| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2000_09 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2000_09 | THIS_month:psum | 3 | 2.7 | 12.6 | 6.4 | 11.5 | 15.9 | 50.3 | 1 | 22.6 | 27.1 | 138.1 |
| fr | 2000_09 | 1d1n:A | 11.8 | 4.9 | -7.830769e+00 | 1.859589e+01 | 6.9e+01 | 7.8e+01 | 7.9e+01 | 1 | 7.0e+01 | 7.7e+01 | 99 |
| fr | 2000_09 | 1eks:A | 2.2 | 3.1 | -9.980863e+00 | 1.150755e+00 | 1.4e+00 | 8.6e+00 | 4.1e+01 | 1 | 2.0e+01 | 2.3e+01 | 140 |
| fr | 2000_09 | 1evs:A | 2.2 | 2.8 | 1.265269e+01 | 5.637020e+00 | 1.8e+00 | 3.7e+00 | 3.7e+01 | 1 | 1.4e+01 | 1.7e+01 | 163 |
| fr | 2000_09 | 1few:A | 1.4 | 2.3 | -8.514554e-02 | 3.198758e-02 | 5.8e-01 | 2.9e+00 | 5.0e+01 | 1 | 1.4e+01 | 1.7e+01 | 173 |
| fr | 2000_09 | 1fjf:K | 1.6 | 1.6 | -1.646794e+01 | -1.710606e+00 | 3.4e+00 | 7.6e+00 | 3.1e+01 | 1 | 1.8e+01 | 2.1e+01 | 119 |
| fr | 2000_09 | 1fjf:N | 0.9 | 1.6 | -2.024588e+01 | -9.518525e+00 | 1.8e+01 | 2.5e+01 | 5.0e+01 | 1 | 2.0e+01 | 2.3e+01 | 60 |
| fr | 2000_09 | 1fjg:B | 2.6 | 3.3 | -6.545265e+00 | -9.544691e-01 | 1.7e+00 | 3.4e+00 | 3.0e+01 | 1 | 1.3e+01 | 1.5e+01 | 237 |
| fr | 2000_09 | 1fjg:I | 2.6 | 2.0 | -5.808481e+00 | 6.922000e+00 | 7.9e-01 | 4.7e+00 | 5.7e+01 | 1 | 2.3e+01 | 2.8e+01 | 127 |
| fr | 2000_09 | 1fjg:L | 1.7 | 3.1 | -6.227213e+00 | -3.452644e+00 | 7.2e+00 | 1.0e+01 | 7.8e+01 | 1 | 1.2e+01 | 2.3e+01 | 125 |
| fr | 2000_09 | THIS_month:psum | 3 | 2.7 | 12.6 | 6.4 | 11.5 | 15.9 | 50.3 | 1 | 22.6 | 27.1 | 138.1 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |