EVA: Detailed information for proteins added on: 2001_01_24

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2001_01_24	1fe6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html		MOLECULE: TETRABRACHION; CHAIN: A, B, C, D; FRAGMENT: RIGHT HANDED COILED COIL	STAPHYLOTHERMUS MARINUS; ARCHAEBACTERIA	J.STETEFELD	1fe6	2001_01_24
2001_01_24	1fc6	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: PHOTOSYSTEM II D1 PROTEASE; CHAIN: A; FRAGMENT: RESIDUES 77-464; SYNONYM: D1 C-TERMINAL PROCESSING PROTEASE; ENGINEERED: YES; MUTATION: YES	SCENEDESMUS OBLIQUUS; ALGAE;	D.I.LIAO,J.QIAN,D.A.CHISHOLM,D.B.JORDAN,B.A.DINER	1fc6	2001_01_24
2001_01_24	1g6o	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: CAG-ALPHA; CHAIN: A, B; SYNONYM: TRAFFIC ATPASE; ENGINEERED: YES	HELICOBACTER PYLORI; BACTERIA;	H.-J.YEO,S.N.SAVVIDES,A.B.HERR,E.LANKA,G.WAKSMAN	1g6o	2001_01_24
2001_01_24	1g4u	S	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: PROTEIN TYROSINE PHOSPHATASE SPTP; CHAIN: S; FRAGMENT: SPTP RESIDUES 161-543; ENGINEERED: YES; MOLECULE: RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1; CHAIN: R; FRAGMENT: RAC1 RESIDUES 1-184; ENGINEERED: YES; MUTATION: YES	SALMONELLA TYPHIMURIUM; BACTERIA; GENE: SPTP; HOMO SAPIENS; HUMAN; GENE: RAC1;	C.E.STEBBINS,J.E.GALAN	1g4u	2001_01_24
2001_01_24	1emx	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TOXIN	MOLECULE: HETEROPODATOXIN 2; CHAIN: A; SYNONYM: HPTX2; ENGINEERED: YES	HETEROPODIDAE VENATORIA; SPIDER; OTHER_DETAILS: VENOM OF SPIDER	C.BERNARD,C.LEGROS,G.FERRAT,U.BISHOFF,A.MARQUARDT,O.PONGS, H.DARBON	1emx	2001_01_24
2001_01_24	1hx2	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE INHIBITOR	MOLECULE: BSTI; CHAIN: A; SYNONYM: BOMBINA SKIN TRYPSIN INHIBITOR	BOMBINA BOMBINA; FIRE-BELLIED TOAD; OTHER_DETAILS: FROGS WERE STIMULATED WITH MILD ELECTRIC SHOCKS. SKIN SECRETIONS WERE COLLECTED. BSTI WAS ISOLATED FROM THE SKIN SECRETIONS.	K.J.ROSENGREN,N.L.DALY,M.J.SCANLON,D.J.CRAIK	1hx2	2001_01_24
2001_01_24	1fzp	D	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSCRIPTION/DNA	MOLECULE: STAPHYLOCOCCAL ACCESSORY REGULATOR A; CHAIN: D, B; SYNONYM: SARA; ENGINEERED: YES; MOLECULE: 5'-D(PAPTPAPTPAPTP*A)-3'; CHAIN: W, K; ENGINEERED: YES	STAPHYLOCOCCUS AUREUS; BACTERIA; STRAIN: DB; SYNTHETIC: YES	M.A.SCHUMACHER,B.HURLBURT,R.G.BRENNAN	1fzp	2001_01_24

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field