METHOD about: | ../../../doc/explain_methods.html#PX_about_loopp |
METHOD url: | LOOPP |
TYPE : | fr |
NPROT : | 483 |
NWEEKS : | 184 |
NOTE 1 : | here ALL results obtained for LOOPP in month 2001_12 are given, i.e. NOT those for a common subset! |
NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fr | 2003_02_24 | psum | 4.6 | 2.6 | 1.7 | 4.5 | 12.7 | 18.8 | 95.7 | 4.7 | 28.6 | 34.4 | 181.1 |
fr | 2001_12 | THIS_month:psum | 6.9 | 3.2 | 2.4 | 7.8 | 14.3 | 19.5 | 96.6 | 4.4 | 34.4 | 42.8 | 218.6 |
fr | 2001_12 | 1hnn:A | 1.8 | 1.6 | -2.214956e+00 | 3.312676e+00 | 2.3e+00 | 6.9e+00 | 9.5e+01 | 3.5 | 2.2e+01 | 3.2e+01 | 261 |
fr | 2001_12 | 1hqz:4 | 14.8 | 2.8 | -1.284147e+00 | 1.561741e+01 | 4.7e+01 | 6.2e+01 | 1.0e+02 | 6.6 | 6.6e+01 | 6.9e+01 | 137 |
fr | 2001_12 | 1i3b:A | 2.7 | 1.6 | -4.920301e+00 | 9.279261e-01 | 2.5e+00 | 7.6e+00 | 9.7e+01 | 2.8 | 2.8e+01 | 4.1e+01 | 118 |
fr | 2001_12 | 1im5:A | 15.1 | 3.3 | -2.196201e+00 | 2.145003e+01 | 5.5e+01 | 6.3e+01 | 9.8e+01 | 5.8 | 3.9e+01 | 7.5e+01 | 179 |
fr | 2001_12 | 1jbj:A | 4.8 | 2.8 | 5.369796e-01 | 3.732166e+00 | 5.4e-01 | 2.2e+00 | 9.4e+01 | 3.1 | 2.5e+01 | 2.9e+01 | 186 |
fr | 2001_12 | 1jgs:A | 11.1 | 3.5 | 2.452588e+00 | 1.194587e+01 | 1.7e+01 | 2.7e+01 | 1.0e+02 | 4.8 | 5.2e+01 | 5.9e+01 | 138 |
fr | 2001_12 | 1jmv:B | 12.8 | 3.7 | 6.299635e+00 | 1.381465e+01 | 4.4e+01 | 6.0e+01 | 9.4e+01 | 3.2 | 6.5e+01 | 7.2e+01 | 137 |
fr | 2001_12 | 1jra:A | 5.1 | 3.7 | 1.816730e+00 | 4.934203e+00 | 4.7e+00 | 1.0e+01 | 1.0e+02 | 5.7 | 3.8e+01 | 4.6e+01 | 106 |
fr | 2001_12 | 1jtx:A | 14.6 | 5.3 | 2.850283e+00 | 1.143183e+01 | 2.4e+01 | 3.3e+01 | 9.8e+01 | 5.8 | 6.5e+01 | 7.5e+01 | 186 |
fr | 2001_12 | 1ju4:A | 4.5 | 2.8 | -1.035550e+00 | 3.984005e-01 | 7.0e-01 | 1.6e+00 | 9.8e+01 | 2.6 | 8.2e+00 | 1.2e+01 | 570 |
fr | 2001_12 | 1k2f:A | 3.5 | 3.9 | -3.004622e+00 | 2.212650e+00 | 2.6e+00 | 5.3e+00 | 9.9e+01 | 4.1 | 2.4e+01 | 3.4e+01 | 190 |
fr | 2001_12 | 1k6i:A | 7.7 | 5.9 | -1.053785e+00 | 1.175598e+01 | 1.3e+00 | 3.8e+00 | 1.0e+02 | 5.3 | 5.5e+01 | 6.0e+01 | 318 |
fr | 2001_12 | 1k7b:A | 4.9 | 3.5 | -1.607368e+01 | 1.825507e+01 | 8.1e+01 | 8.6e+01 | 9.0e+01 | 4.1 | 8.1e+01 | 8.6e+01 | 42 |
fr | 2001_12 | 1k8k:C | 23.9 | 4.7 | 1.306167e+00 | 1.278873e+01 | 1.7e+00 | 4.8e+00 | 9.6e+01 | 7.0 | 5.1e+01 | 5.6e+01 | 354 |
fr | 2001_12 | 1k8k:D | 2.8 | 3.1 | 2.418342e+00 | 8.237451e-01 | 2.5e+00 | 3.5e+00 | 1.0e+02 | 5.1 | 8.8e+00 | 1.4e+01 | 284 |
fr | 2001_12 | 1k8k:F | 2.8 | 3.1 | 2.081916e+00 | 3.669455e+00 | 2.4e+00 | 6.6e+00 | 1.0e+02 | 4.5 | 1.9e+01 | 2.8e+01 | 167 |
fr | 2001_12 | 1k8k:G | 3.5 | 1.6 | -3.536330e+00 | 3.588404e+00 | 5.8e+00 | 1.2e+01 | 9.0e+01 | 5.2 | 1.2e+01 | 1.2e+01 | 139 |
fr | 2001_12 | 1k97:A | 2.3 | 3.7 | -9.480815e-01 | -6.481642e-01 | 2.5e+00 | 3.0e+00 | 9.1e+01 | 3.6 | 1.0e+01 | 1.5e+01 | 432 |
fr | 2001_12 | 1kc6:A | 4.0 | 2.3 | -2.033572e+00 | -9.824973e-01 | 8.0e-01 | 3.6e+00 | 9.2e+01 | 2.8 | 1.2e+01 | 1.8e+01 | 249 |
fr | 2001_12 | 1khh:A | 2.2 | 2.3 | -8.581683e-01 | 1.264029e+00 | 1.6e+00 | 4.1e+00 | 9.9e+01 | 4.7 | 1.8e+01 | 3.3e+01 | 193 |
fr | 2001_12 | 1kke:B | 1.6 | 2.3 | -3.054000e+00 | -7.225841e-01 | 2.4e+00 | 5.4e+00 | 9.8e+01 | 3.2 | 2.5e+01 | 3.3e+01 | 205 |
fr | 2001_12 | THIS_month:psum | 6.9 | 3.2 | 2.4 | 7.8 | 14.3 | 19.5 | 96.6 | 4.4 | 34.4 | 42.8 | 218.6 |
fr | 2003_02_24 | psum | 4.6 | 2.6 | 1.7 | 4.5 | 12.7 | 18.8 | 95.7 | 4.7 | 28.6 | 34.4 | 181.1 |
psum | percentage over all proteins |
sig | standard deviation |
errsig | significant difference (to distinguish between two methods) |
type | prediction type |
date | date when added [yyyy_mm_dd] |