EVA: Detailed information for proteins added on: 2002_01_16

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	DSSP header	DSSP compnd	DSSP source	DSSP author
2002_01_16	1f1s	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: HYALURONATE LYASE;	2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE;	S.LI, M.J.JEDRZEJAS
2002_01_16	1fh4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSLATION	2 MOLECULE: INITIATION FACTOR 5A;		A.M.FACCHIANO
2002_01_16	1fj0	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ELECTRON TRANSPORT	2 MOLECULE: CYTOCHROME C2;	2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS;	S.GEREMIA
2002_01_16	1hlv	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	DNA BINDING PROTEIN/DNA	2 MOLECULE: MAJOR CENTROMERE AUTOANTIGEN B;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	Y.TANAKA, O.NUREKI, H.KURUMIZAKA, S.FUKAI, S.KAWAGUCHI, M.IKUTA,
2002_01_16	1hql	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SUGAR BINDING PROTEIN	2 MOLECULE: LECTIN;	2 ORGANISM_SCIENTIFIC: GRIFFONIA SIMPLICIFOLIA;	W.TEMPEL, L.A.LIPSCOMB, J.P.ROSE, R.J.WOODS
2002_01_16	1hww	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ALPHA-MANNOSIDASE II;	2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;	J.M.H.VAN DEN ELSEN, D.A.KUNTZ, D.R.ROSE
2002_01_16	1hx7	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	DNA BINDING PROTEIN	2 MOLECULE: TRANSPOSON GAMMA-DELTA RESOLVASE;	2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI;	B.PAN, G.P.MULLEN
2002_01_16	1hxk	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ALPHA-MANNOSIDASE II;	2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER;	J.M.H.VAN DEN ELSEN, D.A.KUNTZ, D.R.ROSE
2002_01_16	1hxs	1-2-3-4	pdb_ascii	dssp	fasta	psi_ascii	psi_html	VIRUS/VIRAL PROTEIN	2 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP1;	2 ORGANISM_SCIENTIFIC: POLIOVIRUS TYPE I;	S.T.MILLER,J.M.HOGLE,D.J.FILMAN
2002_01_16	1i8q	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: HYALURONATE LYASE;	2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS AGALACTIAE;	S.LI, M.J.JEDRZEJAS
2002_01_16	1iiu	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSPORT PROTEIN	2 MOLECULE: PLASMA RETINOL-BINDING PROTEIN;	2 ORGANISM_SCIENTIFIC: GALLUS GALLUS;	G.ZANOTTI, V.CALDERONE, R.BERNI
2002_01_16	1il3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: RICIN A CHAIN;	2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS;	D.J.MILLER, K.RAVIKUMAR, H.SHEN, J.-K.SUH, S.M.KERWIN,
2002_01_16	1il4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: RICIN A CHAIN;	2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS;	D.J.MILLER, K.RAVIKUMAR, H.SHEN, J.-K.SUH, S.M.KERWIN,
2002_01_16	1il5	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: RICIN A CHAIN;	2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS;	D.J.MILLER, K.RAVIKUMAR, H.SHEN, J.-K.SUH, S.M.KERWIN,
2002_01_16	1il9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: RICIN A CHAIN;	2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS;	D.J.MILLER, K.RAVIKUMAR, H.SHEN, J.-K.SUH, S.M.KERWIN,
2002_01_16	1jcx	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE;	2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS;	J.WANG, H.S.DUEWEL, R.W.WOODARD, D.L.GATTI
2002_01_16	1jcy	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE;	2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS;	J.WANG, H.S.DUEWEL, R.W.WOODARD, D.L.GATTI
2002_01_16	1jlr	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: URACIL PHOSPHORIBOSYLTRANSFERASE;	2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII;	M.A.SCHUMACHER, C.J.BASHOR, K.OTSU, S.ZU, R.PARRY, B.ULMMAN,
2002_01_16	1jls	A-B-C	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: URACIL PHOSPHORIBOSYTRANSFERASE;	2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII;	M.A.SCHUMACHER, C.J.BASHOR, K.OTSU, S.ZU, R.PARRY, B.ULLMAN,
2002_01_16	1jm0	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	DE NOVO PROTEIN	2 MOLECULE: FOUR-HELIX BUNDLE MODEL;	2 SYNTHETIC: YES;	L.DI COSTANZO, S.GEREMIA
2002_01_16	1jmb	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	DE NOVO PROTEIN	2 MOLECULE: FOUR-HELIX BUNDLE MODEL;	2 SYNTHETIC: YES;	L.DI COSTANZO, S.GEREMIA
2002_01_16	1jmx	A-B-G	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: AMINE DEHYDROGENASE;	2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA;	A.SATOH, I.MIYAHARA, K.HIROTSU
2002_01_16	1jmz	A-B-G	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: AMINE DEHYDROGENASE;	2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA;	A.SATOH, I.MIYAHARA, K.HIROTSU
2002_01_16	1jp6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: MYOGLOBIN;	2 ORGANISM_SCIENTIFIC: PHYSETER CATODON;	P.URAYAMA, S.M.GRUNER, G.N.PHILLIPS JR.
2002_01_16	1jp8	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: MYOGLOBIN;	2 ORGANISM_SCIENTIFIC: PHYSETER CATODON;	P.URAYAMA, S.M.GRUNER, G.N.PHILLIPS JR.
2002_01_16	1jp9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: MYOGLOBIN;	2 ORGANISM_SCIENTIFIC: PHYSETER CATODON;	P.URAYAMA, S.M.GRUNER, G.N.PHILLIPS JR.
2002_01_16	1jpb	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXYGEN STORAGE/TRANSPORT	2 MOLECULE: MYOGLOBIN;	2 ORGANISM_SCIENTIFIC: PHYSETER CATODON;	P.URAYAMA, S.M.GRUNER, G.N.PHILLIPS JR.
2002_01_16	1jpp	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CELL ADHESION	2 MOLECULE: BETA-CATENIN;	2 ORGANISM_SCIENTIFIC: MUS MUSCULUS;	K.E.SPINK, S.G.FRIDMAN, W.I.WEIS
2002_01_16	1jro	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: XANTHINE DEHYDROGENASE;	2 ORGANISM_SCIENTIFIC: RHODOBACTER CAPSULATUS;	J.J.TRUGLIO, K.THEIS, S.LEIMKUHLER, R.RAPPA, K.V.RAJAGOPALAN,
2002_01_16	1jrp	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: XANTHINE DEHYDROGENASE;	2 ORGANISM_SCIENTIFIC: RHODOBACTER CAPSULATUS;	J.J.TRUGLIO, K.THEIS, S.LEIMKUHLER, R.RAPPA, K.V.RAJAGOPALAN,
2002_01_16	1jsc	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	2 MOLECULE: ACETOHYDROXY-ACID SYNTHASE;	2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;	S.S.PANG, R.G.DUGGLEBY, L.W.GUDDAT
2002_01_16	1jxm	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	2 MOLECULE: POSTSYNAPTIC DENSITY PROTEIN;	2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;	G.A.TAVARES, E.H.PANEPUCCI, A.T.BRUNGER
2002_01_16	1jxo	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	STRUCTURAL PROTEIN	2 MOLECULE: POSTSYNAPTIC DENSITY PROTEIN;	2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;	G.A.TAVARES, E.H.PANEPUCCI, A.T.BRUNGER
2002_01_16	1kbo	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: NAD(P)H DEHYDROGENASE [QUINONE] 1;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	M.FAIG, M.A.BIANCHET, L.M.AMZEL
2002_01_16	1kbq	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	2 MOLECULE: NAD(P)H DEHYDROGENASE [QUINONE] 1;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	M.FAIG, M.A.BIANCHET, L.M.AMZEL
2002_01_16	1kck	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: CYCLODEXTRIN GLYCOSYLTRANSFERASE;	2 ORGANISM_SCIENTIFIC: BACILLUS CIRCULANS;	H.J.ROZEBOOM, J.C.M.UITDEHAAG, B.W.DIJKSTRA
2002_01_16	1kcl	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: CYCLODEXTRIN GLYCOSYLTRANSFERASE;	2 ORGANISM_SCIENTIFIC: BACILLUS CIRCULANS;	H.J.ROZEBOOM, J.C.M.UITDEHAAG, B.W.DIJKSTRA
2002_01_16	1kfi	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ISOMERASE	2 MOLECULE: PHOSPHOGLUCOMUTASE 1;	2 ORGANISM_SCIENTIFIC: PARAMECIUM TETRAURELIA;	S.MUELLER, K.DIEDERICHS, J.BREED, R.KISSMEHL, K.HAUSER,
2002_01_16	1kfq	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ISOMERASE	2 MOLECULE: PHOSPHOGLUCOMUTASE 1;	2 ORGANISM_SCIENTIFIC: PARAMECIUM TETRAURELIA;	S.MUELLER, K.DIEDERICHS, J.BREED, R.KISSMEHL, K.HAUSER,
2002_01_16	1kgu	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ALPHA-AMYLASE, PANCREATIC;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.NUMAO, R.MAURUS, G.SIDHU, Y.WANG, C.M.OVERALL, G.D.BRAYER,
2002_01_16	1kgw	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ALPHA-AMYLASE, PANCREATIC;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.NUMAO, R.MAURUS, G.SIDHU, Y.WANG, C.M.OVERALL, G.D.BRAYER,
