| METHOD about: | ../../../doc/explain_methods.html#PX_about_psiblast |
| METHOD url: | PSI-BLAST |
| TYPE : | fr |
| NPROT : | 548 |
| NWEEKS : | 236 |
| NOTE 1 : | here ALL results obtained for PSI-BLAST in month 2000_12 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| fr | 2000_12 | THIS_month:psum | 4.7 | 2.5 | 13.6 | 12.3 | 21.4 | 27.2 | 55 | 13.5 | 32.1 | 36.6 | 143.2 |
| fr | 2000_12 | 1ci6:A | 8.2 | 5.0 | -1.131111e+01 | 3.839057e+01 | 9.6e+01 | 9.6e+01 | 9.6e+01 | 7e-04 | 8.8e+01 | 9.5e+01 | 56 |
| fr | 2000_12 | 1dkc:A | 0.8 | 2.0 | -1.695449e+01 | -1.418255e+01 | 7.9e+00 | 2.1e+01 | 9.5e+01 | 6.2 | 4.2e+01 | 5.3e+01 | 38 |
| fr | 2000_12 | 1dl9:A | 1.4 | 2.0 | -1.110477e+01 | -1.679853e+00 | 3.7e+00 | 6.2e+00 | 2.3e+01 | 3.8 | 1.1e+01 | 1.4e+01 | 243 |
| fr | 2000_12 | 1e2x:A | 6.4 | 3.9 | -8.954829e+00 | 6.301395e+00 | 1.6e+01 | 1.8e+01 | 2.9e+01 | 0.12 | 1.9e+01 | 2.2e+01 | 222 |
| fr | 2000_12 | 1ekt:A | 0.3 | 0.0 | -3.054000e+01 | -1.152453e+01 | 1.9e+00 | 5.7e+00 | 3.8e+01 | 6.3 | 1.5e+01 | 2.3e+01 | 53 |
| fr | 2000_12 | 1eo1:A | 3.0 | 2.0 | -1.419939e+01 | -2.426590e+00 | 8.1e-01 | 2.4e+00 | 3.5e+01 | 0.62 | 1.9e+01 | 2.3e+01 | 124 |
| fr | 2000_12 | 1f53:A | 0.6 | 1.6 | -1.174615e+01 | -2.374630e+00 | 8.3e+00 | 1.1e+01 | 6.2e+01 | 5.2 | 2.0e+01 | 2.5e+01 | 84 |
| fr | 2000_12 | 1f62:A | 1.1 | 2.0 | -3.393333e+01 | -1.197647e+01 | 1.6e+01 | 2.5e+01 | 3.5e+01 | 11 | 2.5e+01 | 2.9e+01 | 51 |
| fr | 2000_12 | 1f6d:A | 22.4 | 3.1 | 1.545864e+00 | 6.925750e+00 | 2.5e+01 | 3.9e+01 | 8.6e+01 | 3e-14 | 4.3e+01 | 4.9e+01 | 366 |
| fr | 2000_12 | 1fjn:A | 0.5 | 0 | -3.393333e+01 | -1.566154e+01 | 1.5e+01 | 2.3e+01 | 4.6e+01 | 204 | 0.0e+00 | 0.0e+00 | 39 |
| fr | 2000_12 | 1fu1:A | 1.9 | 2.3 | -9.303295e+00 | 3.286929e-01 | 7.5e+00 | 1.3e+01 | 3.7e+01 | 7.0 | 1.2e+01 | 1.4e+01 | 174 |
| fr | 2000_12 | 1fwl:A | 2.2 | 2.6 | -6.962379e-01 | -9.461072e-01 | 6.8e-01 | 3.4e+00 | 2.7e+01 | 0.55 | 1.3e+01 | 1.5e+01 | 296 |
| fr | 2000_12 | 1fx3:A | 2.5 | 2.3 | -1.357333e+01 | -3.007326e+00 | 4.2e+00 | 9.8e+00 | 3.1e+01 | 0.53 | 1.5e+01 | 2.2e+01 | 143 |
| fr | 2000_12 | 1fxk:A | 5.4 | 3.7 | 1.013644e+01 | 1.100874e+01 | 9.7e-01 | 3.9e+00 | 5.7e+01 | 0.25 | 4.0e+01 | 4.2e+01 | 103 |
| fr | 2000_12 | 1fxk:C | 2.2 | 2.0 | -1.197093e+00 | 2.138812e+00 | 1.5e+00 | 2.3e+00 | 6.2e+01 | 0.02 | 2.0e+01 | 2.3e+01 | 133 |
| fr | 2000_12 | 1g3j:B | 1.6 | 1.6 | -1.850909e+01 | -1.487527e+01 | 1.5e+01 | 3.2e+01 | 8.0e+01 | 7.6 | 3.4e+01 | 4.1e+01 | 41 |
| fr | 2000_12 | 1g6g:A | 11.0 | 2.6 | -7.523582e+00 | 1.716805e+01 | 4.9e+01 | 5.4e+01 | 6.4e+01 | 6e-05 | 5.7e+01 | 6.0e+01 | 127 |
| fr | 2000_12 | 1g99:A | 2.6 | 2.8 | 1.295714e+01 | 1.290870e-01 | 7.5e-01 | 2.3e+00 | 1.0e+01 | 1.3 | 5.8e+00 | 8.0e+00 | 398 |
| fr | 2000_12 | 1gak:A | 16.2 | 5.3 | 1.729544e+01 | 1.449245e+01 | 6.4e+01 | 7.6e+01 | 8.7e+01 | 0.01 | 7.2e+01 | 7.8e+01 | 137 |
| fr | 2000_12 | 1hd6:A | 5.4 | 3.7 | 2.640947e+01 | 2.640947e+01 | 9.5e+01 | 1.0e+02 | 1.0e+02 | 17 | 9.2e+01 | 9.7e+01 | 37 |
| fr | 2000_12 | THIS_month:psum | 4.7 | 2.5 | 13.6 | 12.3 | 21.4 | 27.2 | 55 | 13.5 | 32.1 | 36.6 | 143.2 |
| fr | 2004_03_05 | psum | 3.1 | 2.3 | 2.3 | 3.0 | 14.5 | 19.5 | 48.4 | 14.8 | 25.4 | 28.9 | 152.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |