METHOD about: | ../../../doc/explain_methods.html#PX_about_loopp |
METHOD url: | LOOPP |
TYPE : | fr |
NPROT : | 483 |
NWEEKS : | 184 |
NOTE 1 : | here ALL results obtained for LOOPP in month 2002_07 are given, i.e. NOT those for a common subset! |
NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
fr | 2002_07 | THIS_month:psum | 2.2 | 1.5 | 5.9 | 3.5 | 2.0 | 5.4 | 90.2 | 4.8 | 14.2 | 18.1 | 176.1 |
fr | 2002_07 | 1ifr:A | 2.2 | 1.2 | -6.169697e+00 | 9.354938e-01 | 1.8e+00 | 8.0e+00 | 8.8e+01 | 4.4 | 1.8e+01 | 2.3e+01 | 113 |
fr | 2002_07 | 1ify:A | 2.8 | 0 | -1.454286e+01 | -7.484268e+00 | 1.2e+01 | 2.4e+01 | 8.6e+01 | 3.5 | 0.0e+00 | 0.0e+00 | 49 |
fr | 2002_07 | 1iqo:A | 1.5 | 0 | -8.246995e+00 | -6.096408e+00 | 2.3e+00 | 6.8e+00 | 8.4e+01 | 3.3 | 0.0e+00 | 0.0e+00 | 88 |
fr | 2002_07 | 1iu1:A | 1.4 | 1.2 | -5.132773e+00 | 4.818869e-01 | 0.0e+00 | 8.3e-01 | 9.9e+01 | 6.2 | 1.8e+01 | 2.7e+01 | 120 |
fr | 2002_07 | 1j58:A | 0.9 | 1.6 | -1.266332e+00 | -7.306067e-01 | 2.7e-01 | 5.5e-01 | 9.7e+01 | 7.6 | 4.9e+00 | 6.0e+00 | 364 |
fr | 2002_07 | 1j5s:B | 3.9 | 3.5 | -4.210391e-01 | 9.223762e-01 | 1.8e+00 | 4.0e+00 | 9.7e+01 | 6.1 | 1.7e+01 | 2.2e+01 | 450 |
fr | 2002_07 | 1j5u:A | 1.9 | 0 | -4.794017e+00 | -1.460394e+00 | 0.0e+00 | 1.6e+00 | 1.0e+02 | 4.8 | 0.0e+00 | 0.0e+00 | 125 |
fr | 2002_07 | 1j5w:A | 1.1 | 0 | -2.283101e+00 | -1.079431e+00 | 0.0e+00 | 7.4e-01 | 9.9e+01 | 4.4 | 0.0e+00 | 0.0e+00 | 270 |
fr | 2002_07 | 1j5y:A | 2.3 | 2.0 | -4.481627e+00 | 3.251178e+00 | 0.0e+00 | 6.0e-01 | 8.1e+01 | 5.3 | 1.4e+01 | 2.0e+01 | 167 |
fr | 2002_07 | 1jkv:A | 1.3 | 2.6 | 2.153053e+00 | 5.848808e-01 | 0.0e+00 | 1.5e+00 | 6.8e+01 | 3.0 | 1.1e+01 | 1.6e+01 | 266 |
fr | 2002_07 | 1jm1:A | 1.3 | 2.3 | -3.080917e+00 | -2.352102e+00 | 1.5e+00 | 2.0e+00 | 9.8e+01 | 4.5 | 1.8e+01 | 2.3e+01 | 202 |
fr | 2002_07 | 1jmm:A | 2.0 | 2.0 | -3.023762e+00 | -1.397543e+00 | 8.1e-01 | 3.5e+00 | 5.5e+01 | 3.2 | 6.5e+00 | 8.1e+00 | 370 |
fr | 2002_07 | 1k0h:A | 1.2 | 1.2 | -7.359036e+00 | -5.158896e+00 | 0.0e+00 | 8.5e-01 | 7.1e+01 | 3.2 | 1.5e+01 | 1.9e+01 | 117 |
fr | 2002_07 | 1kam:A | 2.1 | 3.3 | -2.222993e+00 | -4.406588e-02 | 0.0e+00 | 1.1e+00 | 9.8e+01 | 5.5 | 1.8e+01 | 2.4e+01 | 180 |
fr | 2002_07 | 1key:D | 5.8 | 2.3 | 4.645566e-01 | 3.037475e+00 | 9.5e-01 | 9.5e-01 | 1.0e+02 | 5.5 | 8.5e+00 | 9.0e+00 | 211 |
