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EVA sec results for: PROF_king month: 2000_11

METHOD about:	../../../doc/explain_methods.html#PX_about_prof_king
METHOD url:	PROF_king
TYPE :	sec
NPROT :	1276
NWEEKS :	97
NOTE 1 :	here ALL results obtained for PROF_king in month 2000_11 are given, i.e. NOT those for a common subset!
NOTE 2 :	all proteins evaluated had no SIGNIFICANT sequence identity to any protein of previously known structure!

Averages over all proteins month 2000_11 1

type	date	sots	id	Q3	Q3H%o	Q3H%p	Q3E%o	Q3E%p	Q3L%o	Q3L%p	sov	sovH	sovE	sovL	BAD	info	infoO	infoP	corrH	corrE	corrL	class	contDH	contDE

sec	2000_11	dssp	ALL_proteins:psum	74.5	73	87	71	67	78	70	70.5	64.3	72.3	69.2	2.5	0.34	0.34	0.34	0.69	0.60	0.54	7758.6	7.4	5.7
sec	2000_11	dssp	ALL_proteins:sig	9.3	33	35	34	32	11	12	13.7	29.6	25.4	13.9	4.0	0.13	0.13	0.13	0.23	0.23	0.15	7684.1	7.2	7.2
sec	2000_11	dssp	ALL_proteins:errsig	0.26	0.94	0.99	0.95	0.91	0.32	0.33	0.38	0.83	0.71	0.38	0.11	0.00	0.00	0.00	0.00	0.00	0.00	215.1	0.20	0.20
sec	2000_11	dssp	THIS_month:psum	75.1	64	70	49	47	73	75	71.0	69.8	73.6	65.7	2.2	0.32	0.31	0.33	0.60	0.65	0.53	71.7	7.8	5.1

sec	2000_11	dssp	1by6:A	47.2	66	25	0	0	43	86	22.3	35	100	21	0.0	0.05	0.08	0.04	0.20	1.0	0.07	100.0	27.0	13.0
sec	2000_11	dssp	1c0p:A	72.5	70	81	68	73	76	67	71.5	81	80	61	1.6	0.32	0.32	0.33	0.66	0.60	0.48	100.0	4.0	1.0
sec	2000_11	dssp	1dd3:C	87.5	95	88	0	0	66	85	89.1	100	100	61	0.0	0.39	0.37	0.41	0.67	1.0	0.67	100.0	6.0	0.00
sec	2000_11	dssp	1dfc:A	73.1	0	0	84	70	69	81	76.1	0	81	78	2.9	0.22	0.22	0.23	-0.03	0.56	0.52	0.0	1.0	8.0
sec	2000_11	dssp	1dk4:A	74.6	77	87	82	58	68	79	77.1	82	82	71	2.7	0.37	0.38	0.37	0.74	0.58	0.54	0.0	3.0	9.0
sec	2000_11	dssp	1dpu:A	85.5	93	93	33	100	92	76	83.4	100	33	80	0.0	0.60	0.55	0.65	0.88	0.55	0.72	0.0	0.00	8.0
sec	2000_11	dssp	1e0f:I	86.0	0	0	33	60	95	88	65.3	100	37	70	0.0	0.14	0.12	0.17	1.0	0.37	0.37	100.0	0.00	7.0
sec	2000_11	dssp	1e5d:A	81.5	81	95	82	76	80	72	83.7	93	83	74	0.7	0.52	0.52	0.52	0.81	0.72	0.62	100.0	5.0	1.0
sec	2000_11	dssp	1e5k:A	80.3	86	80	70	84	80	78	82.9	92	76	79	0.5	0.45	0.45	0.46	0.74	0.71	0.61	0.0	2.0	3.0
sec	2000_11	dssp	1e79:I	57.4	92	44	100	42	36	100	40.3	41	66	37	2.1	0.28	0.30	0.27	0.41	0.62	0.41	100.0	31.0	8.0
sec	2000_11	dssp	1e96:B	72.8	76	84	0	0	71	61	69.0	76	0	59	4.3	0.17	0.18	0.17	0.48	-0.03	0.49	100.0	5.0	0.00
sec	2000_11	dssp	1ehx:A	73.4	25	100	88	61	75	85	75.3	33	83	80	7.4	0.30	0.28	0.33	0.47	0.54	0.62	0.0	9.0	15.0
sec	2000_11	dssp	1eij:A	75.0	95	70	0	0	48	88	77.4	93	100	55	0.0	0.22	0.20	0.25	0.50	1.0	0.50	100.0	19.0	0.00
sec	2000_11	dssp	1eq2:A	70.6	56	94	72	64	88	60	64.8	59	75	67	4.1	0.32	0.32	0.33	0.59	0.61	0.53	100.0	19.0	2.0
sec	2000_11	dssp	1ev0:A	72.4	66	100	66	75	84	57	77.8	71	94	69	1.7	0.40	0.39	0.41	0.74	0.58	0.50	100.0	12.0	3.0
sec	2000_11	dssp	1eyb:A	67.4	0	0	58	73	84	65	56.5	0	68	54	2.3	0.15	0.14	0.18	-0.03	0.45	0.40	100.0	5.0	8.0
sec	2000_11	dssp	1f2n:A	66.7	21	66	83	61	68	71	65.0	22	74	69	3.7	0.19	0.18	0.21	0.32	0.53	0.40	0.0	10.0	12.0
sec	2000_11	dssp	1f5m:A	72.7	66	100	74	60	78	65	70.1	75	70	65	3.9	0.38	0.38	0.38	0.73	0.54	0.52	0.0	13.0	5.0
sec	2000_11	dssp	1f6v:A	77.8	96	62	0	0	66	97	77.6	80	100	76	0.0	0.34	0.35	0.34	0.61	1.0	0.61	0.0	20.0	0.00
sec	2000_11	dssp	1faf:A	86.1	85	91	0	0	86	78	72.4	78	100	63	0.0	0.41	0.41	0.41	0.71	1.0	0.71	100.0	3.0	0.00
sec	2000_11	dssp	1fc3:A	81.5	85	87	0	0	70	66	82.5	90	100	65	0.0	0.24	0.25	0.24	0.55	1.0	0.55	100.0	1.0	0.00
sec	2000_11	dssp	1fd3:A	70.7	0	0	84	52	81	90	78.4	0	87	94	14.6	0.37	0.31	0.44	1.0	0.45	0.71	100.0	14.0	19.0
sec	2000_11	dssp	1ff9:A	81.8	91	80	90	78	70	85	91.6	97	96	84	0.0	0.52	0.53	0.52	0.79	0.77	0.63	0.0	3.0	3.0
sec	2000_11	dssp	1fi2:A	78.6	52	85	86	70	82	83	66.8	52	74	66	2.9	0.37	0.36	0.39	0.62	0.67	0.63	100.0	6.0	6.0
sec	2000_11	dssp	1fo1:A	66.4	78	77	7	7	68	68	58.2	83	4	51	1.3	0.24	0.25	0.25	0.63	-0.02	0.35	100.0	0.00	0.00
sec	2000_11	dssp	1fp3:A	75.1	81	85	28	45	77	64	71.0	85	15	62	3.9	0.26	0.26	0.27	0.62	0.30	0.55	100.0	2.0	3.0
sec	2000_11	dssp	1fs1:A	80.5	88	82	0	0	66	76	64.4	66	100	61	0.0	0.25	0.25	0.26	0.57	1.0	0.57	100.0	4.0	0.00
sec	2000_11	dssp	1fsi:A	74.8	91	74	66	89	67	64	66.7	100	60	51	1.8	0.41	0.41	0.41	0.73	0.67	0.48	100.0	7.0	9.0
sec	2000_11	dssp	1fuk:A	82.8	87	85	91	74	73	87	87.0	98	94	74	1.9	0.50	0.51	0.50	0.78	0.76	0.68	100.0	1.0	5.0
sec	2000_11	dssp	1fvg:A	82.3	76	93	70	66	90	83	73.6	77	72	72	3.1	0.46	0.46	0.47	0.79	0.60	0.70	100.0	5.0	1.0
sec	2000_11	dssp	1fvi:A	60.5	27	46	68	57	73	65	55.2	40	60	60	8.1	0.14	0.14	0.14	0.19	0.48	0.37	100.0	10.0	4.0
sec	2000_11	dssp	1fx8:A	79.1	73	98	0	0	95	57	74.3	73	100	76	1.5	0.34	0.40	0.30	0.61	1.0	0.62	100.0	18.0	1.0
sec	2000_11	dssp	1fy7:A	70.7	68	78	62	68	77	66	70.6	81	70	62	5.1	0.27	0.27	0.28	0.60	0.54	0.51	0.0	4.0	2.0
sec	2000_11	dssp	1fyx:A	67.8	66	76	91	67	60	59	71.2	67	91	67	0.6	0.31	0.33	0.31	0.49	0.74	0.33	100.0	6.0	5.0
sec	2000_11	dssp	1g1p:A	65.6	0	0	85	37	60	93	59.7	100	25	69	0.0	0.13	0.15	0.11	1.0	0.37	0.37	100.0	0.00	28.0
sec	2000_11	dssp	1g25:A	86.2	69	81	37	100	100	86	73.1	69	37	80	3.0	0.51	0.45	0.59	0.69	0.58	0.75	100.0	3.0	7.0
sec	2000_11	dssp	1g2i:A	72.3	56	97	83	72	82	60	74.9	71	86	70	2.4	0.38	0.38	0.39	0.64	0.69	0.50	0.0	16.0	3.0
sec	2000_11	dssp	1g7d:A	88.7	95	88	0	0	75	90	96.2	100	100	89	0.0	0.47	0.45	0.49	0.74	1.0	0.74	100.0	5.0	0.00
sec	2000_11	dssp	1qoj:A	86.7	97	88	0	0	28	66	59.3	66	100	21	0.0	0.15	0.11	0.20	0.37	1.0	0.37	100.0	8.0	0.00

