| METHOD about: | ../../../doc/explain_methods.html#PX_about_loopp |
| METHOD url: | LOOPP |
| TYPE : | fr |
| NPROT : | 483 |
| NWEEKS : | 184 |
| NOTE 1 : | here ALL results obtained for LOOPP in month 2000_07 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2003_02_24 | psum | 4.6 | 2.6 | 1.7 | 4.5 | 12.7 | 18.8 | 95.7 | 4.7 | 28.6 | 34.4 | 181.1 |
| fr | 2000_07 | THIS_month:psum | 5.6 | 2.6 | 14.0 | 9.9 | 19.0 | 25.3 | 96.1 | 4.8 | 31.4 | 37.3 | 196.8 |
| fr | 2000_07 | 1c01:A | 1.2 | 0.7 | -8.538654e+00 | -7.364376e+00 | 5.3e+00 | 9.2e+00 | 9.3e+01 | 4.4 | 1.8e+01 | 3.6e+01 | 76 |
| fr | 2000_07 | 1c55:A | 5.0 | 3.7 | 2.256043e+01 | 1.727434e+01 | 8.0e+01 | 8.5e+01 | 8.8e+01 | 5.6 | 7.8e+01 | 8.0e+01 | 40 |
| fr | 2000_07 | 1c8u:A | 2.6 | 2.3 | -1.330601e+00 | -3.210188e-02 | 3.5e-01 | 1.4e+00 | 9.9e+01 | 6.7 | 1.5e+01 | 1.8e+01 | 285 |
| fr | 2000_07 | 1dow:B | 0.7 | 0 | -2.036000e+01 | -1.970323e+01 | 1.6e+01 | 3.5e+01 | 9.7e+01 | 3.6 | 0.0e+00 | 0.0e+00 | 31 |
| fr | 2000_07 | 1dp4:C | 4.3 | 2.8 | 1.763118e+00 | 1.177985e+00 | 9.3e-01 | 2.8e+00 | 9.6e+01 | 4.0 | 1.3e+01 | 1.8e+01 | 429 |
| fr | 2000_07 | 1dq3:A | 2.1 | 2.0 | 2.942718e-01 | -3.047749e-01 | 2.2e-01 | 1.8e+00 | 9.8e+01 | 5.2 | 9.7e+00 | 1.3e+01 | 454 |
| fr | 2000_07 | 1dqn:B | 16.8 | 3.9 | 1.393954e+01 | 1.300178e+01 | 3.4e+01 | 4.4e+01 | 1.0e+02 | 5.6 | 5.1e+01 | 5.4e+01 | 230 |
| fr | 2000_07 | 1dqz:A | 6.0 | 3.3 | -1.375972e+00 | 9.159153e-01 | 1.4e+00 | 3.2e+00 | 9.8e+01 | 4.9 | 2.6e+01 | 3.4e+01 | 280 |
| fr | 2000_07 | 1dtd:B | 1.2 | 0.7 | -1.110545e+01 | -8.277556e+00 | 9.8e+00 | 2.0e+01 | 9.0e+01 | 3.2 | 1.1e+01 | 2.0e+01 | 61 |
| fr | 2000_07 | 1dus:A | 16.1 | 4.1 | -3.121183e+00 | 1.090397e+01 | 4.0e+01 | 5.1e+01 | 9.2e+01 | 4.9 | 5.3e+01 | 5.7e+01 | 192 |
| fr | 2000_07 | 1dvo:A | 2.8 | 2.0 | -3.927724e+00 | 8.064902e-01 | 1.3e+00 | 3.3e+00 | 1.0e+02 | 4.0 | 2.2e+01 | 3.2e+01 | 152 |
| fr | 2000_07 | 1ec5:A | 6.9 | 4.2 | 4.796020e+01 | 4.696104e+01 | 9.0e+01 | 9.6e+01 | 9.8e+01 | 3.6 | 9.0e+01 | 9.4e+01 | 48 |
| fr | 2000_07 | 1ej6:D | 2.8 | 2.3 | -2.219416e-01 | 1.175106e+00 | 1.2e+00 | 2.4e+00 | 1.0e+02 | 4.8 | 1.1e+01 | 1.5e+01 | 417 |
