| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2002_04 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2002_04 | THIS_month:psum | 2.3 | 2.0 | 13.3 | 4.0 | 8.6 | 14.4 | 37.8 | 1 | 17.7 | 21.4 | 220 |
| fr | 2002_04 | 1gqw:A | 3.0 | 0.7 | -5.898708e+00 | -1.335668e+00 | 7.2e-01 | 1.4e+00 | 3.6e+01 | 1 | 4.7e+00 | 8.3e+00 | 277 |
| fr | 2002_04 | 1icz:A | 2.6 | 2.8 | -6.782463e+00 | -1.571373e+00 | 4.0e+00 | 6.8e+00 | 3.6e+01 | 1 | 9.2e+00 | 1.5e+01 | 249 |
| fr | 2002_04 | 1k1v:A | 1.8 | 2.8 | -1.908750e+01 | 9.967164e+00 | 2.2e+01 | 4.9e+01 | 7.8e+01 | 1 | 6.3e+01 | 6.8e+01 | 41 |
| fr | 2002_04 | 1k26:B | 3.3 | 2.8 | 1.296084e+01 | 1.880470e-01 | 1.5e+01 | 1.7e+01 | 3.7e+01 | 1 | 1.6e+01 | 2.1e+01 | 147 |
| fr | 2002_04 | 1k2e:A | 3.3 | 2.8 | 1.370819e+01 | 2.057203e+00 | 1.4e+01 | 1.6e+01 | 3.6e+01 | 1 | 1.6e+01 | 2.0e+01 | 152 |
| fr | 2002_04 | 1l7k:A | 2.4 | 1.6 | -8.725681e+00 | -6.562846e-01 | 1.2e+00 | 2.4e+00 | 2.1e+01 | 1 | 6.2e+00 | 8.6e+00 | 339 |
| fr | 2002_04 | 1l8c:B | 1.0 | 1.6 | -2.776364e+01 | -1.196295e+01 | 1.2e+01 | 2.2e+01 | 4.3e+01 | 1 | 2.4e+01 | 2.7e+01 | 51 |
| fr | 2002_04 | 1la2:A | 1.4 | 1.6 | -7.359028e+00 | -3.441145e-01 | 4.0e-01 | 1.2e+00 | 1.6e+01 | 1 | 3.2e+00 | 4.0e+00 | 504 |
| fr | 2002_04 | THIS_month:psum | 2.3 | 2.0 | 13.3 | 4.0 | 8.6 | 14.4 | 37.8 | 1 | 17.7 | 21.4 | 220 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |