EVA: Detailed information for proteins added on: 2001_05_02

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2001_05_02	1g5v	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSLATION	MOLECULE: SURVIVAL MOTOR NEURON PROTEIN 1; CHAIN: A; FRAGMENT: TUDOR DOMAIN; ENGINEERED: YES	HOMO SAPIENS; HUMAN; GENE: SMN1; TERMINAL HIS6-GST AND TEV CLEAVAGE SITE	P.SELENKO,R.SPRANGERS,G.STIER,D.BUEHLER,U.FISCHER,M.SATTLER	1g5v	2001_05_02
2001_05_02	1ews	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	ANTIMICROBIAL PROTEIN	MOLECULE: RK-1 DEFENSIN; CHAIN: A; SYNONYM: ALPHA-DEFISIN	ORYCTOLAGUS CUNICULUS; RABBIT; ORGAN: KIDNEY	A.M.MCMANUS,N.F.DAWSON,J.D.WADE,D.J.CRAIK	1ews	2001_05_02
2001_05_02	1ifq	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	PROTEIN TRANSPORT	MOLECULE: VESICLE TRAFFICKING PROTEIN SEC22B; CHAIN: A, B; FRAGMENT: N-TERMINAL DOMAIN (RESIDUES 2-127); ENGINEERED: YES	MUS MUSCULUS; MOUSE;	L.C.GONZALEZ JR.,W.I.WEIS,R.H.SCHELLER	1ifq	2001_05_02

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field