Data for ENCODE Sequences

Query	Query Len	Template	TempLen	Evalue	Ident	Q-Start	Q-End	T-Start	T-End	Coverage
AC000061_1-001	1480	2BBT_B	290	1E-166	98	388	678	1	290	19.7
AC000123_1-001
AC000123_1-002
AC000123_1-005
AC000123_1-007
AC000357_1-001	775	1I84_V	1184	0.001	22	188	387	948	1177	25.8
AC000357_2-001	180	2B6H_A	192	6E-099	99	7	180	19	192	96.7
AC000370_1-001	908	1ISS_B	490	1E-104	44	41	491	8	468	49.7
AC000370_1-002	908	1ISS_B	490	1E-104	44	41	491	8	468	49.7
AC000370_1-003	501	1ISS_B	490	3E-093	43	41	453	8	429	82.4
AC002064_1-001	490	1JAY_B	212	0.000001	24	37	213	8	200	36.1
AC002064_1-002	454	1JAY_B	212	0.000001	24	37	213	8	200	39
AC002064_1-003	419	1JAY_B	212	0.000001	24	37	213	8	200	42.2
AC002064_1-004	490	1JAY_B	212	0.000001	24	37	213	8	200	36.1
AC002064_1-005	454	1JAY_B	212	0.000001	24	37	213	8	200	39
AC002064_1-006	454	1JAY_B	212	0.000001	24	37	213	8	200	39
AC002064_2-001
AC002064_2-005
AC002064_2-007
AC002064_2-011
AC002064_2-012
AC002064_3-001
AC002465_3-001	475	1N11_A	437	0.00000000000001	27	58	269	191	435	44.6
AC002543_1-002	286	1IZN_C	286	1E-139	86	1	286	1	286	100
AC002543_1-004	225	1IZN_C	286	1E-106	83	2	225	13	236	99.6
AC002543_3-001	1374	1SHY_B	551	0	99	1	533	11	543	38.8
AC002543_3-001	1374	1R1W_A	312	0	99	1033	1344	1	312	22.7
AC002543_3-002	1356	1SHY_B	551	0	99	1	533	11	543	39.3
AC002543_3-002	1356	1R1W_A	312	0	99	1015	1326	1	312	23
AC003987_1-001
AC003987_1-002
AC003987_1-004
AC003987_1-005
AC003987_1-006
AC003987_1-007
AC003987_1-009
AC003987_1-014
AC003987_1-016
AC004039_3-001	146	1IK0_A	113	1E-053	99	35	146	2	113	76.7
AC004039_4-001	153	2INT_	129	4E-063	100	25	153	1	129	84.3
AC004039_4-002	137	2INT_	129	2E-052	87	25	137	1	129	82.5
AC004039_5-001	699	1GOJ_A	355	3E-079	48	11	362	4	347	50.4
AC004039_5-002	702	1GOJ_A	355	3E-079	48	11	362	4	347	50.1
AC004039_5-006
AC004039_5-007	169	1YRS_B	368	2E-032	46	6	169	11	183	97
AC004041_1-001
AC004041_1-002
AC004041_1-003
AC004079_1-001	376	1B72_A	97	1E-016	57	131	203	22	94	19.4
AC004079_3-001	443	1B72_A	97	2E-017	48	147	254	4	97	24.4
AC004079_3-003	443	1B72_A	97	2E-017	48	147	254	4	97	24.4
AC004079_5-001	335	1B72_A	97	2E-038	81	197	291	2	96	28.4
AC004079_7-004
AC004080_10-001	388	1PUF_A	77	3E-015	57	320	383	11	73	16.5
AC004080_2-003	233	1HOM_	68	2E-028	96	156	215	3	62	25.8
AC004080_3-002	230	1HOM_	68	9E-032	95	130	193	2	65	27.8
AC004080_4-001	272	1PUF_A	77	7E-041	100	194	270	1	77	28.3
AC004080_4-005	185	1PUF_A	77	6E-031	100	107	183	1	77	41.6
AC004080_5-001	320	1HOM_	68	7E-027	83	216	275	3	62	18.8
AC004080_6-001	313	1PUF_A	77	4E-022	65	238	303	10	75	21.1
AC004080_7-001	270	1HOM_	68	4E-029	90	196	257	3	64	23
