METHOD about: | ../../../doc/explain_methods.html#PX_about_loopp |
METHOD url: | LOOPP |
TYPE : | fr |
NPROT : | 483 |
NWEEKS : | 184 |
NOTE 1 : | here ALL results obtained for LOOPP in month 2000_07 are given, i.e. NOT those for a common subset! |
NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
fr | 2000_07 | THIS_month:psum | 2.9 | 1.8 | 35.2 | 10.6 | 11.4 | 14.8 | 90.7 | 4.8 | 19.1 | 23.0 | 196.8 |
fr | 2000_07 | 1c01:A | 0.8 | 0.7 | -1.053102e+01 | -8.035945e+00 | 0.0e+00 | 3.9e+00 | 7.6e+01 | 4.4 | 1.8e+01 | 2.6e+01 | 76 |
fr | 2000_07 | 1c55:A | 4.7 | 3.7 | 2.256043e+01 | 1.727434e+01 | 8.0e+01 | 8.2e+01 | 8.2e+01 | 5.6 | 7.8e+01 | 8.0e+01 | 40 |
fr | 2000_07 | 1c8u:A | 1.1 | 2.3 | -2.051737e+00 | -1.354671e+00 | 0.0e+00 | 1.1e+00 | 9.4e+01 | 6.7 | 1.5e+01 | 1.8e+01 | 285 |
fr | 2000_07 | 1dow:B | 0.7 | 0 | -2.036000e+01 | -1.970323e+01 | 1.6e+01 | 3.5e+01 | 9.7e+01 | 3.6 | 0.0e+00 | 0.0e+00 | 31 |
fr | 2000_07 | 1dp4:C | 1.6 | 2.8 | -4.323663e-02 | 1.177985e+00 | 9.3e-01 | 2.8e+00 | 9.6e+01 | 4.0 | 6.5e+00 | 1.0e+01 | 429 |
fr | 2000_07 | 1dq3:A | 1.2 | 2.0 | -7.338617e-02 | -3.814860e-01 | 0.0e+00 | 8.8e-01 | 9.8e+01 | 5.2 | 9.7e+00 | 1.3e+01 | 454 |
fr | 2000_07 | 1dqn:B | 1.8 | 3.3 | -2.308828e+00 | -8.665826e-01 | 0.0e+00 | 0.0e+00 | 1.0e+02 | 5.6 | 2.5e+01 | 3.5e+01 | 230 |
fr | 2000_07 | 1dqz:A | 1.2 | 3.3 | -2.136121e+00 | -3.076662e-01 | 0.0e+00 | 0.0e+00 | 9.8e+01 | 4.9 | 1.1e+01 | 1.6e+01 | 280 |
fr | 2000_07 | 1dtd:B | 0.8 | 0 | -1.908750e+01 | -1.000266e+01 | 8.2e+00 | 1.6e+01 | 5.2e+01 | 3.2 | 0.0e+00 | 0.0e+00 | 61 |
fr | 2000_07 | 1dus:A | 0.9 | 1.2 | -3.416867e+00 | 2.382366e-02 | 1.6e+00 | 5.2e+00 | 9.2e+01 | 4.9 | 1.2e+01 | 2.2e+01 | 192 |
fr | 2000_07 | 1dvo:A | 2.4 | 1.6 | -3.927724e+00 | -1.892955e+00 | 1.3e+00 | 2.0e+00 | 1.0e+02 | 4.0 | 2.2e+01 | 3.2e+01 | 152 |
fr | 2000_07 | 1ec5:A | 6.9 | 4.2 | 4.796020e+01 | 4.696104e+01 | 9.0e+01 | 9.6e+01 | 9.8e+01 | 3.6 | 9.0e+01 | 9.4e+01 | 48 |
fr | 2000_07 | 1ej6:D | 1.5 | 1.6 | -6.911241e-01 | -6.163227e-01 | 0.0e+00 | 7.2e-01 | 1.0e+02 | 4.8 | 9.6e+00 | 1.4e+01 | 417 |
fr | 2000_07 | 1eom:A | 17.0 | 1.2 | -1.932021e+00 | 9.746895e+00 | 5.3e+00 | 1.4e+01 | 8.7e+01 | 3.8 | 2.8e+00 | 3.2e+00 | 283 |
