| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_03 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_03 | THIS_month:psum | 3.2 | 2.8 | 6.5 | 11.9 | 19.0 | 55.5 | 1 | 25.8 | 29.8 | 131.7 | |
| fr | 2001_03 | 1fw9:A | 0.9 | 2.0 | -1.327826e+01 | -1.022465e+00 | 2.4e+00 | 4.9e+00 | 2.8e+01 | 1 | 9.8e+00 | 1.3e+01 | 164 |
| fr | 2001_03 | 1g2h:A | 2.5 | 2.3 | -1.884063e+01 | -6.765805e+00 | 1.3e+01 | 3.1e+01 | 5.2e+01 | 1 | 3.6e+01 | 3.9e+01 | 61 |
| fr | 2001_03 | 1gef:A | 2.4 | 2.8 | -6.844903e+00 | 9.069767e-01 | 7.5e+00 | 1.2e+01 | 6.4e+01 | 1 | 2.2e+01 | 2.6e+01 | 120 |
| fr | 2001_03 | 1gef:D | 2.7 | 2.3 | -6.971284e+00 | 4.776060e-01 | 8.3e+00 | 1.3e+01 | 7.4e+01 | 1 | 2.8e+01 | 3.3e+01 | 109 |
| fr | 2001_03 | 1hn5:D | 5.8 | 3.7 | -1.197647e+01 | -1.781248e-01 | 6.4e+00 | 1.4e+01 | 2.0e+01 | 1 | 1.5e+01 | 1.6e+01 | 250 |
| fr | 2001_03 | 1ho4:A | 4.1 | 3.7 | -3.456175e+00 | 1.461614e+00 | 3.7e+00 | 8.7e+00 | 4.7e+01 | 1 | 1.6e+01 | 2.0e+01 | 242 |
| fr | 2001_03 | 1hs7:A | 2.0 | 1.6 | -1.713566e+00 | 1.535922e+00 | 1.0e+00 | 8.2e+00 | 6.0e+01 | 1 | 2.0e+01 | 2.6e+01 | 97 |
| fr | 2001_03 | 1i27:A | 1.5 | 2.8 | -9.695238e+00 | -8.275786e+00 | 1.4e+00 | 1.4e+01 | 8.6e+01 | 1 | 2.3e+01 | 2.9e+01 | 73 |
| fr | 2001_03 | 1i81:F | 7.3 | 4.4 | -1.267490e+01 | 2.848852e+01 | 6.4e+01 | 6.6e+01 | 6.9e+01 | 1 | 6.3e+01 | 6.7e+01 | 70 |
| fr | 2001_03 | THIS_month:psum | 3.2 | 2.8 | 6.5 | 11.9 | 19.0 | 55.5 | 1 | 25.8 | 29.8 | 131.7 | |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |