKG--GVGTASATLQS-GVT-VGVLAV-VNAAG--N 186
              A  G  D A         A+ GA  G  GVG     +   GV  VGV  V V   G   
Sbjct:   252 IAGVGAPDAAAAAAAAAKAAKFGAAGGFPGVGVPGVGVPGVGVPGVGVPGVGVPGVGVPG 311

Query:   187 VVDPATGLPWMA-DLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALS 245
             V  P  G+P +    VG   +  P A   AA A+ ++    F       IG I     + 
Sbjct:   312 VGVPGVGVPGVGVPGVGVPGVGVPGAVSPAAAAKAAAKAAKFGARGGVGIGGIPT-FGVG 370

Query:   246 PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTA 305
             P     I  AA    A   + A     G  V AL  G V   P A +P    P    V  
Sbjct:   371 PGGFPGIGDAAAAQAAAAAKAAKIGAGG--VGALG-GLVPGAPGA-IPGV--PGVGGVPG 424

Query:   306 VGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPG 340
             VG  AA     A  A      P  G+     + PG
Sbjct:   425 VGIPAAAAAKAAAKAAQFGLGPGVGVAPGVGVVPG 459

 Score = 84 (34.6 bits), Expect = 9.0, P = 1.0
 Identities = 71/236 (30%), Positives = 91/236 (38%)

Query:     1 MNSITDVGGIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLL 60
             +  I  VGG+ V     + P   LGAG   GV      PG V  V    G PG     +L
Sbjct:    62 VGGIGGVGGLGVST-GAVVPQ--LGAGVGAGVK-----PGKVPGV----GLPGVYPGGVL 109

Query:    61 DPANSVRFVDALLLAG---GSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVP-GAVIF- 115
              P    RF    +L G   G+     A  G   +      GV    G  P VP G  I  
Sbjct:   110 -PGAGARFPGIGVLPGVPTGAGVKPKAPGGGGAFAGIP--GVGPFGGQQPGVPLGYPIKA 166

Query:   116 -DLPVG-GWNCRP-TADFGYSACAAAGVDVAVG-TVGVGVGARAGALKGGVGTASATLQS 171
               LP G G   +     +G+     AG     G   G GVG +A A       A+A L +
Sbjct:   167 PKLPAGYGLPYKTGKLPYGFGPGGVAGSAGKAGYPTGTGVGPQAAA---AAAKAAAKLGA 223

Query:   172 GVTVGVLAVVNAAGNVVDPATG-LPWMADLVGEFALRAPPAEQIAALAQLSSPLGA 226
             G   GVL  V   G  +  A G +P +  + G   + AP A   AA A  ++  GA
Sbjct:   224 G-GAGVLPGVGVGGAGIPGAPGAIPGIGGIAG---VGAPDAAAAAAAAAKAAKFGA 275


^ = sptrembl|Q01914|Q01914 IpiB2 protein precursor.//:trembl|L23937|PIIBIB2B_1
            gene: "ipiB2";  Phytophthora infestans ipiB2 gene, complete cds.
            //:gp|L23937|397687 ipiB2 [Phytophthora infestans]
            Length = 343

                        0         70       140       210       280         
                        |          |         |         |         |         |343
sptrembl|Q01914|Q0191  | __________________________________________________
Local hits (HSPs)      |             _______________________________

 Score = 93 (37.8 bits), Expect = 0.35, P = 0.29
 Identities = 61/189 (32%), Positives = 72/189 (38%)

Query:     8 GGIRVGHYQRLDPDASLGAGWA-CGVTVVLPPPGTVGA-VDCRGGAPGTRETDLLDPANS 65
             GG+  G Y R       GAG+   G  +     G VGA +  RG   G     L      
Sbjct:    82 GGVGAGLYGR-------GAGYGGAGAGLYGRGAGGVGAGLYGRGAGYGGAGAGLY--GRG 132

Query:    66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCR 125
                V A L   G+AYG A A G+     E   G A  +GV   V GA + +   GG    
Sbjct:   133 AGGVGAGLYGRGAAYGGAGA-GLFG--REAGYGGA-GAGVGAGVGGAGLGN-GYGGVGVG 187

Query:   126 PTADFGYSACAAAGVDVAVGT-VGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAA 184
              T   G  A    GV   VG  VGVG  A  GA  GG         +GV  GV    N  
Sbjct:   188 GTTGVGAGAGVGGGVSGNVGAGVGVGGNAAVGAGVGGAANGGVGANAGVGAGVSG--NTG 245

Query:   185 GNVVDPATG 193
               V   A+G
Sbjct:   246 AGVGGGASG 254

 Score = 85 (35.0 bits), Expect = 2.7, P = 0.93
 Identities = 64/202 (31%), Positives = 77/202 (38%)

Query:     8 GGIRVGHYQRLDPDASLGAGWA-CGVTVVLPPPGTVGA-VDCRGGAPGTRETDLLDPANS 65
             GG+  G Y R       GAG+   G  +     G VGA +  RG A G     L      
Sbjct:   108 GGVGAGLYGR-------GAGYGGAGAGLYGRGAGGVGAGLYGRGAAYGGAGAGLFGREAG 160

Query:    66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCR 125
                  A + AG    GL    G +        GV   +GV   V G V   + VGG N  
Sbjct:   161 YGGAGAGVGAGVGGAGLGNGYGGVG--VGGTTGVGAGAGVGGGVSGNVGAGVGVGG-NAA 217

Query:   126 PTADFGYSAC----AAAGVDVAV-GTVGVGVGARA-GALKGGVGTASATLQSGV--TVGV 177
               A  G +A     A AGV   V G  G GVG  A G   GGV +A+A +  GV  + GV
Sbjct:   218 VGAGVGGAANGGVGANAGVGAGVSGNTGAGVGGGASGGANGGV-SANAGVGGGVGGSAGV 276

Query:   178 LAVVNAAGNVVDPATGLPWMAD 199
                V   G     A G     D
Sbjct:   277 GGSVGVGGAASTGAGGATTTTD 298


^ = sptrembl|Q9S209|Q9S209 Hypothetical protein
            SCO1791.//:trembl|AL939110|SCO939110_94 gene: "SCO1791";
            "SCI51.31c"; product: "hypothetical protein";  Streptomyces
            coelicolor A3(2) complete genome; segment 7/29
            //:pironly|T36894|T36894 hypothetical protein SCI51.31c -
            Streptomyces coelicolor//:gp|AL939110|5738507 hypothetical protein
            [Streptomyces coelicolor A3(2)]
            Length = 419

                        0         90        180        270       360       
                        |          |          |          |         |       |419
sptrembl|Q9S209|Q9S20  | __________________________________________________
Local hits (HSPs)      |    __________________________________

 Score = 94 (38.1 bits), Expect = 0.36, P = 0.30
 Identities = 55/208 (26%), Positives = 80/208 (38%)

Query:   126 PTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAG 185
             PT D   SA +A G  V V T G+  G   G+ +  VG  +    +  +V     V   G
Sbjct:    17 PTTD--RSATSADGTVVTVATAGISAGTAVGSAETTVGATTVADSAVASVVTTETVGRVG 74

Query:   186 NV-VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAF--NTPFNTTIGVIACDA 242
              + +  ATG+     + G   +R  P+   AA   +S   GA    T   T   V+    
Sbjct:    75 TIAIVVATGVS--VAMTGVVTVR--PS---AATTVVSVGTGATVPRTVATTAESVVTAPP 127

Query:   243 ALSPAACRRIA-IAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQ 301
             ++   A   +  I A   +        T + G T  A+ T A  V     VPA     T 
Sbjct:   128 SVGTIAVMTVVTIGAMTAVGSAAASVVTTV-GMT--AVMTAATVVARTTAVPATGVGTTG 184

Query:   302 LVTAVGAAAADCLARAVLAGVLNAQPVA 329
              V A GA+ A       + GV+  +P A
Sbjct:   185 TVAATGASVA-------MTGVVTVRPSA 205

 Score = 94 (38.1 bits), Expect = 0.36, P = 0.30
 Identities = 63/235 (26%), Positives = 98/235 (41%)

Query:    99 VAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGAL 158
             VAM +GVV + P A    + VG     P      +A +      +VGT+ V      GA+
Sbjct:    86 VAM-TGVVTVRPSAATTVVSVGTGATVPRT-VATTAESVVTAPPSVGTIAVMTVVTIGAM 143

Query:   159 KGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALA 218
                VG+A+A++ +  TVG+ AV+ AA  VV   T +P  A  VG     A     +A   
Sbjct:   144 TA-VGSAAASVVT--TVGMTAVMTAA-TVVARTTAVP--ATGVGTTGTVAATGASVAMTG 197

Query:   219 QLSSPLGAFNTPFNTTIGV-IACDAALSPAACRRIA-IAAHDGLARTIRPAHTPLDGDTV 276
              ++    A  T  +   G  +    A +     R   + A   +  T+ P+     G TV
Sbjct:   198 VVTVRPSAATTVVSVGTGATVPRTVATTGVTVPRTGGMTAVTTVGMTVLPSGAMTVGMTV 257

Query:   277 FALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGI 331
               L +GA+      GV +A++  T L + V   A   +   + +GV  A     I
Sbjct:   258 --LPSGAMT-----GVTSAVT--TVLPSGVTTGAMTAVTTVLPSGVTTAVTTVAI 303


^ = swiss|Q8DHN4|ARGJ_SYNEL Arginine biosynthesis bifunctional protein argJ
            [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
            acetyltransferase) (Ornithine transacetylase) (OATase); Amino-acid
            acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGS)]
            [Contains: Arginine biosynthesis bifunctional protein argJ alpha
            chain; Arginine biosynthesis bifunctional protein argJ beta
            chain].//:trembl|AP005375|AP005375_192 gene: "argJ";
            Thermosynechococcus elongatus BP-1 DNA, complete genome, section
            7/9. //:gp|AP005375|22295637 ORF_ID:tll1911~arginine biosynthesis
            bifunctional protein ArgJ includes glutamate n-acetyltransferase
            and amino-acid acetyltransferase [Thermosynechococcus elongatus
            BP-1]
            Length = 419

                        0         90        180        270       360       
                        |          |          |          |         |       |419
swiss|Q8DHN4|ARGJ_SYN  | __________________________________________________
Local hits (HSPs)      |                    ______________

 Score = 94 (38.1 bits), Expect = 0.36, P = 0.30
 Identities = 35/119 (29%), Positives = 50/119 (42%)

Query:   199 DLVG-EFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAH 257
             DLV  + AL A    Q   +  ++   G  +    T +  I CDAA+SP   + +   A 
Sbjct:   156 DLVPKQIALEAEWEGQTIRIGGMAKGSGMIHPKMATMLAFITCDAAVSPHLWQEMLQRAC 215

Query:   258 DGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLAR 316
             D     I         D+V ALA G    P  A   AA +   +++TAV    A  +AR
Sbjct:   216 DRSFNQITVDGDTSTNDSVIALANGQSRTPAIAEPGAAATRLEEMLTAVCVHLAKAIAR 274


^ = sptrembl|Q14234|Q14234 Elastin.//:trembl|M17282|HSEL20_3 gene: "ELN";
            product: "elastin";  Human elastin gene, exon 1.
            //:gp|M17282|182021 elastin [Homo sapiens]
            Length = 757

                        0        160        320        480       640       
                        |          |          |          |         |       |757
sptrembl|Q14234|Q1423  | __________________________________________________
Local hits (HSPs)      |             ______________________________________

 Score = 97 (39.2 bits), Expect = 0.37, P = 0.31
 Identities = 71/252 (28%), Positives = 94/252 (37%)

Query:    98 GVAMDSGVVP-IVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVD---VAVGTVGVGVGA 153
             GVA   GV P I PG V              A    +A   AG+    V VG  G+GVGA
Sbjct:   508 GVAPGVGVAPGIGPGGVAAAAKSAA-KVAAKAQLRAAAGLGAGIPGLGVGVGVPGLGVGA 566

Query:   154 RAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATG-----LPWMADLVGEFALRA 208
                 L  GVG       +G   GV   ++      DP++       P    + G  A  A
Sbjct:   567 GVPGL--GVGAGVPGFGAGADEGVRRSLSPELREGDPSSSQHLPSTPSSPRVPGALAA-A 623

Query:   209 PPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAH 268
               A+  AA+  +   LGA         GV+    A + AA +  A AA  GL        
Sbjct:   624 KAAKYGAAVPGVLGGLGALGG-VGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGG 682

Query:   269 TPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQPV 328
               + G  V  +  G   +PP A   AA      L   +G A      +  L GV  A+P 
Sbjct:   683 LGVGGLGVPGVG-GLGGIPPAAAAKAAKYGAAGLGGVLGGAG-----QFPLGGVA-ARPG 735

Query:   329 AGIPTYRDMFPG 340
              G+     +FPG
Sbjct:   736 FGLSP---IFPG 744

 Score = 95 (38.5 bits), Expect = 0.61, P = 0.46
 Identities = 89/339 (26%), Positives = 120/339 (35%)

Query:     9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
             G  VG        A   A +  G   VLP  G  G     G  PG      +  PA +  
Sbjct:   247 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 306

Query:    68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
                A   A  G+A GL         GV+        GV +    +P+VPGA I    V G
Sbjct:   307 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 366

Query:   122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGTASATLQSGV-TVGVL 178
                   A    +  A  G    VG  G+   G  AG   G GVG       +GV +VG  
Sbjct:   367 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVAGVPSVGG- 425

Query:   179 AVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQ-IAALAQLSSPLGAFNTPFNTTIGV 237
               V   G V  P  G+   A    + A  A  A+  +   A  ++   A    F    GV
Sbjct:   426 --VPGVGGV--PGVGISPEA----QAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGLVPGV 477

Query:   238 -IACDAALSPAACRRIAIAAHDGLARTI--RPAHTPLDGDTVF-ALATGAVAVPPEAGVP 293
              +A    ++P     + +A   GLA  +   P      G  V   +  G VA   ++   
Sbjct:   478 GVAPGVGVAPG----VGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSA-- 531

Query:   294 AALSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             A ++ + QL  A G  A       V  GV      AG+P
Sbjct:   532 AKVAAKAQLRAAAGLGAG-IPGLGVGVGVPGLGVGAGVP 569

 Score = 89 (36.4 bits), Expect = 2.8, P = 0.94
 Identities = 69/259 (26%), Positives = 89/259 (34%)

Query:    98 GVAMDSGVVPIVPGA--VIFDLP-VGGWNC-RPTADFGYSACAAA-----GVDVAVGTVG 148
             GV   +GV P  PG       +P VG +   +P    GY   A       G+    G + 
Sbjct:   168 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGGYGLPYTTGKLP 227

Query:   149 VGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDP-ATGLPWMADLVGEFALR 207
              G G   G + G  G A     +G  VG  A   AA         G   +   VG   + 
Sbjct:   228 YGYGP--GGVAGAAGKAG--YPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVP 283

Query:   208 APPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPA 267
               P     A+  +    G   TP        A  AA   AA     +    G    +   
Sbjct:   284 GVPG----AIPGIGGIAGV-GTPAAAAAAAAAAKAAKYGAAAG--LVPGGPGFGPGV--V 334

Query:   268 HTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLARAVLAGVLNAQP 327
               P  G     +    + V P AG+P A  P   +V+    AAA   A+A   G      
Sbjct:   335 GVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG--VVSP--EAAAKAAAKAAKYGARPGVG 390

Query:   328 VAGIPTY---RDMFPGAFG 343
             V GIPTY      FPG FG
Sbjct:   391 VGGIPTYGVGAGGFPG-FG 408


^ = sptrembl|Q8G9V7|Q8G9V7 Hypothetical protein.//:trembl|AJ494981|ECO494981_61
            product: "hypothetical protein";  Escherichia coli pathogenicity
            island II, strain 536 //:gp|AJ494981|23954279 hypothetical protein
            [Escherichia coli]
            Length = 92

                        0         20         40         60         80      
                        |          |          |          |          |      |92
sptrembl|Q8G9V7|Q8G9V  | __________________________________________________
Local hits (HSPs)      |         ________________________

 Score = 71 (30.1 bits), Expect = 0.39, P = 0.32
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query:   124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
             C   AD   + C AA V++ +G   VG G     +KG VG  +A + SGV
Sbjct:    16 CIEAAD---AMCKAANVEL-IGYENVGSGLVTAMVKGDVGAVNAAVDSGV 61


^ = swiss|P54320|ELS_MOUSE Elastin precursor
            (Tropoelastin).//:trembl|U08210|MM08210_1 product: "tropoelastin";
            Mus musculus tropoelastin mRNA, complete cds. //:gp|U08210|473274
            tropoelastin [Mus musculus]
            Length = 860

                        0        180        360       540       720        
                        |          |          |         |         |        |860
swiss|P54320|ELS_MOUS  | __________________________________________________
Local hits (HSPs)      |                   __________________

 Score = 97 (39.2 bits), Expect = 0.43, P = 0.35
 Identities = 76/275 (27%), Positives = 93/275 (33%)

Query:    75 AGGSAYGLAAADGV-MRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYS 133
             AGG A G     GV  +      +     +G   ++PG     +P GG    P    G  
Sbjct:   296 AGGKA-GYPTGTGVGSQAAAAAAKAAKYGAGGAGVLPGVGGGGIP-GGAGAIP----GIG 349

Query:   134 ACAAAGVDVAVGTVGVGV-----GARAGALKGGVGTASATLQSGVT-VGVLAVVNAAGNV 187
               A AG   A             GA  G + GG G       +G+  VG +  V     V
Sbjct:   350 GIAGAGTPAAAAAAKAAAKAAKYGAAGGLVPGGPGVRLPG--AGIPGVGGIPGVGGIPGV 407

Query:   188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTP-FNTTIGV-----IACD 241
               P  G P +    G  A+    A + AA A      G    P +    G      +   
Sbjct:   408 GGPGIGGPGIVG--GPGAVSPAAAAKAAAKAAKYGARGGVGIPTYGVGAGGFPGYGVGAG 465

Query:   242 AAL---SPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAV-AVPPEAGVPAALS 297
             A L   SPAA    A AA  G       A   L    V     GAV AVP   GVP A +
Sbjct:   466 AGLGGASPAAAAAAAKAAKYGAGGA--GALGGLVPGAVPGALPGAVPAVPGAGGVPGAGT 523

Query:   298 PETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIP 332
             P      A   AAA       + GV     V GIP
Sbjct:   524 PAAAAAAAAAKAAAKAGLGPGVGGVPGGVGVGGIP 558

 Score = 89 (36.4 bits), Expect = 3.2, P = 0.96
 Identities = 40/124 (32%), Positives = 51/124 (41%)

Query:   104 GVVPIVPGAVIFDLPVGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVG 163
             G VP VPGA    +P  G      A     A A AG+   VG V  GVG   G + GGVG
Sbjct:   507 GAVPAVPGAG--GVPGAGTPAAAAAAAAAKAAAKAGLGPGVGGVPGGVGV--GGIPGGVG 562

Query:   164 TASATLQSGVTVGVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP 223
                  +  GV  G +  + A    +  A G P  A    + A +A    Q  A A L + 
Sbjct:   563 VGG--VPGGVGPGGVTGIGAGPGGLGGA-GSPAAAKSAAKAAAKA----QYRAAAGLGAG 615

Query:   224 LGAF 227
             +  F
Sbjct:   616 VPGF 619


^ = sptrembl|Q98JW2|Q98JW2 Hypothetical protein
            mll1751.//:trembl|AP002998|AP002998_75 gene: "mll1751";
            Mesorhizobium loti DNA, complete genome, section 5/21.
            //:gp|AP002998|14022444 hypothetical protein [Mesorhizobium loti]
            Length = 251

                        0        50       100       150       200       250
                        |         |         |         |         |         |251
sptrembl|Q98JW2|Q98JW  | __________________________________________________
Local hits (HSPs)      |              ____________

 Score = 90 (36.7 bits), Expect = 0.44, P = 0.36
 Identities = 28/69 (40%), Positives = 36/69 (52%)

Query:   119 VGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL 178
             VGG N    A+ G S  A+AG+  ++G  G G  A AGA  GG  +ASA L  G +VG  
Sbjct:    68 VGGSNAGAGANVGGSNSASAGLGASIGGGG-GSNAGAGANVGGSNSASAGL--GASVGGS 124

Query:   179 AVVNAAGNV 187
               +N    V
Sbjct:   125 GGINTGAGV 133


^ = sptrembl|Q9HQP1|Q9HQP1 Vng1069c.//:trembl|AE005039|AE005039_11 gene:
            "VNG1069C"; product: "Vng1069c";  Halobacterium sp. NRC-1 section
            70 of 170 of the complete genome. //:pironly|D84263|D84263
            hypothetical protein Vng1069c [imported] - Halobacterium sp.
            NRC-1//:gp|AE005039|10580618 Vng1069c [Halobacterium sp. NRC-1]
            Length = 296

                        0         60       120       180       240         
                        |          |         |         |         |         |296
sptrembl|Q9HQP1|Q9HQP  | __________________________________________________
Local hits (HSPs)      |        _________________________________________

 Score = 91 (37.1 bits), Expect = 0.45, P = 0.37
 Identities = 71/268 (26%), Positives = 99/268 (36%)

Query:    66 VRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVP-IVPGAVIFDLPVGGWNC 124
             V  V AL+   GS  G A     +R L+     V + +GVV  +V  A + D+    +  
Sbjct:    37 VATVVALVPRLGSRDGRATVAETLRALDVPFLAV-LGAGVVSAVVTVASVVDV---AYTQ 92

Query:   125 RPTADFGYS-ACAAAGVDVAVGTVGVGVGARAGALKGGVGTA---SATLQSGVTVGVLAV 180
              P   F +     AA V V +G V V    R GA  GG   A   SA   +G     LAV
Sbjct:    93 YPGLTFAFFFGLIAASVVVLIGEVAVDTPGRIGAALGGFALAFAVSAQATAGTLPDGLAV 152

Query:   181 VNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC 240
             +   G V   A  LP ++   G   L          L +  +   A +T  +        
Sbjct:   153 MVVTGAVAICAMVLPGVS---GSLIL--------LTLGKYETMTSAVSTAVDAVAAGALG 201

Query:   241 DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
             DA    A     ++ A  G+    R     L     +  AT    V   AG  A  +P  
Sbjct:   202 DAVAPVATLAAFSLGALAGVLTFARVVQWAL---AEYRAATVTFLVALMAG--ALRAPAV 256

Query:   301 QLVTAVGAAAADCLARAVLAGVLNAQPV 328
             ++  A  A     +A  V AGV+ A  V
Sbjct:   257 RIADATAAWTVGSVAPLVAAGVVGAAAV 284


^ = sptrembl|Q8G9V6|Q8G9V6 Hypothetical protein.//:trembl|AJ494981|ECO494981_62
            product: "hypothetical protein";  Escherichia coli pathogenicity
            island II, strain 536 //:gp|AJ494981|23954280 hypothetical protein
            [Escherichia coli]
            Length = 94

                        0         20         40         60        80       
                        |          |          |          |         |       |94
sptrembl|Q8G9V6|Q8G9V  | __________________________________________________
Local hits (HSPs)      |          _______________________

 Score = 70 (29.7 bits), Expect = 0.50, P = 0.39
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:   124 CRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGV 173
             C   AD   + C AA V++ +G   VG G     +KG VG   A + SGV
Sbjct:    16 CIEAAD---AMCKAANVEL-IGYENVGSGLVTAMVKGDVGAVKAAVDSGV 61


^ = sptrembl|Q8PGR8|Q8PGR8 Outer membrane protein.//:trembl|AE012004|AE012004_2
            gene: "xadA"; product: "outer membrane protein";  Xanthomonas
            axonopodis pv. citri str. 306,  section 382 of 469 of the complete
            genome. //:gp|AE012004|21109920 outer membrane protein [Xanthomonas
            axonopodis pv. citri str. 306]
            Length = 1114

                        0        230        460       690       920        
                        |          |          |         |         |        |1114
sptrembl|Q8PGR8|Q8PGR  | __________________________________________________
Local hits (HSPs)      |          ________

 Score = 97 (39.2 bits), Expect = 0.58, P = 0.44
 Identities = 57/190 (30%), Positives = 80/190 (42%)

Query:    18 LDPDAS-LG--AGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLL 74
             LD DA+ +G  A  A   ++ L    TV   D  G   G RE            V    L
Sbjct:   192 LDRDATAIGHNAAAAGESSIALGGVATVFDYDANGFVVGQREQATQASGVGATAVGGGAL 251

Query:    75 AG---GSAYGL-AAADGVMRWLEEHRRGVAMDSGV-VPIVPGAVIFDLPVGGWNCRPTAD 129
             AG    SA G  A+A GV      +R   + D    V  +  A  F    GG++ R +AD
Sbjct:   252 AGTPYASAIGSGASASGVQSTALGYRAQTSSDGATAVGGLSSASGFLSTAGGYSSRASAD 311

Query:   130 ----FGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGT-ASATLQSGVTVGVLAVVNAA 184
                 FGY A +     VAVG   +  GA++  + GGV    S T  +G+  G +A+ + A
Sbjct:   312 TSTAFGYRARSDGASSVAVGDTSLASGAQS-VVVGGVSNFGSITAATGL--GGIALGSGA 368

Query:   185 GNVVDPATGL 194
              +  D A  +
Sbjct:   369 QSQSDYAIAI 378


^ = swissnew|P02834|HMUX_DROME Homeotic Ultrabithorax
            protein.//:swiss|P02834|HMUX_DROME Homeotic Ultrabithorax
            protein.//:trembl|AE003714|AE003714_29 gene: "Ubx"; product:
            "CG10388-PA";  Drosophila melanogaster chromosome 3R, section 52 of
            118 of the complete sequence. //:trembl|AF099983|AF099983_1
            product: "Ultrabithorax";  Drosophila simulans Ultrabithorax gene,
            exon 4 and complete cds. //:trembl|X05723|DMUBX1_1 gene: "Ubx";
            product: "Ultrabithorax gene product";  Drosophila melanogaster Ubx
            gene for Ultrabithorax, exon 1 and joined CDS
            //:trembl|X76210|DMUBXGENE_1 gene: "Ubx"; product: "homeotic
            ultrabithorax protein";  D.melanogaster mRNA for homeotic
            ultrabithorax protein //:gp|AE003714|10726569 CG10388-PA
            [Drosophila melanogaster]//:gp|AF099983|4323521 Ultrabithorax
            [Drosophila simulans]//:gp|X05723|829190 Ultrabithorax gene product
            [Drosophila melanogaster]//:gp|X76210|433477 homeotic ultrabithorax
            protein [Drosophila melanogaster]
            Length = 389

                        0         80        160       240       320        
                        |          |          |         |         |        |389
swissnew|P02834|HMUX_  | __________________________________________________
Local hits (HSPs)      |                 ________________

 Score = 91 (37.1 bits), Expect = 0.70, P = 0.50
 Identities = 42/134 (31%), Positives = 56/134 (41%)

Query:    76 GGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSAC 135
             GG A G   A         +  G    +G +P+ P A   D  VGG+    T+  G S  
Sbjct:   121 GGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGY--LDTS--GGSPV 176

Query:   136 AAAGVDVAVGTVGVGVG-ARAGALKGGVGTASA--TLQSGVTVGVLAVVNAAGNVVDPA- 191
             +  G   A G V V  G   AG ++ GVG A A     +  T+   A   AA + +  A 
Sbjct:   177 SHRGGS-AGGNVSVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQAS 235

Query:   192 --TGLPWMADLVGE 203
               T  PWMA + GE
Sbjct:   236 NHTFYPWMA-IAGE 248


^ = sptrembl|Q8VC49|Q8VC49 Similar to TLH29
            protein.//:trembl|BC021795|BC021795_1 product: "RIKEN cDNA
            1810023F06";  Mus musculus RIKEN cDNA 1810023F06 gene, mRNA (cDNA
            clone MGC:25891 IMAGE:4217067), complete cds.
            //:gp|BC021795|18257335 RIKEN cDNA 1810023F06 [Mus
            musculus]//:gpnew|BC021795|18257335 hypothetical protein BC021795
            [Mus musculus]
            Length = 283

                        0         60        120        180       240       
                        |          |          |          |         |       |283
sptrembl|Q8VC49|Q8VC4  | __________________________________________________
Local hits (HSPs)      |   ____________________________________

 Score = 89 (36.4 bits), Expect = 0.71, P = 0.51
 Identities = 54/214 (25%), Positives = 76/214 (35%)

Query:   119 VGGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGG---VGTASATLQSGVTV 175
             +GG      A    SA    G  +A G++   + + A    GG    G   ATLQS   +
Sbjct:    10 IGGALAVAGAPVALSAVGFTGAGIAAGSIAAKMMSAAAIANGGGIAAGGLVATLQSVGVL 69

Query:   176 GVLAVVNAAGNVVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP---------LGA 226
             G+  + N     V  ATG      +       + P +    L +   P         LG 
Sbjct:    70 GLSTITNIILVAVGTATGARAEGSMGASREQESGPQDPPQELQEPQEPPSCKKQDLNLGK 129

Query:   227 F-NTPFNTTIGVIACDAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVA 285
             F        + V     ALS        IAA   +A  +  A    +G  +   A G VA
Sbjct:   130 FVGAAIGGALAVAGAPIALSAVGFTGAGIAA-GSIAAKMMSAAAIANGGGI--AAGGLVA 186

Query:   286 VPPEAGVPAALSPETQLVT-AVGAAAADCLARAV 318
                  G+   LS  T ++  AVGAA     A A+
Sbjct:   187 TLQSVGI-LGLSTSTNIILGAVGAATGATAAGAM 219


^ = sptrembl|Q9WX72|Q9WX72 Hypothetical protein (ORF569
            protein).//:trembl|AB015803|AB015803_8 gene: "ORF569";  Acetobacter
            xylinus ORF200, ORF569, bcsABII-A, bcsX, bcxY, bcsCII and ORF569
            genes, complete cds. //:gp|AB015803|4827171 ORF569
            [Gluconacetobacter xylinus]
            Length = 569

                        0        120        240        360       480       
                        |          |          |          |         |       |569
sptrembl|Q9WX72|Q9WX7  | __________________________________________________
Local hits (HSPs)      |                              __________________

 Score = 93 (37.8 bits), Expect = 0.71, P = 0.51
 Identities = 56/212 (26%), Positives = 87/212 (41%)

Query:   136 AAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSG--VTVGVLAVVNAAGNVVDPAT 192
             A  G  +A G +G  V       +G   G  +  + +G   T   +     AG V D A 
Sbjct:   324 ALPGGTLAGGYIGYNVDGGPWFAQGRNTGQWTGIVIAGHAPTPDEVQAFAVAGAVADDA- 382

Query:   193 GLPWMADL---VGEFALRA---PPAEQIAALAQLSSPLGAFNTPFN--TT---IGVIACD 241
              +P + D+   +G+        P       L Q  +   ++N   +  TT   +G++   
Sbjct:   383 -MPQLRDVLVTIGDSRTEGFVVPDGRNWPYLMQRFARYRSYNLAVSGATTRHMLGMLPAA 441

Query:   242 AALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQ 301
              A++    RR+A+    G    +   H P D +TV  LAT    +  +AG   AL  E Q
Sbjct:   442 EAVARGGARRLAVV-FGGYNDHLPGNHIPTD-ETVRNLATITGRLK-QAGYTVALIEEAQ 498

Query:   302 LVTAVGAAAADCLARAVLAGVLNAQPVA-GIP 332
                A  AA  D +AR +LA  +   P A G+P
Sbjct:   499 TTGAPRAAIHDAIARGILAPDIALDPFAPGLP 530


^ = sptrembl|O33312|O33312 PPE-family protein.//:trembl|AE007111|AE007111_8
            gene: "MT2840"; product: "PPE family protein";  Mycobacterium
            tuberculosis CDC1551,  section 197 of 280 of the complete genome.
            //:pironly|A70882|A70882 probable PPE protein - Mycobacterium
            tuberculosis (strain H37RV)//:gp|AE007111|13882603 PPE family
            protein [Mycobacterium tuberculosis CDC1551]
            Length = 402

                        0        80       160       240       320       400
                        |         |         |         |         |         |402
sptrembl|O33312|O3331  | __________________________________________________
Local hits (HSPs)      | _______________________________________________

 Score = 91 (37.1 bits), Expect = 0.73, P = 0.52
 Identities = 59/222 (26%), Positives = 89/222 (40%)

Query:    82 LAAADGVMRWLE-EHRRGVAMDSGVVPI-VPGAVIFDLPVGGWNCRPTADFGYSACAAAG 139
             +AA+DG       + +R  ++D G +P  V  A ++    GG      AD   +A A  G
Sbjct:     1 MAASDGAPATTALDQKRNASVDFGALPPEVNSARMY----GGAGA---ADLLAAAAAWNG 53

Query:   140 VDVAVGTVGVGVGARAGAL--KGGVGTASATLQSGVTVGVLAVV-NAAGNVVDPATGLPW 196
             + V V T    VG+    L  +  +G AS ++ + V   ++ +   A  + +  A  +  
Sbjct:    54 IAVEVSTAASSVGSVITRLSTEHWMGPASLSMAAAVQPYLVWLTCTAESSALAAAQAMAS 113

Query:   197 MADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPA----ACRRI 252
              A     FAL  PPAE +A  A L+  L A N        + A +A         A    
Sbjct:   114 AAAFETAFALTVPPAEVVANRALLAE-LTATNILGQNVSAIAATEARYGEMWAQDASAMY 172

Query:   253 AIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPA 294
               AA   +A  + P   P        LA  A AV  +AG  A
Sbjct:   173 GYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVG-QAGASA 213

 Score = 81 (33.6 bits), Expect = 9.4, P = 1.0
 Identities = 53/192 (27%), Positives = 73/192 (38%)

Query:   131 GYSACAA-AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAA----G 185
             G SA A   G+   +  V   V + A  +     T    ++  + + V   V +A    G
Sbjct:   210 GASAFARQVGLSHLISDVADAVLSFASPVMSAADTGLEAVRQFLNLDVPLFVESAFHGLG 269

Query:   186 NVVDPATG----LPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD 241
              V D AT     +  +AD +G     AP     AA+A   +P G   T     +G  +  
Sbjct:   270 GVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVGGTALTADLGNASVV 329

Query:   242 AALS-PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPET 300
               LS PA+    A A   G A         LDG       TG  AVP E G  A + P  
Sbjct:   330 GRLSVPASWSTAAPATAAGAA---------LDG-------TGW-AVPEEDGPIAVMPPAP 372

Query:   301 QLVTAVGAAAAD 312
              +V A  +  AD
Sbjct:   373 GMVVAANSVGAD 384


^ = sptrembl|Q9BIU2|Q9BIU2 Fibroin 1 (Fragment).//:trembl|AF350271|AF350271_1
            product: "fibroin 1";  Euagrus chisoseus fibroin 1 mRNA, partial
            cds. //:gp|AF350271|13561994 fibroin 1 [Euagrus chisoseus]
            Length = 734

                        0        150       300       450       600         
                        |          |         |         |         |         |734
sptrembl|Q9BIU2|Q9BIU  | __________________________________________________
Local hits (HSPs)      |          _________________________

 Score = 94 (38.1 bits), Expect = 0.76, P = 0.53
 Identities = 58/216 (26%), Positives = 87/216 (40%)

Query:   131 GYSACAAAGVD-VAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
             G S  A+AG   VA    GVGVGA A A    +  A A++ +    G+L+V +AA     
Sbjct:   130 GLSYLASAGASAVASAVAGVGVGAGAYAYAYAIANAFASILANT--GLLSVSSAASVASS 187

Query:   190 PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAAC 249
              A+ +   A  V   +  A  +   AA A  S+   A +   + +    A  +A + AA 
Sbjct:   188 VASAI---ATSVSSSSAAAAASASAAAAASASAASSA-SASSSASAAAAAGASAAAGAAS 243

Query:   250 RRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVG-A 308
                A AA    +     A   L G + F    G++      G+  A +     + ++G  
Sbjct:   244 SASASAAASAFSSAFISA---LLGFSQFNSVFGSIT-SASLGLGIAANAVQSGLASLGLG 299

Query:   309 AAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
             AAA   A AV    LN    +G   Y      A G+
Sbjct:   300 AAASAAASAVANAGLNG---SGAYAYATAIASAIGN 332

 Score = 85 (35.0 bits), Expect = 7.3, P = 1.0
 Identities = 55/217 (25%), Positives = 78/217 (35%)

Query:   131 GYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSG-VTVGVLAVVNAAGNVVD 189
             G +A AAA      G  G G  A A A+   +G  +A L +G +T G  + +  A +V  
Sbjct:   299 GAAASAAASAVANAGLNGSGAYAYATAIASAIG--NALLGAGFLTAGNASQI--AASVAS 354

Query:   190 PATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAAC 249
                     A      +  A  A   A  A  SS     +T  +      A  AA +  A 
Sbjct:   355 AVASSASAAAAAASSSAAAAGASSAAGAASSSSTTTTTSTSSSAAAAAAAAAAASASGAS 414

Query:   250 RRIAIAAHDGLARTIRPAHT-PLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGA 308
                A A+    A     A    L G  VF    G++     A   A+ + +  L + +G 
Sbjct:   415 SASAAASASAAASAFSSALIGDLLGIGVFGNTFGSIGSASAASSIASAAAQAAL-SGLGL 473

Query:   309 A-AADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
             +  A   A AV + V      AG   Y      AF S
Sbjct:   474 SYLASAGASAVASAVAGVGVGAGAYAYAYAIANAFAS 510


^ = pironly|JQ0138|JQ0138 hypothetical 18.2K protein - Pseudomonas aeruginosa
            Length = 202

                        0        40        80       120       160       200
                        |         |         |         |         |         |202
pironly|JQ0138|JQ0138  | __________________________________________________
Local hits (HSPs)      |                       _______________________

 Score = 86 (35.3 bits), Expect = 0.78, P = 0.54
 Identities = 32/96 (33%), Positives = 41/96 (42%)

Query:   131 GYSACAAAGVDVAVGTVGVGVGARAGALKG-GVGTASATLQSGVTVGVLAVVNAA--GNV 187
             G++A  AAG   AV   G   G  AG   G   G A+A   +G+  G  A + AA    V
Sbjct:    92 GFAAGLAAGFAAAVFAAGFAAGFAAGFAAGLAAGFAAAVFAAGLAAGFAAGLAAAFAATV 151

Query:   188 VDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSP 223
                     + A LV  FALR   A   A+   L +P
Sbjct:   152 FTAGLAAAFAAGLVAGFALRLSRALPAASFT-LPTP 186


^ = sptrembl|Q9KYH3|Q9KYH3 Putative small secreted
            protein.//:trembl|AL939113|SCO939113_174 gene: "SCO2699";
            "SCC61A.20"; product: "putative small membrane protein";
            Streptomyces coelicolor A3(2) complete genome; segment 10/29
            //:gp|AL939113|8052408 putative small membrane protein
            [Streptomyces coelicolor A3(2)]
            Length = 90

                        0          20         40         60         80     
                        |           |          |          |          |     |90
sptrembl|Q9KYH3|Q9KYH  | __________________________________________________
Local hits (HSPs)      |    ________________________________

 Score = 68 (29.0 bits), Expect = 0.82, P = 0.56
 Identities = 22/57 (38%), Positives = 27/57 (47%)

Query:   137 AAGVDVAVGTV---GVGVG-ARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
             AAGV +  G V   G G+  A AGA    VG+      + V V V   VN  GN +D
Sbjct:     7 AAGVALGTGAVVLSGTGMAMADAGAAGAAVGSPGVLSGNVVQVPVHVPVNLCGNTID 63


^ = sptrembl|Q829C4|Q829C4 Hypothetical protein.//:trembl|AP005046|AP005046_246
            product: "hypothetical protein";  Streptomyces avermitilis genomic
            DNA, complete genome, section 26/30. //:gp|AP005046|29610150
            hypothetical protein [Streptomyces avermitilis MA-4680]
            Length = 463

                        0        100        200        300        400      
                        |          |          |          |          |      |463
sptrembl|Q829C4|Q829C  | __________________________________________________
Local hits (HSPs)      | _________________________________________

 Score = 91 (37.1 bits), Expect = 0.90, P = 0.59
 Identities = 54/196 (27%), Positives = 75/196 (38%)

Query:   133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL------AVVNAAGN 186
             SA +AAG  V   T     GARAG     +  A+A + +GVT  V+      AVV AA  
Sbjct:     5 SATSAAGTVV---TAAATAGARAGTTTA-LAPATAVVTAGVTTAVMVTGAEIAVVTAAET 60

Query:   187 VVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACD---AA 243
              V  A  +  M  +VG  A   P A        ++    A  T   T +  +A     AA
Sbjct:    61 GVVSAVTIAAMT-VVGMTAAADPAASGAGTTGAMTGVTTAVATVAETVVASVATTTVVAA 119

Query:   244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
              S        + A    A T  P    + G  +  +AT A+         A L       
Sbjct:   120 ASAEGTTATVVDARRSAATTAPPDRAAMTG-VLDRVATTALL--DRVATTALLDRAATTA 176

Query:   304 TAVGAAAADCLA-RAV 318
             T +  +AA  +A R+V
Sbjct:   177 TVIVGSAATVIAPRSV 192

 Score = 86 (35.3 bits), Expect = 3.2, P = 0.96
 Identities = 44/194 (22%), Positives = 73/194 (37%)

Query:   136 AAAGVDVAVGTVGVGVGARAGALKGGVGTASAT-LQSGVTVGVLAVVNAAGNVV-DPA-T 192
             AA    V VG+    +  R+ A+   V + + T + + V    +A+      V  DPA +
Sbjct:   172 AATTATVIVGSAATVIAPRSVAMTTVVASVAMTDVMATVAASPVAMTVVGMTVAADPAAS 231

Query:   193 GLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRI 252
             G      + G     A  AE + A    ++ + A  T  +     +    A++  A   +
Sbjct:   232 GAGTTGAMTGVTTAVATEAETVVASVATTTVVVATGTVDSVATVTVRPSVAMTTVAASAV 291

Query:   253 AIAAHDGLARTIRPAHTPLDG-DTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAA 311
              I     +A  I  A   + G  TV A    +VA+     V   +       TAV  A  
Sbjct:   292 TIVVATTVA--IVAASAAMTGVTTVAATVVASVAMTAVTTVAETVVASVATTTAVAIAVV 349

Query:   312 DCLARAVLAGVLNA 325
               +   V+ GV+ A
Sbjct:   350 TVVGSVVMTGVMTA 363

 Score = 85 (35.0 bits), Expect = 4.1, P = 0.98
 Identities = 53/199 (26%), Positives = 80/199 (40%)

Query:   138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA-----VVNAAGNVVDPAT 192
             A   VA+  VG+ V A   A   G GT  A   +GVT  V       V + A   V  AT
Sbjct:   211 AASPVAMTVVGMTVAADPAA--SGAGTTGA--MTGVTTAVATEAETVVASVATTTVVVAT 266

Query:   193 GLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRI 252
             G     D V    +R  P+  +  +A       A      TT+ ++A  AA++       
Sbjct:   267 GT---VDSVATVTVR--PSVAMTTVAA-----SAVTIVVATTVAIVAASAAMTGVTTVAA 316

Query:   253 AIAAHDGLARTIRPAHTPLDGDTVFALATG-AVAVPPEAGVPAALSPETQLVTAVGAAAA 311
              + A   +A T   A T +    V ++AT  AVA+     V + +   T ++TA    A 
Sbjct:   317 TVVA--SVAMT---AVTTVAETVVASVATTTAVAIAVVTVVGSVVM--TGVMTAAATVAE 369

Query:   312 DCLARAVLAGVLNAQPVAG 330
               +   V+ GV+    + G
Sbjct:   370 TVVGSGVMTGVMTVAAIVG 388

 Score = 85 (35.0 bits), Expect = 4.1, P = 0.98
 Identities = 59/208 (28%), Positives = 83/208 (39%)

Query:   143 AVGTVGVGVGARAGALKGGVGTASAT-LQSGVTVGVLAVVNAAGNVVDPA-TGLPWMADL 200
             AV T GV         +  V TA+ T + S VT+  + VV       DPA +G      +
Sbjct:    35 AVVTAGVTTAVMVTGAEIAVVTAAETGVVSAVTIAAMTVVGMTA-AADPAASGAGTTGAM 93

Query:   201 VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRIAIAAH-DG 259
              G     A  AE + A    ++ + A +    T   V A  +A + A   R A+    D 
Sbjct:    94 TGVTTAVATVAETVVASVATTTVVAAASAEGTTATVVDARRSAATTAPPDRAAMTGVLDR 153

Query:   260 LARTI---RPAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGAAAADCLAR 316
             +A T    R A T L  D   A  T  V V   A V   ++P +  +T V A+ A     
Sbjct:   154 VATTALLDRVATTALL-DR--AATTATVIVGSAATV---IAPRSVAMTTVVASVAMTDVM 207

Query:   317 AVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
             A +A    A  V G+    D  P A G+
Sbjct:   208 ATVAASPVAMTVVGMTVAAD--PAASGA 233


^ = sptrembl|O18504|O18504 Melanogenic peroxidase.//:trembl|Y11592|SOPEROXID_1
            product: "melanogenic peroxidase";  S.officinalis mRNA for
            peroxidase //:gp|Y11592|2239176 melanogenic peroxidase [Sepia
            officinalis]
            Length = 926

                        0        190        380       570       760        
                        |          |          |         |         |        |926
sptrembl|O18504|O1850  | __________________________________________________
Local hits (HSPs)      |     _____________

 Score = 94 (38.1 bits), Expect = 1.0, P = 0.63
 Identities = 59/197 (29%), Positives = 71/197 (36%)

Query:   138 AGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGLPWM 197
             AGV  A GT G    A    L    GT  AT  + V     A    AGN    A      
Sbjct:    69 AGVAGAAGTAGAADAAGPLELLELDGTVDATGIAAVVGAARAAAGVAGNAAAAAAAAARA 128

Query:   198 ADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIAC------DAALSPAACRR 251
             A    + A+ A  A   AA A +++   A           IA       +A  +  A   
Sbjct:   129 AGAT-DTAVAAAAAAANAAAAAVAAGADAATIAEAAAAAAIAAAAEADIEAVTNATAAAV 187

Query:   252 IAIAAHDGLARTIRPAHTPLDGDTVFALATGA--VAVPPEAGVPAALSPETQLVTAVGAA 309
             IA  A    A  I           V A   GA  +A+   A V AA + ET +VTA  A 
Sbjct:   188 IAADARGADADVIAQVVAAAAAAAVNASTAGADDLAIAEAAAVAAAAAIETAIVTA-NAT 246

Query:   310 AADCLARAVLAGVL-NA 325
             AA  L  A  A  L NA
Sbjct:   247 AAAALVNAEAAETLVNA 263

 Score = 88 (36.0 bits), Expect = 4.5, P = 0.99
 Identities = 74/267 (27%), Positives = 99/267 (37%)

Query:    75 AGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGYSA 134
             A G+A G A A G +  LE    G    +G+  +V GA      V G N    A    +A
Sbjct:    74 AAGTA-GAADAAGPLELLELD--GTVDATGIAAVV-GAARAAAGVAG-NAAAAA--AAAA 126

Query:   135 CAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNVVDPATGL 194
              AA   D AV        A A A+  G   A+   ++     + A   A    V  AT  
Sbjct:   127 RAAGATDTAVAAAAAAANAAAAAVAAGADAATIA-EAAAAAAIAAAAEADIEAVTNATAA 185

Query:   195 PWMA-DLVGEFA-LRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACRRI 252
               +A D  G  A + A      AA A  +S  GA +        V A  AA+  A     
Sbjct:   186 AVIAADARGADADVIAQVVAAAAAAAVNASTAGADDLAIAEAAAVAAA-AAIETAIVTAN 244

Query:   253 AIAAHDGLARTIRPAHTPLDGDTVFALATGAV-AVPP---EAGVPAALSPETQLVTAVGA 308
             A AA   L      A T ++ D + A  TG + A  P   +  +   L     LVTA+  
Sbjct:   245 ATAAA-ALVNA-EAAETLVNADLIIA-QTGLIFAETPRLIQDMLNQGLIDAENLVTAI-Q 300

Query:   309 AAADCLARAVLAGVLNAQPVAGIPTYR 335
                + +A    A  L     A  P YR
Sbjct:   301 PPLELIAECPFAAALTCD--AASP-YR 324


^ = sptrembl|Q8K6B1|Q8K6B1 Putative tail protein-phage associated (Hypothetical
            protein).//:trembl|AE014163|AE014163_40 gene: "SpyM3_1421";
            product: "putative tail protein-phage associated";  Streptococcus
            pyogenes MGAS315, section 28 of 37 of the complete genome.
            //:trembl|AP005142|AP005142_162 gene: "SPs0444"; product:
            "hypothetical protein (phage associated)";  Streptococcus pyogenes
            SSI-1 DNA, complete genome, section 2/6. //:gp|AE014163|21905164
            putative tail protein - phage associated [Streptococcus pyogenes
            phage 315.6] [Streptococcus pyogenes
            MGAS315]//:gp|AP005142|28810602 hypothetical protein (phage
            associated) [Streptococcus pyogenes SSI-1]
            Length = 1460

                        0        300        600       900      1200        
                        |          |          |         |         |        |1460
sptrembl|Q8K6B1|Q8K6B  | __________________________________________________
Local hits (HSPs)      |                        ______

 Score = 96 (38.9 bits), Expect = 1.0, P = 0.63
 Identities = 58/205 (28%), Positives = 89/205 (43%)

Query:   140 VDVAVGTVGVGVGARAGALKGGVGTAS-------ATLQSGVTVGVLAVVNAAG-NVVDPA 191
             V +A+G++G  VGA  G +  G+ +AS       ATL SG+  GV A     G +V+   
Sbjct:   645 VGLALGSLGTSVGAFGGIISSGIASASGVVGAFAATL-SGLP-GVFATAAGRGLSVLGTM 702

Query:   192 TGLPWMADLVGEFALRA-PPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSPAACR 250
             T    M+ LV   AL A  PA   A L  + + LG  N+ F   I     +  L+ A  +
Sbjct:   703 TSA--MSSLVS-LALAAIGPA---AILGLVVAGLGLINSQFGAQI-----EQLLNTAVTK 751

Query:   251 RIAIAAHDGLARTIRPAHTPL--DGDTVFALATGAVAVPPEAGVPAALSPETQLVTAVGA 308
                I    GL + I      L   G  + A    A+AV     + A +   T LV  +G 
Sbjct:   752 GPGII--QGLVKGITSKIPVLIASGTQLIAKFANAIAVLLPVIIQAGVQLITSLVQGIGQ 809

Query:   309 AAADCLARAV-LAGVLNAQPVAGIP 332
              A + ++ A+ + G   +   + +P
Sbjct:   810 NATNLISSAIKIIGSFVSSIASALP 834


^ = sptrembl|Q8UDK8|Q8UDK8 Lytic murein
            transglycosylase.//:trembl|AE008128|AE008128_1 gene: "AGR_C_3839";
            product: "AGR_C_3839p";  Agrobacterium tumefaciens str. C58
            circular chromosome, section 186 of 254 of the complete sequence.
            //:trembl|AE009162|AE009162_1 gene: "Atu2117"; product: "lytic
            murein transglycosylase";  Agrobacterium tumefaciens strain C58
            circular chromosome, section 188 of 256 of the complete sequence.
            //:pironly|AE2836|AE2836 lytic murein transglycosylase Atu2117
            [imported] - Agrobacterium tumefaciens (st//:pironly|H97613|H97613
            hypothetical protein AGR_C_3839 [imported] - Agrobacterium
            tumefaciens (strain C//:gp|AE008128|15157253 AGR_C_3839p
            [Agrobacterium tumefaciens str. C58
            (Cereon)]//:gp|AE009162|17740579 lytic murein transglycosylase
            [Agrobacterium tumefaciens str. C58 (U. Washington)]
            Length = 358

                        0          80        160        240        320     
                        |           |          |          |          |     |358
sptrembl|Q8UDK8|Q8UDK  | __________________________________________________
Local hits (HSPs)      |     ___________________________

 Score = 89 (36.4 bits), Expect = 1.0, P = 0.64
 Identities = 56/202 (27%), Positives = 69/202 (34%)

Query:   133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQS--GVTVGVLAVVNAAGNVVDP 190
             SAC +       G  G  +            T  AT ++  G T    AV  A       
Sbjct:    26 SACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPATAEAVAGATPAAPAVQTADAAASSQ 85

Query:   191 ATGLPW-MADLVGEFALRAPPAEQIAALA----QLSSPLGAFNTPFNTTIGVIACDAALS 245
             A  LP  +A   G  AL  PPA +IAA A    Q+  P         T     A  AAL 
Sbjct:    86 AAALPTAVAVKGGRVAL--PPASEIAAAAAIATQMQQPTEVAGAAATTAAPTTA--AALV 141

Query:   246 PAACRRIAIAAHDGLARTIRPA-HTP-LDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
             P      A A     A   +PA H   +D   V A+     A PP  G P+  +  T   
Sbjct:   142 PTHTTPAAAAIETANAAA-KPAMHNAAVDLPQVAAVKGSFPAAPPPPGSPSIGTELTAER 200

Query:   304 TAVGAAAADCLARAVLAGVLNA 325
               +     D    A  AG  NA
Sbjct:   201 KVIPLPKPDSTVLAYAAGPTNA 222


^ = sptrembl|Q98BA1|Q98BA1 Hypothetical protein
            mll5666.//:trembl|AP003007|AP003007_73 gene: "mll5666";
            Mesorhizobium loti DNA, complete genome, section 14/21.
            //:gp|AP003007|14025471 unknown protein [Mesorhizobium loti]
            Length = 229

                        0         50        100        150        200      
                        |          |          |          |          |      |229
sptrembl|Q98BA1|Q98BA  | __________________________________________________
Local hits (HSPs)      |                _______________

 Score = 86 (35.3 bits), Expect = 1.0, P = 0.64
 Identities = 29/76 (38%), Positives = 40/76 (52%)

Query:   120 GGWNCRPTADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
             GG N    A+ G S   +AG+  +VG    G+ A AGA  GG G  +A L  G +VG  +
Sbjct:    70 GGINAGAGANIGGSNGVSAGLGASVGDSS-GINAGAGANVGGSGVITARL--GASVGDRS 126

Query:   180 VVNA-AGNVVDPATGL 194
              +NA AG  V  + G+
Sbjct:   127 GINAGAGANVGGSGGI 142


^ = sptrembl|Q8NBI4|Q8NBI4 Hypothetical protein
            NT2RP3003474.//:trembl|AK075554|AK075554_1 unnamed ORF;  Homo
            sapiens cDNA PSEC0254 fis, clone NT2RP3003474, moderately similar
            to ELASTIN PRECURSOR. //:gp|AK075554|22761779 unnamed protein
            product [Homo sapiens]
            Length = 643

                        0        130       260       390       520         
                        |          |         |         |         |         |643
sptrembl|Q8NBI4|Q8NBI  | __________________________________________________
Local hits (HSPs)      |                  ____________________________

 Score = 92 (37.4 bits), Expect = 1.1, P = 0.66
 Identities = 92/338 (27%), Positives = 118/338 (34%)

Query:     9 GIRVGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRE-TDLLDPANSVR 67
             G  VG        A   A +  G   VLP  G  G     G  PG      +  PA +  
Sbjct:   211 GTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAA 270

Query:    68 FVDALLLAG-GSAYGLAAAD-----GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
                A   A  G+A GL         GV+        GV +    +P+VPGA I    V G
Sbjct:   271 AAAAAKAAKYGAAAGLVPGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPG 330

Query:   122 WNCRPTADFGYSACAAAGVDVAVGTVGVGV-GARAGALKG-GVGT-ASATLQSGVTVGVL 178
                   A    +  A  G    VG  G+   G  AG   G GVG  A A   +       
Sbjct:   331 VVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGAEAQAAAAAKAAKY 390

Query:   179 AVVNAAGNVVDPATGL-PWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGV 237
              +V   G  V P  G+ P +    G   +   P   +A    ++  +G    P     GV
Sbjct:   391 GLVPGVG--VAPGVGVAPGVGVAPG---VGLAPGVGVAPGVGVAPGVGV--APGIGPGGV 443

Query:   238 IAC-DAALSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAAL 296
              A   +A   AA  ++  AA  GL   I     P  G  V     G  A  P  GV A +
Sbjct:   444 AAAAKSAAKVAAKAQLRAAA--GLGAGI-----PGLGVGVGVPGLGVGAGVPGLGVGAGV 496

Query:   297 SPETQLVTAVGAAAADCLARAV--LAGVLNAQPVAGIP 332
                  +  A+ AA A     AV  + G L A    GIP
Sbjct:   497 PGFGAVPGALAAAKAANYGAAVPGVLGGLGALGGVGIP 534

 Score = 86 (35.3 bits), Expect = 4.9, P = 0.99
 Identities = 87/348 (25%), Positives = 123/348 (35%)

Query:     3 SITDVGGIR-VGHYQRLDPDASLGAGWACGVTVVLPPPGTVGAVDCRGGAPGTRETDLLD 61
             +I  +GGI  VG        A+       G    L P G  G      G PG     +  
Sbjct:   252 AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGP-GFGPGVVGVPGAGVPGVGV 310

Query:    62 PANSVRFVDALLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGG 121
             P   +  V    + G +  G+ + +   +   +  +  A   GV   V G   + +  GG
Sbjct:   311 PGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARP-GVG--VGGIPTYGVGAGG 367

Query:   122 WNCRPTADFGYSACAAAGVDVA-VGTV-GVGVGARAGALKGGVGTASATLQSGVTVGVLA 179
             +        G  A AAA    A  G V GVGV    G   G VG A      G+  GV  
Sbjct:   368 FPGFGVG-VGAEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG-VGVAPGV---GLAPGV-G 421

Query:   180 VVNAAGNVVDPATGL-PWMADLVGEFALRAPPAEQIAALAQL--SSPLGAFNTPFNTTIG 236
             V    G  V P  G+ P +    G  A  A  A ++AA AQL  ++ LGA        +G
Sbjct:   422 VAPGVG--VAPGVGVAPGIGP--GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVG 477

Query:   237 VIACDAALS-PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGAVAVPPEAGVPAA 295
             V         P       +     +   +  A     G  V  +  G  A+    G+P  
Sbjct:   478 VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAANYGAAVPGVLGGLGALGG-VGIPGG 536

Query:   296 LSPETQLVTAVGAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFG 343
             +        A  AAAA   A+A   G++ A  + G+       PG  G
Sbjct:   537 V---VGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGLGVPGVGG 581


^ = sptrembl|Q9NI17|Q9NI17 Merozoite surface protein 2
            (Fragment).//:trembl|AF217026|AF217026_1 gene: "MSP2"; product:
            "merozoite surface protein 2";  Plasmodium falciparum isolate
            62-62A2 merozoite surface protein 2 (MSP2) gene, partial cds.
            //:gp|AF217026|7576841 merozoite surface protein 2 [Plasmodium
            falciparum]
            Length = 110

                        0            30            60           90         
                        |             |             |            |         |110
sptrembl|Q9NI17|Q9NI1  | __________________________________________________
Local hits (HSPs)      |        ______________________________________

 Score = 75 (31.5 bits), Expect = 1.2, P = 0.68
 Identities = 30/86 (34%), Positives = 36/86 (41%)

Query:   131 GYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVL--AVVNAA---G 185
             G S  A AG   A G  G G GA A    G  G A A+ ++G + G    AV +A    G
Sbjct:    14 GASGRAGAGAG-ASGRAGAGAGAGASGRAGASGRAGASGRAGASAGSGDGAVASAGSGDG 72

Query:   186 NVVDPATGLPWMADLVGEFALRAPPA 211
              V     G    AD  G  +  A PA
Sbjct:    73 AVASAGNGANPGADAEGSSSTPATPA 98


^ = sptrembl|Q826P5|Q826P5 Putative reductase.//:trembl|AP005049|AP005049_97
            product: "putative reductase";  Streptomyces avermitilis genomic
            DNA, complete genome, section 29/30. //:gp|AP005049|29610803
            putative reductase [Streptomyces avermitilis MA-4680]
            Length = 329

                        0         70        140        210       280       
                        |          |          |          |         |       |329
sptrembl|Q826P5|Q826P  | __________________________________________________
Local hits (HSPs)      |   ___________________

 Score = 88 (36.0 bits), Expect = 1.2, P = 0.69
 Identities = 44/142 (30%), Positives = 63/142 (44%)

Query:    72 LLLAGGSAYGLAAADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFD-LPVGGWNCRPTADF 130
             +++ GG A GL+AA  + R     R  + +D+G     P A +   L   G    P A+F
Sbjct:    12 VVVVGGGAAGLSAALVLGR---ARRHTLVVDAGEPRNAPAAHLQGFLTRDGM---PPAEF 65

Query:   131 ---GYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLAVVNAAGNV 187
                G       GV++  G V V V      ++GGVG    TL  G TV    +V A G +
Sbjct:    66 LAEGRREIGRYGVELVQGRV-VDV------VRGGVGAFEVTLAGGRTVHARRLVLATG-L 117

Query:   188 VDPATGLPWMADLVGEFALRAP 209
             VD    +P +A+  G   L  P
Sbjct:   118 VDELPPVPGVAERFGRDVLHCP 139


^ = sptrembl|Q8VKM5|Q8VKM5 Hypothetical protein
            MT0356.//:trembl|AE006941|AE006941_9 gene: "MT0356"; product:
            "hypothetical protein";  Mycobacterium tuberculosis CDC1551,
            section 27 of 280 of the complete genome. //:gp|AE006941|13879852
            hypothetical protein [Mycobacterium tuberculosis CDC1551]
            Length = 481

                        0        100        200       300       400        
                        |          |          |         |         |        |481
sptrembl|Q8VKM5|Q8VKM  | __________________________________________________
Local hits (HSPs)      |                _____________________

 Score = 90 (36.7 bits), Expect = 1.2, P = 0.71
 Identities = 55/213 (25%), Positives = 80/213 (37%)

Query:   131 GYSACAAAGVDVAVGT---VGVGVGARAG-ALKGGVGTASATLQSGVTVGVLAVVNAAGN 186
             G++A   A V   VG    +G G+GA+AG    GGVG        GV  G  A    AG 
Sbjct:   141 GFTAVIEAEVGAQVGAGLGIGTGLGAQAGMGFGGGVGLGLGGQAGGVIGGSAAGAIGAG- 199

Query:   187 VVDPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALSP 246
              V    G      + G+ A+ A     +   A ++S +G         +G ++    +S 
Sbjct:   200 -VGGRVGGNGQIGVAGQGAVGAGVGAGVGGQAGIASQIGVSAGGGLGGVGNVSGLTGVSS 258

Query:   247 AACRRIAIAAHDGLART----IRPAHTP-LDGDTVFALATGAVAVPPEAGVP-AALSPET 300
              AC     +   GL  +    +  A  P L G        G       AG+   A+   T
Sbjct:   259 NACXASNASGQAGLIASEGAALNGAAMPHLSGPLAGVGVGGQAGAAGGAGLGFGAVGHPT 318

Query:   301 QLVTAVGAAA--ADCLARAVLAGVLNAQPVAGI 331
                 A+GAA   A   A A + G +     AG+
Sbjct:   319 PQPAALGAAGVVAKTEAAAGVVGGVGGATAAGV 351


^ = sptrembl|Q23057|Q23057 Hypothetical protein.//:trembl|U64609|CEUT28H11_1
            gene: "ssq-2"; product: "Sperm-specific family, class q protein 2";
            Caenorhabditis elegans cosmid T28H11, complete sequence.
            //:pironly|T29167|T29167 hypothetical protein T28H11.5 -
            Caenorhabditis elegans//:gp|U64609|1439681 Sperm-specific family,
            class q protein 2 [Caenorhabditis elegans]
            Length = 405

                        0          90        180        270        360     
                        |           |          |          |          |     |405
sptrembl|Q23057|Q2305  | __________________________________________________
Local hits (HSPs)      | _________________________________

 Score = 89 (36.4 bits), Expect = 1.2, P = 0.71
 Identities = 66/271 (24%), Positives = 91/271 (33%)

Query:    74 LAGGSAYGLAAAD-GVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPTADFGY 132
             +AGGS  G  +A  GV         G +   G     PG  ++ +  GG      A   Y
Sbjct:     8 VAGGSNTGAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVY-MGAGGGGGGGGAQSAY 66

Query:   133 SACAAAGVDVAVGTVGVGVGARAGALKGGVGTASAT--LQSGVTVGVLAVVNA--AGNVV 188
              A   A V  A   V +G    AG   GG  T +A     SG +  + AV  A    + +
Sbjct:    67 FAVGGAPVGGAPAAVSIGAPPPAGG--GGASTMTALGGAPSGAST-MTAVGGAPRGASTM 123

Query:   189 DPATGLPWMADL---VGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAALS 245
                 G+P  A     VG     A     +      +SP+ AF         + A   A +
Sbjct:   124 TAVGGVPSGASTMTAVGGAPTGASTMTAVGGAPTGASPMTAFGGAPTGASTMTAVGGAPT 183

Query:   246 PAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALA---TGAVAVPPEAGVPAALSPETQL 302
              A+       A  G +        P    T+ A+    TGA  +    GVP   S  T +
Sbjct:   184 GASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGAPTGASTMTAVGGVPTGASTMTAI 243

Query:   303 VTAVGAAAADCLARAVLAGVLNAQPVAGIPT 333
               A   A+          G      V G PT
Sbjct:   244 GGAPSGASTMTAVGGAPRGASTMTAVGGAPT 274


^ = sptrembl|Q7X7Z3|Q7X7Z3 OSJNBa0079A21.5 protein (OSJNBb0038F03.19
            protein).//:sptremblnew|CAD41459|CAD41459 OSJNBa0079A21.3
            protein.//:sptremblnew|CAE04352|CAE04352 OSJNBb0038F03.16
            protein.//:trembl|AL606728|OSJN00102_16 gene: "OSJNBb0038F03.16";
            Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03.
            //:trembl|AL607006|OSJN00126_3 gene: "OSJNBa0079A21.3";  Oryza
            sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21.
            //:gp|AL606728|38345958 OSJNBb0038F03.16 [Oryza sativa (japonica
            cultivar-group)]//:gp|AL607006|38346156 OSJNBa0079A21.3 [Oryza
            sativa (japonica cultivar-group)]
            Length = 293

                        0         60       120       180       240         
                        |          |         |         |         |         |293
sptrembl|Q7X7Z3|Q7X7Z  | __________________________________________________
Local hits (HSPs)      |          _______________________________

