Nuclc. Acids. Res. OUP
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O-GLYCBASE

http://www.cbs.dtu.dk/databases/OGLYCBASE/

Contact   ramneek@cbs.dtu.dk


Database Description

Glycosylation, an important post-translational modification, affects proteins of diverse categories and subcellular locations. O-GLYCBASE is a database of glycoproteins with O-linked glycosylation sites. Entries with at least one experimentally verified O-glycosylation site have been compiled from protein sequence databases (mainly SwissProt) and literature. Each entry contains information about the glycan involved, the species, sequence, a literature reference and http-linked cross-references to other databases. The revised version 5.0 contains around 200 protein entries and over 1000 O-linked sites. Database crosslinks have been corrected and all PIR entries have been checked for accessibility, obsolete PIR references were removed. INTERPRO and Carb-bank links were added where appropriate, and links to the new Glycosuite database have been made where possible. Some earlier entries were updated in sequence or site annotation where new information was available. The O-GLYCBASE database is available through the WWW at http://www.cbs.dtu.dk/databases/OGLYCBASE/.

Category   Protein Sequence Motifs

Go to the abstract in the NAR 2000 Database Issue.

 

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