fr | 2002_07 | 1kkx:A | 3.6 | 2.0 | -6.409609e+00 | -5.912928e-01 | 9.8e-01 | 3.9e+00 | 9.0e+01 | 5.6 | 1.8e+01 | 2.0e+01 | 102 |
fr | 2002_07 | 1kmz:A | 1.3 | 2.0 | -5.162787e+00 | -4.036148e+00 | 0.0e+00 | 4.0e+00 | 9.3e+01 | 4.7 | 1.9e+01 | 2.6e+01 | 125 |
fr | 2002_07 | 1kn6:A | 1.5 | 2.0 | -8.468663e+00 | -4.821354e+00 | 0.0e+00 | 6.8e+00 | 9.9e+01 | 5.4 | 1.9e+01 | 2.3e+01 | 73 |
fr | 2002_07 | 1kq2:A | 1.0 | 1.2 | -1.011258e+01 | -6.613200e+00 | 3.3e+00 | 6.7e+00 | 9.8e+01 | 5.0 | 3.2e+01 | 4.2e+01 | 60 |
fr | 2002_07 | 1kzq:A | 1.0 | 0 | -3.212469e+00 | -2.099967e+00 | 7.9e-01 | 2.8e+00 | 7.5e+01 | 3.1 | 0.0e+00 | 0.0e+00 | 253 |
fr | 2002_07 | 1l3l:A | 0.9 | 0 | -4.426076e+00 | -2.540898e+00 | 0.0e+00 | 8.8e-01 | 6.1e+01 | 3.5 | 0.0e+00 | 0.0e+00 | 228 |
fr | 2002_07 | 1lj2:A | 1.5 | 2.0 | -6.567742e+00 | -3.292231e+00 | 1.9e+00 | 3.8e+00 | 8.8e+01 | 3.8 | 1.6e+01 | 2.3e+01 | 106 |
fr | 2002_07 | 1lm7:A | 1.4 | 1.2 | -2.566387e+00 | -1.330290e+00 | 4.2e-01 | 1.3e+00 | 1.0e+02 | 5.1 | 6.3e+00 | 8.8e+00 | 238 |
fr | 2002_07 | 1lqr:A | 1.4 | 1.6 | -1.796450e+01 | -1.725429e+01 | 0.0e+00 | 1.4e+01 | 9.7e+01 | 5.1 | 2.3e+01 | 4.0e+01 | 35 |
fr | 2002_07 | 1lsh:B | 1.2 | 1.6 | -3.571930e+00 | -3.438324e-01 | 1.1e+00 | 2.9e+00 | 9.8e+01 | 8.5 | 1.8e+01 | 2.3e+01 | 174 |
fr | 2002_07 | 1lsu:A | 1.1 | 1.2 | -4.504048e+00 | -3.820162e+00 | 2.2e+00 | 8.2e+00 | 1.0e+02 | 5.4 | 2.1e+01 | 2.1e+01 | 134 |
fr | 2002_07 | 1lvf:A | 0.7 | 2.0 | -6.045441e+00 | -5.369449e+00 | 9.4e-01 | 2.8e+00 | 9.5e+01 | 4.4 | 1.8e+01 | 2.3e+01 | 106 |
fr | 2002_07 | 1lvo:A | 1.0 | 2.6 | -2.088984e+00 | -9.431457e-01 | 3.3e-01 | 3.3e-01 | 9.5e+01 | 4.6 | 8.4e+00 | 1.1e+01 | 299 |
fr | 2002_07 | 1ly1:A | 15.8 | 3.7 | 1.512949e+01 | 1.570483e+01 | 3.1e+01 | 5.0e+01 | 9.1e+01 | 4.3 | 6.6e+01 | 7.0e+01 | 152 |
fr | 2002_07 | 1m4v:B | 1.3 | 1.6 | -3.136051e+00 | -1.003759e+00 | 5.1e-01 | 2.0e+00 | 9.7e+01 | 5.8 | 1.4e+01 | 1.8e+01 | 197 |
fr | 2002_07 | 1m62:A | 2.1 | 0.7 | -7.102326e+00 | -4.247984e+00 | 0.0e+00 | 2.3e+00 | 9.9e+01 | 5.0 | 1.5e+01 | 1.7e+01 | 87 |
fr | 2002_07 | THIS_month:psum | 2.2 | 1.5 | 5.9 | 3.5 | 2.0 | 5.4 | 90.2 | 4.8 | 14.2 | 18.1 | 176.1 |
fr | 2003_02_24 | psum | 2.6 | 1.7 | 0.8 | 2.2 | 6.3 | 10.3 | 88.7 | 4.7 | 18.6 | 23.3 | 181.1 |
psum | percentage over all proteins |
sig | standard deviation |
errsig | significant difference (to distinguish between two methods) |
type | prediction type |
date | date when added [yyyy_mm_dd] |