fr | 2000_07 | 1eww:A | 1.7 | 1.2 | -7.227639e+00 | -5.420724e+00 | 3.3e+00 | 4.4e+00 | 9.3e+01 | 3.1 | 2.6e+01 | 3.3e+01 | 90 |
fr | 2000_07 | 1exk:A | 1.3 | 1.2 | -8.036678e+00 | -7.481883e+00 | 1.3e+00 | 3.8e+00 | 9.6e+01 | 6.1 | 2.4e+01 | 3.3e+01 | 79 |
fr | 2000_07 | 1f02:T | 2.7 | 2.6 | -9.543750e+00 | -3.969197e+00 | 1.5e+00 | 3.0e+00 | 9.7e+01 | 6.2 | 2.4e+01 | 2.9e+01 | 66 |
fr | 2000_07 | 1f0j:A | 1.9 | 0 | -1.792629e+00 | -2.162442e-01 | 5.7e-01 | 2.3e+00 | 9.6e+01 | 4.7 | 0.0e+00 | 0.0e+00 | 351 |
fr | 2000_07 | 1f0k:A | 1.7 | 3.3 | -1.296176e+00 | 8.837343e-01 | 0.0e+00 | 0.0e+00 | 9.7e+01 | 5.4 | 1.1e+01 | 1.5e+01 | 351 |
fr | 2000_07 | 1f37:A | 0.7 | 0 | -6.358946e+00 | 6.292320e-01 | 0.0e+00 | 0.0e+00 | 8.8e+01 | 3.5 | 0.0e+00 | 0.0e+00 | 109 |
fr | 2000_07 | 1f8x:A | 1.4 | 2.0 | -3.512871e+00 | -1.748884e+00 | 6.4e-01 | 6.4e-01 | 1.0e+02 | 3.8 | 2.0e+01 | 2.1e+01 | 156 |
fr | 2000_07 | 1f94:A | 7.3 | 0 | -3.288119e+00 | 1.379379e+01 | 3.0e+01 | 4.8e+01 | 9.4e+01 | 8.5 | 0.0e+00 | 0.0e+00 | 63 |
fr | 2000_07 | 1fb8:A | 13.8 | 5.3 | -6.567742e+00 | 2.245597e+01 | 7.7e+01 | 8.4e+01 | 8.8e+01 | 7.3 | 7.9e+01 | 8.3e+01 | 106 |
fr | 2000_07 | 1qjv:A | 1.3 | 1.2 | -2.755491e+00 | -5.129311e-01 | 8.8e-01 | 1.8e+00 | 6.4e+01 | 3.7 | 6.7e+00 | 1.2e+01 | 342 |
fr | 2000_07 | 1qo2:B | 1.4 | 0 | -2.848801e+00 | -1.288450e+00 | 1.7e+00 | 3.8e+00 | 8.9e+01 | 3.0 | 0.0e+00 | 0.0e+00 | 238 |
fr | 2000_07 | 1qu7:A | 1.7 | 3.7 | -3.724390e+00 | 4.095442e+00 | 0.0e+00 | 0.0e+00 | 7.2e+01 | 5.2 | 1.8e+01 | 1.8e+01 | 227 |
fr | 2000_07 | 1thf:D | 2.2 | 1.2 | -1.800612e+00 | 3.751935e-01 | 1.6e+00 | 2.8e+00 | 9.6e+01 | 5.2 | 7.1e+00 | 1.1e+01 | 253 |
fr | 2000_07 | 3cao:A | 2.1 | 2.8 | -5.966707e+00 | -5.289990e+00 | 0.0e+00 | 9.8e-01 | 1.0e+02 | 5.2 | 2.0e+01 | 2.6e+01 | 102 |
fr | 2000_07 | THIS_month:psum | 2.9 | 1.8 | 35.2 | 10.6 | 11.4 | 14.8 | 90.7 | 4.8 | 19.1 | 23.0 | 196.8 |
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
psum | percentage over all proteins |
sig | standard deviation |
errsig | significant difference (to distinguish between two methods) |
type | prediction type |
date | date when added [yyyy_mm_dd] |