METHOD about: | ../../../doc/explain_methods.html#PX_about_loopp |
METHOD url: | LOOPP |
TYPE : | fr |
NPROT : | 483 |
NWEEKS : | 184 |
NOTE 1 : | here ALL results obtained for LOOPP in month 2001_12 are given, i.e. NOT those for a common subset! |
NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
fr | 2001_12 | THIS_month:psum | 3.2 | 2.1 | 1.8 | 3.2 | 4.2 | 6.7 | 90.4 | 4.4 | 19.4 | 25.9 | 218.6 |
fr | 2001_12 | 1hnn:A | 0.8 | 1.2 | -2.813117e+00 | -9.828209e-01 | 3.8e-01 | 7.7e-01 | 8.3e+01 | 3.5 | 8.4e+00 | 1.4e+01 | 261 |
fr | 2001_12 | 1hqz:4 | 5.9 | 2.6 | -3.809068e+00 | 2.233170e+00 | 3.6e+00 | 8.0e+00 | 9.8e+01 | 6.6 | 1.2e+01 | 2.1e+01 | 137 |
fr | 2001_12 | 1i3b:A | 0.8 | 0.7 | -5.129795e+00 | 9.279261e-01 | 8.5e-01 | 3.4e+00 | 9.7e+01 | 2.8 | 2.8e+01 | 4.1e+01 | 118 |
fr | 2001_12 | 1im5:A | 2.6 | 2.6 | -2.710846e+00 | 3.125219e+00 | 5.6e-01 | 3.9e+00 | 9.7e+01 | 5.8 | 2.5e+01 | 3.0e+01 | 179 |
fr | 2001_12 | 1jbj:A | 1.0 | 1.2 | -3.430779e+00 | -8.077754e-01 | 0.0e+00 | 5.4e-01 | 9.4e+01 | 3.1 | 1.1e+01 | 1.5e+01 | 186 |
fr | 2001_12 | 1jgs:A | 4.0 | 2.8 | 2.169623e+00 | 7.240709e+00 | 7.2e-01 | 2.2e+00 | 9.9e+01 | 4.8 | 1.7e+01 | 2.1e+01 | 138 |
fr | 2001_12 | 1jmv:B | 2.2 | 1.6 | -4.724265e+00 | 9.427900e-01 | 1.5e+00 | 6.6e+00 | 9.4e+01 | 3.2 | 1.8e+01 | 3.4e+01 | 137 |
fr | 2001_12 | 1jra:A | 2.2 | 3.5 | 1.816730e+00 | 4.934203e+00 | 0.0e+00 | 6.6e+00 | 1.0e+02 | 5.7 | 3.8e+01 | 4.6e+01 | 106 |
fr | 2001_12 | 1jtx:A | 1.4 | 3.3 | -1.899353e+00 | 4.550864e-01 | 5.4e-01 | 2.7e+00 | 9.7e+01 | 5.8 | 2.2e+01 | 3.1e+01 | 186 |
fr | 2001_12 | 1ju4:A | 1.8 | 2.8 | -1.035550e+00 | -7.568689e-02 | 3.5e-01 | 1.6e+00 | 9.8e+01 | 2.6 | 8.2e+00 | 1.2e+01 | 570 |
fr | 2001_12 | 1k2f:A | 2.4 | 3.9 | -3.314036e+00 | 1.156772e+00 | 0.0e+00 | 5.3e-01 | 9.7e+01 | 4.1 | 5.3e+00 | 2.2e+01 | 190 |
fr | 2001_12 | 1k6i:A | 2.5 | 1.2 | -2.084771e+00 | 1.249683e-01 | 3.1e-01 | 9.4e-01 | 7.5e+01 | 5.3 | 7.5e+00 | 8.8e+00 | 318 |
fr | 2001_12 | 1k7b:A | 4.4 | 2.8 | -1.607368e+01 | 7.793164e+00 | 6.9e+01 | 7.9e+01 | 9.0e+01 | 4.1 | 7.4e+01 | 7.9e+01 | 42 |
fr | 2001_12 | 1k8k:C | 23.9 | 4.7 | 1.306167e+00 | 1.278873e+01 | 1.7e+00 | 4.8e+00 | 7.0e+01 | 7.0 | 5.1e+01 | 5.6e+01 | 354 |
fr | 2001_12 | 1k8k:D | 0.8 | 2.3 | -2.023922e+00 | 4.675406e-01 | 2.5e+00 | 3.5e+00 | 1.0e+02 | 5.1 | 8.5e+00 | 1.2e+01 | 284 |
fr | 2001_12 | 1k8k:F | 1.7 | 2.6 | 2.081916e+00 | 2.471430e+00 | 6.0e-01 | 4.2e+00 | 9.5e+01 | 4.5 | 1.7e+01 | 2.6e+01 | 167 |
fr | 2001_12 | 1k8k:G | 1.5 | 0.7 | -4.027489e+00 | -3.302215e+00 | 3.6e+00 | 5.0e+00 | 7.5e+01 | 5.2 | 8.6e+00 | 1.0e+01 | 139 |
fr | 2001_12 | 1k97:A | 2.0 | 0 | -1.133387e+00 | -1.099864e+00 | 0.0e+00 | 4.6e-01 | 9.1e+01 | 3.6 | 0.0e+00 | 0.0e+00 | 432 |
fr | 2001_12 | 1kc6:A | 2.2 | 0.7 | -2.126675e+00 | -1.967473e+00 | 8.0e-01 | 3.6e+00 | 7.7e+01 | 2.8 | 5.2e+00 | 1.2e+01 | 249 |
fr | 2001_12 | 1khh:A | 1.9 | 1.2 | -1.633841e+00 | 1.126732e+00 | 1.6e+00 | 3.1e+00 | 9.9e+01 | 4.7 | 1.8e+01 | 2.2e+01 | 193 |
fr | 2001_12 | 1kke:B | 1.5 | 2.3 | -4.099329e+00 | -7.225841e-01 | 0.0e+00 | 4.9e-01 | 7.3e+01 | 3.2 | 2.5e+01 | 3.3e+01 | 205 |
fr | 2001_12 | THIS_month:psum | 3.2 | 2.1 | 1.8 | 3.2 | 4.2 | 6.7 | 90.4 | 4.4 | 19.4 | 25.9 | 218.6 |
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
psum | percentage over all proteins |
sig | standard deviation |
errsig | significant difference (to distinguish between two methods) |
type | prediction type |
date | date when added [yyyy_mm_dd] |