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Database Category: Structure
ASTRAL
Chandonia, J. M.
1
, Walker, N.
2
, Lo Conte, L.
3
, Koehl, P.
4
, Levitt, M.
4
, Brenner, S. E.
5
Sequences of domains of known structure, selected subsets, and sequence-structure correspondences
database
summary
BioImage
Searchable database of multidimensional biological images
database
summary
BioMagResBank
NMR spectroscopic data from proteins, peptides, and nucleic acids
database
summary
CATH
Hierarchical classification of protein domain structures
database
summary
CE
CE: A Resource to Compute and Review 3-D Protein Structure Alignments
database
summary
CKAAPs DB
Structurally-similar proteins with dissimilar sequences
database
summary
CSD
Crystal structure information for organic and metal organic compounds.
database
summary
Database of Macromolecular Movements
Descriptions of protein and macromolecular motions, including movies
database
summary
Decoys 'R' Us
Computer-generated protein conformations based on sequence data
database
summary
DSDBASE
Vinayagam, A., Sowdhamini, R.
Native and modeled disulfide bonds in proteins
database
summary
GTOP
Large-scale genome projects generate an unprecedented number of protein seq
database
summary
HIC-Up
Structures of small molecules (*hetero-compounds*)
database
summary
HSSP
Structural families and alignments; structurarlly-conserved regions and domain architecture
database
summary
IMB Jena Image Library of Biological Macromolecules
Reichert, J., Suehnel, J.
Visualization and analysis of three-dimensional biopolymer structures
database
summary
ISSD
Integrated sequence and structural information
database
summary
LPFC
Library of protein family core structures
database
summary
MMDB
All experimentally-determined three-dimensional structures, linked to NCBI Entrez
database
summary
MODBASE
MODBASE (http://guitar.rockefeller.edu/modbase) is a relational database of
database
summary
NDB
Nucleic acid-containing structures
database
summary
NTDB
Thermodynamic data for nucleic acids
database
summary
PALI
Balaji, S.
1
, Sujatha, S.
1
, Aruna, S.
2
, Mhatre, S.N.
1
, Srinivasan, N.
1
Phylogeny and alignment of homologous protein structures
database
summary
PASS2
Mallika, V., Bhaduri, A., Sowdhamini, R.
Protein structural superfamilies
database
summary
PDB
Structure data determined by X-ray crystallography and NMR
database
summary
PDB-REPRDB
Noguchi, T.
1
, Mikoshiba, M.
2
, Takahashi, A.
2
, Akiyama, Y.
1
Representative protein chains, based on PDB entries
database
summary
PDBsum
Summaries and analyses of PDB structures
database
summary
PRESAGE
Smith, A.
1
, Barken, D.
1
, Levitt, M.
2
, Brenner, S. E.
1
Protein structures with experimental and predictive annotations
database
summary
ProTherm
Thermodynamic data for wild-type and mutant proteins
database
summary
RESID
Protein structure modifications
database
summary
SCOP
Lo Conte, L.
1
, Brenner, S.E.
2
, Hubbard, T.J.P.
3
, Chothia, C.
1
, Murzin, A.G.
4
Familial and structural protein relationships
database
summary
SCOR
Klosterman, P. S.
1
, Holbrook, S. R.
2
, Brenner, S. E.
1
RNA structural relationships
database
summary
SLoop
Classification of protein loops
database
summary
SUPERFAMILY
Gough, J., Chothia, C.
Assignments of proteins to structural superfamilies
database
summary
Compilation Paper
Categories List
Alphabetical List
Search Summary Papers