2002_01_16	1kgx	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	2 MOLECULE: ALPHA-AMYLASE, PANCREATIC;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.NUMAO, R.MAURUS, G.SIDHU, Y.WANG, C.M.OVERALL, G.D.BRAYER,
2002_01_16	1khv	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: RNA-DIRECTED RNA POLYMERASE;	2 ORGANISM_SCIENTIFIC: RABBIT HEMORRHAGIC DISEASE VIRUS;	K.K.NG, M.M.CHERNEY, A.L.VAZQUEZ, A.MACHIN, J.M.ALONSO, F.PARRA,
2002_01_16	1khw	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: RNA-DIRECTED RNA POLYMERASE;	2 ORGANISM_SCIENTIFIC: RABBIT HEMORRHAGIC DISEASE VIRUS;	K.K.NG, M.M.CHERNEY, A.L.VAZQUEZ, A.MACHIN, J.M.ALONSO, F.PARRA,
2002_01_16	1kmc	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	APOPTOSIS/HYDROLASE	2 MOLECULE: CASPASE-7;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	S.J.RIEDL, G.S.SALVESEN, W.BODE
2002_01_16	1kot	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSPORT PROTEIN	2 MOLECULE: GABARAP;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	T.STANGLER, C.LUGE, L.M.MAYR, D.WILLBOLD
2002_01_16	1kp9	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1;	2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;	C.-C.HUANG, C.V.SMITH, W.R.JACOBS JR., M.S.GLICKMAN,
2002_01_16	1kpg	A-B-D	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1;	2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;	C.-C.HUANG, C.V.SMITH, W.R.JACOBS JR., M.S.GLICKMAN,
2002_01_16	1kph	A-B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 1;	2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;	C.-C.HUANG, C.V.SMITH, W.R.JACOBS JR., M.S.GLICKMAN,
2002_01_16	1kpi	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	2 MOLECULE: CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 2;	2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS;	C.-C.HUANG, C.V.SMITH, W.R.JACOBS JR., M.S.GLICKMAN,
2002_01_16	1kpn	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	MEMBRANE PROTEIN	2 MOLECULE: BLUE CONE PIGMENT;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	R.E.STENKAMP, S.FILIPEK, C.A.G.G.DRIESSEN, D.C.TELLER,
2002_01_16	1kpw	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	MEMBRANE PROTEIN	2 MOLECULE: GREEN CONE PIGMENT;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	R.E.STENKAMP, S.FILIPEK, C.A.G.G.DRIESSEN, D.C.TELLER,
2002_01_16	1kpx	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	MEMBRANE PROTEIN	2 MOLECULE: RED CONE PIGMENT;	2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;	R.E.STENKAMP, S.FILIPEK, C.A.G.G.DRIESSEN, D.C.TELLER,
2002_01_16	1kq5	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	2 MOLECULE: ADENYLYL CYCLASE-ASSOCIATED PROTEIN;	2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;	A.A.FEDOROV, T.DODATKO, D.A.ROSWARSKI, S.C.ALMO
2002_01_16	1kqv	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	METAL BINDING PROTEIN	2 MOLECULE: VITAMIN D-DEPENDENT CALCIUM-BINDING PROTEIN;	2 ORGANISM_SCIENTIFIC: BOS TAURUS;	I.BERTINI, A.DONAIRE, B.JIMENEZ, C.LUCHINAT, G.PARIGI,

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
DSSP header	DSSP 'HEADER' field
DSSP compnd	DSSP 'COMPND' field
DSSP source	DSSP 'SOURCE' field
DSSP author	DSSP 'AUTHOR' field