| fr | 2000_07 | 1eom:A | 19.9 | 3.1 | -1.595243e+00 | 1.151681e+01 | 2.2e+01 | 3.0e+01 | 9.8e+01 | 3.8 | 6.1e+01 | 6.6e+01 | 283 |
| fr | 2000_07 | 1eww:A | 1.7 | 1.2 | -7.227639e+00 | -5.420724e+00 | 5.6e+00 | 1.1e+01 | 9.3e+01 | 3.1 | 2.6e+01 | 3.3e+01 | 90 |
| fr | 2000_07 | 1exk:A | 1.7 | 2.0 | -8.036678e+00 | -5.928251e+00 | 1.3e+00 | 7.6e+00 | 9.6e+01 | 6.1 | 2.4e+01 | 3.5e+01 | 79 |
| fr | 2000_07 | 1f02:T | 2.7 | 2.8 | -9.254545e+00 | 1.092345e+01 | 9.1e+00 | 2.4e+01 | 1.0e+02 | 6.2 | 3.6e+01 | 3.9e+01 | 66 |
| fr | 2000_07 | 1f0j:A | 2.2 | 3.7 | 3.593316e-01 | 1.279682e+00 | 8.5e-01 | 2.3e+00 | 9.8e+01 | 4.7 | 1.5e+01 | 2.1e+01 | 351 |
| fr | 2000_07 | 1f0k:A | 5.0 | 3.3 | 3.689686e-01 | 4.520760e+00 | 7.1e+00 | 1.3e+01 | 1.0e+02 | 5.4 | 2.3e+01 | 4.1e+01 | 351 |
| fr | 2000_07 | 1f37:A | 3.9 | 2.6 | -3.450344e+00 | 1.917065e+00 | 7.3e+00 | 1.7e+01 | 9.8e+01 | 3.5 | 2.8e+01 | 3.5e+01 | 109 |
| fr | 2000_07 | 1f8x:A | 3.3 | 2.6 | -6.859162e-01 | 1.938827e+00 | 1.9e+00 | 4.5e+00 | 1.0e+02 | 3.8 | 2.0e+01 | 2.2e+01 | 156 |
| fr | 2000_07 | 1f94:A | 8.5 | 3.1 | 2.530960e+01 | 2.914261e+01 | 7.6e+01 | 9.0e+01 | 9.7e+01 | 8.5 | 7.9e+01 | 8.6e+01 | 63 |
| fr | 2000_07 | 1fb8:A | 13.8 | 5.3 | -5.762264e+00 | 2.245597e+01 | 7.7e+01 | 8.4e+01 | 1.0e+02 | 7.3 | 7.9e+01 | 8.3e+01 | 106 |
| fr | 2000_07 | 1qjv:A | 2.3 | 2.0 | -2.038491e+00 | -5.129311e-01 | 8.8e-01 | 1.8e+00 | 8.6e+01 | 3.7 | 8.8e+00 | 1.2e+01 | 342 |
| fr | 2000_07 | 1qo2:B | 7.4 | 0 | -2.848801e+00 | 7.280954e+00 | 5.0e+00 | 1.1e+01 | 8.9e+01 | 3.0 | 0.0e+00 | 0.0e+00 | 238 |
| fr | 2000_07 | 1qu7:A | 2.3 | 3.7 | -2.936538e+00 | 4.095442e+00 | 1.3e+00 | 1.8e+00 | 9.2e+01 | 5.2 | 1.8e+01 | 1.8e+01 | 227 |
| fr | 2000_07 | 1thf:D | 4.8 | 2.8 | -1.800612e+00 | 1.178523e+00 | 1.6e+00 | 2.8e+00 | 9.6e+01 | 5.2 | 9.5e+00 | 1.8e+01 | 253 |
| fr | 2000_07 | 3cao:A | 9.9 | 2.8 | -4.479037e+00 | 1.068919e+01 | 3.5e+01 | 5.3e+01 | 1.0e+02 | 5.2 | 5.6e+01 | 6.6e+01 | 102 |
| fr | 2000_07 | THIS_month:psum | 5.6 | 2.6 | 14.0 | 9.9 | 19.0 | 25.3 | 96.1 | 4.8 | 31.4 | 37.3 | 196.8 |
| fr | 2003_02_24 | psum | 4.6 | 2.6 | 1.7 | 4.5 | 12.7 | 18.8 | 95.7 | 4.7 | 28.6 | 34.4 | 181.1 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |