| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2001_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2001_04 | THIS_month:psum | 3.5 | 2.6 | 5.7 | 11.1 | 13.0 | 41.1 | 1 | 16.7 | 18.9 | 185.6 | |
| fr | 2001_04 | 1fo8:A | 1.6 | 2.8 | -1.221600e+01 | -1.579304e+00 | 2.1e+00 | 4.5e+00 | 1.5e+01 | 1 | 7.6e+00 | 8.2e+00 | 330 |
| fr | 2001_04 | 1fvz:A | 3.8 | 3.7 | -5.978979e+00 | 2.393386e+00 | 3.7e+00 | 5.2e+00 | 3.8e+01 | 1 | 1.1e+01 | 1.7e+01 | 269 |
| fr | 2001_04 | 1g57:A | 1.7 | 3.1 | -9.610496e+00 | -2.154276e+00 | 2.9e+00 | 3.4e+00 | 3.0e+01 | 1 | 1.2e+01 | 1.3e+01 | 205 |
| fr | 2001_04 | 1g58:B | 2.1 | 3.1 | -8.722523e+00 | 1.656526e+00 | 1.0e+00 | 3.6e+00 | 3.6e+01 | 1 | 1.3e+01 | 1.4e+01 | 196 |
| fr | 2001_04 | 1g5c:F | 9.8 | 0 | -9.115614e+00 | 1.450791e+01 | 4.1e+01 | 4.1e+01 | 4.3e+01 | 1 | 0.0e+00 | 0.0e+00 | 155 |
| fr | 2001_04 | 1hyw:A | 2.2 | 2.0 | -1.301755e+01 | -2.671844e+00 | 3.4e+00 | 6.9e+00 | 7.2e+01 | 1 | 4.5e+01 | 4.8e+01 | 58 |
| fr | 2001_04 | 1i6h:I | 6.0 | 4.1 | -1.094249e+01 | 9.698220e+00 | 3.1e+01 | 3.4e+01 | 3.9e+01 | 1 | 3.3e+01 | 3.5e+01 | 119 |
| fr | 2001_04 | 1id1:A | 1.4 | 2.0 | -7.071278e+00 | 2.997378e-01 | 3.9e+00 | 5.9e+00 | 5.6e+01 | 1 | 1.2e+01 | 1.6e+01 | 153 |
| fr | 2001_04 | THIS_month:psum | 3.5 | 2.6 | 5.7 | 11.1 | 13.0 | 41.1 | 1 | 16.7 | 18.9 | 185.6 | |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |