EVA: Detailed information for proteins added on: 2001_03_28

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2001_03_28	1eum	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL BINDING PROTEIN	MOLECULE: FERRITIN 1; CHAIN: A, B, C, D, E, F; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	T.J.STILLMAN,P.D.HEMPSTEAD,P.J.ARTYMIUK,S.C.ANDREWS, A.J.HUDSON,A.TREFFRY,J.R.GUEST,P.M.HARRISON
2001_03_28	1f75	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: UNDECAPRENYL PYROPHOSPHATE SYNTHETASE; CHAIN: A, B; EC: 2.5.1.31; ENGINEERED: YES; MUTATION: YES	MICROCOCCUS LUTEUS B-P 26; BACTERIA;	M.FUJIHASHI,Y.-W.ZHANG,Y.HIGUCHI,X.-Y.LI,T.KOYAMA,K.MIKI
2001_03_28	1fw9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	MOLECULE: CHORISMATE LYASE; CHAIN: A; FRAGMENT: COMPLETE ENZYME; EC: 4.-.-.-; MUTATION: YES	ESCHERICHIA COLI; BACTERIA	D.T.GALLAGHER,M.MAYHEW,M.HOLDEN,V.VILKER,A.HOWARD
2001_03_28	1gh5	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ANTIFUNGAL PROTEIN	MOLECULE: ANTIFUNGAL PROTEIN; CHAIN: A; FRAGMENT: AFP1; ENGINEERED: YES	STREPTOMYCES TENDAE; BACTERIA; STRAIN: TU901; GENE: AFP;	R.CAMPOS-OLIVAS,C.BORMANN,I.HOERR,G.JUNG,A.M.GRONENBORN
2001_03_28	1i1r	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CYTOKINE	MOLECULE: INTERLEUKIN-6 RECEPTOR BETA CHAIN; CHAIN: A; FRAGMENT: DOMAINS 1, 2, 3 OF THE GP130 EXTRACELLULAR DOMAIN (RESIDUES 1-303); SYNONYM: GP130; ENGINEERED: YES; OTHER_DETAILS: EXPRESSED IN THE PRESENCE OF INHIBITOR OF N- LINKED GLYCOSYLATION (TUNICAMYCIN); MOLECULE: VIRAL IL-6; CHAIN: B; SYNONYM: FUNCTIONAL INTERLEUKIN-6 HOMOLOG; ENGINEERED: YES; OTHER_DETAILS: NON-GLYCOSYLATED	HOMO SAPIENS; HUMAN; KAPOSI'S SARCOMA HERPES-VIRUS; HUMAN HERPESVIRUS 8;	D.CHOW,X.HE,A.L.SNOW,S.ROSE-JOHN,K.C.GARCIA
2001_03_28	1i7o	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ISOMERASE, LYASE	MOLECULE: 4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL ISOMERASE/DECARBOXYLASE; CHAIN: A, B, C, D; EC: 5.3.3.10, 4.1.1.68; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	J.R.H.TAME,K.NAMBA,E.J.DODSON,D.I.ROPER
2001_03_28	1i9a	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ISOMERASE	MOLECULE: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; CHAIN: A, B; SYNONYM: DIMETHYLALLYL DIPHOSPHATE DELTA ISOMERASE; EC: 5.3.3.2; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	J.B.BONANNO,C.EDO,N.ESWAR,U.PIEPER,M.J.ROMANOWSKI,V.ILYIN, S.E.GERCHMAN,H.KYCIA,F.W.STUDIER,A.SALI,S.K.BURLEY

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field