AC004080_8-001	407	1JGG_B	60	7E-029	88	183	242	1	60	14.7
AC004080_9-001	393	1PUF_A	77	3E-031	78	310	380	4	74	18.1
AC004240_1-001	1663	1N11_A	437	3E-017	32	712	937	16	236	13.6
AC004240_1-002
AC004500_1-001	454	3BMP_A	114	1E-016	33	350	454	11	114	23.1
AC004500_2-001	82	2A06_T	81	6E-030	76	2	82	1	81	98.8
AC004500_2-002	82	2A06_T	81	6E-030	76	2	82	1	81	98.8
AC004500_2-005	82	2A06_T	81	6E-030	76	2	82	1	81	98.8
AC004500_3-001
AC004500_4-001
AC004500_4-002
AC004500_4-004
AC004500_4-005
AC004500_4-006
AC004754_1-001
AC004754_1-002
AC004754_1-003
AC004754_1-004
AC004754_1-006
AC004754_1-009
AC004754_1-010
AC004754_1-013
AC004754_1-014
AC004754_2-001	467	1FQK_D	147	2E-049	61	281	424	2	145	30.8
AC004754_2-003	446	1FQK_D	147	2E-049	61	260	403	2	145	32.3
AC004754_2-004	456	1FQK_D	147	1E-049	61	270	413	2	145	31.6
AC004775_1-001	369	1W98_B	283	0.000003	29	156	308	56	205	41.5
AC004775_2-001
AC004775_2-002
AC004775_2-003
AC004775_2-004
AC004775_2-005
AC004775_2-006
AC004775_2-007
AC004775_3-001	549	1N0R_A	126	0.000006	35	345	462	1	110	21.5
AC004775_4-001
AC004775_4-002
AC004775_4-003
AC004775_4-007
AC004969_1-001
AC005370_1-001	155	1RY7_A	155	1E-087	100	1	155	1	155	100
AC005370_1-002	155	1RY7_A	155	1E-087	100	1	155	1	155	100
AC005370_1-004	59	1RY7_A	155	2E-029	100	1	58	1	58	98.3
AC005370_1-006	97	1RY7_A	155	4E-051	100	1	97	1	97	100
AC005370_1-008	155	1RY7_A	155	1E-087	100	1	155	1	155	100
AC005538_1-001
AC005538_1-002
AC005538_4-001
AC005538_4-009
AC006037_1-001
AC006037_1-002
AC006153_2-001
AC006153_2-002
AC006153_2-005
AC006153_2-013
AC006153_3-001	387	1LNZ_B	342	9E-046	36	15	349	2	327	86.6
AC006153_3-002	308	1LNZ_B	342	1E-032	38	33	270	137	327	77.3
AC006159_1-001
AC006159_1-003
AC006159_2-001
AC006293_2-001	410	1IM9_D	225	3E-081	74	116	318	1	203	49.5
AC006326_1-002
AC006985_10-001
AC006985_11-001
AC006985_12-001
AC006985_13-001
AC006985_4-001
AC006985_5-001
AC006985_5-003
AC006985_5-004
AC006985_5-005
AC006985_6-001
AC006985_7-001
AC006985_7-002
AC006985_8-001
AC006985_9-001
AC006985_9-003
AC008440_4-001
AC008440_4-002
AC008440_4-003
AC008440_4-004
AC008440_4-005
AC008440_4-006
AC008440_6-001	697	1XJD_A	345	1E-103	55	345	678	13	338	47.9
AC008440_7-001
AC008440_7-002
AC008440_8-001
AC008440_9-001
AC008440_9-002
AC008599_1-001
AC008746_1-001	287	1VDG_B	197	0.00000006	40	26	120	3	95	33.1
AC008746_1-002	286	1P6F_A	242	0.000005	30	5	138	88	211	46.9
AC008746_1-003	270	1VDG_B	197	0.000000002	39	26	128	3	103	38.1
AC008746_1-004	269	1VDG_B	197	0.000000002	39	25	127	3	103	38.3
AC008746_1-005	269	1B6U_	257	0.0005	29	10	144	107	234	50.2
AC008746_1-015	94	1VDG_B	197	0.00004	38	20	93	3	73	78.7
AC008746_2-001
AC008746_2-002
AC008746_2-003
