EVA: Detailed information for proteins added on: 2001_02_28

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2001_02_28	1fx2	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	LYASE	MOLECULE: RECEPTOR-TYPE ADENYLATE CYCLASE GRESAG 4.1; CHAIN: A; FRAGMENT: CATALYTIC DOMAIN; EC: 4.6.1.1; ENGINEERED: YES	TRYPANOSOMA BRUCEI; TRYPANOSOME; STRAIN: STRAIN 927;	B.BIEGER,L.-O.ESSEN	1fx2	2001_02_28
2001_02_28	1fqj	C	pdb_ascii	dssp	fasta	psi_ascii	psi_html	SIGNALING PROTEIN	MOLECULE: CHIMERA OF GUANINE NUCLEOTIDE-BINDING PROTEIN G(T), ALPHA-1 SUBUNIT AND GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT; CHAIN: A, D; ENGINEERED: YES; OTHER_DETAILS: THE CHIMERA COMPRISES RESIDUES 26 TO 215 OF BOVINE GT, RESIDUES 220 TO 298 OF RAT GI1, AND RESIDUES 295 TO 350 OF BOVINE GT; MOLECULE: REGULATOR OF G-PROTEIN SIGNALING 9; CHAIN: B, E; FRAGMENT: RGS DOMAIN (RESIDUES 276-422); SYNONYM: RGS9; ENGINEERED: YES; MOLECULE: RETINAL ROD RHODOPSIN-SENSITIVE CGMP 3',5'- CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT; CHAIN: C; FRAGMENT: PDEGAMMA (RESIDUES 46-87); SYNONYM: PDEGAMMA, GMP-PDE GAMMA; EC: 3.1.4.17; ENGINEERED: YES	BOS TAURUS AND RATTUS NORVEGICUS; BOVINE AND RAT; BOS TAURUS; BOVINE; BOS TAURUS; BOVINE;	K.C.SLEP,M.A.KERCHER,W.HE,C.W.COWAN,T.G.WENSEL,P.B.SIGLER	1fqj	2001_02_28
2001_02_28	1evy	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	MOLECULE: GLYCEROL-3-PHOSPHATE DEHYDROGENASE; CHAIN: A; EC: 1.1.1.8; ENGINEERED: YES	LEISHMANIA MEXICANA; TRYPANOSOME;	S.SURESH,S.TURLEY,F.R.OPPERDOES,P.A.M.MICHELS,W.G.J.HOL	1evy	2001_02_28
2001_02_28	1cwy	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: AMYLOMALTASE; CHAIN: A; FRAGMENT: MALQ; EC: 2.4.1.25; ENGINEERED: YES	THERMUS AQUATICUS; BACTERIA; FINAL PLASMID WITH CLONED GENE PFQG8	I.PRZYLAS,K.TOMOO,Y.TERADA,T.TAKAHA,K.FUJI,W.SAENGER, N.STRAETER	1cwy	2001_02_28
2001_02_28	1how	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: SERINE/THREONINE-PROTEIN KINASE YMR216C; CHAIN: A; FRAGMENT: SKY1PDELTANS; EC: 2.7.1.-; ENGINEERED: YES; MUTATION: YES	SACCHAROMYCES CEREVISIAE; YEAST; GENE: YMR216C;	B.J.NOLEN,C.Y.YUN,C.F.WONG,J.A.MCCAMMON,X.-D.FU,G.GHOSH	1how	2001_02_28
2001_02_28	1i1i	P	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: NEUROLYSIN; CHAIN: P; EC: 3.4.24.16; ENGINEERED: YES	RATTUS NORVEGICUS; RAT;	C.K.BROWN,K.MADAUSS,W.LIAN,W.D.TOLBERT,M.R.BECK,D.W.RODGERS	1i1i	2001_02_28

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field