MARTIN KRALLINGER - RESEARCH PROJECTS



  • BibliomicsDB:
    Project related to the development of a central, integrated resource repository for the construction of a functional gene dictionary, from initial relevant document selection to the extraction of gene product - functional concept associations.

  • Prodisen:
    Project related to the development of a corpus of gene/protein/protein family descriptions sentences.


  • GeneDic:
    Projects related to statistical NLP and text mining methods of biomedical literature for the construction of a functional gene dictionary (gene functional description summaries).


  • GeneTem:
    The Gene Text Miner (GeneTeM) program, a tool for protein annotation relevant text passage retrieval (based on our BioCreative I, task 2 participating system).


  • BioCreative contest:
    Participation strategies for the first BioCreative text mining contest (2004) and organization of the second BioCreative challenge (2006).


  • SigDubs:
    Protein signal sequence analysis and prediction.


  • Genomics TREC Track:
    Participation strategies for the Genomics TREC track 2004 contest.


  • Other projects:
    Small progams, ideas, etc..

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