AC008746_2-004
AC008746_2-007
AC008746_4-001
AC008746_4-002
AC008746_4-003
AC008746_6-001
AC008746_7-001
AC008746_8-001	152	1VDG_B	197	0.000000001	43	24	120	1	95	63.8
AC008746_8-002	135	1VDG_B	197	0.00000000006	43	24	122	1	97	73.3
AC008937_1-001	1492	2BMC_F	306	2E-032	31	1182	1486	5	284	20.4
AC008937_1-004	1492	2BMC_F	306	2E-032	31	1182	1486	5	284	20.4
AC008937_4-001
AC008937_5-001	549	1XC5_A	71	0.00004	43	273	329	15	70	10.4
AC008937_5-003	555	1XC5_A	71	0.0001	44	284	335	20	70	9.4
AC008937_5-004	550	1XC5_A	71	0.0001	44	279	330	20	70	9.5
AC008984_1-001	299	1UGN_A	198	1E-053	58	42	238	1	198	65.9
AC008984_1-002	287	1UGN_A	198	1E-053	58	30	226	1	198	68.6
AC008984_3-001	499	1UGN_A	198	8E-046	53	25	219	2	198	39.1
AC009404_1-001	670	1HV8_B	367	1E-041	33	186	544	13	356	53.6
AC009404_1-003	215	1HV8_B	367	7E-020	29	8	208	146	356	93.5
AC009404_6-001
AC009802_1-001	397	1JRR_A	382	3E-099	47	1	397	1	382	100
AC009802_2-001	139	1HLE_A	345	2E-023	46	1	115	34	144	82.7
AC009802_3-001	374	1JRR_A	382	2E-097	46	1	374	1	382	100
AC009802_3-002	242	1HLE_A	345	5E-064	52	1	237	2	239	97.9
AC009802_3-003	247	1HLE_A	345	3E-064	52	1	237	2	239	96
AC009892_1-002	365	1M4K_A	200	4E-041	49	117	305	3	187	51.8
AC009892_3-001	483	1UGN_A	198	5E-081	80	24	219	1	198	40.6
AC009892_3-002	454	1UGN_A	198	4E-081	80	12	207	1	198	43.2
AC009892_3-003	466	1UGN_A	198	4E-081	80	24	219	1	198	42.1
AC009892_3-006	328	1UGN_A	198	9E-080	80	24	219	1	198	59.8
AC009892_4-001	489	1UGN_A	198	4E-094	88	24	221	1	198	40.5
AC009892_6-001	651	1VDG_B	197	1E-109	100	24	220	1	197	30.3
AC009892_6-002	650	1VDG_B	197	1E-109	100	24	220	1	197	30.3
AC009892_6-003	651	1VDG_B	197	1E-109	100	24	220	1	197	30.3
AC009892_6-004	634	1VDG_B	197	1E-110	100	24	220	1	197	31.1
AC009892_6-005	652	1VDG_B	197	1E-109	100	24	220	1	197	30.2
AC009892_6-007	665	1VDG_B	197	1E-109	100	24	220	1	197	29.6
AC009955_2-001
AC009955_2-004
AC009955_3-001
AC009955_4-001
AC009955_4-002
AC009955_5-001	1804	1E07_A	642	0.0000000001	22	914	1430	127	621	28.7
AC009955_5-002	1025	1BIH_B	395	0.00003	23	1	326	67	384	31.8
AC009955_5-003	711	1PD6_A	104	0.002	34	511	570	34	94	8.4
AC009955_6-001	366	2BHK_A	120	0.00003	24	242	365	1	119	33.9
AC009955_7-001	1088	1XEU_A	263	0.000003	34	180	291	57	162	10.3
AC009955_9-001	1259	1HYN_S	379	7E-059	41	346	709	55	379	28.9
AC009955_9-001	1259	1BZK_A	43	0.00000000002	76	719	760	2	43	3.3
AC009955_9-002	1232	1HYN_S	379	7E-059	41	319	682	55	379	29.5
AC009955_9-002	1232	1BZK_A	43	0.00000000002	76	692	733	2	43	3.4
AC010492_1-001	464	1UFU_A	197	1E-053	58	26	220	2	197	42
AC010492_3-001	590	1UGN_A	198	7E-049	57	24	219	1	198	33.2
AC010492_3-002	491	1UFU_A	197	8E-041	53	26	218	2	197	39.3
AC010518_1-001	597	1UGN_A	198	1E-081	81	24	220	1	198	33
AC010518_1-003	598	1UGN_A	198	1E-081	81	24	220	1	198	32.9
AC010518_1-004	597	1UGN_A	198	1E-081	81	24	220	1	198	33
AC010518_1-005	510	1UGN_A	198	9E-082	81	24	220	1	198	38.6
AC010518_2-001	439	1VDG_B	197	4E-092	88	24	219	1	196	44.6
AC010518_2-002	375	1UGN_A	198	6E-064	63	24	256	1	198	62.1
AC010518_2-003	456	1VDG_B	197	2E-092	88	41	236	1	196	43
AC011330_1-001	417	1QK1_H	379	0	100	39	417	1	379	90.9
AC011330_2-001
AC011330_3-001
AC011330_3-002
AC011330_3-004
AC011330_3-009
AC011330_7-001	417	1QK1_H	379	0	100	39	417	1	379	90.9
AC011330_7-002	417	1QK1_H	379	0	100	39	417	1	379	90.9
AC011330_7-003	222	1QK1_H	379	4E-079	82	39	213	1	144	78.8
AC011330_7-004	148	1QK1_H	379	1E-064	100	39	148	1	110	74.3
AC011501_1-001	341	1B6U_	257	1E-128	100	22	245	1	224	65.7
AC011501_3-001	348	1IM9_D	225	1E-125	99	22	245	2	225	64.4
AC011501_5-001	273	1IM9_D	225	9E-066	61	24	242	2	225	80.2
AC011501_5-003	342	1IM9_D	225	3E-061	61	24	235	2	218	62
AC011501_5-004	325	1NKR_	201	1E-054	59	24	218	2	201	60
AC011501_5-005	256	1IM9_D	225	3E-055	59	24	219	2	202	76.6
AC011501_5-006
AC011501_5-007	230	1NKR_	201	1E-042	83	25	123	103	201	43
AC011501_5-008	397	1IM9_D	225	5E-065	61	22	240	2	225	55.2
AC011501_6-001	444	1B6U_	257	1E-103	84	119	340	3	224	50
AC011501_6-002	349	1IM9_D	225	1E-101	83	22	245	2	225	64.2
AC011501_6-003	427	1B6U_	257	5E-092	84	119	319	3	203	47.1
AC011515_1-001	448	1UFU_A	197	2E-041	52	26	219	2	197	43.3
AC011515_1-002	447	1UFU_A	197	2E-041	52	26	219	2	197	43.4
AC011515_1-003	449	1UFU_A	197	2E-041	52	26	219	2	197	43.2
AC011515_1-004	395	1UFU_A	197	1E-041	52	26	219	2	197	49.1
AC011515_1-006	399	1UFU_A	197	7E-042	52	26	219	2	197	48.6
AC011711_1-001
AC011711_3-001
AC012314_1-001	236	1VDG_B	197	0.000002	35	27	118	4	96	39
AC012314_1-003
AC012314_10-001
AC012314_11-001
AC012314_11-011
AC012314_12-001
AC012314_12-002
AC012314_12-004
AC012314_13-001	310	1RLV_A	305	0.00008	40	220	290	219	291	22.9
AC012314_13-003	310	1RLV_A	305	0.00008	40	220	290	219	291	22.9
AC012314_13-004	310	1RLV_A	305	0.00008	40	220	290	219	291	22.9
AC012314_13-005
AC012314_13-006
AC012314_14-001	194	1S1H_D	179	4E-060	71	20	186	1	167	86.1
AC012314_14-003	194	1S1H_D	179	4E-060	71	20	186	1	167	86.1
AC012314_14-010	194	1S1H_D	179	4E-060	71	20	186	1	167	86.1
AC012314_15-001	631	1UGN_A	198	2E-054	59	24	220	1	198	31.2
AC012314_3-001	282	1B6U_	257	0.0000000000002	32	30	238	5	220	74.1
AC012314_3-002	286	1B6U_	257	0.0000000000002	32	34	242	5	220	73.1
AC012314_3-003	276	1B6U_	257	0.000000001	31	30	232	5	220	73.6
AC012314_3-004	263	1UGN_A	198	3E-016	35	31	213	4	192	69.6
