METHOD about: | ../../../doc/explain_methods.html#PX_about_loopp |
METHOD url: | LOOPP |
TYPE : | fr |
NPROT : | 483 |
NWEEKS : | 184 |
NOTE 1 : | here ALL results obtained for LOOPP in month 2002_02 are given, i.e. NOT those for a common subset! |
NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
fr | 2002_02 | THIS_month:psum | 3.0 | 1.5 | 12.1 | 8.7 | 5.9 | 11.0 | 90.0 | 4.6 | 19.8 | 24.6 | 185.7 |
fr | 2002_02 | 1g9p:A | 0.6 | 0.7 | -1.850909e+01 | -1.357333e+01 | 2.2e+00 | 1.1e+01 | 7.3e+01 | 2.7 | 1.6e+01 | 2.7e+01 | 45 |
fr | 2002_02 | 1h67:A | 0.7 | 1.2 | -7.269670e+00 | -2.670403e+00 | 3.7e+00 | 1.0e+01 | 7.8e+01 | 6.2 | 2.5e+01 | 3.1e+01 | 108 |
fr | 2002_02 | 1i1g:A | 1.9 | 0 | -9.395690e+00 | -4.312677e+00 | 0.0e+00 | 2.1e+00 | 4.6e+01 | 3.2 | 0.0e+00 | 0.0e+00 | 140 |
fr | 2002_02 | 1i2u:A | 3.4 | 2.6 | -1.297145e+00 | 2.162832e+01 | 1.6e+01 | 5.0e+01 | 1.0e+02 | 4.6 | 7.0e+01 | 7.0e+01 | 44 |
fr | 2002_02 | 1itp:A | 1.7 | 2.6 | -1.062726e+01 | -7.856384e+00 | 2.6e+00 | 3.9e+00 | 7.3e+01 | 2.9 | 2.2e+01 | 2.3e+01 | 77 |
fr | 2002_02 | 1jfm:A | 1.5 | 1.6 | 1.415672e+00 | 1.577181e+00 | 0.0e+00 | 1.1e+00 | 9.3e+01 | 5.3 | 2.5e+01 | 2.9e+01 | 174 |
fr | 2002_02 | 1jh5:A | 2.2 | 2.0 | -4.158654e+00 | -1.430983e+00 | 2.8e+00 | 9.0e+00 | 9.7e+01 | 4.6 | 2.2e+01 | 2.7e+01 | 144 |
fr | 2002_02 | 1jkz:A | 6.5 | 4.1 | 2.287817e+01 | 2.902446e+01 | 7.4e+01 | 8.0e+01 | 1.0e+02 | 4.7 | 9.6e+01 | 9.6e+01 | 46 |
fr | 2002_02 | 1jmu:B | 1.4 | 1.6 | -9.751844e-01 | -5.663819e-01 | 0.0e+00 | 1.6e-01 | 9.4e+01 | 3.7 | 3.1e+00 | 4.3e+00 | 608 |
fr | 2002_02 | 1jnr:B | 1.1 | 2.0 | -4.371937e+00 | -2.423271e+00 | 0.0e+00 | 2.0e+00 | 9.3e+01 | 5.2 | 1.1e+01 | 1.9e+01 | 149 |
fr | 2002_02 | 1jr5:A | 1.3 | 2.0 | -2.083547e+00 | -3.323883e+00 | 3.3e+00 | 8.9e+00 | 9.6e+01 | 7.2 | 1.6e+01 | 2.6e+01 | 90 |
fr | 2002_02 | 1jrm:A | 0.8 | 1.2 | -5.869406e+00 | -4.771463e+00 | 1.9e+00 | 6.7e+00 | 1.0e+02 | 5.6 | 1.6e+01 | 2.3e+01 | 104 |
fr | 2002_02 | 1jsb:A | 0.8 | 2.0 | -8.725651e+00 | -8.721634e+00 | 0.0e+00 | 2.9e+00 | 1.0e+02 | 4.8 | 3.1e+01 | 4.1e+01 | 70 |
fr | 2002_02 | 1jw3:A | 1.6 | 1.2 | -1.393935e-01 | -8.239780e-02 | 2.9e+00 | 7.1e+00 | 9.1e+01 | 3.1 | 2.2e+01 | 2.8e+01 | 140 |
fr | 2002_02 | 1jxh:A | 1.4 | 1.2 | -1.903088e+00 | -3.502043e-02 | 8.1e-01 | 8.1e-01 | 8.8e+01 | 7.5 | 8.9e+00 | 1.1e+01 | 248 |
fr | 2002_02 | 1k0s:A | 1.3 | 1.2 | -4.074538e+00 | -3.762082e+00 | 3.3e+00 | 5.3e+00 | 9.4e+01 | 4.2 | 1.6e+01 | 2.1e+01 | 151 |
fr | 2002_02 | 1k1e:K | 2.1 | 2.0 | -3.409065e+00 | 6.900173e-01 | 1.7e+00 | 5.8e+00 | 9.4e+01 | 4.5 | 2.0e+01 | 2.8e+01 | 173 |
fr | 2002_02 | 1k28:D | 1.2 | 0 | -1.803779e+00 | -8.934043e-01 | 0.0e+00 | 1.1e+00 | 9.7e+01 | 4.3 | 0.0e+00 | 0.0e+00 | 349 |
fr | 2002_02 | 1k5h:B | 1.7 | 0.7 | -9.136202e-01 | -4.337892e-01 | 5.1e-01 | 2.0e+00 | 9.7e+01 | 2.8 | 9.2e+00 | 1.2e+01 | 391 |
fr | 2002_02 | 1khc:A | 1.4 | 1.2 | -4.771875e+00 | 4.755319e+00 | 0.0e+00 | 2.2e+00 | 9.3e+01 | 6.0 | 5.1e+00 | 1.2e+01 | 137 |
fr | 2002_02 | 1khg:A | 31.3 | 0.7 | -1.054871e+00 | 1.055207e+01 | 2.1e+01 | 3.1e+01 | 8.1e+01 | 3.7 | 5.0e+00 | 1.1e+01 | 603 |
fr | 2002_02 | 1kps:B | 1.1 | 1.6 | -4.045033e+00 | -2.887551e+00 | 1.3e+00 | 4.5e+00 | 9.7e+01 | 5.5 | 1.4e+01 | 1.9e+01 | 156 |
fr | 2002_02 | 1kq4:D | 1.8 | 0 | -3.017341e+00 | 9.804571e-03 | 4.9e-01 | 2.4e+00 | 9.0e+01 | 5.5 | 0.0e+00 | 0.0e+00 | 206 |
fr | 2002_02 | 1ktz:B | 3.4 | 3.3 | -5.840143e+00 | 1.737809e+00 | 3.8e+00 | 1.6e+01 | 9.6e+01 | 3.8 | 2.2e+01 | 3.3e+01 | 106 |
fr | 2002_02 | THIS_month:psum | 3.0 | 1.5 | 12.1 | 8.7 | 5.9 | 11.0 | 90.0 | 4.6 | 19.8 | 24.6 | 185.7 |
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
psum | percentage over all proteins |
sig | standard deviation |
errsig | significant difference (to distinguish between two methods) |
type | prediction type |
date | date when added [yyyy_mm_dd] |