EVA: Detailed information for proteins added on: 2001_12_19

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2001_12_19	1geh	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE;	2 ORGANISM_SCIENTIFIC: THERMOCOCCUS KODAKARAENSIS;	K.KITANO, N.MAEDA, T.FUKUI, H.ATOMI, T.IMANAKA, K.MIKI
2001_12_19	1gjz	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	UBIQUITIN	2 MOLECULE: UBIQUITIN;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	D.BOLTON, P.A.EVANS, K.STOTT, R.W.BROADHURST
2001_12_19	1gkk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ENDO-1,4-BETA-XYLANASE Y;	2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM;	J.A.M.PRATES, N.TARBOURIECH, S.J.CHARNOCK, C.M.G.A.FONTES,
2001_12_19	1gkl	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ENDO-1,4-BETA-XYLANASE Y;	2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM;	J.A.M.PRATES, N.TARBOURIECH, S.J.CHARNOCK, C.M.G.A.FONTES,
2001_12_19	1gl8	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: THIOREDOXIN;	2 ORGANISM_SCIENTIFIC: SPINACIA OLERACEA;	J.L.NEIRA, C.GONZALEZ, C.TOIRON, G.DE-PRAT-GAY, M.RICO
2001_12_19	1h6i	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	MEMBRANE PROTEIN	2 MOLECULE: AQUAPORIN-1;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	B.L.DE GROOT, A.ENGEL, H.GRUBMULLER
2001_12_19	1h6w	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	2 MOLECULE: BACTERIOPHAGE T4 SHORT TAIL FIBRE;	2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE T4;	M.J.VAN RAAIJ, G.SCHOEHN, M.R.BURDA, S.MILLER
2001_12_19	1h7l	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN	2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS;	N.TARBOURIECH, S.J.CHARNOCK, G.J.DAVIES
2001_12_19	1h7q	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN	2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS;	N.TARBOURIECH, S.J.CHARNOCK, G.J.DAVIES
2001_12_19	1hqk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE;	2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS;	X.ZHANG, W.MEINING, M.FISCHER, A.BACHER, R.LADENSTEIN
2001_12_19	1i3b	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ANTIFREEZE PROTEIN	2 MOLECULE: ICE RECRYSTALLISATION INHIBITION PROTEIN;	2 ORGANISM_SCIENTIFIC: LOLIUM PERENNE;	M.J.KUIPER, P.L.DAVIES, V.K.WALKER
2001_12_19	1i4s	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: RIBONUCLEASE III;	2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS;	J.BLASZCZYK, X.JI
2001_12_19	1ik6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: PYRUVATE DEHYDROGENASE;	2 ORGANISM_SCIENTIFIC: PYROBACULUM AEROPHILUM;	G.KLEIGER, J.PERRY, D.EISENBERG
2001_12_19	1j4r	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ISOMERASE	2 MOLECULE: FK506-BINDING PROTEIN;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.SHERIFF
2001_12_19	1j4x	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: DUAL SPECIFICITY PROTEIN PHOSPHATASE 3;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	M.A.SCHUMACHER, J.L.TODD, K.G.TANNER, J.M.DENU
2001_12_19	1j8e	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	2 MOLECULE: LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	M.SIMONOVIC, K.DOLMER, W.HUANG, D.K.STRICKLAND, K.VOLZ,
2001_12_19	1jfj	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL BINDING PROTEIN	2 MOLECULE: CALCIUM-BINDING PROTEIN;	2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA;	H.S.ATREYA, S.C.SAHU, A.BHATTACHARYA, K.V.R.CHARY, G.GOVIL
2001_12_19	1jfk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL BINDING PROTEIN	2 MOLECULE: CALCIUM-BINDING PROTEIN;	2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA;	H.S.ATREYA, S.C.SAHU, A.BHATTACHARYA, K.V.R.CHARY, G.GOVIL
2001_12_19	1jfz	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: RIBONUCLEASE III;	2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS;	J.BLASZCZYK, X.JI
2001_12_19	1joj	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SUGAR BINDING PROTEIN	2 MOLECULE: CONCANAVALIN A;	2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS;	D.JAIN, K.KAUR, D.M.SALUNKE
2001_12_19	1jph	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: UROPORPHYRINOGEN DECARBOXYLASE;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	J.D.PHILLIPS, T.L.PARKER, H.L.SCHUBERT, F.G.WHITBY, C.P.HILL,
2001_12_19	1jpi	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: UROPORPHYRINOGEN DECARBOXYLASE;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	J.D.PHILLIPS, T.L.PARKER, H.L.SCHUBERT, F.G.WHITBY, C.P.HILL,
2001_12_19	1jpk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: UROPORPHYRINOGEN DECARBOXYLASE;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	J.D.PHILLIPS, T.L.PARKER, H.L.SCHUBERT, F.G.WHITBY, C.P.HILL,
2001_12_19	1jqz	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	2 MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.R.BRYCH, S.I.BLABER, T.M.LOGAN, M.BLABER
2001_12_19	1jt3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	2 MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.R.BRYCH, S.I.BLABER, T.M.LOGAN, M.BLABER
2001_12_19	1jt4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	2 MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.R.BRYCH, S.I.BLABER, T.M.LOGAN, M.BLABER
2001_12_19	1jt5	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	2 MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.R.BRYCH, S.I.BLABER, T.M.LOGAN, M.BLABER
2001_12_19	1jt7	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	2 MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.R.BRYCH, S.I.BLABER, T.M.LOGAN, M.BLABER
2001_12_19	1jtc	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	2 MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.R.BRYCH, S.I.BLABER, T.M.LOGAN, M.BLABER
2001_12_19	1jwn	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: GLOBIN I - ARK SHELL;	2 ORGANISM_SCIENTIFIC: SCAPHARCA INAEQUVALVIS;	J.E.KNAPP, Q.H.GIBSON, L.CUSHING, W.E.ROYER JR.
2001_12_19	1jxg	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	PHOTOSYNTHESIS	2 MOLECULE: PLASTOCYANIN A;	2 ORGANISM_SCIENTIFIC: POPULUS NIGRA;	M.MILANI, L.ANDOLFI, S.CANNISTRARO, M.P.VERBEET, M.BOLOGNESI
2001_12_19	1jzk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: GLOBIN I - ARK SHELL;	2 ORGANISM_SCIENTIFIC: SCAPHARCA INAEQUIVALVIS;	J.E.KNAPP, Q.H.GIBSON, L.CUSHING, W.E.ROYER JR.
2001_12_19	1jzl	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: GLOBIN I - ARK SHELL;	2 ORGANISM_SCIENTIFIC: SCAPHARCA INAEQUIVALVIS;	J.E.KNAPP, Q.H.GIBSON, L.CUSHING, W.E.ROYER JR.
2001_12_19	1jzm	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: GLOBIN I - ARK SHELL;	2 ORGANISM_SCIENTIFIC: SCAPHARCA INAEQUIVALVIS;	J.E.KNAPP, Q.H.GIBSON, L.CUSHING, W.E.ROYER JR.
2001_12_19	1k0v	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL TRANSPORT	2 MOLECULE: COPZ;	2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS;	L.BANCI, I.BERTINI, R.DEL CONTE, J.MARKEY, F.J.RUIZ-DUENAS
2001_12_19	1k3c	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE;	2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;	A.M.SUDOM, L.PRASAD, H.GOLDIE, L.T.J.DELBAERE
2001_12_19	1k3d	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE;	2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;	A.M.SUDOM, L.PRASAD, H.GOLDIE, L.T.J.DELBAERE
2001_12_19	1k6u	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE INHIBITOR	2 MOLECULE: PANCREATIC TRYPSIN INHIBITOR;	2 SYNTHETIC: YES;	I.BOTOS, Z.WU, W.LU, A.WLODAWER
2001_12_19	1k7b	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	MEMBRANE PROTEIN	2 MOLECULE: SUBGROUP A ROUS SARCOMA VIRUS RECEPTOR PG800 AND	2 ORGANISM_SCIENTIFIC: COTURNIX COTURNIX;	M.TONELLI, R.J.PETERS, T.L.JAMES, D.A.AGARD
2001_12_19	1k8d	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	IMMUNE SYSTEM	2 MOLECULE: QA-2 ANTIGEN;	2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;	X.HE, P.TABACZEWSKI, J.HO, I.STROYNOWSKI, K.C.GARCIA
2001_12_19	1kcz	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: BETA-METHYLASPARTASE;	2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM TETANOMORPHUM;	M.ASUNCION, W.BLANKENFELDT, J.N.BARLOW, D.GANI, J.H.NAISMITH
2001_12_19	1kd0	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: BETA-METHYLASPARTASE;	2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM TETANOMORPHUM;	M.ASUNCION, W.BLANKENFELDT, J.N.BARLOW, D.GANI, J.H.NAISMITH
2001_12_19	1kf2	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: PANCREATIC RIBONUCLEASE;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	R.BERISIO, F.SICA, V.S.LAMZIN, K.S.WILSON, A.ZAGARI, M.MAZZARELLA
2001_12_19	1kf3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: PANCREATIC RIBONUCLEASE;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	R.BERISIO, F.SICA, V.S.LAMZIN, K.S.WILSON, A.ZAGARI, L.MAZZARELLA
2001_12_19	1kf4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: PANCREATIC RIBONUCLEASE;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	R.BERISIO, F.SICA, V.S.LAMZIN, K.S.WILSON, A.ZAGARI, L.MAZZARELLA
2001_12_19	1kf5	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: PANCREATIC RIBONUCLEASE;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	R.BERISIO, F.SICA, V.S.LAMZIN, K.S.WILSON, A.ZAGARI, L.MAZZARELLA
2001_12_19	1kf7	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: PANCREATIC RIBONUCLEASE;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	R.BERISIO, F.SICA, V.S.LAMZIN, K.S.WILSON, A.ZAGARI, L.MAZZARELLA
2001_12_19	1kf8	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: PANCREATIC RIBONUCLEASE;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	R.BERISIO, F.SICA, V.S.LAMZIN, K.S.WILSON, A.ZAGARI, L.MAZZARELLA
2001_12_19	1kgd	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	PROTEIN BINDING	2 MOLECULE: PERIPHERAL PLASMA MEMBRANE CASK;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	Y.LI, O.SPANGENBERG, I.PAARMANN, M.KONRAD, A.LAVIE
2001_12_19	1kju	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM	2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS;	C.XU, W.J.RICE, W.HE, D.L.STOKES
2001_12_19	1kkd	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	2 MOLECULE: SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM	2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;	R.WISSMANN, W.BILDL, H.NEUMANN, A.F.RIVARD, N.KLOECKER, D.WEITZ,

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field