PRATT is a tool to discover patterns that are conserved in a set of protein sequences.
The patterns are reported using the PROSITE format.
This simple interface allows the user to paste a set of sequences that are searched for patterns, using default PRATT parameters. Advanced users may modify the parameters, or are encouraged to use the more advanced EBI PRATT server.
- Jonassen I., Collins J.F. and Higgins D.;
Finding flexible patterns in unaligned protein sequences
Protein Science 4(8):1587-1595(1995)
- Jonassen I.;
Efficient discovery of conserved patterns using a pattern graph
Comput. Appl. Biosci. 13(5):509-522(1997)