AC012314_3-005	267	1UGN_A	198	2E-016	35	35	217	4	192	68.5
AC012314_3-006	252	1UGN_A	198	2E-016	35	20	202	4	192	72.6
AC012314_3-007
AC012314_3-008	271	1B6U_	257	0.0000000000002	32	19	227	5	220	77.1
AC012314_4-001
AC012314_4-010
AC012314_5-001
AC012314_5-003
AC012314_7-001	499	1NT2_B	258	0.000001	29	196	330	119	254	27.1
AC012314_7-002	364	1NT2_B	258	0.0000001	29	196	334	119	258	38.2
AC012314_7-003	493	1NT2_B	258	0.00001	28	196	324	119	254	26.2
AC012314_7-005	285	1NT2_B	258	0.00006	32	196	263	119	186	23.9
AC012314_7-006	277	1NT2_B	258	0.00006	32	196	263	119	186	24.5
AC012314_7-009	261	1NT2_B	258	0.0003	34	196	256	119	179	23.4
AC012314_9-001
AC012314_9-004
AC012314_9-008
AC012314_9-009
AC012630_1-001	814	1UGV_A	72	3E-030	98	754	814	6	66	7.5
AC012630_1-001	814	1F7C_A	231	1E-121	93	353	583	1	231	28.4
AC012630_1-008	759	1F7C_A	231	1E-120	93	353	583	1	231	30.4
AC012630_1-008	759	1UGV_A	72	7E-030	94	693	759	2	66	8.8
AC015691_10-001	488	1JM7_A	112	0.000002	32	9	84	18	89	15.6
AC015691_10-003	488	1JM7_A	112	0.000002	32	9	84	18	89	15.6
AC015691_11-001	842	1JM7_A	112	0.000004	32	363	438	18	89	9
AC015691_12-001	493	1JM7_A	112	0.0000009	35	15	83	24	89	14
AC015691_12-003	326	1JM7_A	112	0.000002	34	15	83	24	89	21.2
AC015691_12-004	347	1JM7_A	112	0.000002	34	15	83	24	89	19.9
AC015691_12-009
AC015691_8-001
AC015691_9-001	488	1JM7_A	112	0.000003	28	5	85	14	90	16.6
AC015691_9-002	462	1JM7_A	112	0.000002	31	5	90	14	91	18.6
AC015691_9-003	516	1JM7_A	112	0.000003	28	33	113	14	90	15.7
AC017003_2-001
AC018375_11-001
AC018375_2-001	261	1SLM_	255	5E-047	43	31	253	20	247	85.4
AC018375_4-001	312	1U19_A	349	0.004	24	27	130	38	144	33.3
AC018375_5-001
AC018375_6-001	321	1U19_A	349	0.0006	20	35	306	44	319	84.7
AC018375_8-001
AC018375_9-001
AC018512_1-001	505	1MEK_	120	5E-021	48	27	136	9	120	21.8
AC018512_1-004	485	1MEK_	120	1E-016	46	9	116	12	120	22.3
AC018512_4-001	397	1XAW_A	140	0.00001	27	286	393	33	138	27.2
AC018512_4-004
AC018512_5-001
AC018512_5-002
AC018512_5-005
AC018512_6-001
AC018512_6-004
AC018512_7-001
AC018512_7-005
AC018512_8-001
AC018924_1-001	1972	1KZY_D	259	1E-151	100	1714	1972	1	259	13.1
AC018924_1-001	1972	1SSF_A	156	2E-085	98	1478	1632	2	156	7.9
AC018924_1-002	1972	1KZY_D	259	1E-151	100	1714	1972	1	259	13.1
AC018924_1-002	1972	1SSF_A	156	2E-085	98	1478	1632	2	156	7.9
AC018924_1-004	1922	1KZY_D	259	1E-151	100	1664	1922	1	259	13.5
AC018924_1-004	1922	1SSF_A	156	9E-086	98	1428	1582	2	156	8.1
AC018924_1-005
AC019011_1-002	3041	1C1G_D	284	0.0005	21	1601	1868	15	272	8.8
AC019011_2-001
AC019011_2-002
AC019011_2-003
AC019011_2-004
AC019011_2-005
AC019011_2-006
AC019011_2-008
AC019011_2-009
AC019011_2-012
AC019011_2-016
AC020606_1-001	715	1JXS_A	98	0.0000000000005	40	502	586	1	98	11.9
AC020606_1-004	740	1JXS_A	98	0.0000000000003	40	527	611	1	98	11.5
AC020606_1-005	692	1JXS_A	98	0.0000000000004	40	479	563	1	98	12.3
AC021607_2-001
AC021607_2-002
AC022431_2-001
AC023356_1-001
AC023356_2-001	570	1GG3_C	279	1E-056	39	19	295	3	279	48.6
AC023356_2-006	474	1GG3_C	279	8E-051	38	1	261	19	279	55.1
AC023590_2-001
AC034220_2-001	330	1V5L_A	103	2E-019	57	4	88	8	92	25.8
AC034220_2-002	246	1V5L_A	103	3E-018	57	4	88	8	92	34.6
AC034228_1-001	722	1T5D_X	504	0.000000008	25	289	615	152	434	45.3
AC034228_1-002	708	1T5D_X	504	0.00000001	25	275	601	152	434	46.2
AC034228_1-003	622	1V26_B	541	0.000000000008	23	146	500	106	452	57.1
AC034228_1-004	697	1T5D_X	504	0.00000001	25	264	590	152	434	46.9
AC034228_1-005	373	1AMU_B	563	0.00003	47	230	279	170	222	13.4
AC034228_1-008	697	1T5D_X	504	0.0000001	25	264	590	152	434	46.9
AC034228_1-009	722	1T5D_X	504	0.0000001	25	289	615	152	434	45.3
AC034228_1-011
AC034228_1-012
AC034228_5-001	152	1JLI_	112	1E-045	88	34	144	2	112	73
AC034228_6-001	144	2GMF_B	127	8E-065	100	18	144	1	127	88.2
AC051649_1-002	401	1DQV_A	296	9E-038	35	119	376	7	273	64.3
AC051649_1-004	387	1DQV_A	296	1E-037	35	105	362	7	273	66.7
AC051649_1-008	399	1DQV_A	296	1E-037	35	117	374	7	273	64.7
AC051649_2-001	182	1A2X_B	47	0.0000000004	97	2	48	1	47	25.8
AC051649_2-001	182	1VDI_A	52	0.00000000001	93	132	180	1	49	26.9
AC051649_2-002	182	1A2X_B	47	0.0000000004	97	2	48	1	47	25.8
AC051649_2-002	182	1VDI_A	52	0.00000000001	93	132	180	1	49	26.9
AC051649_2-003	182	1VDJ_A	52	0.000000000006	93	132	180	1	49	26.9
AC051649_3-001
AC051649_3-002
AC051649_3-004
AC051649_3-005
AC051649_3-006
AC051649_3-007
AC051649_3-008
AC051649_3-010
AC051649_4-001	258	1YV0_T	107	5E-025	80	150	258	1	107	42.2
AC051649_4-002	256	1YV0_T	107	9E-026	80	148	256	1	107	42.6
AC051649_4-003	250	1YV0_T	107	3E-022	73	142	250	1	107	43.6
AC051649_4-004	250	1YV0_T	107	7E-025	80	142	250	1	107	43.6
AC051649_4-006	171	1YV0_T	107	0.0003	91	136	171	1	36	21.1
AC051649_4-007	208	1YV0_T	107	3E-016	78	131	208	1	78	37.5
AC051649_4-010
AC051649_4-011
AC051649_4-012
AC051649_5-001	153	1P86_R	100	0.001	28	35	107	25	95	47.7
AC051649_5-002
AC051649_5-007	153	1P86_R	100	0.001	28	35	107	25	95	47.7
AC053503_10-001	420	1HM9_B	468	0.0000005	23	4	358	14	345	84.5
AC053503_10-002	473	1H5S_D	293	0.00001	25	1	238	3	225	50.3
AC053503_10-003	420	1HM9_B	468	0.0000005	23	4	358	14	345	84.5
AC053503_10-004	420	1HM9_B	468	0.0000005	23	4	358	14	345	84.5
AC053503_10-006	164	1H5S_D	293	0.0001	28	1	129	3	125	78.7
AC053503_10-008
AC053503_10-012	420	1HM9_B	468	0.0000005	23	4	358	14	345	84.5
AC053503_5-001	470	1GK4_F	84	2E-025