Agrobacterium tumefaciens (strain C58 / ATCC 33970)

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Species: Agrobacterium tumefaciens (strain C58 / ATCC 33970)

Species code: AGRT5

Type: Eubacteria

Taxonomy: Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium (TaxID: 176299) [NEWT / NCBI]

Strain(s): C58 / ATCC 33970

Genome: circular, 2.84 Mb; linear, 2.07 Mb; 2 plasmids of 215 Kb and

Reference(s): MEDLINE=21608550 [NCBI, ExPASy, Israel, Japan]; PubMed=11743193;
Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.;
"The genome of the natural genetic engineer Agrobacterium tumefaciens C58.";
Science 294:2317-2323(2001).

MEDLINE=21608550 [NCBI, ExPASy, Israel, Japan]; PubMed=11743193;
Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
"Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58.";
Science 294:2323-2328(2001).

Genome official sequence WWW site(s): http://cancer.lbi.ic.unicamp.br/agroC58/

Other WWW site(s): GIB (DDBJ) (Cereon)
GIB (DDBJ) (Dupont)
TIGR CMR (Cereon)
TIGR CMR (Dupont)
EBI GeneQuiz

Description: Gram-negative motile rod. Members of the genus Agrobacterium invade the crown, roots and stems of a great variety of plants via wounds causing tumors. The diseases are crown gall, hairy root, and cane gall. Some strains possess a wide host range, whereas other possess a very limited host range. The tumor is correlated with the presence of a large tumor-inducing plasmid (Ti plasmid) in the bacteria. Agrobacteria inhabit the soil.

Properties: Number of membranes : 2
Presence of a flagella : Yes
Number of inteins : 0

Genomic Proximity Viewer
Proteome analysis at EBI
Perform a BLAST search against all proteins from Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Download ftp file containing all Swiss-Prot and TrEMBL entries of this organism
- in Swiss-Prot format
- in FASTA format

Last modified 12-Apr-2003

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Species:	Agrobacterium tumefaciens (strain C58 / ATCC 33970)
Species code:	AGRT5
Type:	Eubacteria
Taxonomy:	Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium (TaxID: 176299) [NEWT / NCBI]
Strain(s):	C58 / ATCC 33970
Genome:	circular, 2.84 Mb; linear, 2.07 Mb; 2 plasmids of 215 Kb and
Reference(s):	MEDLINE=21608550 [NCBI, ExPASy, Israel, Japan]; PubMed=11743193; Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K., Zhou Y., Chen L., Wood G.E., Almeida N.F. Jr., Woo L., Chen Y., Paulsen I.T., Eisen J.A., Karp P.D., Bovee D. Sr., Chapman P., Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R., Li M.-J., McClelland E., Palmieri A., Raymond C., Rouse G., Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y., Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S., Hendrick C., Zhao Z.-Y., Dolan M., Chumley F., Tingey S.V., Tomb J.-F., Gordon M.P., Olson M.V., Nester E.W.; "The genome of the natural genetic engineer Agrobacterium tumefaciens C58."; Science 294:2317-2323(2001).
	MEDLINE=21608550 [NCBI, ExPASy, Israel, Japan]; PubMed=11743193; Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B., Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K., Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M., Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C., Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.; "Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58."; Science 294:2323-2328(2001).
Genome official sequence WWW site(s):	http://cancer.lbi.ic.unicamp.br/agroC58/
Other WWW site(s):	GIB (DDBJ) (Cereon) GIB (DDBJ) (Dupont) TIGR CMR (Cereon) TIGR CMR (Dupont) EBI GeneQuiz
Description:	Gram-negative motile rod. Members of the genus Agrobacterium invade the crown, roots and stems of a great variety of plants via wounds causing tumors. The diseases are crown gall, hairy root, and cane gall. Some strains possess a wide host range, whereas other possess a very limited host range. The tumor is correlated with the presence of a large tumor-inducing plasmid (Ti plasmid) in the bacteria. Agrobacteria inhabit the soil.
Properties:	Number of membranes : 2 Presence of a flagella : Yes Number of inteins : 0