EVA: Detailed information for proteins added on: 2001_08_08

Note

not all PDB files correspond to a prediction. Instead, predictions are restricted by the following criteria:

Ab initio prediction:
no protein with significant sequence similarity to a PDB protein already known is listed.
Comparative modelling:
ONLY proteins with significant sequence similarity to known PDB proteins are listed.
Threading:
ONLY proteins which are structurally similar to known PDB proteins are listed
jump to notations used

date	id	chains	PDB ASCII	DSSP ASCII	FASTA ASCII	PSI-Blast ASCII	PSI-Blast HTML	PDB header	PDB compnd	PDB source	PDB author	id	date
2001_08_08	1g8p	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	PHOTOSYNTHESIS, METAL TRANSPORT	MOLECULE: MAGNESIUM-CHELATASE 38 KDA SUBUNIT; CHAIN: A; FRAGMENT: BCHI SUBUNIT; SYNONYM: MG-PROTOPORPHYRIN IX CHELATASE; ENGINEERED: YES	RHODOBACTER CAPSULATUS; BACTERIA; GENE: BCHI_RHOCA;	M.N.FODJE,A.HANSSON,M.HANSSON,J.G.OLSEN,S.GOUGH,R.D.WILLOWS, S.AL-KARADAGHI	1g8p	2001_08_08
2001_08_08	1j7l	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TRANSFERASE	MOLECULE: AMINOGLYCOSIDE 3'-PHOSPHOTRANSFERASE; CHAIN: A, B; SYNONYM: APH(3')III; EC: 2.7.1.95; ENGINEERED: YES	ENTEROCOCCUS FAECALIS; BACTERIA;	D.L.BURK,W.C.HON,A.K.-W.LEUNG,A.M.BERGHUIS	1j7l	2001_08_08
2001_08_08	1jc7	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CELL ADHESION	MOLECULE: AGRIN; CHAIN: A; FRAGMENT: LAMININ-BINDING DOMAIN; ENGINEERED: YES	GALLUS GALLUS; CHICKEN;	J.STETEFELD	1jc7	2001_08_08
2001_08_08	1jb3	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	CELL ADHESION	MOLECULE: AGRIN; CHAIN: A; FRAGMENT: LAMININ-BINDING DOMAIN; ENGINEERED: YES	GALLUS GALLUS; CHICKEN;	J.STETEFELD	1jb3	2001_08_08
2001_08_08	1jp4	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE; CHAIN: A; SYNONYM: PIPASE: PAP AND INOSITOL 1,4 BISPHOSPHATE PHOSPHATASE; EC: 3.1.3.7, 3.1.3.57; ENGINEERED: YES	RATTUS NORVEGICUS; RAT; GENE: SAL3;	S.PATEL,L.YENUSH,P.L.RODRIGUEZ,R.SERRANO,T.L.BLUNDELL	1jp4	2001_08_08
2001_08_08	1h70	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	HYDROLASE	MOLECULE: NG,NG-DIMETHYLARGININE DIMETHYLAMINOHYDROLASE; CHAIN: A; EC: 3.5.3.18; ENGINEERED: YES; MUTATION: YES	PSEUDOMONAS AERUGINOSA;	J.MURRAY-RUST,J.LEIPER,M.MCALISTER,J.PHELAN,S.TILLEY, J.SANTAMARIA,P.VALLANCE,N.MCDONALD	1h70	2001_08_08
2001_08_08	1i8n	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	TOXIN	MOLECULE: ANTI-PLATELET PROTEIN; CHAIN: A, B, C; ENGINEERED: YES	HAEMENTERIA OFFICINALIS; LEECH; GENE: LAPP;	E.G.HUIZINGA,A.SCHOUTEN,T.M.CONNOLLY,J.KROON,J.J.SIXMA, P.GROS	1i8n	2001_08_08
2001_08_08	1i19	A	pdb_ascii	dssp	fasta	psi_ascii	psi_html	OXIDOREDUCTASE	MOLECULE: CHOLESTEROL OXIDASE; CHAIN: A, B; EC: 1.1.3.6; ENGINEERED: YES; OTHER_DETAILS: COVALENT FAD	BREVIBACTERIUM STEROLICUM; BACTERIA;	R.COULOMBE,K.Q.YUE,S.GHISLA,A.VRIELINK	1i19	2001_08_08

Notations used

date	date of weekly update
id	PDB identifier of protein
chains	PDB chain identifiers of protein (contains links only to sequence unique chains)
PDB ASCII	ASCII (plain text) version of raw PDB file
DSSP ASCII	ASCII (plain text) version of raw DSSP file, i.e. assignment of secondary structure and solvent accessibility for PDB
FASTA ASCII	ASCII version of PDB sequence in FASTA format
PSI-Blast HTML	gzipped version of PSI-BLAST in HTML from MVIEW. WATCH it files may be VERY large!) size of file in brackets)
PSI-Blast ASCII	gzipped version of PSI-BLAST in ASCII (size of file in brackets)
PDB header	PDB 'HEADER' field
PDB compnd	PDB 'COMPND' field
PDB source	PDB 'SOURCE' field
PDB author	PDB 'AUTHOR' field