sec	2000_11	dssp	THIS_month:psum	75.1	64	70	49	47	73	75	71.0	69.8	73.6	65.7	2.2	0.32	0.31	0.33	0.60	0.65	0.53	71.7	7.8	5.1

sec	2000_11	dssp	ALL_proteins:psum	74.5	73	87	71	67	78	70	70.5	64.3	72.3	69.2	2.5	0.34	0.34	0.34	0.69	0.60	0.54	7758.6	7.4	5.7
sec	2000_11	dssp	ALL_proteins:sig	9.3	33	35	34	32	11	12	13.7	29.6	25.4	13.9	4.0	0.13	0.13	0.13	0.23	0.23	0.15	7684.1	7.2	7.2
sec	2000_11	dssp	ALL_proteins:errsig	0.26	0.94	0.99	0.95	0.91	0.32	0.33	0.38	0.83	0.71	0.38	0.11	0.00	0.00	0.00	0.00	0.00	0.00	215.1	0.20	0.20

Notations used (detailed explanation)

psum	percentage over all proteins
sig	standard deviation
errsig	significant difference (to distinguish between two methods)

type	prediction type
date	date when added [yyyy_mm_dd]
sots	standard of truth
id	identifier of protein
Q3	three-state per-residue accuracy (percentage of correctly predicted residues)
Q3H%o	correctly predicted helix residues (percentage of helix observed)
Q3H%p	correctly predicted helix residues (percentage of helix predicted)
Q3E%o	correctly predicted strand residues (percentage of helix observed)
Q3E%p	correctly predicted strand residues (percentage of helix predicted)
Q3L%o	correctly predicted loop residues (percentage of helix observed)
Q3L%p	correctly predicted loop residues (percentage of helix predicted)
sov	per segment accuracy (three states)
sovH	per segment accuracy for helix residues
sovE	per segment accuracy for strand residues
sovL	per segment accuracy for non-regular residues
BAD	percentage of confused HELIX/STRAND residues (helix predicted as strand, strand predicted as helix)
infoO	information index accuracy (percentage of observed)
infoP	information index accuracy (percentage of predicted)
corrH	Matthews correlation index for helix
corrE	Matthews correlation index for strand
corrL	Matthews correlation index for loop
var	variance over all proteins (1/N-1)( score(i) - )*2
sig	sigma (standard deviation) over all proteins (sqrt[var])
errsig	significant differences ( standard dev / sqrt(Nprot) )

Last update: 2000_11
Contact: rost@columbia.edu
WWW: http://cubic.bioc.columbia.edu/eva

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