| METHOD about: | ../../../doc/explain_methods.html#PX_about_3dpssm |
| METHOD url: | 3D-PSSM |
| TYPE : | fr |
| NPROT : | 484 |
| NWEEKS : | 219 |
| NOTE 1 : | here ALL results obtained for 3D-PSSM in month 2001_06 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| fr | 2001_06 | THIS_month:psum | 3.5 | 2.4 | 11.1 | 7.6 | 10.3 | 19.5 | 76.2 | 5.2 | 35.0 | 40 | 170 |
| fr | 2001_06 | 1e44:B | 1.5 | 1.2 | -7.828814e+00 | -5.269940e+00 | 1.0e+00 | 4.2e+00 | 8.1e+01 | 5.59e+00 | 2.5e+01 | 3.1e+01 | 96 |
| fr | 2001_06 | 1f45:B | 0.7 | 1.6 | -7.540741e+00 | -1.654952e+00 | 0.0e+00 | 7.5e-01 | 6.1e+01 | 1.73e+00 | 1.4e+01 | 1.8e+01 | 133 |
| fr | 2001_06 | 1f46:A | 2.1 | 0.7 | -6.100813e+00 | 2.652085e+00 | 5.8e+00 | 9.4e+00 | 7.2e+01 | 1.50e+00 | 2.4e+01 | 2.7e+01 | 139 |
| fr | 2001_06 | 1gd5:A | 1.4 | 1.2 | -9.627623e-01 | -1.642643e+00 | 1.5e+00 | 3.1e+00 | 6.7e+01 | 4.53e+00 | 1.8e+01 | 1.8e+01 | 130 |
| fr | 2001_06 | 1h4u:A | 1.7 | 1.2 | -3.966234e+00 | -8.717422e-01 | 0.0e+00 | 0.0e+00 | 6.3e+01 | 1.60e+00 | 7.3e+00 | 1.2e+01 | 245 |
| fr | 2001_06 | 1h9e:A | 0.6 | 1.6 | -1.310790e+01 | -1.090696e+01 | 5.4e+00 | 1.4e+01 | 7.5e+01 | 8.99e+00 | 3.6e+01 | 4.1e+01 | 56 |
| fr | 2001_06 | 1h9f:A | 1.3 | 2.8 | -1.094204e+01 | -9.918081e+00 | 1.2e+01 | 2.1e+01 | 9.3e+01 | 1.04e+01 | 2.6e+01 | 4.2e+01 | 57 |
| fr | 2001_06 | 1hgz:A | 3.9 | 3.5 | -1.133654e+01 | 8.759932e+00 | 2.8e+01 | 8.5e+01 | 9.1e+01 | 1.60e+01 | 8.0e+01 | 8.3e+01 | 46 |
| fr | 2001_06 | 1ho8:A | 12.1 | 3.7 | -9.244929e-01 | 2.607834e+00 | 1.8e+00 | 5.1e+00 | 9.4e+01 | 6.84e-02 | 3.8e+01 | 4.1e+01 | 447 |
| fr | 2001_06 | 1hs6:A | 7.1 | 3.7 | 3.572528e+00 | 1.090317e+00 | 3.6e+00 | 8.0e+00 | 4.4e+01 | 1.04e-02 | 2.4e+01 | 2.7e+01 | 610 |
| fr | 2001_06 | 1i8u:A | 0.8 | 2.6 | -5.942678e+00 | 1.874777e+00 | 1.1e+00 | 2.1e+00 | 5.4e+01 | 7.32e+00 | 2.6e+01 | 3.4e+01 | 189 |
| fr | 2001_06 | 1iaj:A | 1.0 | 2.0 | -3.770370e+00 | -1.935189e+00 | 0.0e+00 | 4.0e-01 | 6.4e+01 | 6.16e-01 | 1.1e+01 | 1.3e+01 | 253 |
| fr | 2001_06 | 1iby:A | 10.2 | 4.6 | 2.058781e+01 | 2.180947e+01 | 1.2e+01 | 2.1e+01 | 9.8e+01 | 1.68e-06 | 7.5e+01 | 7.6e+01 | 112 |
| fr | 2001_06 | 1iij:A | 3.6 | 3.7 | 9.142152e+00 | 1.719285e+01 | 5.4e+01 | 7.7e+01 | 9.7e+01 | 1.71e+01 | 8.0e+01 | 8.3e+01 | 35 |
| fr | 2001_06 | 1im3:D | 0.9 | 2.6 | -8.982351e+00 | -1.608893e+00 | 5.3e+00 | 9.5e+00 | 7.2e+01 | 8.52e+00 | 2.5e+01 | 3.4e+01 | 95 |
| fr | 2001_06 | 1j7r:A | 7.8 | 2.8 | -8.455462e+00 | 4.984917e+00 | 3.4e+01 | 5.2e+01 | 9.4e+01 | 1.39e-01 | 5.1e+01 | 6.0e+01 | 77 |
| fr | 2001_06 | THIS_month:psum | 3.5 | 2.4 | 11.1 | 7.6 | 10.3 | 19.5 | 76.2 | 5.2 | 35.0 | 40 | 170 |
| fr | 2004_03_05 | psum | 4.4 | 2.5 | 2.3 | 4.7 | 16.0 | 23.6 | 77.9 | 7.1 | 35.2 | 41.2 | 147.9 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |