EVA: Detailed information for proteins added on: 2000_12_27

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2000_12_27	1f62	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSCRIPTION	MOLECULE: TRANSCRIPTION FACTOR WSTF; CHAIN: A; FRAGMENT: PHD ZINC FINGER; ENGINEERED: YES	HOMO SAPIENS; HUMAN;	J.PASCUAL,M.MARTINEZ-YAMOUT,H.J.DYSON,P.E.WRIGHT	1f62	2000_12_27
2000_12_27	1f53	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TOXIN	MOLECULE: YEAST KILLER TOXIN-LIKE PROTEIN; CHAIN: A	STREPTOMYCES SP.; BACTERIA; CELL: F-287	S.OHKI,E.KARIYA,K.HIRAGA,A.WAKAMIYA,T.ISOBE,K.ODA,M.KAINOSHO	1f53	2000_12_27
2000_12_27	1fou	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	VIRUS/VIRAL PROTEIN	MOLECULE: UPPER COLLAR PROTEIN; CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; SYNONYM: GP 10, CONNECTOR PROTEIN, LATE PROTEIN GP10, P10 CONNECTOR PROTEIN; ENGINEERED: YES	BASCILLUS SUBTILIS BACTERIOPHAGE PHI29; BACTERIOPHAGE;	A.A.SIMPSON,Y.TAO,P.G.LEIMAN,M.O.BADASSO,Y.HE,P.J.JARDINE, N.H.OLSON,M.C.MORAIS,S.N.GRIMES,D.L.ANDERSON,T.S.BAKER, M.G.ROSSMANN	1fou	2000_12_27
2000_12_27	1fxo	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE; CHAIN: A, B, C, D, E, F, G, H; SYNONYM: GLUCOSE-1-PHOSPHATE THYMIDYLYLTRANSFERASE (RMLA); EC: 2.7.7.24; ENGINEERED: YES	PSEUDOMONAS AERUGINOSA; BACTERIA;	W.BLANKENFELDT,J.S.LAM,J.H.NAISMITH	1fxo	2000_12_27
2000_12_27	1g99	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: ACETATE KINASE; CHAIN: A, B; EC: 2.7.2.1; ENGINEERED: YES	METHANOSARCINA THERMOPHILA; ARCHAEA; GENE: ACK;	K.A.BUSS,D.R.COOPER,C.INGRAM-SMITH,J.G.FERRY,D.A.SANDERS, M.S.HASSON	1g99	2000_12_27
2000_12_27	1f5q	B	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: CYCLIN DEPENDENT KINASE 2; CHAIN: A, C; EC: 2.7.1.-; ENGINEERED: YES; MOLECULE: GAMMA HERPESVIRUS CYCLIN; CHAIN: B, D; ENGINEERED: YES	HOMO SAPIENS; HUMAN; MURINE HERPESVIRUS GAMMA 68;	G.L.CARD,P.KNOWLES,H.LAMAN,N.JONES,N.Q.MCDONALD	1f5q	2000_12_27

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field