EVA: Detailed information for proteins added on: 2000_07_12

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2000_07_12	1dow	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CELL ADHESION	MOLECULE: ALPHA-CATENIN; CHAIN: A; FRAGMENT: DIMERIZATION AND BETA-CATENIN BINDING REGION; ENGINEERED: YES; MOLECULE: BETA-CATENIN; CHAIN: B; FRAGMENT: ALPHA-CATENIN BINDING REGION; ENGINEERED: YES	MUS MUSCULUS; MOUSE; MUS MUSCULUS; MOUSE;	S.POKUTTA,W.I.WEIS	1dow	2000_07_12
2000_07_12	1dk8	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: AXIN; CHAIN: A; FRAGMENT: RGS-HOMOLOGOUS DOMAIN; ENGINEERED: YES	HOMO SAPIENS; HUMAN;	K.E.SPINK,P.POLAKIS,W.I.WEIS	1dk8	2000_07_12
2000_07_12	1ds1	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE,LYASE	MOLECULE: CLAVAMINATE SYNTHASE 1; CHAIN: A; FRAGMENT: CLAVAMINIC ACID SYNTHASE 1 (CAS1); SYNONYM: CLAVAMINIC ACID SYNTHASE 1, CAS1; ENGINEERED: YES	STREPTOMYCES CLAVULIGERUS; BACTERIA;	Z.H.ZHANG,J.REN,D.K.STAMMERS,J.E.BALDWIN,K.HARLOS, C.J.SCHOFIELD	1ds1	2000_07_12
2000_07_12	1dqz	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	IMMUNE SYSTEM	MOLECULE: ANTIGEN 85-C; CHAIN: A, B; SYNONYM: 85C	MYCOBACTERIUM TUBERCULOSIS; BACTERIA	D.R.RONNING,T.KLABUNDE,J.C.SACCHETTINI	1dqz	2000_07_12
2000_07_12	1dp4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR RECEPTOR, LYASE	MOLECULE: ATRIAL NATRIURETIC PEPTIDE RECEPTOR A; CHAIN: A, C; FRAGMENT: HORMONE BINDING DOMAIN; EC: 4.6.1.2; ENGINEERED: YES	RATTUS NORVEGICUS; RAT;	F.VAN DEN AKKER,V.C.YEE	1dp4	2000_07_12
2000_07_12	1e2t	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE; CHAIN: A, B, C, D, E, F, G, H; SYNONYM: NAT; EC: 2.3.1.118; ENGINEERED: YES	SALMONELLA TYPHIMURIUM; GENE: NHOA;	J.C.SINCLAIR,J.SANDY,R.DELGODA,E.SIM,M.E.M.NOBLE	1e2t	2000_07_12
2000_07_12	1ej6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	VIRUS/VIRAL PROTEIN	MOLECULE: LAMBDA2; CHAIN: A; MOLECULE: LAMBDA1; CHAIN: B, C; MOLECULE: SIGMA2; CHAIN: D, E	REOVIRUS; STRAIN: REASSORTANT F18; REOVIRUS; STRAIN: REASSORTANT F18; REOVIRUS; STRAIN: REASSORTANT F18	K.M.REINISCH,M.L.NIBERT,S.C.HARRISON	1ej6	2000_07_12
2000_07_12	1c8u	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: ACYL-COA THIOESTERASE II; CHAIN: A, B; EC: 3.1.2.-; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	J.LI,Z.S.DEREWENDA	1c8u	2000_07_12
2000_07_12	1f02	T	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CELL ADHESION	MOLECULE: INTIMIN; CHAIN: I; FRAGMENT: C-TERMINAL DOMAIN (282 RESIDUES); ENGINEERED: YES; MOLECULE: TRANSLOCATED INTIMIN RECEPTOR; CHAIN: T; FRAGMENT: INTIMIN-BINDING DOMAIN; SYNONYM: TIR; ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA; ESCHERICHIA COLI; BACTERIA;	Y.LUO,E.A.FREY,R.A.PFUETZNER,A.L.CREAGH,D.G.KNOECHEL, C.A.HAYNES,B.B.FINLAY,N.C.J.STRYNADKA	1f02	2000_07_12
2000_07_12	1dow	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CELL ADHESION	MOLECULE: ALPHA-CATENIN; CHAIN: A; FRAGMENT: DIMERIZATION AND BETA-CATENIN BINDING REGION; ENGINEERED: YES; MOLECULE: BETA-CATENIN; CHAIN: B; FRAGMENT: ALPHA-CATENIN BINDING REGION; ENGINEERED: YES	MUS MUSCULUS; MOUSE; MUS MUSCULUS; MOUSE;	S.POKUTTA,W.I.WEIS	1dow	2000_07_12
2000_07_12	1ej6	B-D	pdb_ascii	dssp	fasta	psi_ascii	psi_html	VIRUS/VIRAL PROTEIN	MOLECULE: LAMBDA2; CHAIN: A; MOLECULE: LAMBDA1; CHAIN: B, C; MOLECULE: SIGMA2; CHAIN: D, E	REOVIRUS; STRAIN: REASSORTANT F18; REOVIRUS; STRAIN: REASSORTANT F18; REOVIRUS; STRAIN: REASSORTANT F18	K.M.REINISCH,M.L.NIBERT,S.C.HARRISON	1ej6	2000_07_12
2000_07_12	1scf	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HORMONE/GROWTH FACTOR	MOLECULE: STEM CELL FACTOR; CHAIN: A, B, C, D; SYNONYM: SCF, SL, MGF, MAST CELL GROWTH FACTOR; ENGINEERED: YES	HOMO SAPIENS; HUMAN;	X.JIANG,O.GUREL,K.E.LANGLEY,W.A.HENDRICKSON	1scf	2000_07_12
2000_07_12	1qu7	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: METHYL-ACCEPTING CHEMOTAXIS PROTEIN I; CHAIN: A, B; FRAGMENT: CYTOPLASMIC DOMAIN (RESIDUE 286-526); ENGINEERED: YES	ESCHERICHIA COLI; BACTERIA;	K.K.KIM,H.YOKOTA,S.-H.KIM	1qu7	2000_07_12

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field