| METHOD about: | ../../../doc/explain_methods.html#PX_about_pdbblast |
| METHOD url: | PDB-BLAST |
| TYPE : | fr |
| NPROT : | 330 |
| NWEEKS : | 156 |
| NOTE 1 : | here ALL results obtained for PDB-BLAST in month 2002_10 are given, i.e. NOT those for a common subset! |
| NOTE 2 : | all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure! |
| type | date | Target | -lnP_MMT | Z_CE | Q_LG1 | Q_LG2 | N3.5A_Gbl% | N5A_Gbl% | ModN% | ServScore | N3.5A_ext_CE% | N5A_ext_CE% | TgtN |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| fr | 2002_10 | THIS_month:psum | 2.4 | 2.7 | 15.4 | 4.7 | 9.2 | 13.4 | 46.8 | 1 | 24.1 | 26.4 | 116.5 |
| fr | 2002_10 | 1gxo:A | 1.8 | 2.0 | -1.110545e+01 | -1.471719e+00 | 2.2e+00 | 4.1e+00 | 1.7e+01 | 1 | 6.2e+00 | 8.1e+00 | 320 |
| fr | 2002_10 | 1ivz:A | 3.9 | 2.3 | -9.768103e+00 | 4.166437e+00 | 6.8e+00 | 1.1e+01 | 4.2e+01 | 1 | 1.5e+01 | 2.4e+01 | 132 |
| fr | 2002_10 | 1l6l:3 | 1.9 | 2.6 | -1.650811e+01 | -5.440048e+00 | 6.8e+00 | 1.6e+01 | 5.1e+01 | 1 | 2.3e+01 | 2.6e+01 | 73 |
| fr | 2002_10 | 1l6l:7 | 2.7 | 3.3 | 2.360384e+01 | -9.848130e-01 | 3.1e+01 | 3.3e+01 | 5.3e+01 | 1 | 3.1e+01 | 3.3e+01 | 70 |
| fr | 2002_10 | 1l6l:A | 2.7 | 3.3 | 8.609325e+00 | 5.585763e+00 | 8.1e+00 | 1.5e+01 | 6.1e+01 | 1 | 4.2e+01 | 4.2e+01 | 74 |
| fr | 2002_10 | 1l6l:D | 1.4 | 2.3 | -1.639222e+01 | -7.746661e+00 | 9.5e+00 | 1.5e+01 | 4.9e+01 | 1 | 2.0e+01 | 2.0e+01 | 74 |
| fr | 2002_10 | 1l6l:Q | 2.5 | 3.1 | 1.405491e+01 | 4.483289e+00 | 0.0e+00 | 0.0e+00 | 5.5e+01 | 1 | 3.2e+01 | 3.2e+01 | 73 |
| fr | 2002_10 | THIS_month:psum | 2.4 | 2.7 | 15.4 | 4.7 | 9.2 | 13.4 | 46.8 | 1 | 24.1 | 26.4 | 116.5 |
| fr | 2002_11_20 | psum | 4.3 | 2.4 | 2.7 | 4.6 | 14.5 | 18.8 | 45.2 | 1 | 21.5 | 24.4 | 189.8 |
| psum | percentage over all proteins |
| sig | standard deviation |
| errsig | significant difference (to distinguish between two methods) |
| type | prediction type |
| date | date when added [yyyy_mm_dd] |