 Score = 87 (35.7 bits), Expect = 1.3, P = 0.72
 Identities = 63/203 (31%), Positives = 77/203 (37%)

Query:   128 ADFGYSACAAAG-VDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVG-VLAVVNAAG 185
             A  G +  A AG      G  G G GA+ G   G   T +A+  +G  VG  +A  +AAG
Sbjct:    47 AGVGATIGAGAGDTGAGAGDTGAGAGAKVGVATGA-RTGAASSGAGADVGGAVAGGSAAG 105

Query:   186 NVV--DPATGLPWMADLVGEFALRAPPAEQIAALAQLSSPLGAFNTPFNTTIGVIACDAA 243
              V     ATG    A  VG  A       ++ A  +      A       + G  A  A 
Sbjct:   106 GVARGGEATG----AATVGGVARGGAATAKVGA--ETGGEEVAVGGDAAASCGAAA--AV 157

Query:   244 LSPAACRRI-AIAAHDGLARTIRPAHTPLDG---DTVFALATGAVAVPPEAGVPAALSPE 299
             +  AA     A AA  G A   R A   L G   +T  A A    A     G  AAL   
Sbjct:   158 VGGAAAETCGAEAALGGAAAETRGAEAALVGAAAETFGAWAALVGAAAETCGAEAAL--- 214

Query:   300 TQLVTAVGAAAAD-CLARAVLAG 321
                   VGAAA D C A A + G
Sbjct:   215 ------VGAAADDTCGAEAAVVG 231


^ = swiss|P40119|CBYC_ALCEU CbbY protein,
            chromosomal.//:trembl|M64173|AEMCFXXYE_2 gene: "cfxYc";
            Alcaligenes eutrophus chromosomal carbon dioxide fixation operon
            D-ribuslose-5-phosphate 3-epimerase (cfxEc), cfxXc, and cfxYc
            genes, complete cds. //:gp|M64173|304018 cfxYc [Ralstonia eutropha]
            Length = 254

                        0        50       100       150       200       250
                        |         |         |         |         |         |254
swiss|P40119|CBYC_ALC  | __________________________________________________
Local hits (HSPs)      |                    _____________________

 Score = 86 (35.3 bits), Expect = 1.3, P = 0.72
 Identities = 36/110 (32%), Positives = 42/110 (38%)

Query:   244 LSPAACRRIAIAAHDGLARTIRPAHTPLDGDTVFALATGA-----VAVPPEAGVPAALSP 298
             L P   R I  A   GL   I    TP + D +     GA      A   +AG  A   P
Sbjct:    97 LRPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIKKP 156

Query:   299 ETQLVTAV----GAAAADCLARAVLAGVLNAQPVAGIPTYRDMFPGAFGS 344
                +  AV    G    DCLA    A  L A   AGIPT   + P AF +
Sbjct:   157 APDVYLAVLERLGLEGGDCLAIEDSANGLRAARAAGIPTV--VTPAAFSA 204


^ = sptrembl|Q9ZB96|Q9ZB96 Hypothetical protein.//:trembl|U17129|RS17129_6
            product: "unknown";  Rhodococcus erythropolis ThcA (thcA) gene,
            complete cds; and unknown genes. //:gp|U17129|3873404 unknown
            [Rhodococcus erythropolis]
            Length = 615

                        0        130        260        390       520       
                        |          |          |          |         |       |615
sptrembl|Q9ZB96|Q9ZB9  | __________________________________________________
Local hits (HSPs)      |                          ____      _________

 Score = 87 (35.7 bits), Expect = 1.4, Sum P(2) = 0.74
 Identities = 40/123 (32%), Positives = 57/123 (46%)

Query:    70 DALLLAGGSAYGLAA--ADGVMRWLEEHRRGVAMDSGVVPIVPGAVIFDLPVGGWNCRPT 127
             + +++A GSA        D  +RWL+      A    +  + PG V    P+GG    P 
Sbjct:   429 ELVVVATGSAARPPTYPVDDSVRWLDASE---AFGK-LTTVGPGPVALIDPLGG----PI 480

Query:   128 ADFGYSACAAAGVDVAVGTVGVGVGARAGALKGGVGTASATLQSGVTVGVLA--VVNAAG 185
             A     A AA GV +++ T+   VG+R GA    VG  +   Q+GVT  VLA  V+  A 
Sbjct:   481 AVALAEALAAEGVSISIVTLDSIVGSRLGASGDLVGANTRIQQAGVT-RVLASRVIEIAS 539

Query:   186 NVV 188
               V
Sbjct:   540 GAV 542

 Score = 46 (21.3 bits), Expect = 1.4, Sum P(2) = 0.74
 Identities = 16/56 (28%), Positives = 22/56 (39%)

Query:    30 CGVTVVLPPPGTVGAVDCRGGAPGTRETDLLDPANSVRFVDALLLAGGSAYGLAAA 85
             C  T ++  P     V C G      ET   D    +    A+L+ GG   G+ AA
Sbjct:   303 CNQTCLVRDPRNP-VVTCVGNPSAGFETVDPDEREQISTPRAVLVVGGGPAGMEAA 357


^ = sptrembl|Q81QH5|Q81QH5 Hypothetical protein.//:trembl|AE017031|AE017031_253
            product: "conserved hypothetical protein";  Bacillus anthracis str.
            Ames section 8 of 18 of the complete genome.
            //:gp|AE017031|30257080 conserved hypothetical protein [Bacillus
            anthracis str. Ames]
            Length = 366

                        0         80        160        240        320      
                        |          |          |          |          |      |366
sptrembl|Q81QH5|Q81QH  | __________________________________________________
Local hits (HSPs)      |     _________________________________________

 Score = 88 (36.0 bits), Expect = 1.4, P = 0.75
 Identities = 88/327 (26%), Positives = 113/327 (34%)

Query:    20 PDASLGAGWACGVTVVLPPPGTVGAVDCRG--GAPG-TRETDLLDPANSVRFVDALLLAG 76
             P    GA  A G+T    P GT GA    G  G  G T  T +           A  + G
Sbjct:    32 PTGITGATGATGITGATGPTGTTGATGATGITGVTGATGITGVTGATGITGVTGATGITG 91

Query:    77 GSA-YGLAAADGVMRWLEEHRRGVAMDSGVV-PI-VPGAVIFDLPVGGWNCR-PTADFGY 132
              +   G+  A G          G A  +GV  P  + GA     P G      PT D G 
Sbjct:    92 VTGPTGITGATGPTGITGA--TGPAGITGVTGPTGITGATG---PTGTTGVTGPTGDTGL 146

Query:   133 SACAAAGVDVAVGTVGV-GVGARAGAL--KGGVGTASATLQSGVTVGVLAVVNAAGNVVD 189
             +   A G   A G  G  G     GA    G  G A AT  +G T G+     A G    
Sbjct:   147 AG--ATGPTGATGLAGATGPTGDTGATGPTGATGLAGATGPTGAT-GLTGATGATG---- 199

Query:   190 PATGLPWMADLVGEFALRAPPAEQI-AALAQLSSPLG-AFNTPFNTTIGVIACDAALSPA 247
              ATG       +  FA    PA  + A LA   + LG  F+ P     GV      + P 
Sbjct:   200 -ATG----GGAIIPFASGTTPALLVNAVLANTGTLLGFGFSQP-GIAPGV-GGTLTILPG 252

Query:   248 ACRRIA-IAAHDGLARTIR---PAHTPLDGDTVFALATGAVAVPPEAGVPAALSPETQLV 303
                  A +A  DG+  ++     A   L   T   +       P  +     ++P   L 
Sbjct:   253 VVGDYAFVAPRDGIITSLAGFFSATAALAPLTPVQIQMQIFIAPAASNTFTPVAPPLLLT 312

Query:   304 TAVGAAAADCLARAVLAGVLNAQPVAG 330
              A+ A A    A  + A   N   VAG
Sbjct:   313 PALPAIAIGTTATGIQA--YNVPVVAG 337


WARNING:  HSPs involving 77 database sequences were not reported due to the
          limiting value of parameter B = 100.


Parameters:
  matrix=BLOSUM62
  E=10
  V=250
  B=100
  hspmax=10
  filter=none
  echofilter
  stats
  qtype
  qres

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.137   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E    S W   T  X   E2     S2
   +0      0      344       344       10.  82 3  11 22  0.20    34
                                                    33  0.22    37


Statistics:
  Query          Expected         Observed           HSPs       HSPs
  Frame  MatID  High Score       High Score       Reportable  Reported
   +0      0    72 (33.2 bits)  1768 (814.4 bits)     251        154

  Query         Neighborhd  Word      Excluded    Failed   Successful  Overlaps
  Frame  MatID   Words      Hits        Hits    Extensions Extensions  Excluded
   +0      0      6697   206976632    46467993   160154107   354532      7193

  Database:  /dove2/data/db/nrdb95
    Title:  nrdb-95%
    Release date:  Rel. 13.Feb.2004
    Posted date:  10:04:49 AM MET Feb 13, 2004
    Last modified:  unknown
    First created:  unknown
    Format:  BLAST-1.4
  # of letters in database:  285,484,446
  # of sequences in database:  879,644
  # of database sequences satisfying E:  177
  No. of states in DFA:  563 (110 KB)
  Total size of DFA:  249 KB (256 KB)
  Time to generate neighborhood:  0.03u 0.00s 0.03t  Elapsed: 00:00:00
  No. of threads or processors used:  4
  Search cpu time:  297.86u 4.53s 302.39t  Elapsed: 00:01:18
  Total cpu time:  298.20u 4.65s 302.85t  Elapsed: 00:01:19
  Start:  Fri Feb 13 16:21:33 2004   End:  Fri Feb 13 16:22:52 2004

WARNINGS ISSUED:  1

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