EVA summary for category sec (2)

Contents

Method	Nprot	Nweek	Detailed results for method
ALL	385	77	method/index.html

APSSP	0	0	method/apssp.html
APSSP2	303	62	method/apssp2.html
JPred	167	29	method/jpred.html
JUFO	84	24	method/jufo.html
PHD	315	63	method/phd.html
PHDpsi	313	63	method/phdpsi.html
PROF_king	313	70	method/prof_king.html
PROFsec	315	63	method/profsec.html
Prospect	235	60	method/prospect.html
PSIpred	311	70	method/psipred.html
PSSP	1	1	method/pssp.html
SABLE	24	7	method/sable.html
SAM-T99sec	267	71	method/samt99_sec.html
SCRATCH (SSpro3)	112	26	method/scratch.html
SSpro1	1	1	method/sspro1.html
SSpro2	257	48	method/sspro2.html

Averages compiled over different subsets

The reason for compiling different averages is that not ALL proteins were predicted by all methods!
Only proteins with no significant sequence identity to previously known PDB proteins are reported, here.
The following subsets are given:
- set 1: 1 proteins and 10 methods (HTML - ASCII)
- set 2: 1 proteins and 8 methods (HTML - ASCII)
- set 3: 1 proteins and 7 methods (HTML - ASCII)
- set 4: 1 proteins and 6 methods (HTML - ASCII)
- set 5: 16 proteins and 5 methods (HTML - ASCII)
- set 6: 16 proteins and 4 methods (HTML - ASCII)
Detail level 2 (this file) as ASCII

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 1			Sorted alphabetically for identical ranks!		MORE SCORES
common 1	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				Prospect	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0
common 1	1	dssp	2	APSSP2	56.4	+/-10.0	45.9	+/-10.0	4.5	+/-10.0	0.10	+/-10.00	1.00	+/-10.00	0.40	+/-10.00	0.22	+/-10.00	100.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 2			Sorted alphabetically for identical ranks!		MORE SCORES
common 2	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0
				SSpro2	79.1	+/-10.0	86.8	+/-10.0	0.0	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.63	+/-10.00	0.63	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 3			Sorted alphabetically for identical ranks!		MORE SCORES
common 3	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROF_king	80.9	+/-10.0	87.0	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 4			Sorted alphabetically for identical ranks!		MORE SCORES
common 4	1	dssp	1	JPred	84.5	+/-10.0	79.1	+/-10.0	0.0	+/-10.0	0.38	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	100.0	+/-10.0
				PHD	75.5	+/-10.0	74.0	+/-10.0	0.9	+/-10.0	0.34	+/-10.00	1.00	+/-10.00	0.68	+/-10.00	0.58	+/-10.00	100.0	+/-10.0
				PHDpsi	82.7	+/-10.0	84.1	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.69	+/-10.00	0.69	+/-10.00	0.0	+/-10.0
				PROFsec	80.9	+/-10.0	88.3	+/-10.0	0.0	+/-10.0	0.40	+/-10.00	1.00	+/-10.00	0.67	+/-10.00	0.67	+/-10.00	0.0	+/-10.0
				PSIpred	70.9	+/-10.0	63.7	+/-10.0	0.0	+/-10.0	0.22	+/-10.00	1.00	+/-10.00	0.53	+/-10.00	0.49	+/-10.00	0.0	+/-10.0
				SAM-T99sec	78.2	+/-10.0	74.7	+/-10.0	0.0	+/-10.0	0.25	+/-10.00	1.00	+/-10.00	0.57	+/-10.00	0.57	+/-10.00	0.0	+/-10.0

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 5			Sorted alphabetically for identical ranks!		MORE SCORES
common 5	16	dssp	1	SAM-T99sec	77.9	+/-1.7	74.4	+/-2.2	2.1	+/-0.7	0.37	+/-0.03	0.71	+/-0.04	0.69	+/-0.06	0.58	+/-0.03	87.5	+/-8.5
common 5	16	dssp	2	PHD	72.6	+/-2.2	69.3	+/-3.4	3.4	+/-1.5	0.32	+/-0.03	0.68	+/-0.06	0.67	+/-0.07	0.49	+/-0.04	87.5	+/-8.5
				PHDpsi	74.1	+/-2.3	70.2	+/-3.5	2.7	+/-1.4	0.33	+/-0.03	0.69	+/-0.05	0.68	+/-0.06	0.51	+/-0.04	87.5	+/-8.5
				PROFsec	75.2	+/-2.6	71.6	+/-3.6	3.2	+/-1.2	0.34	+/-0.04	0.66	+/-0.06	0.69	+/-0.06	0.56	+/-0.04	87.5	+/-8.5
				PSIpred	74.0	+/-2.2	69.3	+/-2.7	3.2	+/-1.0	0.33	+/-0.04	0.68	+/-0.05	0.71	+/-0.06	0.53	+/-0.03	81.2	+/-10.1

subset	nprot	sots	rank	method	Q3	ERRsigQ3	sov	ERRsigsov	BAD	ERRsigBAD	info	ERRsiginfo	corrH	ERRsigcorrH	corrE	ERRsigcorrE	corrL	ERRsigcorrL	class	ERRsigclass
Set 6			Sorted alphabetically for identical ranks!		MORE SCORES
common 6	16	dssp	1	PHD	72.6	+/-2.2	69.3	+/-3.4	3.4	+/-1.5	0.32	+/-0.03	0.68	+/-0.06	0.67	+/-0.07	0.49	+/-0.04	87.5	+/-8.5
				PHDpsi	74.1	+/-2.3	70.2	+/-3.5	2.7	+/-1.4	0.33	+/-0.03	0.69	+/-0.05	0.68	+/-0.06	0.51	+/-0.04	87.5	+/-8.5
				PROFsec	75.2	+/-2.6	71.6	+/-3.6	3.2	+/-1.2	0.34	+/-0.04	0.66	+/-0.06	0.69	+/-0.06	0.56	+/-0.04	87.5	+/-8.5
				PSIpred	74.0	+/-2.2	69.3	+/-2.7	3.2	+/-1.0	0.33	+/-0.04	0.68	+/-0.05	0.71	+/-0.06	0.53	+/-0.03	81.2	+/-10.1